CSPI06G28850 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G28850
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Cyclin family protein
Location	Chr6 : 25142428 .. 25144670 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTCCCTTCTTTCTCCTATTTCTCTCTCCCATTTCCCTTTTTTTTTTTTCTCTCCCCATAAACTCTACTTGGGCTTTCGTGGGTTTTACCAGTTAAGCTTCTCTCTACATAAATTACCCACATTCCCCTTTCTTAGATTTTTCTTCTTGTTCGAATGTACAGAGAACCCGAAGCCCAGATATGGGGTACACTACTGACCGTCTTTCTTCTTTCTCTCCTTCCAGTCTTTTCTGCCAAGAAGATGCTTCTTTCTTGACTGACGATGACCATACTCAACAACCCACTTCCCTTTCCGATCCTCTTCCCTTCTTTCTTGCCGATGATGATGATGAGTATTTTGAGATCTTAGTTTCAAGAGAGATTTTCACTGAATCTAAGACCCGTTTGCCCGTTAACGATTCCCCGGCTGCGATTCAGAGTTGGTTGAGGAGTGTCCGATTGGACGCTGTTGAGTGGATTCTTAAAGTTCGTCTTTTTTTTTTTTTTTTAATTTTTTTTAATTTTTAAACAAACCTACAATTGAACTTCATCTCTTCAATCGATTTGTGTTTATGGGTTGTTTTTGTTTTTCTGTGTTTTTTTTTGGGGATTTTATAGCTGGATTTTTCTGTGTGTCTTCTGATTCAGAGTCGGGTACTTTTTGGATTTCAATTTCATACTGCGTATCTATCCATCAGCTACTTCGATCGAGTTTTGTCAATCCGAAACCTAGTAAGCAATCTAATCCGTCAATCTGAATGTTGGGTTTTGCCGATCAAGTGCTTGGTTAATTGATTGATTGATTGTCTGTAATTGACGAACAGCAAAAGAGGTCGTGGATTTTCCGATTGTTGGCTGTGGGATGTTTGTCACTGGCTGCTAAGATGGAGGAATCTAAAACCCCTAAGTTGTCGAGCCTTCAAGTTGAGGGATTTGATATGGAAAGCAAAGCAATTCAAAGAATGGAACTGTACATTCTCAATACTTTGGGATGGAGAATGAGCTCAGTTACTCCCTTTTCTTATTTGCAGTATTTAATAAGAACGATCTTTGTCGATTACAATTGGCAAGGATTACTCTCTAAAGCTGCGAAGTTTGTAATGGCAACTGTGAAAGGTACCATCCGATCCCCCATTTCATGATTAATTGCTTCTTCATTTGCAACATCAGTTGATCTGTTCATTAAACTGAGACTTACCCTACAGAGATTAACTTGGTGGATCATAGACCATCTATTATAGCAGCTGCTTCGTTATTAGCTTCATCTGATACTCGGATGACAAGAGAACAAATGGAGCTTAAATTGAAAGCGATAACTTCATTTGGGTCTTTAGAATATGTGAGTTGTGCTAGTTTCAGATAGTTCGTAATGCATAAATCAGATTTGTTGTGCATATCTCAAATTTCTTGTTGGTTTGCTTATTTTTCTTCCTGCATTGTTGAAAAATGCAACAGGAGGATGTCTTCTTTTGCTATAATCTGATGCTAAAAACAGAGAACGAAAATGTGAAAGAAGAGTTAACTGGCACTCCATCGTCTTCAATCTGCACCACAACACCTAATATTGTTGACAACCGTTCTGCTACCTCCGCTTCTGGTACTAAGAGTAAGAGACGACTCACATTCGAGGACTCTGATCCAGATTGTCCGGAGAAGAAGATTCATCGGCCATAGCAAAACATAGTATGGTATTAATAATGAGAATCTAGGATGTTTTTCACTCCAACATTGTTGTTCGAGATAAAATTTTGTTGATCAAATGATTGGGCTACATTTTTCCTATACCCAATAAAGGATCCAGCAGTGACAGACAAGATTATAGAAATAAGGGAGAAGTAAATATGAGAGAAAGGGATAGCTATATAGCCTGGAGAAGGGAGAGAGAAGAAGAAGAAGAAGATGCTGACCTAGTGCAAAGAAAACCATCAAATTCCAAGAGAATACTTGAAGGTGACTGAAGGTTGTGGTTATTGCCAATATTTTGTCTTCATGATCACTTGTTGTTGTTGTCACTTGCTCTTTCATTATATTTATTTAATTTTGTTTTAATTCCTTCCATTATTTTTGTCATCATGATCAAGAATTTTATTGTTAAGTATCTATTGCCACCCTACCTTTTGATGGGAGGCCTGGGATGCTTTCCCCTTCTCTTTCAATACACTGGAGCTGAAAAGTTGTGCTTTCCTGTGTAACATTTTGAGCCATTTAGTAGTGTATACATAACATTAATAAGAATGTTGGAATACCTTTTGAACCACCA

mRNA sequence

ATGGGGTACACTACTGACCGTCTTTCTTCTTTCTCTCCTTCCAGTCTTTTCTGCCAAGAAGATGCTTCTTTCTTGACTGACGATGACCATACTCAACAACCCACTTCCCTTTCCGATCCTCTTCCCTTCTTTCTTGCCGATGATGATGATGAGTATTTTGAGATCTTAGTTTCAAGAGAGATTTTCACTGAATCTAAGACCCGTTTGCCCGTTAACGATTCCCCGGCTGCGATTCAGAGTTGGTTGAGGAGTGTCCGATTGGACGCTGTTGAGTGGATTCTTAAAAGTCGGGTACTTTTTGGATTTCAATTTCATACTGCGTATCTATCCATCAGCTACTTCGATCGAGTTTTGTCAATCCGAAACCTACAAAAGAGGTCGTGGATTTTCCGATTGTTGGCTGTGGGATGTTTGTCACTGGCTGCTAAGATGGAGGAATCTAAAACCCCTAAGTTGTCGAGCCTTCAAGTTGAGGGATTTGATATGGAAAGCAAAGCAATTCAAAGAATGGAACTGTACATTCTCAATACTTTGGGATGGAGAATGAGCTCAGTTACTCCCTTTTCTTATTTGCAGTATTTAATAAGAACGATCTTTGTCGATTACAATTGGCAAGGATTACTCTCTAAAGCTGCGAAGTTTGTAATGGCAACTGTGAAAGAGATTAACTTGGTGGATCATAGACCATCTATTATAGCAGCTGCTTCGTTATTAGCTTCATCTGATACTCGGATGACAAGAGAACAAATGGAGCTTAAATTGAAAGCGATAACTTCATTTGGGTCTTTAGAATATGAGGATGTCTTCTTTTGCTATAATCTGATGCTAAAAACAGAGAACGAAAATGTGAAAGAAGAGTTAACTGGCACTCCATCGTCTTCAATCTGCACCACAACACCTAATATTGTTGACAACCGTTCTGCTACCTCCGCTTCTGGTACTAAGAGTAAGAGACGACTCACATTCGAGGACTCTGATCCAGATTGTCCGGAGAAGAAGATTCATCGGCCATAG

Coding sequence (CDS)

ATGGGGTACACTACTGACCGTCTTTCTTCTTTCTCTCCTTCCAGTCTTTTCTGCCAAGAAGATGCTTCTTTCTTGACTGACGATGACCATACTCAACAACCCACTTCCCTTTCCGATCCTCTTCCCTTCTTTCTTGCCGATGATGATGATGAGTATTTTGAGATCTTAGTTTCAAGAGAGATTTTCACTGAATCTAAGACCCGTTTGCCCGTTAACGATTCCCCGGCTGCGATTCAGAGTTGGTTGAGGAGTGTCCGATTGGACGCTGTTGAGTGGATTCTTAAAAGTCGGGTACTTTTTGGATTTCAATTTCATACTGCGTATCTATCCATCAGCTACTTCGATCGAGTTTTGTCAATCCGAAACCTACAAAAGAGGTCGTGGATTTTCCGATTGTTGGCTGTGGGATGTTTGTCACTGGCTGCTAAGATGGAGGAATCTAAAACCCCTAAGTTGTCGAGCCTTCAAGTTGAGGGATTTGATATGGAAAGCAAAGCAATTCAAAGAATGGAACTGTACATTCTCAATACTTTGGGATGGAGAATGAGCTCAGTTACTCCCTTTTCTTATTTGCAGTATTTAATAAGAACGATCTTTGTCGATTACAATTGGCAAGGATTACTCTCTAAAGCTGCGAAGTTTGTAATGGCAACTGTGAAAGAGATTAACTTGGTGGATCATAGACCATCTATTATAGCAGCTGCTTCGTTATTAGCTTCATCTGATACTCGGATGACAAGAGAACAAATGGAGCTTAAATTGAAAGCGATAACTTCATTTGGGTCTTTAGAATATGAGGATGTCTTCTTTTGCTATAATCTGATGCTAAAAACAGAGAACGAAAATGTGAAAGAAGAGTTAACTGGCACTCCATCGTCTTCAATCTGCACCACAACACCTAATATTGTTGACAACCGTTCTGCTACCTCCGCTTCTGGTACTAAGAGTAAGAGACGACTCACATTCGAGGACTCTGATCCAGATTGTCCGGAGAAGAAGATTCATCGGCCATAG

Homology

[Close]

BLAST of CSPI06G28850 vs. Swiss-Prot
Match: CCD51_ARATH (Cyclin-D5-1 OS=Arabidopsis thaliana GN=CYCD5-1 PE=2 SV=2)

HSP 1 Score: 163.3 bits (412), Expect = 4.6e-39
Identity = 128/346 (36.99%), Postives = 181/346 (52.31%), Query Frame = 1


Query: 1   MGYTTDRLSSFSPSSLFCQEDASFLT-DDDHTQQPTSLSDPLPFFLADDDDEYFEILVSR 60
           MG   D L+ F      C E  S L  DDD T + +   +P  F    DD++Y   LV +
Sbjct: 1   MGEPKDSLALF-----LCHESESSLNEDDDETIERSDKQEP-HFTTTIDDEDYVADLVLK 60

Query: 61  EIFTESKTRLPVNDSPAAIQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLS 120
           E        L     P+   S   S RL A++WIL +R  FGFQ  TAY++ISYFD  L 
Sbjct: 61  E-------NLRFETLPSKTTS--SSDRLIAIDWILTTRTRFGFQHQTAYIAISYFDLFLH 120

Query: 121 IR--NLQK-RSWIFRLLAVGCLSLAAKMEESKTPKLSSL-QVEGFDMESKAIQRMELYIL 180
            R   LQK  +W  RLL+V CLSLAAKMEE   P LS   Q   F  +   I++ EL IL
Sbjct: 121 KRFIGLQKDETWAMRLLSVACLSLAAKMEERIVPGLSQYPQDHDFVFKPDVIRKTELLIL 180

Query: 181 NTLGWRMSSVTPFSYLQYLIRTIFVDYNWQG---LLSKAAKFVMATVKEINLVDHRPSII 240
           +TL W+M+ +TPF Y  Y +  I  D +      +L +++  ++A  KEI+  ++R  ++
Sbjct: 181 STLDWKMNLITPFHYFNYFLAKISQDNHSVSKDLVLLRSSDSLLALTKEISFTEYRQFVV 240

Query: 241 AA-----ASLLASSDTRMTREQMELKLKAITSFGSLEYEDVFFCYNLMLKTENENVKEEL 300
           AA     AS   SSD R+TRE++  K  +I+ + S E E+V+ CY   L+ E    ++ +
Sbjct: 241 AAVTTLLASSSTSSDIRLTREEIANKFGSISWWTSNENENVYLCYQRTLEIEE---RKHM 300

Query: 301 TGTPSSSICTTTPNIVDNRSATSASGTKSKRRLTFEDSDPDCPEKK 334
           T  P  ++    P          ASG+ +KRRL+F+DSD   P  K
Sbjct: 301 TPPPEIAVSREPP----------ASGSGAKRRLSFDDSDQSSPPAK 318

[Close]

BLAST of CSPI06G28850 vs. Swiss-Prot
Match: CCD51_ORYSJ (Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYCD5-1 PE=2 SV=2)

HSP 1 Score: 163.3 bits (412), Expect = 4.6e-39
Identity = 119/341 (34.90%), Postives = 172/341 (50.44%), Query Frame = 1


Query: 6   DRLSSFSPSSLFCQEDASFLTDDDHTQQPTSLSDPLPFFL-------ADDDDE-----YF 65
           D  S+    SL CQED++ L DD       +        L       ADD+DE     Y 
Sbjct: 5   DEYSAGCSFSLMCQEDSTDLDDDGGGGGCFAGDGRADLLLVYNAAAAADDEDEEEVEEYM 64

Query: 66  EILVSREIFTESKTRLPVNDS------------PAAIQSWLRSVRLDAVEWILKSRVLFG 125
           + LVS+E    S +    + S             AA   W    R   V+WIL++R  FG
Sbjct: 65  DHLVSKESSFCSSSSSTSSSSCCFSDAGGESAAAAAPMDWFALARRATVKWILETRGCFG 124

Query: 126 FQFHTAYLSISYFDRVLSIRNLQKR--SWIFRLLAVGCLSLAAKMEESKTPKLSSLQV-- 185
           F   TAYL+I+YFDR    R + +    W  RLLAV C+SLAAKMEE + P LS  +   
Sbjct: 125 FCHRTAYLAIAYFDRFCLRRCIDRSVMPWAARLLAVACVSLAAKMEEYRAPALSEFRAGV 184

Query: 186 --EGFDMESKAIQRMELYILNTLGWRMSSVTPFSYLQYLIRTIFVDYNWQGLLSKAAKFV 245
             +G++     I+RMEL +L+TL WRM++VTPF YL  L   +       G    +A  +
Sbjct: 185 GDDGYEFSCVCIRRMELLVLSTLDWRMAAVTPFDYLPCLSSRLRRHVGGGGGAGASAALI 244

Query: 246 MATVKEINLVDHRPSIIAAASLLASSDTRMTREQMELKLKAITSFGSLEYEDVFFCYNLM 305
            +  +  +++DHRPS +AAA++LA++   +TRE +E K+  ++    L+ EDVF CY+ M
Sbjct: 245 FSAAEAASVLDHRPSTVAAAAVLAATHGALTREALESKMSGLSPSFLLDKEDVFACYSAM 304

Query: 306 LKTENENVKEELTGT----PSSSICTTTPNIVDNRSATSAS 313
           L        +  T T     SSS C+ + +   +  AT+AS
Sbjct: 305 LSQPTSPASKSTTTTTGKRSSSSSCSESTDAASSYDATAAS 345

[Close]

BLAST of CSPI06G28850 vs. Swiss-Prot
Match: CCD52_ORYSJ (Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYCD5-2 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.7e-33
Identity = 116/347 (33.43%), Postives = 183/347 (52.74%), Query Frame = 1


Query: 15  SLFCQEDASFLTD---DDHTQQPTSLSDPLPFFLA-------DDDDEYFEILVSREIFTE 74
           SL CQED + L D   DD         D   F+ A       ++++EY E +VS+E    
Sbjct: 16  SLTCQEDGADLGDGVVDDDDD-----GDVFLFYNAVAAADDEEEEEEYVEQMVSKEASFC 75

Query: 75  SKTRLPVNDSPAAIQ--------SWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDR 134
             +   + D+ A            W R  RL AV+WIL++R  FGF   TAYL+I+YFDR
Sbjct: 76  CSSSSSLFDAAAGDGYGDGDGDGDWFRQARLAAVKWILETRGYFGFGHRTAYLAIAYFDR 135

Query: 135 VLSIRNLQKRS--WIFRLLAVGCLSLAAKMEESKTPKLSSLQVEGFDME-SKAIQRMELY 194
               R + + +  W  RLL++ C+S+AAKMEE ++P LS     G  +  S +I+RMEL 
Sbjct: 136 FCLRRRVDREAMPWAARLLSIACVSVAAKMEEYQSPALSEFDAGGGRVFCSDSIRRMELL 195

Query: 195 ILNTLGWRMSSVTPFSYLQYLIRTIFVDYNWQG------------LLSKAAKFVMATVKE 254
           +L+TLGWRM +VTPF +L      +   ++               +   A  F+ AT + 
Sbjct: 196 VLSTLGWRMGAVTPFDFLPCFSSRLHRHHHGGAGAAGHGAAAAARVALNAVGFIFATAEA 255

Query: 255 INLVDHRPSIIAAASLLASS-DTRMTREQMELKLKAITSFGSLEYEDVFFCYNLMLKTEN 314
            +++D+RPS +AAA++LA+S    +T+E +E K+  ++    ++ E+V  CY++M+   N
Sbjct: 256 GSVLDYRPSTVAAAAILAASYGAPLTKEALESKMSNLSPSCLIDKENVHACYSMMVGDMN 315

Query: 315 EN---VKEELTGTPSSSICTTTPN---IVDNRSATSA-SGTKSKRRL 321
            N    K  L  + S+ I TT+     +VD+ + T+A + T   +RL
Sbjct: 316 NNRRSSKRPLQCSDSNEITTTSTYDSVLVDDVTDTAAFAATAMNKRL 357

[Close]

BLAST of CSPI06G28850 vs. Swiss-Prot
Match: CCD12_ORYSJ (Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 7.9e-31
Identity = 97/285 (34.04%), Postives = 151/285 (52.98%), Query Frame = 1


Query: 47  DDDDEYFEILVSREIF--TESKTRLPVNDSPAAIQSWLRS---VRLDAVEWILKSRVLFG 106
           ++++E + + V  E+      ++  P  D P  ++S   +    R D+V WILK R L+G
Sbjct: 72  EEEEEVWTVDVVAELIGGEAERSHSPRADYPGRLRSGRPADLAARADSVAWILKVRELYG 131

Query: 107 FQFHTAYLSISYFDRVLSIRNLQKRSWIFRLLAVGCLSLAAKMEESKTPKLSSLQVEG-- 166
               TAYL++SY DR LS+  L    W  +LLAV CLSLAAKMEE+  P +  LQ+E   
Sbjct: 132 MLPVTAYLAVSYMDRFLSLHRLPGNGWAMQLLAVTCLSLAAKMEETLVPSILDLQMEDAR 191

Query: 167 FDMESKAIQRMELYILNTLGWRMSSVTPFSYLQYLIRTIFVDYNWQG---LLSKAAKFVM 226
           +  E + I RMEL +L+ L WR+ S+TPF+++ YL     VD N +    L+ +A +  +
Sbjct: 192 YIFEHRTIFRMELLVLDALDWRLRSITPFTFM-YLFADK-VDPNGKHIRELIHQATQVTL 251

Query: 227 ATVKEINLVDHRPSIIAAASLLASSDTRMTREQMELKLKAITSFGSLEYEDVFFCYNLML 286
           AT+ +   +DH PS IAAA++L +S   M    ++           L+ E +  CY LM 
Sbjct: 252 ATIHDTEFLDHCPSSIAAAAVLCASSEIMQLVSIDHGTLVSWRIIGLDEEAIIRCYRLMQ 311

Query: 287 K-TENENVKEELTGTPSSSICTTTPNIVDNRSATSASGTKSKRRL 321
           +   + NV  E T    ++  TT    V +    S+S    +R++
Sbjct: 312 QLISSNNVGRESTEITMATTTTTATTAVSSEEVVSSSPPSKRRKM 354

[Close]

BLAST of CSPI06G28850 vs. Swiss-Prot
Match: CCD53_ORYSJ (Cyclin-D5-3 OS=Oryza sativa subsp. japonica GN=CYCD5-3 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.0e-30
Identity = 101/337 (29.97%), Postives = 169/337 (50.15%), Query Frame = 1


Query: 14  SSLFCQEDASFL-----TDDDHT-----QQPTSLSDPLPFFLADDDDEYFEILVSREIFT 73
           S+L C+ED + L      DDD           S++D     L D DDEY  +++S+E   
Sbjct: 16  STLICREDGNDLFSADPADDDGGGGSGGDWELSIADDDHVLLMDRDDEYLALMLSKERCA 75

Query: 74  ESKTRLPVNDSPAA--IQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSIR 133
                    D      ++ W+++ R   V WI+K+   F F   TAY++++Y DR L+ R
Sbjct: 76  GGGGGGERGDEEEEEMVEEWMKNARAWCVGWIVKTNAGFRFSLKTAYVAVTYLDRFLARR 135

Query: 134 NLQK-RSWIFRLLAVGCLSLAAKMEESKTPKLSSLQVEGFDMESKAIQRMELYILNTLGW 193
            + + + W  +LL+V CLSLAAK+EE + P+L   +++ +D  S  + RMEL +L TL W
Sbjct: 136 CVDRDKEWALQLLSVACLSLAAKVEERRPPRLPEFKLDMYDCAS--LMRMELLVLTTLKW 195

Query: 194 RMSSVTPFSYLQYLIRTIFVDYNWQGLLSKAAKFVMATVKEINLVDHRPSIIAAASLLAS 253
           +M + TPFSYL         D   + ++ +A + + A++K I+ V ++PS IA A++L +
Sbjct: 196 QMITETPFSYLNCFTAKFRHDER-KAIVLRAIECIFASIKVISSVGYQPSTIALAAILIA 255

Query: 254 SDTRMTREQMELKLKAITSFGSLEYEDVFFCYNLMLKTENENVKEELTGTPSSSICTTTP 313
            +        ELK    + +  L+   V+ CYN M+  E+ ++ +  T   SS +     
Sbjct: 256 RNKETAPNLDELKSVVGSLWQQLDTGHVYSCYNKMMIQEDRSM-QSTTEVASSGVS---- 315

Query: 314 NIVDNRSATSASGTKSKRRLTFEDSDPDCPEKKIHRP 338
             V +   +  S        T  ++ PD   K++H P
Sbjct: 316 --VAHIGGSEDSAMGGANNATTLEATPDKKRKRLHSP 342

[Close]

BLAST of CSPI06G28850 vs. TrEMBL
Match: A0A0A0KLI3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495110 PE=3 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 5.1e-186
Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 1


Query: 1   MGYTTDRLSSFSPSSLFCQEDASFLTDDDHTQQPTSLSDPLPFFLADDDDEYFEILVSRE 60
           MGYTTDRLSSFSPSSLFCQEDASFLTDDDHTQQPTSLSDPLPFFLADDDDEYFEILVSRE
Sbjct: 1   MGYTTDRLSSFSPSSLFCQEDASFLTDDDHTQQPTSLSDPLPFFLADDDDEYFEILVSRE 60

Query: 61  IFTESKTRLPVNDSPAAIQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSI 120
           IFTESKTRLPVNDSPAAIQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSI
Sbjct: 61  IFTESKTRLPVNDSPAAIQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSI 120

Query: 121 RNLQKRSWIFRLLAVGCLSLAAKMEESKTPKLSSLQVEGFDMESKAIQRMELYILNTLGW 180
           RNLQKRSWIFRLLAVGCLSLAAKMEESKTPKLSSLQVEGFDMESKAIQRMELYILNTLGW
Sbjct: 121 RNLQKRSWIFRLLAVGCLSLAAKMEESKTPKLSSLQVEGFDMESKAIQRMELYILNTLGW 180

Query: 181 RMSSVTPFSYLQYLIRTIFVDYNWQGLLSKAAKFVMATVKEINLVDHRPSIIAAASLLAS 240
           RMSSVTPFSYLQYLIRTIFVDYNWQGLLSKAAKFVMATVKEINLVDHRPSIIAAASLLAS
Sbjct: 181 RMSSVTPFSYLQYLIRTIFVDYNWQGLLSKAAKFVMATVKEINLVDHRPSIIAAASLLAS 240

Query: 241 SDTRMTREQMELKLKAITSFGSLEYEDVFFCYNLMLKTENENVKEELTGTPSSSICTTTP 300
           SDTRMTREQMELKLKAITSFGSLEYEDVFFCYNLMLKTENENVKEELTGTPSSSICTTTP
Sbjct: 241 SDTRMTREQMELKLKAITSFGSLEYEDVFFCYNLMLKTENENVKEELTGTPSSSICTTTP 300

Query: 301 NIVDNRSATSASGTKSKRRLTFEDSDPDCPEKKIHRP 338
           NIVDNRSATSASGTKSKRRLTFEDSDPDCPEKKIHRP
Sbjct: 301 NIVDNRSATSASGTKSKRRLTFEDSDPDCPEKKIHRP 337

[Close]

BLAST of CSPI06G28850 vs. TrEMBL
Match: A0A0D2SI68_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G222800 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.7e-64
Identity = 145/333 (43.54%), Postives = 213/333 (63.96%), Query Frame = 1


Query: 9   SSFSPSSLFCQEDASFLTDDDHTQQPTSLSDPLPF-----FLADDDDEYFEILVSREIFT 68
           +SFS SSL C+E     T++D     T   D         F++D++DEY E+LV REI  
Sbjct: 17  TSFSCSSLLCRE-----TEEDACFSETEKEDDRSVYFKSCFVSDNEDEYIELLVQREIEI 76

Query: 69  ESKTRLPVNDSPAAIQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSIRNL 128
             KT    +DS    +SWL   RLDA++W+  +R +FGFQ HTAYLS+ YFDR LS R++
Sbjct: 77  GFKTSASFSDSKH--KSWLECARLDAIQWMFNTRAIFGFQIHTAYLSVIYFDRFLSKRSI 136

Query: 129 QK-RSWIFRLLAVGCLSLAAKMEESKTPKLSSLQVEGFDMESKAIQRMELYILNTLGWRM 188
              + W  RLL+V CLSLAAKMEE   P  S   ++ +  E+K IQ+MEL +L TL W+M
Sbjct: 137 DDGKLWAIRLLSVTCLSLAAKMEECSAPAFSEFPIQDYQFENKTIQKMELLVLTTLEWKM 196

Query: 189 SSVTPFSYLQYLIRTIFVDYNWQGLLSKAAKFVMATVKEINLVDHRPSIIAAASLLASSD 248
           SS+TPF+YL Y I   + +Y  +GL+SK  + +M+ +KEI+LVDHRPSIIAAA++LA+ D
Sbjct: 197 SSITPFAYLDYFIHKFYGEYRPKGLVSKIMQLIMSMIKEISLVDHRPSIIAAAAVLAAYD 256

Query: 249 TRMTREQMELKLKAITSFGSLEYEDVFFCYNLMLKTENENVK--EELTGTPSSSICTTTP 308
           +R+TR+ ++L +  I+ +G+LE E +F+ YN+M + E    K    +  +  SS+  ++ 
Sbjct: 257 SRLTRKSIDLNVDFISFWGTLENEHIFWSYNMMQEIEMRKSKTPSSVISSNYSSVTYSSL 316

Query: 309 NIVDNRSATSASGTKSKRRLTFEDSDPDCPEKK 334
           + ++  SA S +G  +KR+LTF +SD + P  K
Sbjct: 317 DAIETSSAVS-NGAGTKRKLTFNESDRNSPPTK 341

[Close]

BLAST of CSPI06G28850 vs. TrEMBL
Match: M5WDZ2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008396mg PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.2e-64
Identity = 154/332 (46.39%), Postives = 202/332 (60.84%), Query Frame = 1


Query: 9   SSFSPSSLFCQEDASFLTDDDHTQQPTSLSDPLPFFLADDDDEYFEILVSREIFT-ESKT 68
           SSFS SSL C ED S L   +        SDP   F+  D+DEY E LV RE     SK 
Sbjct: 8   SSFSLSSLLCHEDQSCLNQLEFESNTCIDSDPC--FVYVDEDEYVENLVRREARCFGSKG 67

Query: 69  RLPVNDSPAAIQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSIRNLQK-R 128
            +P  D  A+   WL++ RLD++EWI  +   FGFQF T YLS++YFD  LS R++   +
Sbjct: 68  FVPFTDCSASDICWLKTARLDSIEWIFNTGGNFGFQFQTVYLSVTYFDGFLSKRSIDDGK 127

Query: 129 SWIFRLLAVGCLSLAAKMEESKTPKLSSLQVEGFDMESKAIQRMELYILNTLGWRMSSVT 188
            W  RLL+V CLSLAAKMEE K P LS  QV+ ++ ESK IQRMEL +LNTL W++ S+T
Sbjct: 128 LWAIRLLSVACLSLAAKMEECKVPALSEFQVQDYNFESKVIQRMELLVLNTLEWKLGSIT 187

Query: 189 PFSYLQYLIRTIFVDYNWQGLLSKAAKFVMATVKEINLVDHRPSIIAAASLLASSDTRMT 248
           PF+YL Y I     +   +GL S A + ++A  KEI+L+D RPSIIAAA++LA+SD ++T
Sbjct: 188 PFAYLHYFINKFCAESRPKGLFSGAIRLIVAMAKEIDLMDTRPSIIAAAAVLAASDGQLT 247

Query: 249 REQMELKLKAITSFGSLE-YEDVFFCYNLMLKTENENVKEELTGTPSSSICTTTPNIVDN 308
           R+ +ELK+  ++   S E YE +F CYN M     E V+ +    P  SI  +   I  +
Sbjct: 248 RKMLELKMSVVSFLQSQENYEHIFSCYNHM----QEMVERKDKTPPKFSISPSVLAIHSS 307

Query: 309 RSATSASGTKSKRRLTFEDSDPDCPEKKIHRP 338
                 +   +KRRLTF DSD  CP KK HRP
Sbjct: 308 SMDVLENSVGTKRRLTFSDSDHSCPTKKNHRP 333

[Close]

BLAST of CSPI06G28850 vs. TrEMBL
Match: A0A0B0MZI9_GOSAR (Cyclin-D5-1-like protein OS=Gossypium arboreum GN=F383_34676 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.9e-64
Identity = 146/333 (43.84%), Postives = 213/333 (63.96%), Query Frame = 1


Query: 9   SSFSPSSLFCQEDASFLTDDDHTQQPTSLSDPLPF-----FLADDDDEYFEILVSREIFT 68
           +SFS SSL C+E     T++D     T   D         F++D++DEY E+LV REI  
Sbjct: 17  TSFSCSSLLCRE-----TEEDACFPETEKEDDRSVYFKSCFVSDNEDEYIEMLVQREIEI 76

Query: 69  ESKTRLPVNDSPAAIQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSIRNL 128
             KT    +DS   ++SWL   RLDA++W+  +R +FGFQ HTAYLS+ YFDR LS R++
Sbjct: 77  GFKTSASFSDSK--LKSWLECARLDAIQWMFNTRAIFGFQIHTAYLSVIYFDRFLSKRSI 136

Query: 129 QK-RSWIFRLLAVGCLSLAAKMEESKTPKLSSLQVEGFDMESKAIQRMELYILNTLGWRM 188
              + W  RLL+V CLSLAAKMEE   P  S   ++ +  ++K IQ+MEL +L TL W+M
Sbjct: 137 DDGKLWAIRLLSVTCLSLAAKMEECSAPAFSEFPIQDYQFKNKTIQKMELLVLTTLEWKM 196

Query: 189 SSVTPFSYLQYLIRTIFVDYNWQGLLSKAAKFVMATVKEINLVDHRPSIIAAASLLASSD 248
           SS+TPF+YL Y I   + +Y  +GL+SK  + +M+ +KEI+LVDHRPSIIAAA++LA+ D
Sbjct: 197 SSITPFAYLDYFIHKFYGEYRPKGLVSKIMQLIMSMIKEISLVDHRPSIIAAAAVLAAYD 256

Query: 249 TRMTREQMELKLKAITSFGSLEYEDVFFCYNLMLKTENENVKEELTGTPSSSICTTTPNI 308
           +R+TR+ ++L +  I+ +G+LE E +F+ YN+M + E    K   T   SS+  + T + 
Sbjct: 257 SRLTRKSIDLNVDFISFWGTLENEHIFWSYNMMQEIEMRKSKTP-TSVISSNYSSVTYSS 316

Query: 309 VDNRSATSA--SGTKSKRRLTFEDSDPDCPEKK 334
           +D    +SA  +G  +KR+LTF +SD + P  K
Sbjct: 317 LDAIETSSAVSNGAGTKRKLTFNESDRNSPPAK 341

[Close]

BLAST of CSPI06G28850 vs. TrEMBL
Match: A8Y915_POPTR (D5-type cyclin OS=Populus trichocarpa GN=CYCD5;1 PE=2 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.9e-64
Identity = 152/334 (45.51%), Postives = 213/334 (63.77%), Query Frame = 1


Query: 9   SSFSPSSLFCQEDASFLTDDDHTQQPTSLSDPLPFFLADDDD-EYFEILVSREIFTES-K 68
           +S S SSL C E+ S   +D  +       D   F L  + D EY E LV RE  T   +
Sbjct: 6   NSLSLSSLLCHENESCFFNDSISDHSNIKHDRSRFGLETEVDVEYVEKLVERETITFGYR 65

Query: 69  TRLPVNDSPAAIQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSIRNLQK- 128
                +D      +WL+  RLDA+EWIL +R ++GF+FHTAYLS++YFDR +S R++ + 
Sbjct: 66  CHASFDDCLITSHNWLKFARLDAIEWILNTRAIYGFRFHTAYLSVTYFDRFVSKRSIDEG 125

Query: 129 RSWIFRLLAVGCLSLAAKMEESKTPKLSSLQVEGFDMESKAIQRMELYILNTLGWRMSSV 188
           + W  RLL+V CLSLAAKMEE K P LS   VE +   +K IQRMEL +LNTL WRM+S+
Sbjct: 126 KLWAIRLLSVACLSLAAKMEERKVPPLSEFPVEDYCFGNKVIQRMELLVLNTLEWRMNSI 185

Query: 189 TPFSYLQYLIRTIFVDYNWQGLLSKAAKFVMATVKEINLVDHRPSIIAAASLLASSDTRM 248
           TPF+YL Y I     +   +  +S+A + ++A +KEI+L+DHRPSIIAAA++LA+S+ ++
Sbjct: 186 TPFAYLHYFIHKTCGESTPKETVSRAVELIVAMIKEIDLLDHRPSIIAAAAVLAASNRQL 245

Query: 249 TREQMELKLKAITSFGSLEYEDVFFCYNLMLKTENENVK-EELTGTP-SSSICTTTPNIV 308
           TR+++ELK+  I+S+GSLE E+VF CY  M + E    K   L   P SS+I + + +++
Sbjct: 246 TRKELELKMDMISSWGSLENENVFSCYIAMQEIEMGKAKTPRLVFYPNSSAIHSGSFDVL 305

Query: 309 DNRSATSASGTKSKRRLTFEDSDPDCPEKKIHRP 338
           +N S  S +G   KR LTF + D  CP KKI RP
Sbjct: 306 ENSSLVSGAGI--KRSLTFNECDQTCPAKKICRP 337

[Close]

BLAST of CSPI06G28850 vs. TAIR10
Match: AT4G37630.1 (AT4G37630.1 cyclin d5;1)

HSP 1 Score: 163.3 bits (412), Expect = 2.6e-40
Identity = 128/346 (36.99%), Postives = 181/346 (52.31%), Query Frame = 1


Query: 1   MGYTTDRLSSFSPSSLFCQEDASFLT-DDDHTQQPTSLSDPLPFFLADDDDEYFEILVSR 60
           MG   D L+ F      C E  S L  DDD T + +   +P  F    DD++Y   LV +
Sbjct: 1   MGEPKDSLALF-----LCHESESSLNEDDDETIERSDKQEP-HFTTTIDDEDYVADLVLK 60

Query: 61  EIFTESKTRLPVNDSPAAIQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLS 120
           E        L     P+   S   S RL A++WIL +R  FGFQ  TAY++ISYFD  L 
Sbjct: 61  E-------NLRFETLPSKTTS--SSDRLIAIDWILTTRTRFGFQHQTAYIAISYFDLFLH 120

Query: 121 IR--NLQK-RSWIFRLLAVGCLSLAAKMEESKTPKLSSL-QVEGFDMESKAIQRMELYIL 180
            R   LQK  +W  RLL+V CLSLAAKMEE   P LS   Q   F  +   I++ EL IL
Sbjct: 121 KRFIGLQKDETWAMRLLSVACLSLAAKMEERIVPGLSQYPQDHDFVFKPDVIRKTELLIL 180

Query: 181 NTLGWRMSSVTPFSYLQYLIRTIFVDYNWQG---LLSKAAKFVMATVKEINLVDHRPSII 240
           +TL W+M+ +TPF Y  Y +  I  D +      +L +++  ++A  KEI+  ++R  ++
Sbjct: 181 STLDWKMNLITPFHYFNYFLAKISQDNHSVSKDLVLLRSSDSLLALTKEISFTEYRQFVV 240

Query: 241 AA-----ASLLASSDTRMTREQMELKLKAITSFGSLEYEDVFFCYNLMLKTENENVKEEL 300
           AA     AS   SSD R+TRE++  K  +I+ + S E E+V+ CY   L+ E    ++ +
Sbjct: 241 AAVTTLLASSSTSSDIRLTREEIANKFGSISWWTSNENENVYLCYQRTLEIEE---RKHM 300

Query: 301 TGTPSSSICTTTPNIVDNRSATSASGTKSKRRLTFEDSDPDCPEKK 334
           T  P  ++    P          ASG+ +KRRL+F+DSD   P  K
Sbjct: 301 TPPPEIAVSREPP----------ASGSGAKRRLSFDDSDQSSPPAK 318

[Close]

BLAST of CSPI06G28850 vs. TAIR10
Match: AT2G22490.2 (AT2G22490.2 Cyclin D2;1)

HSP 1 Score: 121.7 bits (304), Expect = 8.6e-28
Identity = 84/209 (40.19%), Postives = 123/209 (58.85%), Query Frame = 1


Query: 84  SVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSIRNLQK-RSWIFRLLAVGCLSLAA 143
           SVR  A++WILK    + F      LS++Y DR L+   L K + W  +LLAV CLSLA+
Sbjct: 95  SVRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLAS 154

Query: 144 KMEESKTPKLSSLQVEG--FDMESKAIQRMELYILNTLGWRMSSVTPFSYLQYLIRTIFV 203
           KMEE+  P +  LQVE   F  E+K I+RMEL ++ TL WR+ ++TPFS++ Y +  I  
Sbjct: 155 KMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKISG 214

Query: 204 DYNWQGLLSKAAKFVMATVKEINLVDHRPSIIAAA---SLLASSDTRMTREQMELKLKAI 263
             + + L+ ++++F++ T K I  +D RPS IAAA   S+  S +T    E+     KA+
Sbjct: 215 HVS-ENLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGETECIDEE-----KAL 274

Query: 264 TSFGSL-EYEDVFFCYNLMLK-TENENVK 285
           +S   + + E V  C NLM   T  ENV+
Sbjct: 275 SSLIYVKQQERVKRCLNLMRSLTGEENVR 297

[Close]

BLAST of CSPI06G28850 vs. TAIR10
Match: AT5G67260.1 (AT5G67260.1 CYCLIN D3;2)

HSP 1 Score: 120.2 bits (300), Expect = 2.5e-27
Identity = 89/279 (31.90%), Postives = 146/279 (52.33%), Query Frame = 1


Query: 16  LFCQEDASFLTDD-------------DHTQQPTSLSDPLPFFLADDDDEYFEILVSREIF 75
           L+C+E+  F+ DD             D +         L  FL DDD+     L+S+E  
Sbjct: 21  LYCEEETGFVEDDLDDDGDLDFLEKSDESVVKFQFLPLLDMFLWDDDE--ILSLISKENE 80

Query: 76  TESKTRLPVNDSPAAIQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSIRN 135
           T       + D       +L S R +A++W+L+ +  +GF   TA L+++YFDR ++   
Sbjct: 81  TNPCFGEQILDG------FLVSCRKEALDWVLRVKSHYGFTSLTAILAVNYFDRFMTSIK 140

Query: 136 LQK-RSWIFRLLAVGCLSLAAKMEESKTPKLSSLQVEG--FDMESKAIQRMELYILNTLG 195
           LQ  + W+ +L+AV  LSLAAK+EE + P L  LQVE   +  E+K IQRMEL IL+TL 
Sbjct: 141 LQTDKPWMSQLVAVASLSLAAKVEEIQVPLLLDLQVEEARYLFEAKTIQRMELLILSTLQ 200

Query: 196 WRMSSVTPFSYLQYLIRTIFVDYNWQ-GLLSKAAKFVMATVKEINLVDHRPSIIAAASLL 255
           WRM  VTP S+  ++IR     ++ Q     K  + +++ + +   + + PS++A A ++
Sbjct: 201 WRMHPVTPISFFDHIIRRFGSKWHQQLDFCRKCERLLISVIADTRFMRYFPSVLATAIMI 260

Query: 256 ASSDTRMTREQMELKLKAITSFGSLEYEDVFFCYNLMLK 278
              +     +++E +   IT+   +  E V  CY L+L+
Sbjct: 261 LVFEELKPCDEVEYQ-SQITTLLKVNQEKVNECYELLLE 290

[Close]

BLAST of CSPI06G28850 vs. TAIR10
Match: AT1G70210.1 (AT1G70210.1 CYCLIN D1;1)

HSP 1 Score: 118.6 bits (296), Expect = 7.3e-27
Identity = 102/318 (32.08%), Postives = 156/318 (49.06%), Query Frame = 1


Query: 16  LFCQEDASFLTDDDHTQQPTSLSDPLP---FFLADDDDEYFEILVSREIFTESKTRLPVN 75
           LFC ED+   + +      +S  D  P        +D+ +F  +   +  +  +TR    
Sbjct: 22  LFCGEDSGVFSGESTVDFSSSEVDSWPGDSIACFIEDERHF--VPGHDYLSRFQTR---- 81

Query: 76  DSPAAIQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSIRNLQKRS-WIFR 135
                  S   S R D+V WILK +  + FQ  TAYL+++Y DR L  R L + S W  +
Sbjct: 82  -------SLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQ 141

Query: 136 LLAVGCLSLAAKMEESKTPKLSSLQVEG--FDMESKAIQRMELYILNTLGWRMSSVTPFS 195
           LLAV CLSLAAKMEE   P L   QV G  +  E+K I+RMEL +L+ L WR+ SVTPF 
Sbjct: 142 LLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFD 201

Query: 196 YLQYLIRTIFVDYNWQG-LLSKAAKFVMATVKEINLVDHRPSIIAAASLL-ASSDTRMTR 255
           ++ +    I     + G  +S A + +++ +KE + +++ PS IAAA++L  +++     
Sbjct: 202 FISFFAYKIDPSGTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAILCVANELPSLS 261

Query: 256 EQMELKLKAITSFGSLEYEDVFFCYNLMLKTENEN-------VKEELTGTPSSSICTTTP 315
             +       T    L  E +  CY LM     EN       V  +L  +  +S   T P
Sbjct: 262 SVVNPHESPETWCDGLSKEKIVRCYRLMKAMAIENNRLNTPKVIAKLRVSVRASSTLTRP 321

Query: 316 NIVDNRSATSASGTKSKR 319
           +  D  S +S+S  K ++
Sbjct: 322 S--DESSFSSSSPCKRRK 324

[Close]

BLAST of CSPI06G28850 vs. TAIR10
Match: AT4G34160.1 (AT4G34160.1 CYCLIN D3;1)

HSP 1 Score: 117.1 bits (292), Expect = 2.1e-26
Identity = 84/278 (30.22%), Postives = 155/278 (55.76%), Query Frame = 1


Query: 6   DRLSSFSPSSLFCQEDASFLTDDDHTQQPTSLSDPLPFFLADDDDEYFEILVSREIFT-E 65
           ++ +SF   +L+C+E+  +  + +  ++ +SLS     F+    D ++E      +F+ E
Sbjct: 12  EQSNSFLLDALYCEEE-KWDDEGEEVEENSSLSSSSSPFVVLQQDLFWEDEDLVTLFSKE 71

Query: 66  SKTRLPVNDSPAAIQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSIRNLQ 125
            +  L   D       +L + R +AV WIL+    +GF    A L+I+Y D+ +   +LQ
Sbjct: 72  EEQGLSCLDDV-----YLSTDRKEAVGWILRVNAHYGFSTLAAVLAITYLDKFICSYSLQ 131

Query: 126 K-RSWIFRLLAVGCLSLAAKMEESKTPKLSSLQVEG--FDMESKAIQRMELYILNTLGWR 185
           + + W+ +L++V CLSLAAK+EE++ P L   QVE   +  E+K IQRMEL IL+TL W+
Sbjct: 132 RDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEAKTIQRMELLILSTLEWK 191

Query: 186 MSSVTPFSYLQYLIRTIFVDYN--WQGLLSKAAKFVMATVKEINLVDHRPSIIAAASLLA 245
           M  +TP S++ ++IR + +  N  W   L+K  + +++ + +   V + PS++AAA+++ 
Sbjct: 192 MHLITPISFVDHIIRRLGLKNNAHWD-FLNKCHRLLLSVISDSRFVGYLPSVVAAATMMR 251

Query: 246 SSDTRMTREQMELKLKAITSFGSLEYEDVFFCYNLMLK 278
             +     + +  +   +    +L  E V  CY+L+L+
Sbjct: 252 IIEQVDPFDPLSYQTNLLGVL-NLTKEKVKTCYDLILQ 281

[Close]

BLAST of CSPI06G28850 vs. NCBI nr
Match: gi|449448228|ref|XP_004141868.1| (PREDICTED: cyclin-D5-1-like [Cucumis sativus])

HSP 1 Score: 658.3 bits (1697), Expect = 7.3e-186
Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 1


Query: 1   MGYTTDRLSSFSPSSLFCQEDASFLTDDDHTQQPTSLSDPLPFFLADDDDEYFEILVSRE 60
           MGYTTDRLSSFSPSSLFCQEDASFLTDDDHTQQPTSLSDPLPFFLADDDDEYFEILVSRE
Sbjct: 1   MGYTTDRLSSFSPSSLFCQEDASFLTDDDHTQQPTSLSDPLPFFLADDDDEYFEILVSRE 60

Query: 61  IFTESKTRLPVNDSPAAIQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSI 120
           IFTESKTRLPVNDSPAAIQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSI
Sbjct: 61  IFTESKTRLPVNDSPAAIQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSI 120

Query: 121 RNLQKRSWIFRLLAVGCLSLAAKMEESKTPKLSSLQVEGFDMESKAIQRMELYILNTLGW 180
           RNLQKRSWIFRLLAVGCLSLAAKMEESKTPKLSSLQVEGFDMESKAIQRMELYILNTLGW
Sbjct: 121 RNLQKRSWIFRLLAVGCLSLAAKMEESKTPKLSSLQVEGFDMESKAIQRMELYILNTLGW 180

Query: 181 RMSSVTPFSYLQYLIRTIFVDYNWQGLLSKAAKFVMATVKEINLVDHRPSIIAAASLLAS 240
           RMSSVTPFSYLQYLIRTIFVDYNWQGLLSKAAKFVMATVKEINLVDHRPSIIAAASLLAS
Sbjct: 181 RMSSVTPFSYLQYLIRTIFVDYNWQGLLSKAAKFVMATVKEINLVDHRPSIIAAASLLAS 240

Query: 241 SDTRMTREQMELKLKAITSFGSLEYEDVFFCYNLMLKTENENVKEELTGTPSSSICTTTP 300
           SDTRMTREQMELKLKAITSFGSLEYEDVFFCYNLMLKTENENVKEELTGTPSSSICTTTP
Sbjct: 241 SDTRMTREQMELKLKAITSFGSLEYEDVFFCYNLMLKTENENVKEELTGTPSSSICTTTP 300

Query: 301 NIVDNRSATSASGTKSKRRLTFEDSDPDCPEKKIHRP 338
           NIVDNRSATSASGTKSKRRLTFEDSDPDCPEKKIHRP
Sbjct: 301 NIVDNRSATSASGTKSKRRLTFEDSDPDCPEKKIHRP 337

[Close]

BLAST of CSPI06G28850 vs. NCBI nr
Match: gi|659079679|ref|XP_008440384.1| (PREDICTED: cyclin-D5-1-like [Cucumis melo])

HSP 1 Score: 646.7 bits (1667), Expect = 2.2e-182
Identity = 330/337 (97.92%), Postives = 334/337 (99.11%), Query Frame = 1


Query: 1   MGYTTDRLSSFSPSSLFCQEDASFLTDDDHTQQPTSLSDPLPFFLADDDDEYFEILVSRE 60
           MGYTTDRLSSFSPSSLFCQEDASFLTDDDHTQQPTSLSDPLPFFLADDDDEYFEILVSRE
Sbjct: 1   MGYTTDRLSSFSPSSLFCQEDASFLTDDDHTQQPTSLSDPLPFFLADDDDEYFEILVSRE 60

Query: 61  IFTESKTRLPVNDSPAAIQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSI 120
           I TESKTRLP+NDSPAAIQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSI
Sbjct: 61  ILTESKTRLPLNDSPAAIQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSI 120

Query: 121 RNLQKRSWIFRLLAVGCLSLAAKMEESKTPKLSSLQVEGFDMESKAIQRMELYILNTLGW 180
           RNLQKRSWIFRLLAVGCLSLAAKMEESKTPKLSSLQVEGFDMESKAIQRMELYILNTLGW
Sbjct: 121 RNLQKRSWIFRLLAVGCLSLAAKMEESKTPKLSSLQVEGFDMESKAIQRMELYILNTLGW 180

Query: 181 RMSSVTPFSYLQYLIRTIFVDYNWQGLLSKAAKFVMATVKEINLVDHRPSIIAAASLLAS 240
           RMSSVTPFSYLQYLIRTIFVDYNWQGLLSKAA FVMATVKEINLVDHRPSIIAAASLLAS
Sbjct: 181 RMSSVTPFSYLQYLIRTIFVDYNWQGLLSKAANFVMATVKEINLVDHRPSIIAAASLLAS 240

Query: 241 SDTRMTREQMELKLKAITSFGSLEYEDVFFCYNLMLKTENENVKEELTGTPSSSICTTTP 300
           SDT+MTREQMELKLKAITSFGSLEYED+FFCY+LMLKTE ENVKEELTGTPSSSICTTTP
Sbjct: 241 SDTQMTREQMELKLKAITSFGSLEYEDIFFCYSLMLKTEKENVKEELTGTPSSSICTTTP 300

Query: 301 NIVDNRSATSASGTKSKRRLTFEDSDPDCPEKKIHRP 338
           NIVDNRSATSASGTKSKRRLTFEDSDPDCPEKKIHRP
Sbjct: 301 NIVDNRSATSASGTKSKRRLTFEDSDPDCPEKKIHRP 337

[Close]

BLAST of CSPI06G28850 vs. NCBI nr
Match: gi|720098544|ref|XP_010247660.1| (PREDICTED: cyclin-D5-1-like [Nelumbo nucifera])

HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69
Identity = 155/327 (47.40%), Postives = 217/327 (66.36%), Query Frame = 1


Query: 6   DRLSSFSPSSLFCQEDASFLTDDDHTQQPTSLSDPLPFFLADDDDEYFEILVSREIFTES 65
           D  SSFS S+L CQE+   L  + +     +L++  P+  ++ ++EY E+LV RE    S
Sbjct: 3   DSGSSFSLSNLLCQENEGCLDGEVYEDVFLNLNN-YPY--SETEEEYIEMLVERENSFGS 62

Query: 66  KTRLPVNDSPAAIQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSIRNLQK 125
           K     ND     +SWL+  RLDA++WI K+R  FGF+F TAYLS++YFD+ LS R + +
Sbjct: 63  KCHESTNDYSMMNESWLKCARLDAIQWIFKTRAYFGFRFQTAYLSVTYFDQFLSRRTIDR 122

Query: 126 -RSWIFRLLAVGCLSLAAKMEESKTPKLSSLQVEGFDMESKAIQRMELYILNTLGWRMSS 185
            +SW  +LL+V CLSLAAK+EE K P LS  +VE  + ESK IQRMEL +LNTL WRM S
Sbjct: 123 GKSWAIQLLSVACLSLAAKLEECKVPALSEFRVEECNFESKIIQRMELLVLNTLEWRMGS 182

Query: 186 VTPFSYLQYLIRTIFVDYNWQGLLSKAAKFVMATVKEINLVDHRPSIIAAASLLASSDTR 245
           +TPF+Y  Y I     +Y  + L+S+A + V+A +KE+NL+DHRPS IAAA++LA+ D R
Sbjct: 183 ITPFAYFHYFINKFCEEYRPKHLVSRAVELVLAIIKEMNLMDHRPSAIAAAAVLAAMDQR 242

Query: 246 MTREQMELKLKAITSFGSLEYEDVFFCYNLM--LKTENENVKEELTGTPSSSICTTTPNI 305
           +TR+ +E K+ +++S GSLE E VF CYNLM  L+     +   +     SSI TT+ ++
Sbjct: 243 LTRKTIEFKMSSVSSCGSLENEHVFSCYNLMQDLEMGKLRIPRLVISLDISSIYTTSTDV 302

Query: 306 VDNRSATSASGTKSKRRLTFEDSDPDC 330
           V++ S TSA  TK +RRLTF DSD +C
Sbjct: 303 VEDSSLTSAVDTK-RRRLTFNDSDENC 325

[Close]

BLAST of CSPI06G28850 vs. NCBI nr
Match: gi|1000953452|ref|XP_015578531.1| (PREDICTED: cyclin-D5-1 [Ricinus communis])

HSP 1 Score: 271.6 bits (693), Expect = 1.9e-69
Identity = 157/338 (46.45%), Postives = 227/338 (67.16%), Query Frame = 1


Query: 9   SSFSPSSLFCQED-ASFLTDDDHTQQ----PTSLSDPLPFFLADDDDEYFEILVSREIFT 68
           +S S SSL CQED AS   +++  Q+     +S S    F L +++ EY E +V  E   
Sbjct: 6   NSLSLSSLLCQEDDASCFNENNSFQELNFESSSSSSSSCFVLENEEIEYIEKMVEME--- 65

Query: 69  ESKTRLPVNDSPAAIQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSIRNL 128
            S++    +DS  A  SWLR  RLDA++WI  +R +FGF+FHTAYLS++YFDR LS R++
Sbjct: 66  -SRSFTCSDDSSFANYSWLRCARLDAIDWIFNTRAIFGFRFHTAYLSVTYFDRFLSKRSI 125

Query: 129 QK-RSWIFRLLAVGCLSLAAKMEESKTPKLSSLQVEGFDMESKAIQRMELYILNTLGWRM 188
              + W  RLL+V CLSLAAKMEE + P LS   +E +  E+K IQRMEL + NTL W+M
Sbjct: 126 DDGKLWAIRLLSVACLSLAAKMEECRVPPLSEFPIEDYCFENKVIQRMELLVXNTLEWKM 185

Query: 189 SSVTPFSYLQYLIRTIFVDYNWQGLLSKAAKFVMATVKEINLVDHRPSIIAAASLLASSD 248
            S+TPFSYL Y I  I  +   +  +S+A + ++A +KEINL+DHRPSIIA A++LA+SD
Sbjct: 186 GSITPFSYLHYFINKICGESRQKETVSRAGELIVAVIKEINLLDHRPSIIAMAAVLAASD 245

Query: 249 TRMTREQMELKLKAITSFGSLEYEDVFFCYNLMLKTENENVK--EELTGTPSSSICTTTP 308
            ++TR+++ELK+K I+S+GSL+ E +F CY +M + E   +K  +++    SSSI +T+ 
Sbjct: 246 NQLTRQELELKMKVISSWGSLQNEHIFSCYIVMQEIEMGKLKTPKQVISPNSSSIHSTSM 305

Query: 309 NIVDNRSATSASGTKSKRRLTFEDSDPDCPEKKI-HRP 338
            +++N S+T+  G  +KRRLT+ D D +CP KKI H+P
Sbjct: 306 ALLENSSSTT-FGAGTKRRLTYNDCDQNCPVKKICHQP 338

[Close]

BLAST of CSPI06G28850 vs. NCBI nr
Match: gi|823193064|ref|XP_012491958.1| (PREDICTED: cyclin-D5-1-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 254.6 bits (649), Expect = 2.4e-64
Identity = 145/333 (43.54%), Postives = 213/333 (63.96%), Query Frame = 1


Query: 9   SSFSPSSLFCQEDASFLTDDDHTQQPTSLSDPLPF-----FLADDDDEYFEILVSREIFT 68
           +SFS SSL C+E     T++D     T   D         F++D++DEY E+LV REI  
Sbjct: 17  TSFSCSSLLCRE-----TEEDACFSETEKEDDRSVYFKSCFVSDNEDEYIELLVQREIEI 76

Query: 69  ESKTRLPVNDSPAAIQSWLRSVRLDAVEWILKSRVLFGFQFHTAYLSISYFDRVLSIRNL 128
             KT    +DS    +SWL   RLDA++W+  +R +FGFQ HTAYLS+ YFDR LS R++
Sbjct: 77  GFKTSASFSDSKH--KSWLECARLDAIQWMFNTRAIFGFQIHTAYLSVIYFDRFLSKRSI 136

Query: 129 QK-RSWIFRLLAVGCLSLAAKMEESKTPKLSSLQVEGFDMESKAIQRMELYILNTLGWRM 188
              + W  RLL+V CLSLAAKMEE   P  S   ++ +  E+K IQ+MEL +L TL W+M
Sbjct: 137 DDGKLWAIRLLSVTCLSLAAKMEECSAPAFSEFPIQDYQFENKTIQKMELLVLTTLEWKM 196

Query: 189 SSVTPFSYLQYLIRTIFVDYNWQGLLSKAAKFVMATVKEINLVDHRPSIIAAASLLASSD 248
           SS+TPF+YL Y I   + +Y  +GL+SK  + +M+ +KEI+LVDHRPSIIAAA++LA+ D
Sbjct: 197 SSITPFAYLDYFIHKFYGEYRPKGLVSKIMQLIMSMIKEISLVDHRPSIIAAAAVLAAYD 256

Query: 249 TRMTREQMELKLKAITSFGSLEYEDVFFCYNLMLKTENENVK--EELTGTPSSSICTTTP 308
           +R+TR+ ++L +  I+ +G+LE E +F+ YN+M + E    K    +  +  SS+  ++ 
Sbjct: 257 SRLTRKSIDLNVDFISFWGTLENEHIFWSYNMMQEIEMRKSKTPSSVISSNYSSVTYSSL 316

Query: 309 NIVDNRSATSASGTKSKRRLTFEDSDPDCPEKK 334
           + ++  SA S +G  +KR+LTF +SD + P  K
Sbjct: 317 DAIETSSAVS-NGAGTKRKLTFNESDRNSPPTK 341

The following BLAST results are available for this feature:

BLAST of CSPI06G28850 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CCD51_ARATH	4.6e-39	36.99	Cyclin-D5-1 OS=Arabidopsis thaliana GN=CYCD5-1 PE=2 SV=2	[more]
CCD51_ORYSJ	4.6e-39	34.90	Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYCD5-1 PE=2 SV=2	[more]
CCD52_ORYSJ	1.7e-33	33.43	Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYCD5-2 PE=2 SV=1	[more]
CCD12_ORYSJ	7.9e-31	34.04	Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2	[more]
CCD53_ORYSJ	1.0e-30	29.97	Cyclin-D5-3 OS=Oryza sativa subsp. japonica GN=CYCD5-3 PE=2 SV=1	[more]

BLAST of CSPI06G28850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLI3_CUCSA	5.1e-186	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495110 PE=3 SV=1	[more]
A0A0D2SI68_GOSRA	1.7e-64	43.54	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G222800 PE=3 SV=1	[more]
M5WDZ2_PRUPE	2.2e-64	46.39	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008396mg PE=3 SV=1	[more]
A0A0B0MZI9_GOSAR	2.9e-64	43.84	Cyclin-D5-1-like protein OS=Gossypium arboreum GN=F383_34676 PE=3 SV=1	[more]
A8Y915_POPTR	2.9e-64	45.51	D5-type cyclin OS=Populus trichocarpa GN=CYCD5;1 PE=2 SV=1	[more]

BLAST of CSPI06G28850 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G37630.1	2.6e-40	36.99	cyclin d5;1	[more]
AT2G22490.2	8.6e-28	40.19	Cyclin D2;1	[more]
AT5G67260.1	2.5e-27	31.90	CYCLIN D3;2	[more]
AT1G70210.1	7.3e-27	32.08	CYCLIN D1;1	[more]
AT4G34160.1	2.1e-26	30.22	CYCLIN D3;1	[more]

BLAST of CSPI06G28850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449448228\|ref\|XP_004141868.1\|	7.3e-186	100.00	PREDICTED: cyclin-D5-1-like [Cucumis sativus]	[more]
gi\|659079679\|ref\|XP_008440384.1\|	2.2e-182	97.92	PREDICTED: cyclin-D5-1-like [Cucumis melo]	[more]
gi\|720098544\|ref\|XP_010247660.1\|	1.1e-69	47.40	PREDICTED: cyclin-D5-1-like [Nelumbo nucifera]	[more]
gi\|1000953452\|ref\|XP_015578531.1\|	1.9e-69	46.45	PREDICTED: cyclin-D5-1 [Ricinus communis]	[more]
gi\|823193064\|ref\|XP_012491958.1\|	2.4e-64	43.54	PREDICTED: cyclin-D5-1-like isoform X1 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004367	Cyclin_C-dom
IPR006671	Cyclin_N
IPR013763	Cyclin-like

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051726	regulation of cell cycle
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G28850.1	CSPI06G28850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004367	Cyclin, C-terminal domain	PFAM	PF02984	Cyclin_C	coord: 185..286 score: 3.
IPR004367	Cyclin, C-terminal domain	SMART	SM01332	Cyclin_C_2	coord: 185..301 score: 2.
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 76..182 score: 7.4
IPR006671	Cyclin, N-terminal	PROSITE	PS00292	CYCLINS	coord: 86..117 scor
IPR013763	Cyclin-like	GENE3D	G3DSA:1.10.472.10		coord: 177..283 score: 2.9E-9coord: 84..176 score: 6.0
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 193..277 score: 2.1coord: 91..176 score: 4.
IPR013763	Cyclin-like	unknown	SSF47954	Cyclin-like	coord: 44..182 score: 2.55
None	No IPR available	PANTHER	PTHR10177	CYCLINE	coord: 10..333 score: 7.4
None	No IPR available	PANTHER	PTHR10177:SF255	CYCLIN-D5-1	coord: 10..333 score: 7.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G28850	Cla014023	Watermelon (97103) v1	cpiwmB519
CSPI06G28850	Csa6G495110	Cucumber (Chinese Long) v2	cpicuB313
CSPI06G28850	Csa4G642510	Cucumber (Chinese Long) v2	cpicuB300
CSPI06G28850	MELO3C007628	Melon (DHL92) v3.5.1	cpimeB508
CSPI06G28850	MELO3C016815	Melon (DHL92) v3.5.1	cpimeB507
CSPI06G28850	ClCG01G017510	Watermelon (Charleston Gray)	cpiwcgB453
CSPI06G28850	Lsi01G008990	Bottle gourd (USVL1VR-Ls)	cpilsiB439
CSPI06G28850	Lsi04G014890	Bottle gourd (USVL1VR-Ls)	cpilsiB463
CSPI06G28850	MELO3C007628.2	Melon (DHL92) v3.6.1	cpimedB493
CSPI06G28850	MELO3C016815.2	Melon (DHL92) v3.6.1	cpimedB492
CSPI06G28850	CsaV3_4G035020	Cucumber (Chinese Long) v3	cpicucB349
CSPI06G28850	CsaV3_6G044060	Cucumber (Chinese Long) v3	cpicucB363
CSPI06G28850	Cla97C01G016690	Watermelon (97103) v2	cpiwmbB433
CSPI06G28850	Bhi03G000786	Wax gourd	cpiwgoB626
CSPI06G28850	Cucsa.103130	Cucumber (Gy14) v1	cgycpiB122
CSPI06G28850	Cucsa.352800	Cucumber (Gy14) v1	cgycpiB523
CSPI06G28850	CmaCh09G002890	Cucurbita maxima (Rimu)	cmacpiB034
CSPI06G28850	CmaCh07G006530	Cucurbita maxima (Rimu)	cmacpiB893
CSPI06G28850	CmoCh01G018450	Cucurbita moschata (Rifu)	cmocpiB483
CSPI06G28850	CmoCh07G006630	Cucurbita moschata (Rifu)	cmocpiB873
CSPI06G28850	CmoCh09G002800	Cucurbita moschata (Rifu)	cmocpiB024
CSPI06G28850	Cp4.1LG19g10890	Cucurbita pepo (Zucchini)	cpecpiB503
CSPI06G28850	CsGy6G028320	Cucumber (Gy14) v2	cgybcpiB287
CSPI06G28850	CsGy4G023060	Cucumber (Gy14) v2	cgybcpiB189
CSPI06G28850	Carg10642	Silver-seed gourd	carcpiB0809
CSPI06G28850	Carg18554	Silver-seed gourd	carcpiB0003

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CSPI06G28850	CSPI04G24770	Wild cucumber (PI 183967)	cpicpiB161

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G28850	Watermelon (97103) v2	cpiwmbB520
CSPI06G28850	Wax gourd	cpiwgoB582
CSPI06G28850	Wild cucumber (PI 183967)	cpicpiB083
CSPI06G28850	Wild cucumber (PI 183967)	cpicpiB084
CSPI06G28850	Cucumber (Gy14) v1	cgycpiB581
CSPI06G28850	Cucurbita maxima (Rimu)	cmacpiB197
CSPI06G28850	Cucurbita maxima (Rimu)	cmacpiB631
CSPI06G28850	Cucurbita maxima (Rimu)	cmacpiB689
CSPI06G28850	Cucurbita moschata (Rifu)	cmocpiB179
CSPI06G28850	Cucurbita moschata (Rifu)	cmocpiB623
CSPI06G28850	Cucurbita moschata (Rifu)	cmocpiB681
CSPI06G28850	Cucumber (Chinese Long) v2	cpicuB277
CSPI06G28850	Melon (DHL92) v3.5.1	cpimeB470
CSPI06G28850	Watermelon (Charleston Gray)	cpiwcgB529
CSPI06G28850	Watermelon (97103) v1	cpiwmB476
CSPI06G28850	Cucurbita pepo (Zucchini)	cpecpiB080
CSPI06G28850	Cucurbita pepo (Zucchini)	cpecpiB764
CSPI06G28850	Cucurbita pepo (Zucchini)	cpecpiB843
CSPI06G28850	Bottle gourd (USVL1VR-Ls)	cpilsiB482
CSPI06G28850	Melon (DHL92) v3.6.1	cpimedB461
CSPI06G28850	Cucumber (Gy14) v2	cgybcpiB083
CSPI06G28850	Silver-seed gourd	carcpiB0446
CSPI06G28850	Silver-seed gourd	carcpiB0492
CSPI06G28850	Cucumber (Chinese Long) v3	cpicucB327