CSPI06G19180 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGTGAGTGGTGCATTGCATTATGTACTGTCTTGTGGCTGCTAAGAGGAGATAGTTCCTGGCATCTTCCATTGGACTTCATTACTTCATTACTTCATCAAAATCATAAAGCCACTGCCCTATAAATATAAGCATATGAGAAGGGGTTTTTGTAAATTGTAATTCATAAGAAGTCTTTACAAGTAATATAATCATAATGTCAAAAGCAGGGGCAAAGAATGAAGAGGCAACAGTAGTATCTATAGATACTGCAAGTGAAAATAAAAGGGATAGAGAAGAGAAGAACAGTGGTTGGATGAAACCAGGAGATGTGGATTTTGTAATGGTAAGTCCTTCAATTTCTCTGCTCTTTTTGTTTCTCCCTCTGGCCTCTATCCGTTATTAGTGGTTGGATGGAGCTTTCATTACTGTTTCATTTTCTTTTGCTCACCTTATTATTTGTCAATTTCACGACAGGTTGTCGTAACATTCATCGCAGCCGTGGCATTCCAAGTAGGAATAAACCCACCGGGCAGTGTATGGCAGGAGGACAAGAATGGTTTTACTGCAGGTAAATCAATAATGGCATCAAAATCACCTTCGGAATACAAGAAATTCATGGCGGGAGTGACACTATGTCTTGGATTTTCATTGATCCAGTTATGTGTGATGTTATTCAGATGGTATCTCAAAAGTTATTCAGTTAGGAGAATGATTATGTACATACTGATGCTGTGTACAATAGCGCCAATGATTGTTTCGTTTTGGGCCTCTGTTAAAGCTTTGACACCTGATGAAAAACTAATGTCTGAGATCACTGCTACCATATGGTCTATTTTGGGAGTCTATCTTATAAGTCTCCCAATTATTCTTCTATACTACCTAGTCAAGACGTTCTTGTGAGTTATATCATTTTCCTAATGTTTTATCTTCTATTAATTTCTTTAATTCATAAAAAAAATCATTGTAATTTGTTTAATTTTCTTTTGTAAGTTTTGAGTTAATAAACTTCAATTGAGATTTGTTATTTGGTTTCTAATAGTTAACTGTACTCTCCCTTTGCATGGTATGGTGGAC ATGTCAAAAGCAGGGGCAAAGAATGAAGAGGCAACAGTAGTATCTATAGATACTGCAAGTGAAAATAAAAGGGATAGAGAAGAGAAGAACAGTGGTTGGATGAAACCAGGAGATGTGGATTTTGTAATGGTTGTCGTAACATTCATCGCAGCCGTGGCATTCCAAGTAGGAATAAACCCACCGGGCAGTGTATGGCAGGAGGACAAGAATGGTTTTACTGCAGGTAAATCAATAATGGCATCAAAATCACCTTCGGAATACAAGAAATTCATGGCGGGAGTGACACTATGTCTTGGATTTTCATTGATCCAGTTATGTGTGATGTTATTCAGATGGTATCTCAAAAGTTATTCAGTTAGGAGAATGATTATGTACATACTGATGCTGTGTACAATAGCGCCAATGATTGTTTCGTTTTGGGCCTCTGTTAAAGCTTTGACACCTGATGAAAAACTAATGTCTGAGATCACTGCTACCATATGGTCTATTTTGGGAGTCTATCTTATAAGTCTCCCAATTATTCTTCTATACTACCTAGTCAAGACGTTCTTGTGA ATGTCAAAAGCAGGGGCAAAGAATGAAGAGGCAACAGTAGTATCTATAGATACTGCAAGTGAAAATAAAAGGGATAGAGAAGAGAAGAACAGTGGTTGGATGAAACCAGGAGATGTGGATTTTGTAATGGTTGTCGTAACATTCATCGCAGCCGTGGCATTCCAAGTAGGAATAAACCCACCGGGCAGTGTATGGCAGGAGGACAAGAATGGTTTTACTGCAGGTAAATCAATAATGGCATCAAAATCACCTTCGGAATACAAGAAATTCATGGCGGGAGTGACACTATGTCTTGGATTTTCATTGATCCAGTTATGTGTGATGTTATTCAGATGGTATCTCAAAAGTTATTCAGTTAGGAGAATGATTATGTACATACTGATGCTGTGTACAATAGCGCCAATGATTGTTTCGTTTTGGGCCTCTGTTAAAGCTTTGACACCTGATGAAAAACTAATGTCTGAGATCACTGCTACCATATGGTCTATTTTGGGAGTCTATCTTATAAGTCTCCCAATTATTCTTCTATACTACCTAGTCAAGACGTTCTTGTGA
BLAST of CSPI06G19180 vs. TrEMBL
Match: A0A0A0KIL3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363520 PE=4 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 1.2e-93 Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 1
BLAST of CSPI06G19180 vs. TrEMBL
Match: A0A0A0KGU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363530 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 9.7e-22 Identity = 75/184 (40.76%), Postives = 112/184 (60.87%), Query Frame = 1
BLAST of CSPI06G19180 vs. TrEMBL
Match: A0A0A0KFJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363010 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 5.7e-14 Identity = 59/174 (33.91%), Postives = 98/174 (56.32%), Query Frame = 1
BLAST of CSPI06G19180 vs. TrEMBL
Match: A0A0D2U128_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G109800 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.9e-09 Identity = 45/119 (37.82%), Postives = 74/119 (62.18%), Query Frame = 1
BLAST of CSPI06G19180 vs. TrEMBL
Match: A0A061E2M2_THECC (Ankyrin repeat family protein OS=Theobroma cacao GN=TCM_005770 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.2e-08 Identity = 42/124 (33.87%), Postives = 74/124 (59.68%), Query Frame = 1
BLAST of CSPI06G19180 vs. NCBI nr
Match: gi|449452915|ref|XP_004144204.1| (PREDICTED: uncharacterized protein LOC101208403 [Cucumis sativus]) HSP 1 Score: 350.5 bits (898), Expect = 1.8e-93 Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 1
BLAST of CSPI06G19180 vs. NCBI nr
Match: gi|659089463|ref|XP_008445521.1| (PREDICTED: uncharacterized protein LOC103488512 [Cucumis melo]) HSP 1 Score: 315.8 bits (808), Expect = 4.8e-83 Identity = 161/184 (87.50%), Postives = 174/184 (94.57%), Query Frame = 1
BLAST of CSPI06G19180 vs. NCBI nr
Match: gi|778715279|ref|XP_011657373.1| (PREDICTED: uncharacterized protein LOC105435852 [Cucumis sativus]) HSP 1 Score: 111.7 bits (278), Expect = 1.4e-21 Identity = 75/184 (40.76%), Postives = 112/184 (60.87%), Query Frame = 1
BLAST of CSPI06G19180 vs. NCBI nr
Match: gi|659089597|ref|XP_008445596.1| (PREDICTED: uncharacterized protein LOC103488576 [Cucumis melo]) HSP 1 Score: 110.5 bits (275), Expect = 3.1e-21 Identity = 72/174 (41.38%), Postives = 110/174 (63.22%), Query Frame = 1
BLAST of CSPI06G19180 vs. NCBI nr
Match: gi|449452917|ref|XP_004144205.1| (PREDICTED: uncharacterized protein LOC101208645 [Cucumis sativus]) HSP 1 Score: 85.9 bits (211), Expect = 8.2e-14 Identity = 59/174 (33.91%), Postives = 98/174 (56.32%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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