CSPI06G22140 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCTTATTTTGTTTTGACCCTTTCTTTCTTCAATAAGAAAAGAAAGCCTACTTGTTGTTTGGTTTCTACTTTCGACTCTCACTCTCTCTCTCTCACACTTCACTCCACTTCACATCCACAATTTCTTCTTCATCTCTCTAATCTCTCTCTCTCTCCTCCATGGCTTCTGTGAAGATGCCTTCGCCCTTCTTCTGGATCTCCACAATGGCGCTTTTTACACTCTCGGCTGCTGCCACCGTCCACCAAGTAGGCGACTCTCCCGGTTGGACCACTCTCATTCCCGTCGATTATGCCAAATGGGCTTCTTCCCAGAAATTCCATGTCGGCGACACTCTTCGTAAGTACCCACTTCCCCCCTTTTTTTTCCTTCTCCTAATTTTCTTTTCATTTTACTTTACCCTTACCAAATTTGAGAAACTACGTTACAGTGTTTAAATACAACAGCACGTTCCACAATGCACTGCAAGTGACTCAAGAACAATACAAAGCTTGCAACTCATCTTCTCCGGTGGCGTCGTACAGCTCCGGCGCAGATTCCATCGTTTTGAAAAGACCTGGAACCTTCTACTTCCTCTGTGGCTTTCCCGGGCACTGTCAACTGGGGCAGAAAGTGGAAGTCAAAGTTACCTCAGGTTCATCCTCTCATTTACCTGCTCCCTCCCCAAGCCCAGGCCCAAGCCCAAGCCCAATGGGCGGCCCATCTGCTTCTGCTCCCACCCCAAGTGCCGCTTCTTCTCTGTCCCACTTCTTCTCTATGCTAATTTGCCTCTCCTTGGAGTTTGCTTTGTTGTACTCTGTGTTTGTTTGAATTTCAATGCTGCTTCTTCCACTTGTGTTGTTGTGTGTTCTACCTTATATGATTGTACTTTGAATGTTGGAGCTAGTTCTAAGTGTTGTTGTTTCTTGTTTGTATCATCATATACTATGTATTTCTCACCTAATTTGCTTGTTTGGTGTTGCTTGTTACCCATTTGCTTTTTAGACTGATTCAACTGTTTGTTCATTGTTGTATAATAAGCACTTCAAAGAGTGTGTAGCTCAAATCTCATCTAAAGGCAGATTACTGTAATGTAATAAGGATTACTAACAATAGGAATACTATGTTTGAAGTGCAC ATGGCTTCTGTGAAGATGCCTTCGCCCTTCTTCTGGATCTCCACAATGGCGCTTTTTACACTCTCGGCTGCTGCCACCGTCCACCAAGTAGGCGACTCTCCCGGTTGGACCACTCTCATTCCCGTCGATTATGCCAAATGGGCTTCTTCCCAGAAATTCCATGTCGGCGACACTCTTCTGTTTAAATACAACAGCACGTTCCACAATGCACTGCAAGTGACTCAAGAACAATACAAAGCTTGCAACTCATCTTCTCCGGTGGCGTCGTACAGCTCCGGCGCAGATTCCATCGTTTTGAAAAGACCTGGAACCTTCTACTTCCTCTGTGGCTTTCCCGGGCACTGTCAACTGGGGCAGAAAGTGGAAGTCAAAGTTACCTCAGGTTCATCCTCTCATTTACCTGCTCCCTCCCCAAGCCCAGGCCCAAGCCCAAGCCCAATGGGCGGCCCATCTGCTTCTGCTCCCACCCCAAGTGCCGCTTCTTCTCTGTCCCACTTCTTCTCTATGCTAATTTGCCTCTCCTTGGAGTTTGCTTTGTTGTACTCTGTGTTTGTTTGA ATGGCTTCTGTGAAGATGCCTTCGCCCTTCTTCTGGATCTCCACAATGGCGCTTTTTACACTCTCGGCTGCTGCCACCGTCCACCAAGTAGGCGACTCTCCCGGTTGGACCACTCTCATTCCCGTCGATTATGCCAAATGGGCTTCTTCCCAGAAATTCCATGTCGGCGACACTCTTCTGTTTAAATACAACAGCACGTTCCACAATGCACTGCAAGTGACTCAAGAACAATACAAAGCTTGCAACTCATCTTCTCCGGTGGCGTCGTACAGCTCCGGCGCAGATTCCATCGTTTTGAAAAGACCTGGAACCTTCTACTTCCTCTGTGGCTTTCCCGGGCACTGTCAACTGGGGCAGAAAGTGGAAGTCAAAGTTACCTCAGGTTCATCCTCTCATTTACCTGCTCCCTCCCCAAGCCCAGGCCCAAGCCCAAGCCCAATGGGCGGCCCATCTGCTTCTGCTCCCACCCCAAGTGCCGCTTCTTCTCTGTCCCACTTCTTCTCTATGCTAATTTGCCTCTCCTTGGAGTTTGCTTTGTTGTACTCTGTGTTTGTTTGA
BLAST of CSPI06G22140 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 8.7e-48 Identity = 87/107 (81.31%), Postives = 95/107 (88.79%), Query Frame = 1
BLAST of CSPI06G22140 vs. Swiss-Prot
Match: STEL_TOXVR (Stellacyanin OS=Toxicodendron vernicifluum PE=1 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 7.1e-26 Identity = 54/104 (51.92%), Postives = 73/104 (70.19%), Query Frame = 1
BLAST of CSPI06G22140 vs. Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.8e-21 Identity = 60/142 (42.25%), Postives = 88/142 (61.97%), Query Frame = 1
BLAST of CSPI06G22140 vs. Swiss-Prot
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2) HSP 1 Score: 95.1 bits (235), Expect = 8.5e-19 Identity = 60/157 (38.22%), Postives = 89/157 (56.69%), Query Frame = 1
BLAST of CSPI06G22140 vs. Swiss-Prot
Match: ENL3_ARATH (Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090 PE=1 SV=2) HSP 1 Score: 90.5 bits (223), Expect = 2.1e-17 Identity = 49/129 (37.98%), Postives = 78/129 (60.47%), Query Frame = 1
BLAST of CSPI06G22140 vs. TrEMBL
Match: A0A0A0KHQ2_CUCSA (Mavicyanin OS=Cucumis sativus GN=Csa_6G410670 PE=4 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 2.4e-97 Identity = 184/185 (99.46%), Postives = 184/185 (99.46%), Query Frame = 1
BLAST of CSPI06G22140 vs. TrEMBL
Match: A0A0D2TEI5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G137200 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 2.2e-37 Identity = 81/150 (54.00%), Postives = 108/150 (72.00%), Query Frame = 1
BLAST of CSPI06G22140 vs. TrEMBL
Match: A0A0B0MJN1_GOSAR (Mavicyanin OS=Gossypium arboreum GN=F383_17918 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 5.3e-36 Identity = 80/150 (53.33%), Postives = 106/150 (70.67%), Query Frame = 1
BLAST of CSPI06G22140 vs. TrEMBL
Match: B9HAI3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s27520g PE=4 SV=2) HSP 1 Score: 154.8 bits (390), Expect = 1.0e-34 Identity = 76/157 (48.41%), Postives = 111/157 (70.70%), Query Frame = 1
BLAST of CSPI06G22140 vs. TrEMBL
Match: V4U5W6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018211mg PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.3e-34 Identity = 83/169 (49.11%), Postives = 112/169 (66.27%), Query Frame = 1
BLAST of CSPI06G22140 vs. TAIR10
Match: AT2G31050.1 (AT2G31050.1 Cupredoxin superfamily protein) HSP 1 Score: 138.7 bits (348), Expect = 3.8e-33 Identity = 69/150 (46.00%), Postives = 96/150 (64.00%), Query Frame = 1
BLAST of CSPI06G22140 vs. TAIR10
Match: AT5G26330.1 (AT5G26330.1 Cupredoxin superfamily protein) HSP 1 Score: 130.6 bits (327), Expect = 1.0e-30 Identity = 68/150 (45.33%), Postives = 97/150 (64.67%), Query Frame = 1
BLAST of CSPI06G22140 vs. TAIR10
Match: AT2G26720.1 (AT2G26720.1 Cupredoxin superfamily protein) HSP 1 Score: 128.3 bits (321), Expect = 5.1e-30 Identity = 72/185 (38.92%), Postives = 104/185 (56.22%), Query Frame = 1
BLAST of CSPI06G22140 vs. TAIR10
Match: AT2G32300.1 (AT2G32300.1 uclacyanin 1) HSP 1 Score: 96.3 bits (238), Expect = 2.1e-20 Identity = 55/158 (34.81%), Postives = 83/158 (52.53%), Query Frame = 1
BLAST of CSPI06G22140 vs. TAIR10
Match: AT2G25060.1 (AT2G25060.1 early nodulin-like protein 14) HSP 1 Score: 95.1 bits (235), Expect = 4.8e-20 Identity = 60/157 (38.22%), Postives = 89/157 (56.69%), Query Frame = 1
BLAST of CSPI06G22140 vs. NCBI nr
Match: gi|449444673|ref|XP_004140098.1| (PREDICTED: mavicyanin [Cucumis sativus]) HSP 1 Score: 362.8 bits (930), Expect = 3.5e-97 Identity = 184/185 (99.46%), Postives = 184/185 (99.46%), Query Frame = 1
BLAST of CSPI06G22140 vs. NCBI nr
Match: gi|659097080|ref|XP_008449431.1| (PREDICTED: mavicyanin-like [Cucumis melo]) HSP 1 Score: 317.4 bits (812), Expect = 1.7e-83 Identity = 162/185 (87.57%), Postives = 170/185 (91.89%), Query Frame = 1
BLAST of CSPI06G22140 vs. NCBI nr
Match: gi|56966965|pdb|1WS7|A (Chain A, Crystal Structure Of Mavicyanin From Cucurbita Pepo Medullosa (Zucchini)) HSP 1 Score: 191.4 bits (485), Expect = 1.4e-45 Identity = 87/107 (81.31%), Postives = 95/107 (88.79%), Query Frame = 1
BLAST of CSPI06G22140 vs. NCBI nr
Match: gi|2493319|sp|P80728.1|MAVI_CUCPE (RecName: Full=Mavicyanin) HSP 1 Score: 191.4 bits (485), Expect = 1.4e-45 Identity = 87/107 (81.31%), Postives = 95/107 (88.79%), Query Frame = 1
BLAST of CSPI06G22140 vs. NCBI nr
Match: gi|823188635|ref|XP_012490569.1| (PREDICTED: mavicyanin-like [Gossypium raimondii]) HSP 1 Score: 163.7 bits (413), Expect = 3.1e-37 Identity = 81/150 (54.00%), Postives = 108/150 (72.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |