CSPI06G34030 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G34030
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 28070631 .. 28070919 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTTGTAATTGAAGCGATGGAGGTCTATTGGTTGGATGTCCTTGTTGTCGGCCTCAGTCTGTCTATGTGAATCCTTATCTCTGTCTATAAGCCTCTTATCTCTCTAAACTCTCGATCTTGGCCTTGATAAATCTACTCATAACAAAGTTCAAACATTACACTGATTTCACATCAGATTGGACATAATTATATCAAGCTTGTTTGAAGCAATTAGTGACCCAATTTCAGGAGCCAAGAAGGGCAGGGAATTTGTATTTGGTAATGATGTTATTATCAAAGCGTAA

mRNA sequence

ATGGATCTTGTAATTGAAGCGATGGAGGTCTATTGGTTGGATGTCCTTGTTGTCGGCCTCAGTCTGTCTATATTGGACATAATTATATCAAGCTTGTTTGAAGCAATTAGTGACCCAATTTCAGGAGCCAAGAAGGGCAGGGAATTTGTATTTGGTAATGATGTTATTATCAAAGCGTAA

Coding sequence (CDS)

ATGGATCTTGTAATTGAAGCGATGGAGGTCTATTGGTTGGATGTCCTTGTTGTCGGCCTCAGTCTGTCTATATTGGACATAATTATATCAAGCTTGTTTGAAGCAATTAGTGACCCAATTTCAGGAGCCAAGAAGGGCAGGGAATTTGTATTTGGTAATGATGTTATTATCAAAGCGTAA
Homology
[Close]
BLAST of CSPI06G34030 vs. TrEMBL
Match: A0A0A0KLB8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G516750 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 4.1e-22
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1 

Query: 1  MDLVIEAMEVYWLDVLVVGLSLSILDIIISSLFEAISDPISGAKKGREFVFGNDVIIKA 60
          MDLVIEAMEVYWLDVLVVGLSLSILDIIISSLFEAISDPISGAKKGREFVFGNDVIIKA
Sbjct: 1  MDLVIEAMEVYWLDVLVVGLSLSILDIIISSLFEAISDPISGAKKGREFVFGNDVIIKA 59

[Close]
BLAST of CSPI06G34030 vs. NCBI nr
Match: gi|700193963|gb|KGN49167.1| (hypothetical protein Csa_6G516750 [Cucumis sativus])

HSP 1 Score: 111.3 bits (277), Expect = 5.9e-22
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1 

Query: 1  MDLVIEAMEVYWLDVLVVGLSLSILDIIISSLFEAISDPISGAKKGREFVFGNDVIIKA 60
          MDLVIEAMEVYWLDVLVVGLSLSILDIIISSLFEAISDPISGAKKGREFVFGNDVIIKA
Sbjct: 1  MDLVIEAMEVYWLDVLVVGLSLSILDIIISSLFEAISDPISGAKKGREFVFGNDVIIKA 59

The following BLAST results are available for this feature:
BLAST of CSPI06G34030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI06G34030 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLB8_CUCSA4.1e-22100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G516750 PE=4 SV=1[more]
BLAST of CSPI06G34030 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI06G34030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193963|gb|KGN49167.1|5.9e-22100.00hypothetical protein Csa_6G516750 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G34030.1CSPI06G34030.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G34030Csa6G516750Cucumber (Chinese Long) v2cpicuB313
CSPI06G34030CsaV3_6G049530Cucumber (Chinese Long) v3cpicucB363
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G34030Bottle gourd (USVL1VR-Ls)cpilsiB430
CSPI06G34030Bottle gourd (USVL1VR-Ls)cpilsiB439
CSPI06G34030Bottle gourd (USVL1VR-Ls)cpilsiB444
CSPI06G34030Melon (DHL92) v3.6.1cpimedB447
CSPI06G34030Melon (DHL92) v3.6.1cpimedB454
CSPI06G34030Melon (DHL92) v3.6.1cpimedB496
CSPI06G34030Cucumber (Gy14) v2cgybcpiB037
CSPI06G34030Cucumber (Gy14) v2cgybcpiB287
CSPI06G34030Silver-seed gourdcarcpiB0030
CSPI06G34030Silver-seed gourdcarcpiB0672
CSPI06G34030Silver-seed gourdcarcpiB0910
CSPI06G34030Silver-seed gourdcarcpiB0971
CSPI06G34030Silver-seed gourdcarcpiB0987
CSPI06G34030Cucumber (Chinese Long) v3cpicucB310
CSPI06G34030Cucumber (Chinese Long) v3cpicucB373
CSPI06G34030Watermelon (97103) v2cpiwmbB433
CSPI06G34030Watermelon (97103) v2cpiwmbB473
CSPI06G34030Wax gourdcpiwgoB634
CSPI06G34030Wax gourdcpiwgoB642
CSPI06G34030Wild cucumber (PI 183967)cpicpiB038
CSPI06G34030Wild cucumber (PI 183967)cpicpiB188
CSPI06G34030Watermelon (97103) v1cpiwmB519
CSPI06G34030Cucumber (Gy14) v1cgycpiB028
CSPI06G34030Cucumber (Gy14) v1cgycpiB175
CSPI06G34030Cucumber (Gy14) v1cgycpiB219
CSPI06G34030Cucurbita maxima (Rimu)cmacpiB231
CSPI06G34030Cucurbita maxima (Rimu)cmacpiB426
CSPI06G34030Cucurbita maxima (Rimu)cmacpiB490
CSPI06G34030Cucurbita maxima (Rimu)cmacpiB644
CSPI06G34030Cucurbita maxima (Rimu)cmacpiB689
CSPI06G34030Cucurbita maxima (Rimu)cmacpiB893
CSPI06G34030Cucurbita moschata (Rifu)cmocpiB218
CSPI06G34030Cucurbita moschata (Rifu)cmocpiB418
CSPI06G34030Cucurbita moschata (Rifu)cmocpiB480
CSPI06G34030Cucurbita moschata (Rifu)cmocpiB517
CSPI06G34030Cucurbita moschata (Rifu)cmocpiB634
CSPI06G34030Cucurbita moschata (Rifu)cmocpiB681
CSPI06G34030Cucurbita moschata (Rifu)cmocpiB873
CSPI06G34030Cucumber (Chinese Long) v2cpicuB261
CSPI06G34030Cucumber (Chinese Long) v2cpicuB319
CSPI06G34030Melon (DHL92) v3.5.1cpimeB453
CSPI06G34030Melon (DHL92) v3.5.1cpimeB462
CSPI06G34030Melon (DHL92) v3.5.1cpimeB512
CSPI06G34030Watermelon (Charleston Gray)cpiwcgB453
CSPI06G34030Watermelon (Charleston Gray)cpiwcgB478
CSPI06G34030Watermelon (Charleston Gray)cpiwcgB482
CSPI06G34030Watermelon (97103) v1cpiwmB492
CSPI06G34030Watermelon (97103) v1cpiwmB541
CSPI06G34030Cucurbita pepo (Zucchini)cpecpiB047
CSPI06G34030Cucurbita pepo (Zucchini)cpecpiB080
CSPI06G34030Cucurbita pepo (Zucchini)cpecpiB503
CSPI06G34030Cucurbita pepo (Zucchini)cpecpiB527
CSPI06G34030Cucurbita pepo (Zucchini)cpecpiB754