CSPI06G25520 (gene) Wild cucumber (PI 183967)

NameCSPI06G25520
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 22688970 .. 22690353 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGATTATTAAAAAGCGTCACATCATGATCATGAACAAATATACAAATGCAAAATGCAACTACTCATTCCCAAGAGAAAACTTCTATCTACAACAAATCTTCATCCTCTAATTCAAACAAAAAATATTTCAAAGTAATACCAAAAGGATTAAAAAAAAAGGACTATGAAATCGATGTTTTACCTTTCAGATCAGAATGGAGTAGAAATTTTCTTAGTTCAAACCGCTGTTCATCCAAAGACAAATTGGATGGGAATCGGTCCTACCGAGCAAACATCCAAATCAAAGGCTGCCATTCGAAAATCTTCGGGCGGGTCCCGCCGAAGTGCACGATGATCCCTCGCATGGCGGAAGAGTCAATGCTACGCCTATGCTACCTCTATACCGGCCTCGCTTACGCTCCATGAACTGGACCTTCTTCCCGATGCAAATCGATGCATACCGCCCAAGGCAGGTGGTTCTGTTTCGTCGATCTTGCTTGGCGGCTGCGGCTGCGGCGGCGCTCTGATCTTCTGTTCCGGAGGAGAGTTTGTGAGTGAAGACGAGGCAGTTGGTTCGACGACCGGTTGCCTTCTTCCACCGCTCCGGAAAATTCTAGCGCGAAAACTCGCGAAGAATCCTTTCTTCTGTTTTTCGACTGATTTCTCCTTTGCGGTTGCTGTTAGTTCTGTTTCTGATGAGTGATGGTGATTATTGTTATTCTTCTGACGATTTCGGTCCTTCTTCGATCTTACTTTCCCCATACACGATACCTTGGGGGAAGAAGGCTCGATCATAGACGAAACCGATTTTCCAACGGATCCTGACCGTTTCGGAAACAACCGAATGTTTCCAGACTTACAATTACGCCGATTCTTCGCTTCCACATAAGCAGTGTTCTGAGACTTGGGCAATCCGATAATCGACGCCTTGGACTTCAAATTCAACGAAAATCTCTGCGAATTCGAATTAGGTTGCGGATGCAAATTAGGATTCAAATTCGTGGAATTAGAACTAGCCTTAGTAGATTCTTTCCTCTCGAGGAAGGCATTCCGATCGAACCAGTCGAACTCTGCATCCTTAGAGAGCCAGAAAGATTCCGGCGGAAAGTCAGGAGGAACTTCCCCCCGATCTAGGTCCTGTTTGTCGTCCTTTAATGGCAGCCGCTCTCCGTCGTCGTGGCCGGCAACAGCAGCACCAGTGAAGAAGGCCTGTAAATCTCCCTGCGGCATCATACAAAAGAAATGGAAAGGGAAAGGGAAAGAGGGAAACAAAATTGAAAGATAGAAAAAGGAAGAATTCTTGAATTTGAATGAAGAATGAGTAATGGAGATTTCTTTTCTTTCTTCTCTGTCGTCTTGGGTGTGTGCTTCGTGCGCAAATTAGGTGAAGAAAAAGGCTCTTCA

mRNA sequence

ATGCAAAATGCAACTACTCATTCCCAAGAGAAAACTTCTATCTACAACAAATCTTCATCCTCTAATTCAAACAAAAAATATTTCAAAGTAATACCAAAAGGATTAAAAAAAAAGGACTATGAAATCGATGTTTTACCTTTCAGATCAGAATGGAGTAGAAATTTTCTTAGTTCAAACCGCTGTTCATCCAAAGACAAATTGGATGGGAATCGGTCCTACCGAGCAAACATCCAAATCAAAGGCTGCCATTCGAAAATCTTCGGGCGGGTCCCGCCGAAGTGCACGATGATCCCTCGCATGGCGGAAGAGTCAATGCTACGCCTATGCTACCTCTATACCGGCCTCGCTTACGCTCCATGA

Coding sequence (CDS)

ATGCAAAATGCAACTACTCATTCCCAAGAGAAAACTTCTATCTACAACAAATCTTCATCCTCTAATTCAAACAAAAAATATTTCAAAGTAATACCAAAAGGATTAAAAAAAAAGGACTATGAAATCGATGTTTTACCTTTCAGATCAGAATGGAGTAGAAATTTTCTTAGTTCAAACCGCTGTTCATCCAAAGACAAATTGGATGGGAATCGGTCCTACCGAGCAAACATCCAAATCAAAGGCTGCCATTCGAAAATCTTCGGGCGGGTCCCGCCGAAGTGCACGATGATCCCTCGCATGGCGGAAGAGTCAATGCTACGCCTATGCTACCTCTATACCGGCCTCGCTTACGCTCCATGA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G25520.1CSPI06G25520.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G25520Cucumber (Chinese Long) v3cpicucB334
CSPI06G25520Cucumber (Chinese Long) v3cpicucB363
CSPI06G25520Cucumber (Chinese Long) v3cpicucB367
CSPI06G25520Watermelon (97103) v2cpiwmbB438
CSPI06G25520Watermelon (97103) v2cpiwmbB442
CSPI06G25520Watermelon (97103) v2cpiwmbB458
CSPI06G25520Watermelon (97103) v2cpiwmbB479
CSPI06G25520Wax gourdcpiwgoB530
CSPI06G25520Wax gourdcpiwgoB619
CSPI06G25520Wax gourdcpiwgoB637
CSPI06G25520Wild cucumber (PI 183967)cpicpiB125
CSPI06G25520Wild cucumber (PI 183967)cpicpiB186
CSPI06G25520Cucumber (Gy14) v1cgycpiB085
CSPI06G25520Cucumber (Gy14) v1cgycpiB362
CSPI06G25520Cucumber (Gy14) v1cgycpiB571
CSPI06G25520Cucurbita maxima (Rimu)cmacpiB271
CSPI06G25520Cucurbita maxima (Rimu)cmacpiB648
CSPI06G25520Cucurbita maxima (Rimu)cmacpiB689
CSPI06G25520Cucurbita maxima (Rimu)cmacpiB855
CSPI06G25520Cucurbita maxima (Rimu)cmacpiB894
CSPI06G25520Cucurbita moschata (Rifu)cmocpiB639
CSPI06G25520Cucurbita moschata (Rifu)cmocpiB681
CSPI06G25520Cucurbita moschata (Rifu)cmocpiB838
CSPI06G25520Cucurbita moschata (Rifu)cmocpiB874
CSPI06G25520Cucumber (Chinese Long) v2cpicuB284
CSPI06G25520Cucumber (Chinese Long) v2cpicuB313
CSPI06G25520Cucumber (Chinese Long) v2cpicuB315
CSPI06G25520Melon (DHL92) v3.5.1cpimeB426
CSPI06G25520Melon (DHL92) v3.5.1cpimeB485
CSPI06G25520Melon (DHL92) v3.5.1cpimeB513
CSPI06G25520Watermelon (Charleston Gray)cpiwcgB444
CSPI06G25520Watermelon (Charleston Gray)cpiwcgB463
CSPI06G25520Watermelon (Charleston Gray)cpiwcgB488
CSPI06G25520Watermelon (97103) v1cpiwmB467
CSPI06G25520Watermelon (97103) v1cpiwmB524
CSPI06G25520Watermelon (97103) v1cpiwmB534
CSPI06G25520Cucurbita pepo (Zucchini)cpecpiB081
CSPI06G25520Cucurbita pepo (Zucchini)cpecpiB503
CSPI06G25520Cucurbita pepo (Zucchini)cpecpiB627
CSPI06G25520Cucurbita pepo (Zucchini)cpecpiB762
CSPI06G25520Cucurbita pepo (Zucchini)cpecpiB878
CSPI06G25520Bottle gourd (USVL1VR-Ls)cpilsiB423
CSPI06G25520Bottle gourd (USVL1VR-Ls)cpilsiB440
CSPI06G25520Bottle gourd (USVL1VR-Ls)cpilsiB452
CSPI06G25520Melon (DHL92) v3.6.1cpimedB420
CSPI06G25520Melon (DHL92) v3.6.1cpimedB473
CSPI06G25520Melon (DHL92) v3.6.1cpimedB497
CSPI06G25520Cucumber (Gy14) v2cgybcpiB140
CSPI06G25520Cucumber (Gy14) v2cgybcpiB287
CSPI06G25520Cucumber (Gy14) v2cgybcpiB290
CSPI06G25520Silver-seed gourdcarcpiB0271
CSPI06G25520Silver-seed gourdcarcpiB0282
CSPI06G25520Silver-seed gourdcarcpiB0847
CSPI06G25520Silver-seed gourdcarcpiB0965