CSPI06G17390 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAGCTACTTGTGGATCATGTCGAGGTCTCAAAAATCACTAAGGCTATGATTGAAGAACTTAGAGGCTCTCATGGCAAGGACATCCACGACCTCATTGTGGAGGTAACCAACATGCGCAAGTTCATGGAAGAGGAGCTCCATGCATTGCGTAAGGACGTCGACGAGGTACGTGCTGAATGTCTATCTAGACATAATGCTAATGGTACGGCATCCACTAGCACATCACACGTCATGGCCAGCACGCATCACATAAAAGTGCCAAAGCCCGAGATGTATAACGGCACGAGAAATGCCACAATTGTGGAGAATTTCCTATTCGGCCTTGAGCAATATTATGAGGCCCTAGGAATCGTCGACGATGGTGCCAAAATTGCGAACGCCCCAAATTTCCTACGTGAAGCAGCACAACTTTGGTGGCGTAGAAAGCATGCGGAACGGGAGAAGGACCGAAGCATCTTGCGAACGTGGGAGCAATTCAAAGGTGAGCTTCGAAAACACTTTGTCCCACATAATGCAGAGATGGAGGCCCGTGGTAAACTCAGACGGTTAAGACAAACCGGAAGTATTCCCGAGTACGTGAAGGAATTCACAACCCTCATGTTGGAAATCGATGACATGTCCGACAAAGACGCACTCTTTCATTTTCGAGATGGTCTCAAAGATTGGGCAAGACTGGAACTCGACCGACGGAATGTGCAGAATCTCGATGATGCCATTGCCACCGTAGAGACACTCACGGATTACCGACCCAAAGAAAAGAGAACAAACGAAAGTGGAGGAGAAGTGTCGGAGAAAAAAAAGGAACATGCCCACAAGGCGGGGGATAGCCACAGGGATAGTGGAAGGCACGGGAAAGCCACGGAAGCGAAGAAAGGTACATCTTTCAAAACTCCTAGCCCTTGTTTTCTCTGCAACGGTCCACATTGGGCAAGAGATTGTCCACAAAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTAG ATGGAGGAGCTACTTGTGGATCATGTCGAGGTCTCAAAAATCACTAAGGCTATGATTGAAGAACTTAGAGGCTCTCATGGCAAGGACATCCACGACCTCATTGTGGAGGTAACCAACATGCGCAAGTTCATGGAAGAGGAGCTCCATGCATTGCGTAAGGACGTCGACGAGGTACGTGCTGAATGTCTATCTAGACATAATGCTAATGGTACGGCATCCACTAGCACATCACACGTCATGGCCAGCACGCATCACATAAAAGTGCCAAAGCCCGAGATGTATAACGGCACGAGAAATGCCACAATTGTGGAGAATTTCCTATTCGGCCTTGAGCAATATTATGAGGCCCTAGGAATCGTCGACGATGGTGCCAAAATTGCGAACGCCCCAAATTTCCTACGTGAAGCAGCACAACTTTGGTGGCGTAGAAAGCATGCGGAACGGGAGAAGGACCGAAGCATCTTGCGAACGTGGGAGCAATTCAAAGGTGAGCTTCGAAAACACTTTGTCCCACATAATGCAGAGATGGAGGCCCGTGGTAAACTCAGACGGTTAAGACAAACCGGAAGTATTCCCGAGTACGTGAAGGAATTCACAACCCTCATGTTGGAAATCGATGACATGTCCGACAAAGACGCACTCTTTCATTTTCGAGATGGTCTCAAAGATTGGGCAAGACTGGAACTCGACCGACGGAATGTGCAGAATCTCGATGATGCCATTGCCACCGTAGAGACACTCACGGATTACCGACCCAAAGAAAAGAGAACAAACGAAAGTGGAGGAGAAGTGTCGGAGAAAAAAAAGGAACATGCCCACAAGGCGGGGGATAGCCACAGGGATAGTGGAAGGCACGGGAAAGCCACGGAAGCGAAGAAAGGTACATCTTTCAAAACTCCTAGCCCTTGTTTTCTCTGCAACGGTCCACATTGGGCAAGAGATTGTCCACAAAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTAG ATGGAGGAGCTACTTGTGGATCATGTCGAGGTCTCAAAAATCACTAAGGCTATGATTGAAGAACTTAGAGGCTCTCATGGCAAGGACATCCACGACCTCATTGTGGAGGTAACCAACATGCGCAAGTTCATGGAAGAGGAGCTCCATGCATTGCGTAAGGACGTCGACGAGGTACGTGCTGAATGTCTATCTAGACATAATGCTAATGGTACGGCATCCACTAGCACATCACACGTCATGGCCAGCACGCATCACATAAAAGTGCCAAAGCCCGAGATGTATAACGGCACGAGAAATGCCACAATTGTGGAGAATTTCCTATTCGGCCTTGAGCAATATTATGAGGCCCTAGGAATCGTCGACGATGGTGCCAAAATTGCGAACGCCCCAAATTTCCTACGTGAAGCAGCACAACTTTGGTGGCGTAGAAAGCATGCGGAACGGGAGAAGGACCGAAGCATCTTGCGAACGTGGGAGCAATTCAAAGGTGAGCTTCGAAAACACTTTGTCCCACATAATGCAGAGATGGAGGCCCGTGGTAAACTCAGACGGTTAAGACAAACCGGAAGTATTCCCGAGTACGTGAAGGAATTCACAACCCTCATGTTGGAAATCGATGACATGTCCGACAAAGACGCACTCTTTCATTTTCGAGATGGTCTCAAAGATTGGGCAAGACTGGAACTCGACCGACGGAATGTGCAGAATCTCGATGATGCCATTGCCACCGTAGAGACACTCACGGATTACCGACCCAAAGAAAAGAGAACAAACGAAAGTGGAGGAGAAGTGTCGGAGAAAAAAAAGGAACATGCCCACAAGGCGGGGGATAGCCACAGGGATAGTGGAAGGCACGGGAAAGCCACGGAAGCGAAGAAAGGTACATCTTTCAAAACTCCTAGCCCTTGTTTTCTCTGCAACGGTCCACATTGGGCAAGAGATTGTCCACAAAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTAG
BLAST of CSPI06G17390 vs. TrEMBL
Match: A5APM4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019786 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 3.2e-48 Identity = 124/325 (38.15%), Postives = 183/325 (56.31%), Query Frame = 1
BLAST of CSPI06G17390 vs. TrEMBL
Match: A5BCF9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006829 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 5.5e-48 Identity = 121/325 (37.23%), Postives = 185/325 (56.92%), Query Frame = 1
BLAST of CSPI06G17390 vs. TrEMBL
Match: A5C7F1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006667 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 7.2e-48 Identity = 112/290 (38.62%), Postives = 168/290 (57.93%), Query Frame = 1
BLAST of CSPI06G17390 vs. TrEMBL
Match: A5C3H4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015921 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 9.4e-48 Identity = 110/290 (37.93%), Postives = 169/290 (58.28%), Query Frame = 1
BLAST of CSPI06G17390 vs. TrEMBL
Match: A5BF11_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001034 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 9.4e-48 Identity = 118/321 (36.76%), Postives = 173/321 (53.89%), Query Frame = 1
BLAST of CSPI06G17390 vs. NCBI nr
Match: gi|802621793|ref|XP_012076137.1| (PREDICTED: uncharacterized protein LOC105637312 [Jatropha curcas]) HSP 1 Score: 316.2 bits (809), Expect = 1.3e-82 Identity = 161/286 (56.29%), Postives = 205/286 (71.68%), Query Frame = 1
BLAST of CSPI06G17390 vs. NCBI nr
Match: gi|659068885|ref|XP_008446938.1| (PREDICTED: uncharacterized protein LOC103489499 [Cucumis melo]) HSP 1 Score: 314.3 bits (804), Expect = 4.9e-82 Identity = 163/328 (49.70%), Postives = 221/328 (67.38%), Query Frame = 1
BLAST of CSPI06G17390 vs. NCBI nr
Match: gi|659111573|ref|XP_008455798.1| (PREDICTED: uncharacterized protein LOC103495894 [Cucumis melo]) HSP 1 Score: 310.5 bits (794), Expect = 7.1e-81 Identity = 163/302 (53.97%), Postives = 208/302 (68.87%), Query Frame = 1
BLAST of CSPI06G17390 vs. NCBI nr
Match: gi|985465103|ref|XP_015389228.1| (PREDICTED: uncharacterized protein LOC107178484 [Citrus sinensis]) HSP 1 Score: 299.7 bits (766), Expect = 1.3e-77 Identity = 162/320 (50.62%), Postives = 218/320 (68.12%), Query Frame = 1
BLAST of CSPI06G17390 vs. NCBI nr
Match: gi|568882001|ref|XP_006493831.1| (PREDICTED: uncharacterized protein LOC102625991 [Citrus sinensis]) HSP 1 Score: 294.3 bits (752), Expect = 5.3e-76 Identity = 159/320 (49.69%), Postives = 215/320 (67.19%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |