CSPI06G20450 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAGAGGTGAGCATATGATAAACCCAATTAGTACAAGTATTGTCAGAAAAATAATATTGATATTGATCTGACCGTACTTTACCCACTTTAGGTTGGCCACATTGTTGAGAAAAGATCCAAAAGAAAAATCCCACAAGAGAGAGAGAGAGATAGATAGAGGGAATCCTTTACCTTTCATCATCATACTGAAACAGCAGTGATTGTGTTTCACTTCCATGTGTGTGCTCTTCAATAAACCCACGCCCTTTCCCCTCCCATCTCTTCCCGTGACACTTTAACCTCTCTTTTATTTTTATATATATAAACACTTCCAATCCAAATTATGGCATTCAACCAAAAGCCCAAGTCCCATCCTATCCCATCCATCAATCCCCCTCCTAATTACACTCATTAAACACATCTTACCCGCTTTAATTTCTTTGTCTCCTTCTGTTGCAGACGAGTTGTTCGATAAAATGCCAAGTACGGAATCGTTTCTGAGGCAGATAAGTAGTAGAAGGGGGGAGGGATCTTCTAGATCAACTTCCAGGAGGTGGGGTGGGGAGTTTAGGAGAACTGAAGGTGAAGAGCGTGTCAGTGAAGGGAGTTTCTGGCATCAGAAGATGGAGGGCGGTGGTGTCAACAGTATGCATGGGATTGATAATGGTGGGATGTCAAGAAGGAAGAGGGTGATGGTTGTGGTGGATCATACTTCACAATCTAACCATGCAACCATGTGGGCTCTCACTCATCTCGCTAACAAGGGGGATGTTCTTACTCTTCTTCATGTCATTACAAACTCCTCTACCGACTCTTCTTCTGCTGCAGACTCTGCTTCCTCTTTTTCTGCTAGCTCTCTTGGTTCTCTCTGTAAGGCTTCTAGACCTGAGGTTAGTATAAAATTATTCATTTCAATTCTTCCCTATCTTGCTGATCAGATCATGTCGAAGTATTGATATAATGAAGTTTACCATTATTCATTAGCTTAAGATTTTTGGGTTTCGTTGATGTCTCATCTTTTCCTACTTGTTGGGGAGCTTAGCCATCAGCTTTGAGGTTTCGTATGATGGGTGATTTAACAGATCTCATTCAACGAGACAGATCCCAGTTCCAATTGAACTTAGTGATTAGCTGCATAATGTGTTTTAATGTTCTATATGAAAATTTTCAGGTCGAGGTGGAAGTGCTGGTAATTGAGGGGCCGAAGCTAGCCACAGTGATGAACCAAGTCAAGAAACTAGAGGTGTCGGTGCTGGTTGTGGGACAGAGAAGGCCATCCTTATTCAGCTGGTGGGTCTTAATCTAATCTAATCTAATAATATAACAGACAAATTCCCACTTTAGTTATAAAATATCCAACTCATTTTTGAACTTAAAATGTGGTGTTCTGCAGCTTTTGTGGGAGTGGTGGGGCGGGCGATTTGGTGGAACAGTGCATAAACAATGCAGAGTGTTTGACGATTGGTGTAAGGAAGCAGAGTAGAGACATGGGTGGGTATGTAATCAACACTAGATGGCAGAAAAATTTCTGGCTCCTTGCTTAAGTTTTTAGGAGAGTTAGAGGCTGACCCTCTTTGGAAGTAAGTTATAATGTAATCTAATTAATATAACCTAAGACTACTGCAATCTGTAAAACCATCTACTAACAAGTTTATCATCATCCTATGTCGTAACCATATGAAATTGAACTTTCTAGTCTAACAATCTATAAGAATCAAGAATAAGAGTTTTTCAATTGTGTGAACTGTCTC ATGCCAAGTACGGAATCGTTTCTGAGGCAGATAAGTAGTAGAAGGGGGGAGGGATCTTCTAGATCAACTTCCAGGAGGTGGGGTGGGGAGTTTAGGAGAACTGAAGGTGAAGAGCGTGTCAGTGAAGGGAGTTTCTGGCATCAGAAGATGGAGGGCGGTGGTGTCAACAGTATGCATGGGATTGATAATGGTGGGATGTCAAGAAGGAAGAGGGTGATGGTTGTGGTGGATCATACTTCACAATCTAACCATGCAACCATGTGGGCTCTCACTCATCTCGCTAACAAGGGGGATGTTCTTACTCTTCTTCATGTCATTACAAACTCCTCTACCGACTCTTCTTCTGCTGCAGACTCTGCTTCCTCTTTTTCTGCTAGCTCTCTTGGTTCTCTCTGTAAGGCTTCTAGACCTGAGGTCGAGGTGGAAGTGCTGGTAATTGAGGGGCCGAAGCTAGCCACAGTGATGAACCAAGTCAAGAAACTAGAGGTGTCGGTGCTGGTTGTGGGACAGAGAAGGCCATCCTTATTCAGCTGCTTTTGTGGGAGTGGTGGGGCGGGCGATTTGGTGGAACAGTGCATAAACAATGCAGAGTGTTTGACGATTGGTGTAAGGAAGCAGAGTAGAGACATGGGTGGGTATGTAATCAACACTAGATGGCAGAAAAATTTCTGGCTCCTTGCTTAA ATGCCAAGTACGGAATCGTTTCTGAGGCAGATAAGTAGTAGAAGGGGGGAGGGATCTTCTAGATCAACTTCCAGGAGGTGGGGTGGGGAGTTTAGGAGAACTGAAGGTGAAGAGCGTGTCAGTGAAGGGAGTTTCTGGCATCAGAAGATGGAGGGCGGTGGTGTCAACAGTATGCATGGGATTGATAATGGTGGGATGTCAAGAAGGAAGAGGGTGATGGTTGTGGTGGATCATACTTCACAATCTAACCATGCAACCATGTGGGCTCTCACTCATCTCGCTAACAAGGGGGATGTTCTTACTCTTCTTCATGTCATTACAAACTCCTCTACCGACTCTTCTTCTGCTGCAGACTCTGCTTCCTCTTTTTCTGCTAGCTCTCTTGGTTCTCTCTGTAAGGCTTCTAGACCTGAGGTCGAGGTGGAAGTGCTGGTAATTGAGGGGCCGAAGCTAGCCACAGTGATGAACCAAGTCAAGAAACTAGAGGTGTCGGTGCTGGTTGTGGGACAGAGAAGGCCATCCTTATTCAGCTGCTTTTGTGGGAGTGGTGGGGCGGGCGATTTGGTGGAACAGTGCATAAACAATGCAGAGTGTTTGACGATTGGTGTAAGGAAGCAGAGTAGAGACATGGGTGGGTATGTAATCAACACTAGATGGCAGAAAAATTTCTGGCTCCTTGCTTAA
BLAST of CSPI06G20450 vs. TrEMBL
Match: A0A0A0KDD8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G390130 PE=4 SV=1) HSP 1 Score: 438.0 bits (1125), Expect = 7.3e-120 Identity = 225/227 (99.12%), Postives = 225/227 (99.12%), Query Frame = 1
BLAST of CSPI06G20450 vs. TrEMBL
Match: A5B200_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006651 PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 1.9e-64 Identity = 140/229 (61.14%), Postives = 173/229 (75.55%), Query Frame = 1
BLAST of CSPI06G20450 vs. TrEMBL
Match: F6H0S2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g03000 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 7.4e-64 Identity = 139/229 (60.70%), Postives = 173/229 (75.55%), Query Frame = 1
BLAST of CSPI06G20450 vs. TrEMBL
Match: B9GU49_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s08500g PE=4 SV=2) HSP 1 Score: 242.3 bits (617), Expect = 5.8e-61 Identity = 146/237 (61.60%), Postives = 169/237 (71.31%), Query Frame = 1
BLAST of CSPI06G20450 vs. TrEMBL
Match: M1BHD0_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400017558 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 1.3e-60 Identity = 140/239 (58.58%), Postives = 172/239 (71.97%), Query Frame = 1
BLAST of CSPI06G20450 vs. TAIR10
Match: AT1G44760.1 (AT1G44760.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 218.0 bits (554), Expect = 6.0e-57 Identity = 127/231 (54.98%), Postives = 161/231 (69.70%), Query Frame = 1
BLAST of CSPI06G20450 vs. TAIR10
Match: AT1G69080.1 (AT1G69080.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 100.5 bits (249), Expect = 1.4e-21 Identity = 58/180 (32.22%), Postives = 100/180 (55.56%), Query Frame = 1
BLAST of CSPI06G20450 vs. TAIR10
Match: AT2G03720.1 (AT2G03720.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 99.4 bits (246), Expect = 3.1e-21 Identity = 62/166 (37.35%), Postives = 96/166 (57.83%), Query Frame = 1
BLAST of CSPI06G20450 vs. TAIR10
Match: AT5G17390.1 (AT5G17390.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 90.9 bits (224), Expect = 1.1e-18 Identity = 60/168 (35.71%), Postives = 91/168 (54.17%), Query Frame = 1
BLAST of CSPI06G20450 vs. TAIR10
Match: AT3G03290.1 (AT3G03290.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 84.7 bits (208), Expect = 7.9e-17 Identity = 56/168 (33.33%), Postives = 88/168 (52.38%), Query Frame = 1
BLAST of CSPI06G20450 vs. NCBI nr
Match: gi|449465455|ref|XP_004150443.1| (PREDICTED: uncharacterized protein LOC101206721 [Cucumis sativus]) HSP 1 Score: 438.0 bits (1125), Expect = 1.0e-119 Identity = 225/227 (99.12%), Postives = 225/227 (99.12%), Query Frame = 1
BLAST of CSPI06G20450 vs. NCBI nr
Match: gi|659133390|ref|XP_008466707.1| (PREDICTED: uncharacterized protein LOC103504053 [Cucumis melo]) HSP 1 Score: 423.7 bits (1088), Expect = 2.0e-115 Identity = 220/228 (96.49%), Postives = 225/228 (98.68%), Query Frame = 1
BLAST of CSPI06G20450 vs. NCBI nr
Match: gi|147794988|emb|CAN67424.1| (hypothetical protein VITISV_006651 [Vitis vinifera]) HSP 1 Score: 253.8 bits (647), Expect = 2.8e-64 Identity = 140/229 (61.14%), Postives = 173/229 (75.55%), Query Frame = 1
BLAST of CSPI06G20450 vs. NCBI nr
Match: gi|225459542|ref|XP_002285849.1| (PREDICTED: uncharacterized protein LOC100248801 [Vitis vinifera]) HSP 1 Score: 251.9 bits (642), Expect = 1.1e-63 Identity = 139/229 (60.70%), Postives = 173/229 (75.55%), Query Frame = 1
BLAST of CSPI06G20450 vs. NCBI nr
Match: gi|566156935|ref|XP_002302239.2| (hypothetical protein POPTR_0002s08500g [Populus trichocarpa]) HSP 1 Score: 242.3 bits (617), Expect = 8.4e-61 Identity = 146/237 (61.60%), Postives = 169/237 (71.31%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|