CSPI06G25860 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G25860
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionH+-transporting two-sector ATPase, alpha/beta subunit, central region
LocationChr6 : 22929239 .. 22929976 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAATGCAGAAAAAGCCGACTGGAACCTCTACCCTCGAAGACCGTTAAGAAGTGTCGAGGAAGTTCTTTGGGAAGATATGAAAGTCTCCCTCCCTCCCTTGCCTGATTCAGGATTTGACAATCCTCGTTGGACTTTAAACAACAATGGCAGCTTCACTGTGGCTTCCATCAAACTTGCAAGACCTCTAAACAACCAAGACGAGACCAACGAAGATGATGAGGAGATCTATAACAACTTATGGAAATCTACCATCCCCAAAAGATGCAAATTCTTCGTATGGACTCTCCTACATGAGTGTATCAATACAATGGATATGCTACAGAGAAGGCTCCCAACGTGGAATTTAAAGCCCTCTTGGTGCATCCTATGCAAAGCTGCTGAGGAAGACAGACAACATCTTTTCACCCACTGCCCCTTCTCAACAAATCTCTGGAAGAAAGTTGAAGTTATACTGGGCAAATCCCTGCTCTTTCCAAATTCCACTGCCTTATGCAAAGATCTCTTCAAAACAAAAGGTAAAACGAAAAAGCAAACTATCAAACAACACATGGTGGCTGCTACTCTTTGGAACATTTGGAATGAAAGAAATAGAAGGATTTTTAGGGGGGAAGAAAAAAAAGTTGATTCTGTATGGGAAGACATACAAGCCATAACGGGTTTTTGGACAAGCCGATCTTCTCTCTTCAAAAATTACTCGCCTAGCTCTATTGCATTAAACTTAGATGCTTTTTAG

mRNA sequence

ATGTGGAATGCAGAAAAAGCCGACTGGAACCTCTACCCTCGAAGACCGTTAAGAAGTGTCGAGGAAGTTCTTTGGGAAGATATGAAAGTCTCCCTCCCTCCCTTGCCTGATTCAGGATTTGACAATCCTCGTTGGACTTTAAACAACAATGGCAGCTTCACTGTGGCTTCCATCAAACTTGCAAGACCTCTAAACAACCAAGACGAGACCAACGAAGATGATGAGGAGATCTATAACAACTTATGGAAATCTACCATCCCCAAAAGATGCAAATTCTTCGTATGGACTCTCCTACATGAGTGTATCAATACAATGGATATGCTACAGAGAAGGCTCCCAACGTGGAATTTAAAGCCCTCTTGGTGCATCCTATGCAAAGCTGCTGAGGAAGACAGACAACATCTTTTCACCCACTGCCCCTTCTCAACAAATCTCTGGAAGAAAGTTGAAGTTATACTGGGCAAATCCCTGCTCTTTCCAAATTCCACTGCCTTATGCAAAGATCTCTTCAAAACAAAAGGTAAAACGAAAAAGCAAACTATCAAACAACACATGGTGGCTGCTACTCTTTGGAACATTTGGAATGAAAGAAATAGAAGGATTTTTAGGGGGGAAGAAAAAAAAGTTGATTCTGTATGGGAAGACATACAAGCCATAACGGGTTTTTGGACAAGCCGATCTTCTCTCTTCAAAAATTACTCGCCTAGCTCTATTGCATTAAACTTAGATGCTTTTTAG

Coding sequence (CDS)

ATGTGGAATGCAGAAAAAGCCGACTGGAACCTCTACCCTCGAAGACCGTTAAGAAGTGTCGAGGAAGTTCTTTGGGAAGATATGAAAGTCTCCCTCCCTCCCTTGCCTGATTCAGGATTTGACAATCCTCGTTGGACTTTAAACAACAATGGCAGCTTCACTGTGGCTTCCATCAAACTTGCAAGACCTCTAAACAACCAAGACGAGACCAACGAAGATGATGAGGAGATCTATAACAACTTATGGAAATCTACCATCCCCAAAAGATGCAAATTCTTCGTATGGACTCTCCTACATGAGTGTATCAATACAATGGATATGCTACAGAGAAGGCTCCCAACGTGGAATTTAAAGCCCTCTTGGTGCATCCTATGCAAAGCTGCTGAGGAAGACAGACAACATCTTTTCACCCACTGCCCCTTCTCAACAAATCTCTGGAAGAAAGTTGAAGTTATACTGGGCAAATCCCTGCTCTTTCCAAATTCCACTGCCTTATGCAAAGATCTCTTCAAAACAAAAGGTAAAACGAAAAAGCAAACTATCAAACAACACATGGTGGCTGCTACTCTTTGGAACATTTGGAATGAAAGAAATAGAAGGATTTTTAGGGGGGAAGAAAAAAAAGTTGATTCTGTATGGGAAGACATACAAGCCATAACGGGTTTTTGGACAAGCCGATCTTCTCTCTTCAAAAATTACTCGCCTAGCTCTATTGCATTAAACTTAGATGCTTTTTAG
Homology
[Close]
BLAST of CSPI06G25860 vs. TrEMBL
Match: M5XV38_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019854mg PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.0e-28
Identity = 74/207 (35.75%), Postives = 107/207 (51.69%), Query Frame = 1 

Query: 41  DNPRWTLNNNGSFTVASIKLARPLNNQDETNEDDEEIYNNLWKSTIPKRCKFFVWTLLHE 100
           D   W +   GSF+  S +     +    T  D    ++++WK+  P + +FFVW   + 
Sbjct: 265 DRRSWEVEEQGSFSCKSFR-----SFLLSTTRDVFPPFSSIWKAKTPPKIQFFVWLAANG 324

Query: 101 CINTMDMLQRRLPTWNLKPSWCILCKAAEEDRQHLFTHCPFSTNLWKKVEVILGKSLLFP 160
            INT D +QRR P   L PSWC+LCK   E+  HLF HC +S  LW K+   LG   + P
Sbjct: 325 RINTCDCIQRRQPKMCLSPSWCVLCKENAENIDHLFIHCSYSLRLWWKMLGALGVEWVIP 384

Query: 161 NST-ALCKDLFKTKGKTKKQTI-KQHMVAATLWNIWNERNRRIFRGE-EKKVDSVWEDIQ 220
                L     +  GK K+  I +  +V A  WNIW ERN+RIF+G    +V+ +W+ I+
Sbjct: 385 KGCFELLSINLRISGKGKRAGILRDCLVHAIFWNIWMERNQRIFQGHIGVRVEELWDRIK 444

Query: 221 AITGFWTSRSSLFKNYSPSSIALNLDA 245
                W S S  FK+Y  S+I  ++ A
Sbjct: 445 FWASLWASVSGQFKDYHYSTIMRDMMA 466

[Close]
BLAST of CSPI06G25860 vs. TrEMBL
Match: M5WJ76_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015871mg PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.0e-28
Identity = 74/207 (35.75%), Postives = 107/207 (51.69%), Query Frame = 1 

Query: 41   DNPRWTLNNNGSFTVASIKLARPLNNQDETNEDDEEIYNNLWKSTIPKRCKFFVWTLLHE 100
            D   W +   GSF+  S +     +    T  D    ++++WK+  P + +FFVW   + 
Sbjct: 1295 DRRSWEVEEQGSFSCKSFR-----SFLLSTTRDVFPPFSSIWKAKTPPKIQFFVWLAANG 1354

Query: 101  CINTMDMLQRRLPTWNLKPSWCILCKAAEEDRQHLFTHCPFSTNLWKKVEVILGKSLLFP 160
             INT D +QRR P   L PSWC+LCK   E+  HLF HC +S  LW K+   LG   + P
Sbjct: 1355 RINTCDCIQRRQPKMCLSPSWCVLCKENAENIDHLFIHCSYSLRLWWKMLGALGVEWVIP 1414

Query: 161  NST-ALCKDLFKTKGKTKKQTI-KQHMVAATLWNIWNERNRRIFRGE-EKKVDSVWEDIQ 220
                 L     +  GK K+  I +  +V A  WNIW ERN+RIF+G    +V+ +W+ I+
Sbjct: 1415 KGCFELLSINLRISGKGKRAGILRDCLVHAIFWNIWMERNQRIFQGHIGVRVEELWDRIK 1474

Query: 221  AITGFWTSRSSLFKNYSPSSIALNLDA 245
                 W S S  FK+Y  S+I  ++ A
Sbjct: 1475 FWASLWASVSGQFKDYHYSTIMRDMMA 1496

[Close]
BLAST of CSPI06G25860 vs. TrEMBL
Match: M5XJT6_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa027084mg PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-27
Identity = 73/207 (35.27%), Postives = 106/207 (51.21%), Query Frame = 1 

Query: 41  DNPRWTLNNNGSFTVASIKLARPLNNQDETNEDDEEIYNNLWKSTIPKRCKFFVWTLLHE 100
           D  RW L ++GSFT  S +       + ET       ++ +WK+  P + K FVW +   
Sbjct: 90  DRRRWDLEDSGSFTCKSFQSFLRNKGRAETFPP----FSLVWKAKSPPKVKVFVWLVALG 149

Query: 101 CINTMDMLQRRLPTWNLKPSWCILCKAAEEDRQHLFTHCPFSTNLWKKVEVILGKSLLFP 160
            +NT D++QR+ P   L P WC+LCK  EE   HLF HCPFS +LW  +   +G   + P
Sbjct: 150 KVNTSDLVQRKRPFMYLSPQWCVLCKLCEESVDHLFLHCPFSLSLWWLLWREVGTVWVIP 209

Query: 161 N--STALCKDLFKTKGKTKKQTIKQHMVAATLWNIWNERNRRIFRG-EEKKVDSVWEDIQ 220
              S  LC D           T+   +V +  W IW ERNRRIF   +  +V  +W+ ++
Sbjct: 210 KGCSDFLCSDFVVWGLGKLTSTLWGCLVHSVFWIIWMERNRRIFEDYKGVRVSDLWDRVK 269

Query: 221 AITGFWTSRSSLFKNYSPSSIALNLDA 245
               FW S +  FK+YS S+I  ++ A
Sbjct: 270 YWAAFWASVTKDFKDYSYSTIMRDMAA 292

[Close]
BLAST of CSPI06G25860 vs. TrEMBL
Match: M5VH03_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019714mg PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-27
Identity = 73/207 (35.27%), Postives = 107/207 (51.69%), Query Frame = 1 

Query: 41  DNPRWTLNNNGSFTVASIKLARPLNNQDETNEDDEEIYNNLWKSTIPKRCKFFVWTLLHE 100
           D   W +   GSF+  S +     +    T  D    ++++WK+  P + +FFVW   + 
Sbjct: 225 DQRSWEVEEQGSFSCKSFR-----SFLLSTTRDVFPPFSSIWKAKTPPKIQFFVWLAANG 284

Query: 101 CINTMDMLQRRLPTWNLKPSWCILCKAAEEDRQHLFTHCPFSTNLWKKVEVILGKSLLFP 160
            INT D +QRR P   L PSWC+LCK   E+  HLF HC +S  LW ++   LG   + P
Sbjct: 285 RINTCDCIQRRQPKMCLSPSWCVLCKENAENIDHLFIHCSYSLKLWWRMLGALGVEWVIP 344

Query: 161 NST-ALCKDLFKTKGKTKKQTI-KQHMVAATLWNIWNERNRRIFRGE-EKKVDSVWEDIQ 220
                L     +  GK K+  I +  +V A  WNIW ERNR+ F+G  E +V+ +W+ I+
Sbjct: 345 KGCFELLSINLRISGKGKRAGILRDCLVHAIFWNIWMERNRKKFQGHIEVRVEELWDRIK 404

Query: 221 AITGFWTSRSSLFKNYSPSSIALNLDA 245
                W S S  FK+Y  S+I  ++ A
Sbjct: 405 FWASLWASVSGQFKDYHYSTIMRDMMA 426

[Close]
BLAST of CSPI06G25860 vs. TrEMBL
Match: M5X8A1_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017388mg PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.0e-27
Identity = 74/210 (35.24%), Postives = 107/210 (50.95%), Query Frame = 1 

Query: 38  SGFDNPRWTLNNNGSFTVASIKLARPLNNQDETNEDDEEIYNNLWKSTIPKRCKFFVWTL 97
           S  D   W +   GSF+  S +     +    T  D    ++++WK+  P + +FFVW  
Sbjct: 84  SRLDRRSWEIEEQGSFSCKSFR-----SFLLSTTRDVFPPFSSIWKAKTPPKIQFFVWLA 143

Query: 98  LHECINTMDMLQRRLPTWNLKPSWCILCKAAEEDRQHLFTHCPFSTNLWKKVEVILGKSL 157
            +  INT D +QRR P   L PSWC+LCK   E+  HLF HC +S  LW ++   LG   
Sbjct: 144 ANGRINTCDCIQRRQPKICLSPSWCVLCKENAENIDHLFIHCSYSLKLWWRMLGALGAEW 203

Query: 158 LFPNST-ALCKDLFKTKGKTKKQTI-KQHMVAATLWNIWNERNRRIFRGE-EKKVDSVWE 217
           + P     L     +  GK K+  I +  +V A  WNIW ER RRIF+G    +V+ +W+
Sbjct: 204 VIPKGCFELLSINLRISGKGKRAGILRDCLVHAIFWNIWMERYRRIFQGHIGVRVEELWD 263

Query: 218 DIQAITGFWTSRSSLFKNYSPSSIALNLDA 245
            I+     W S S  FK+Y  S+I  ++ A
Sbjct: 264 RIKFWASLWASVSGQFKDYHYSTIMRDMMA 288

[Close]
BLAST of CSPI06G25860 vs. TAIR10
Match: AT1G43730.1 (AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein)

HSP 1 Score: 71.2 bits (173), Expect = 9.7e-13
Identity = 46/144 (31.94%), Postives = 71/144 (49.31%), Query Frame = 1 

Query: 78  YNNLW-KSTIPKRCKFFVWTLLHECINTMDMLQRRLPTWNLK-PSWCILCKAAEEDRQHL 137
           Y  +W K+ +PK   F  W +    ++T D    RL +W L  P+ C+LC + +E R HL
Sbjct: 152 YKAVWFKNHVPKHA-FICWVVAWNRLHTRD----RLRSWGLSIPAVCLLCNSHDESRAHL 211

Query: 138 FTHCPFSTNLWKKVEVILGKSLLFPNSTAL-CKDLFKTKGKTKKQTIKQHMV-AATLWNI 197
           F  CPF   +W+      G++ LFP +  + C        + K  T+   +   A ++ I
Sbjct: 212 FFECPFCGAVWR---FFTGRANLFPPAQLMYCLIWLLNPSRDKNTTLIIRLAFQAYVYAI 271

Query: 198 WNERNRRIFRGEEKKVDSVWEDIQ 218
           W ERN  +  G  +  DSV +DIQ
Sbjct: 272 WRERNLCLHTGVARVFDSVLKDIQ 287

[Close]
BLAST of CSPI06G25860 vs. TAIR10
Match: AT4G04650.1 (AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein)

HSP 1 Score: 66.6 bits (161), Expect = 2.4e-11
Identity = 43/161 (26.71%), Postives = 75/161 (46.58%), Query Frame = 1 

Query: 82  WKSTIPKRCKFFVWTLLHECINTMDMLQRRLPTWNLK-PSWCILCKAAEEDRQHLFTHCP 141
           +K+ +PK   F  W +    ++T D LQ     W L  P+ C+LC A ++ R HLF  C 
Sbjct: 135 FKNHVPKHA-FICWVVAWNRLHTRDRLQN----WGLSIPAECLLCNAHDDSRAHLFFECQ 194

Query: 142 FSTNLWKKVEVILGKSLLFPNSTALCKDLFKTKGKTKKQTIKQHMV-AATLWNIWNERNR 201
           FS  +W+        +L  P     C +   +  + K   +   +   + ++ IW ERN+
Sbjct: 195 FSGVVWRFFTA--STNLNPPAQLMDCLNWLLSPSREKNICLIIRLAFHSCVYAIWRERNQ 254

Query: 202 RIFRGEEKKVDSVWEDIQAITGFWTSRSSLFKNYSPSSIAL 241
           R+  G  +  +S+ +DIQ I        S    + P++++L
Sbjct: 255 RLHSGVSRSTESILKDIQLIIRARLDPLSRSTAHQPNALSL 288

[Close]
BLAST of CSPI06G25860 vs. TAIR10
Match: AT4G29090.1 (AT4G29090.1 Ribonuclease H-like superfamily protein)

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-09
Identity = 46/179 (25.70%), Postives = 70/179 (39.11%), Query Frame = 1 

Query: 41  DNPRWTLNNNGSFTVAS--IKLARPLNNQDETNEDDEE----IYNNLWKSTIPKRCKFFV 100
           D+  W   ++G +TV S    L + +N +    E  E     IY  +WKS    + + F+
Sbjct: 211 DSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFL 270

Query: 101 WTLLHECINTMDMLQRRLPTWNLKPSWCILCKAAEEDRQHLFTHCPFSTNLWKKVEVILG 160
           W  L   +     L  R  +   K S CI C + +E   HL   C F+   W    + + 
Sbjct: 271 WKCLSNSLPVAGALAYRHLS---KESACIRCPSCKETVNHLLFKCTFARLTWAISSIPIP 330

Query: 161 KSLLFPNSTALCKDLFKTKGKTKKQTIK-QHMVAATLWNIWNERNRRIFRGEEKKVDSV 213
               + +S  +        G    Q  K   +V   LW +W  RN  +FRG E     V
Sbjct: 331 LGGEWADSIYVNLYWVFNLGNGNPQWEKASQLVPWLLWRLWKNRNELVFRGREFNAQEV 386

[Close]
BLAST of CSPI06G25860 vs. TAIR10
Match: AT1G45063.1 (AT1G45063.1 copper ion binding;electron carriers)

HSP 1 Score: 55.5 bits (132), Expect = 5.5e-08
Identity = 31/100 (31.00%), Postives = 48/100 (48.00%), Query Frame = 1 

Query: 111 RLPTWNLK-PSWCILCKAAEEDRQHLFTHCPFSTNLWKKVEVILGKSLLFPNSTALCKDL 170
           R  +W ++ PS C+LC A +E RQH+F  CPFS  +W         S    N+      +
Sbjct: 272 RFISWGIQVPSLCLLCNALDETRQHVFFDCPFSHEVW---------SFFCSNARVTPPRM 331

Query: 171 FKTKGKTKKQTIKQHMVA--------ATLWNIWNERNRRI 202
           FK   +  +   +   VA        A++++IW ERN R+
Sbjct: 332 FKDSARWLRHPCRDKKVAFILKLAYQASVYHIWRERNIRL 362

[Close]
BLAST of CSPI06G25860 vs. NCBI nr
Match: gi|659122972|ref|XP_008461420.1| (PREDICTED: putative ribonuclease H protein At1g65750 [Cucumis melo])

HSP 1 Score: 235.0 bits (598), Expect = 1.4e-58
Identity = 109/245 (44.49%), Postives = 143/245 (58.37%), Query Frame = 1 

Query: 2   WNAEKADWNLYPRRPLRSVEEVLWEDMKVSLP-PLPDSGFDNPRWTLNNNGSFTVASIKL 61
           WN    DW+L+  RPLR  EE LW ++K SLP PLP+ G   P W LN+N  F  AS+K 
Sbjct: 165 WNPSSNDWHLHINRPLRDHEENLWHNIKASLPTPLPNRGHPKPLWKLNSNNIFDTASVKR 224

Query: 62  ARPLNNQDETNEDDEEIYNNLWKSTIPKRCKFFVWTLLHECINTMDMLQRRLPTWNLKPS 121
           A         N     +Y  LWK   PK+CKFF+WTL+H CINT D LQ+RLP W L P+
Sbjct: 225 ALAEAPISPANFHPN-LYKTLWKVEFPKKCKFFIWTLIHGCINTADRLQKRLPNWTLSPN 284

Query: 122 WCILCKAAEEDRQHLFTHCPFSTNLWKKVEVILGKSLLFPNSTALCKDLFKTKGKTKKQT 181
           WC +C  ++ED  HLF HCP+S  LW K + +L  +    +  +L +++     + +K  
Sbjct: 285 WCYMCNKSQEDINHLFIHCPYSQQLWSKAKALLNWNSTPTDVQSLVQNICSLNTRNQKGL 344

Query: 182 IKQHMVAATLWNIWNERNRRIFRGEEKKVDSVWEDIQAITGFWTSRSSLFKNYSPSSIAL 241
           I  +  A  LW IW ERN RIF+ +EK    +WED  A  G W+ +S LF NY   SIAL
Sbjct: 345 ITFNTNATILWKIWLERNNRIFKQQEKAPQDLWEDTLAQIGLWSCKSKLFSNYDCCSIAL 404

Query: 242 NLDAF 246
           N+ AF
Sbjct: 405 NISAF 408

[Close]
BLAST of CSPI06G25860 vs. NCBI nr
Match: gi|659071582|ref|XP_008460744.1| (PREDICTED: putative ribonuclease H protein At1g65750 [Cucumis melo])

HSP 1 Score: 180.3 bits (456), Expect = 4.2e-42
Identity = 83/193 (43.01%), Postives = 114/193 (59.07%), Query Frame = 1 

Query: 2   WNAEKADWNLYPRRPLRSVEEVLWEDMKVSLP-PLPDSGFDNPRWTLNNNGSFTVASIKL 61
           WN    DW+++  RPLR  E   W D+K  L  P P+ G     W LN+NG F++AS+K 
Sbjct: 77  WNVNN-DWDIHIHRPLRDYELQTWNDIKAPLAVPHPNKGAPKSFWKLNSNGGFSIASVKK 136

Query: 62  ARPLNNQDETNEDDEEIYNNLWKSTIPKRCKFFVWTLLHECINTMDMLQRRLPTWNLKPS 121
           A      D+        +N+LWKS IPKRCKFF+WTL+HECINT + LQ+RLP +NL P 
Sbjct: 137 ALNSIEIDDNIAIQASTFNSLWKSEIPKRCKFFIWTLIHECINTAEKLQKRLPNYNLCPQ 196

Query: 122 WCILCKAAEEDRQHLFTHCPFSTNLWKKVEVILGKSLLFPNSTALCKDLFKTKGKTKKQT 181
           WC +CK+  ED  HLF  CP++  +W K   IL  +    +  +LCKD        +K++
Sbjct: 197 WCSMCKSNAEDINHLFIQCPYAQTIWNKARHILNWNQQPTSVRSLCKDFCGFNTANRKRS 256

Query: 182 IKQHMVAATLWNI 194
           I  +++A TLW I
Sbjct: 257 ITFNLIAVTLWKI 268

[Close]
BLAST of CSPI06G25860 vs. NCBI nr
Match: gi|659086627|ref|XP_008444035.1| (PREDICTED: putative ribonuclease H protein At1g65750 [Cucumis melo])

HSP 1 Score: 168.3 bits (425), Expect = 1.7e-38
Identity = 93/251 (37.05%), Postives = 125/251 (49.80%), Query Frame = 1 

Query: 2   WNAEKADWNLYPRRPLRSVEEVLWEDMKVSLP-PLPDSGFDNPRWTLNNNGSFTVASIKL 61
           WN     WN+  RR L   E   W  +   LP P  + G   P WT ++N SF+ AS K+
Sbjct: 232 WNTFDNKWNIIFRRELNDRERSKWAKILEILPSPRSNRGSSKPTWTPDSNNSFSTASAKV 291

Query: 62  ARPLNNQDETNEDDEEIYNNLWKSTIPKRCKFFVWTLLHECINTMDMLQRRLPTWNLKPS 121
                      +   ++   +WKSTIP + KFF+W L+   INTM+++Q+R+P   L+P+
Sbjct: 292 LISRQLDQSPGDPRAKLLEIIWKSTIPMKIKFFMWCLIQRRINTMEVIQQRMPNIPLQPN 351

Query: 122 WCILCKAAEEDRQHLFTHCPFSTNLWKKVEVILGKSLLFPNSTALCKDLFKTKGKTKKQT 181
           WC+LCK   E   HL   C     LW      L  SL F  +T   +D+F      K   
Sbjct: 352 WCVLCKKDNESGTHLLLRCEAVKPLWS----FLQHSLNFALNTDELEDVFSFFSSLKCSI 411

Query: 182 IKQHMV----AATLWNIWNERNRRIF--RGEEKKVDSVWEDIQAITGFWTSRSSLFKNYS 241
            K  +V     A  W IW ERN RIF      K   ++WED + + G W SR S FKNYS
Sbjct: 412 PKHKVVFCGIIALFWEIWCERNLRIFGTSSSHKTTANMWEDCKILIGNWCSRDSYFKNYS 471

Query: 242 PSSIALNLDAF 246
            ++IALNL  F
Sbjct: 472 AATIALNLSNF 478

[Close]
BLAST of CSPI06G25860 vs. NCBI nr
Match: gi|658031110|ref|XP_008351012.1| (PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica])

HSP 1 Score: 139.8 bits (351), Expect = 6.3e-30
Identity = 83/248 (33.47%), Postives = 124/248 (50.00%), Query Frame = 1 

Query: 5   EKADWNLYPRRPLR--SVEEVLWEDMKVSLPPLPDSGFDNPRWTLNNNGSFTVASIKLAR 64
           +   WN   RR LR   +EEV     KV    L  S  D  RW L  +G FT  S     
Sbjct: 442 QSVXWNFDXRRNLRXSEIEEVAGLLQKVXAVRLCLSRADRRRWILEGSGQFTCKSYFSF- 501

Query: 65  PLNNQDETNEDDEEIYNNLWKSTIPKRCKFFVWTLLHECINTMDMLQRRLPTWNLKPSWC 124
            L N D   +        +WK+ +P + K  VW +    +NT D +QRR+P     P WC
Sbjct: 502 -LRNNDSVXQFLPS--PQIWKAKVPPKVKVLVWLVALRKVNTCDQIQRRMPYTCFSPHWC 561

Query: 125 ILCKAAEEDRQHLFTHCPFSTNLWKKVEVILGKSLLFPNSTALCKDLFKTK----GKTKK 184
           +LCK+ EE   H+F HCP+S  LW  +   +G   + P     C +L  T+    GK +K
Sbjct: 562 VLCKSGEESVNHVFLHCPYSIQLWWNLLKEVGAVWVIPKG---CFELLSTEFDALGKGRK 621

Query: 185 -QTIKQHMVAATLWNIWNERNRRIFRG-EEKKVDSVWEDIQAITGFWTSRSSLFKNYSPS 244
            +++   ++ A  WNIW ERN+R+F      +V+ +W+  +     W+S ++ F++Y+P 
Sbjct: 622 AKSLWGSLLMALXWNIWRERNKRVFEDYMGVEVEELWDKTKHWAALWSSVAAEFRDYNPL 681

[Close]
BLAST of CSPI06G25860 vs. NCBI nr
Match: gi|658027317|ref|XP_008349094.1| (PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica])

HSP 1 Score: 137.9 bits (346), Expect = 2.4e-29
Identity = 87/250 (34.80%), Postives = 127/250 (50.80%), Query Frame = 1 

Query: 5   EKADWNLYPRRPLRS--VEEVLWEDMKVSLPPLPDSGFDNPRWTLNNNGSFTVASIKLAR 64
           +   WNL  RR LR   +EEV     KV    L  S  D  R  L  +G FT  S     
Sbjct: 251 QPVSWNLEFRRNLRKSEIEEVAGLLQKVESVRLCHSREDRRRRNLEGSGQFTCKSY---- 310

Query: 65  PLNNQDETNEDDEEI--YNNLWKSTIPKRCKFFVWTLLHECINTMDMLQRRLPTWNLKPS 124
             N+    NED ++   ++ +WK+ +P + K  VW +    +NT D +QRR+P     P 
Sbjct: 311 --NSFLCNNEDVQQFPPFSQIWKAKVPPKVKILVWLVALGKVNTCDQVQRRMPFACFSPH 370

Query: 125 WCILCKAAEEDRQHLFTHCPFSTNLWKKVEVILGKSLLFPNSTALCKDLFKTK----GK- 184
           WC LCK+ EE   H+F HCP+S  LW K+   +G   + P     C +L  TK    GK 
Sbjct: 371 WCALCKSGEESANHVFLHCPYSIQLWWKLLKEVGARWVTPKG---CFELLSTKFEGLGKG 430

Query: 185 TKKQTIKQHMVAATLWNIWNERNRRIFRGEEKK---VDSVWEDIQAITGFWTSRSSLFKN 243
           +K +T+   ++    WNIW ERN+R+F  E+ K   V+ +W+ ++     W S S  F++
Sbjct: 431 SKAKTLWGSLLMTLFWNIWLERNKRVF--EDYKGVGVEELWDRVKHWAALWASVSVEFRD 489

The following BLAST results are available for this feature:
BLAST of CSPI06G25860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI06G25860 vs. TrEMBL
Match NameE-valueIdentityDescription
M5XV38_PRUPE7.0e-2835.75Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019854mg PE=4 SV=1[more]
M5WJ76_PRUPE7.0e-2835.75Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015871mg PE=4 S... [more]
M5XJT6_PRUPE1.2e-2735.27Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa027084mg PE=4 S... [more]
M5VH03_PRUPE1.2e-2735.27Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019714mg PE=4 S... [more]
M5X8A1_PRUPE2.0e-2735.24Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017388mg PE=4 S... [more]
BLAST of CSPI06G25860 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G43730.19.7e-1331.94 RNA-directed DNA polymerase (reverse transcriptase)-related family p... [more]
AT4G04650.12.4e-1126.71 RNA-directed DNA polymerase (reverse transcriptase)-related family p... [more]
AT4G29090.11.0e-0925.70 Ribonuclease H-like superfamily protein[more]
AT1G45063.15.5e-0831.00 copper ion binding;electron carriers[more]
BLAST of CSPI06G25860 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659122972|ref|XP_008461420.1|1.4e-5844.49PREDICTED: putative ribonuclease H protein At1g65750 [Cucumis melo][more]
gi|659071582|ref|XP_008460744.1|4.2e-4243.01PREDICTED: putative ribonuclease H protein At1g65750 [Cucumis melo][more]
gi|659086627|ref|XP_008444035.1|1.7e-3837.05PREDICTED: putative ribonuclease H protein At1g65750 [Cucumis melo][more]
gi|658031110|ref|XP_008351012.1|6.3e-3033.47PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica][more]
gi|658027317|ref|XP_008349094.1|2.4e-2934.80PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR026960RVT-Znf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G25860.1CSPI06G25860.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 73..146
score: 1.0
NoneNo IPR availablePANTHERPTHR25952FAMILY NOT NAMEDcoord: 20..215
score: 3.2
NoneNo IPR availablePANTHERPTHR25952:SF208SUBFAMILY NOT NAMEDcoord: 20..215
score: 3.2