CSPI06G27920 (gene) Wild cucumber (PI 183967)

NameCSPI06G27920
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 24430300 .. 24430488 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAATAGAAGAGAAGATAACGGCTGGAGAAGAAGTAGAGCAAGTGATAAGCAGTGGTGGGTACTTGGGAAACCAAGTGCAGAGCGTTTTCAAGCAGGGGATAGCCAGAATTAGGGCAAAAAGAATAATTTTTACGGAAGCTTCCGTGGTTGAAGGAAAGTACCAGCCCCTTCGCTGCCGTCGTTAG

mRNA sequence

ATGATAATAGAAGAGAAGATAACGGCTGGAGAAGAAGTAGAGCAAGTGATAAGCAGTGGTGGGTACTTGGGAAACCAAGTGCAGAGCGTTTTCAAGCAGGGGATAGCCAGAATTAGGGCAAAAAGAATAATTTTTACGGAAGCTTCCGTGGTTGAAGGAAAGTACCAGCCCCTTCGCTGCCGTCGTTAG

Coding sequence (CDS)

ATGATAATAGAAGAGAAGATAACGGCTGGAGAAGAAGTAGAGCAAGTGATAAGCAGTGGTGGGTACTTGGGAAACCAAGTGCAGAGCGTTTTCAAGCAGGGGATAGCCAGAATTAGGGCAAAAAGAATAATTTTTACGGAAGCTTCCGTGGTTGAAGGAAAGTACCAGCCCCTTCGCTGCCGTCGTTAG
BLAST of CSPI06G27920 vs. TrEMBL
Match: A0A0A0KFQ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490210 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 5.4e-25
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 1

Query: 1  MIIEEKITAGEEVEQVISSGGYLGNQVQSVFKQGIARIRAKRIIFTEASVVEGKYQPLRC 60
          MIIEEK+TAGEEVEQVISSGGYLGNQVQSVFKQGIARIRAKRIIFTEASVVEGKYQPLRC
Sbjct: 1  MIIEEKMTAGEEVEQVISSGGYLGNQVQSVFKQGIARIRAKRIIFTEASVVEGKYQPLRC 60

Query: 61 RR 63
          RR
Sbjct: 61 RR 62

BLAST of CSPI06G27920 vs. NCBI nr
Match: gi|700193301|gb|KGN48505.1| (hypothetical protein Csa_6G490210 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 7.8e-25
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 1

Query: 1  MIIEEKITAGEEVEQVISSGGYLGNQVQSVFKQGIARIRAKRIIFTEASVVEGKYQPLRC 60
          MIIEEK+TAGEEVEQVISSGGYLGNQVQSVFKQGIARIRAKRIIFTEASVVEGKYQPLRC
Sbjct: 1  MIIEEKMTAGEEVEQVISSGGYLGNQVQSVFKQGIARIRAKRIIFTEASVVEGKYQPLRC 60

Query: 61 RR 63
          RR
Sbjct: 61 RR 62

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KFQ7_CUCSA5.4e-2598.39Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490210 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|700193301|gb|KGN48505.1|7.8e-2598.39hypothetical protein Csa_6G490210 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G27920.1CSPI06G27920.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G27920Csa6G490210Cucumber (Chinese Long) v2cpicuB313
CSPI06G27920CsaV3_6G043070Cucumber (Chinese Long) v3cpicucB363
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G27920Wax gourdcpiwgoB590
CSPI06G27920Wax gourdcpiwgoB609
CSPI06G27920Wax gourdcpiwgoB636
CSPI06G27920Wild cucumber (PI 183967)cpicpiB087
CSPI06G27920Wild cucumber (PI 183967)cpicpiB088
CSPI06G27920Wild cucumber (PI 183967)cpicpiB160
CSPI06G27920Watermelon (97103) v1cpiwmB519
CSPI06G27920Cucumber (Gy14) v1cgycpiB122
CSPI06G27920Cucumber (Gy14) v1cgycpiB344
CSPI06G27920Cucurbita maxima (Rimu)cmacpiB032
CSPI06G27920Cucurbita maxima (Rimu)cmacpiB141
CSPI06G27920Cucurbita maxima (Rimu)cmacpiB634
CSPI06G27920Cucurbita maxima (Rimu)cmacpiB689
CSPI06G27920Cucurbita maxima (Rimu)cmacpiB820
CSPI06G27920Cucurbita maxima (Rimu)cmacpiB893
CSPI06G27920Cucurbita moschata (Rifu)cmocpiB022
CSPI06G27920Cucurbita moschata (Rifu)cmocpiB182
CSPI06G27920Cucurbita moschata (Rifu)cmocpiB482
CSPI06G27920Cucurbita moschata (Rifu)cmocpiB626
CSPI06G27920Cucurbita moschata (Rifu)cmocpiB681
CSPI06G27920Cucurbita moschata (Rifu)cmocpiB807
CSPI06G27920Cucurbita moschata (Rifu)cmocpiB873
CSPI06G27920Cucumber (Chinese Long) v2cpicuB276
CSPI06G27920Cucumber (Chinese Long) v2cpicuB280
CSPI06G27920Cucumber (Chinese Long) v2cpicuB281
CSPI06G27920Melon (DHL92) v3.5.1cpimeB430
CSPI06G27920Melon (DHL92) v3.5.1cpimeB472
CSPI06G27920Melon (DHL92) v3.5.1cpimeB506
CSPI06G27920Melon (DHL92) v3.5.1cpimeB508
CSPI06G27920Watermelon (Charleston Gray)cpiwcgB442
CSPI06G27920Watermelon (Charleston Gray)cpiwcgB453
CSPI06G27920Watermelon (Charleston Gray)cpiwcgB471
CSPI06G27920Watermelon (Charleston Gray)cpiwcgB476
CSPI06G27920Watermelon (Charleston Gray)cpiwcgB531
CSPI06G27920Watermelon (97103) v1cpiwmB463
CSPI06G27920Watermelon (97103) v1cpiwmB477
CSPI06G27920Watermelon (97103) v1cpiwmB549
CSPI06G27920Cucurbita pepo (Zucchini)cpecpiB080
CSPI06G27920Cucurbita pepo (Zucchini)cpecpiB123
CSPI06G27920Cucurbita pepo (Zucchini)cpecpiB503
CSPI06G27920Cucurbita pepo (Zucchini)cpecpiB584
CSPI06G27920Cucurbita pepo (Zucchini)cpecpiB689
CSPI06G27920Cucurbita pepo (Zucchini)cpecpiB842
CSPI06G27920Bottle gourd (USVL1VR-Ls)cpilsiB435
CSPI06G27920Bottle gourd (USVL1VR-Ls)cpilsiB439
CSPI06G27920Bottle gourd (USVL1VR-Ls)cpilsiB461
CSPI06G27920Bottle gourd (USVL1VR-Ls)cpilsiB486
CSPI06G27920Melon (DHL92) v3.6.1cpimedB425
CSPI06G27920Melon (DHL92) v3.6.1cpimedB428
CSPI06G27920Melon (DHL92) v3.6.1cpimedB463
CSPI06G27920Melon (DHL92) v3.6.1cpimedB491
CSPI06G27920Melon (DHL92) v3.6.1cpimedB493
CSPI06G27920Cucumber (Gy14) v2cgybcpiB085
CSPI06G27920Cucumber (Gy14) v2cgybcpiB188
CSPI06G27920Cucumber (Gy14) v2cgybcpiB287
CSPI06G27920Silver-seed gourdcarcpiB0212
CSPI06G27920Silver-seed gourdcarcpiB0446
CSPI06G27920Silver-seed gourdcarcpiB0846
CSPI06G27920Silver-seed gourdcarcpiB0927
CSPI06G27920Cucumber (Chinese Long) v3cpicucB330
CSPI06G27920Cucumber (Chinese Long) v3cpicucB332
CSPI06G27920Cucumber (Chinese Long) v3cpicucB378
CSPI06G27920Watermelon (97103) v2cpiwmbB433
CSPI06G27920Watermelon (97103) v2cpiwmbB521
CSPI06G27920Watermelon (97103) v2cpiwmbB538