CSPI06G16920 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G16920
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionRing finger protein, putative
LocationChr6 : 15286893 .. 15287399 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTTTCCAGGTATACCACGAGGTGCAAAATACGGCTTGATCATCGGCGTTGGAATCCCGGGCCTTCTCTTTCTAATCGGGCTGGTGTTTTACATCTGCGGCAAGTGCAAGGCCTTTGCTCGGCCCAATCGTCCAACTTCAAACCTTTCCCTTTCATTGGGCCATGAGCCCACTTCTACCAAAGCAGGCCTCGATGGCCCAACAATCGAATCATTCCCGAAAACAACATTGGGCCAGAGTCGACGACTTCCAAAGTCCAACGACACCACATGCGCCATTTGCTTGTCAGAGTACCAATCAAAGGAGACAATTAGAACTATACCAGATTGTGGTCACTTCTTTCATGCTAACTGTGTTGATGAGTGGCTTAAATTGAATGCCACGTGTCCAGTGTGTCGAACCTCGCCCGACGATTCTTCCGCCACCTCCACGCCTTCTCAATCAACGTCCGTGTCTGTGTCGTTGCCAACGTCACCCCGATTGTTGTCGCGTAATGATGACTAG

mRNA sequence

ATGAATTTTCCAGGTATACCACGAGGTGCAAAATACGGCTTGATCATCGGCGTTGGAATCCCGGGCCTTCTCTTTCTAATCGGGCTGGTGTTTTACATCTGCGGCAAGTGCAAGGCCTTTGCTCGGCCCAATCGTCCAACTTCAAACCTTTCCCTTTCATTGGGCCATGAGCCCACTTCTACCAAAGCAGGCCTCGATGGCCCAACAATCGAATCATTCCCGAAAACAACATTGGGCCAGAGTCGACGACTTCCAAAGTCCAACGACACCACATGCGCCATTTGCTTGTCAGAGTACCAATCAAAGGAGACAATTAGAACTATACCAGATTGTGGTCACTTCTTTCATGCTAACTGTGTTGATGAGTGGCTTAAATTGAATGCCACGTGTCCAGTGTGTCGAACCTCGCCCGACGATTCTTCCGCCACCTCCACGCCTTCTCAATCAACGTCCGTGTCTGTGTCGTTGCCAACGTCACCCCGATTGTTGTCGCGTAATGATGACTAG

Coding sequence (CDS)

ATGAATTTTCCAGGTATACCACGAGGTGCAAAATACGGCTTGATCATCGGCGTTGGAATCCCGGGCCTTCTCTTTCTAATCGGGCTGGTGTTTTACATCTGCGGCAAGTGCAAGGCCTTTGCTCGGCCCAATCGTCCAACTTCAAACCTTTCCCTTTCATTGGGCCATGAGCCCACTTCTACCAAAGCAGGCCTCGATGGCCCAACAATCGAATCATTCCCGAAAACAACATTGGGCCAGAGTCGACGACTTCCAAAGTCCAACGACACCACATGCGCCATTTGCTTGTCAGAGTACCAATCAAAGGAGACAATTAGAACTATACCAGATTGTGGTCACTTCTTTCATGCTAACTGTGTTGATGAGTGGCTTAAATTGAATGCCACGTGTCCAGTGTGTCGAACCTCGCCCGACGATTCTTCCGCCACCTCCACGCCTTCTCAATCAACGTCCGTGTCTGTGTCGTTGCCAACGTCACCCCGATTGTTGTCGCGTAATGATGACTAG
Homology
[Close]
BLAST of CSPI06G16920 vs. Swiss-Prot
Match: ATL69_ARATH (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana GN=ATL69 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 9.7e-30
Identity = 63/132 (47.73%), Postives = 85/132 (64.39%), Query Frame = 1 

Query: 9   GAKYGLIIGVGIPGLLFLIGLVFYICGKCKAFARPNRPTSNLSLSLGHEPTSTKAGLDGP 68
           G  YG+ I V I  L+  I L  YIC + K+  R +  TS++ L L       K GLD P
Sbjct: 12  GLGYGIAIAVSILVLISFIMLASYICIRSKSTGR-DEATSDVVLDLPSPAAEVKLGLDRP 71

Query: 69  TIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWLKLNA 128
            IES+P+  LG SRRLP+ N+  C+ICL +Y+++E +R IP+C H FH +CVDEWL+ +A
Sbjct: 72  VIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSA 131

Query: 129 TCPVCRTSPDDS 141
           TCP+CR SP  S
Sbjct: 132 TCPLCRNSPAPS 142

[Close]
BLAST of CSPI06G16920 vs. Swiss-Prot
Match: ATL22_ARATH (RING-H2 finger protein ATL22 OS=Arabidopsis thaliana GN=ATL22 PE=2 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 1.0e-23
Identity = 57/122 (46.72%), Postives = 81/122 (66.39%), Query Frame = 1 

Query: 20  IPGLLFLIGLVFYICGKCKAFARPNRPT-SNLSLSLGHEPTSTKA--GLDGPTIESFPKT 79
           +  L F +GLV  +C   +  ++  +   + LS S+  +P++  A  GLD  TIES+ K 
Sbjct: 253 LTALTFCVGLV--MCSSERVSSQIQQAVVARLSGSVTSQPSNEVARIGLDESTIESYKKV 312

Query: 80  TLGQSRRLPK-SNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWLKLNATCPVCRT 138
            LG+SRRLP  SND  C ICLSEY +KET+R +P+C H FH  C+D WLKL+++CPVCR+
Sbjct: 313 ELGESRRLPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHSSCPVCRS 372

[Close]
BLAST of CSPI06G16920 vs. Swiss-Prot
Match: ATL20_ARATH (RING-H2 finger protein ATL20 OS=Arabidopsis thaliana GN=ATL20 PE=2 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 1.5e-22
Identity = 45/73 (61.64%), Postives = 56/73 (76.71%), Query Frame = 1 

Query: 64  GLDGPTIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEW 123
           GLD  TIES+ K  LG+SRRLP +N   C ICLSEY SKET+R +P+C H FH  C+DEW
Sbjct: 225 GLDQSTIESYKKVELGESRRLPGTNGIICPICLSEYASKETVRCMPECDHCFHVQCIDEW 284

Query: 124 LKLNATCPVCRTS 137
           LK++++CPVCR S
Sbjct: 285 LKIHSSCPVCRNS 297

[Close]
BLAST of CSPI06G16920 vs. Swiss-Prot
Match: AT21A_ARATH (Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana GN=ATL21A PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 7.4e-22
Identity = 46/75 (61.33%), Postives = 57/75 (76.00%), Query Frame = 1 

Query: 64  GLDGPTIESFPKTTLGQSRRLPKSNDT-TCAICLSEYQSKETIRTIPDCGHFFHANCVDE 123
           GLD   IES+ KT LG+SRRLP +ND   C ICLSEY SKET+R IP+C H FH+ C+D 
Sbjct: 291 GLDESIIESYKKTELGESRRLPGNNDDIVCPICLSEYASKETVRCIPECDHCFHSECIDV 350

Query: 124 WLKLNATCPVCRTSP 138
           WLK++ +CP+CR SP
Sbjct: 351 WLKIHGSCPLCRNSP 365

[Close]
BLAST of CSPI06G16920 vs. Swiss-Prot
Match: ATL70_ARATH (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 6.3e-21
Identity = 49/132 (37.12%), Postives = 75/132 (56.82%), Query Frame = 1 

Query: 9   GAKYGLIIGVGIPGLLFLIGLVFYICGKCKAFARP---NRPTSNLSLSLGHEPTSTKAGL 68
           G +YG+ + +G+  L+  I L  Y C + +  + P   N+ ++ +     H       GL
Sbjct: 63  GFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSSPSQTNQDSTRIHHHHHHVIIDVVPGL 122

Query: 69  DGPTIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWLK 128
           D  TI+S+PK    +++    +  + CAICL +Y+ K  +R +PDC H FH  C+D WL+
Sbjct: 123 DEDTIQSYPKILYSEAKG--PTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLR 182

Query: 129 LNATCPVCRTSP 138
           LN TCPVCRTSP
Sbjct: 183 LNPTCPVCRTSP 192

[Close]
BLAST of CSPI06G16920 vs. TrEMBL
Match: A0A0A0KUW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G051570 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.4e-88
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 1 

Query: 5   GIPRGAKYGLIIGVGIPGLLFLIGLVFYICGKCKAFARPNRPTSNLSLSLGHEPTSTKAG 64
           GIPRGAKYGLIIGVGIPGLLFLIGLVFYICGKCKAFARPNRPTSNLSLSLGHEPTSTKAG
Sbjct: 230 GIPRGAKYGLIIGVGIPGLLFLIGLVFYICGKCKAFARPNRPTSNLSLSLGHEPTSTKAG 289

Query: 65  LDGPTIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWL 124
           LDGPTIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWL
Sbjct: 290 LDGPTIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWL 349

Query: 125 KLNATCPVCRTSPDDSSATSTPSQSTSVSVSLPTSPRLLSRNDD 169
           KLNATCPVCRTSPDDSSATSTPSQSTSVSVSLPTSPR LSRNDD
Sbjct: 350 KLNATCPVCRTSPDDSSATSTPSQSTSVSVSLPTSPRSLSRNDD 393

[Close]
BLAST of CSPI06G16920 vs. TrEMBL
Match: M5X0E9_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019102m2g PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 8.5e-49
Identity = 92/153 (60.13%), Postives = 115/153 (75.16%), Query Frame = 1 

Query: 6   IPRGAKYGLIIGVGIPGLLFLIGLVFYICGKCKAFARPNRPTSNLSLSLGHEPTSTKAGL 65
           +PR AKYG+IIGV IPG L ++GL  Y+CG+  A+ R N+P  +LS S   +P     GL
Sbjct: 1   LPRSAKYGIIIGVVIPGFLCILGLASYVCGRINAYGRRNQPDMDLSTSASQQPAIVVVGL 60

Query: 66  DGPTIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWLK 125
           D PTIES+PKT LG+SRRLPK NDTTC+ICL EYQ KE +RTIP+C H+FHA+CVDEWLK
Sbjct: 61  DSPTIESYPKTLLGESRRLPKPNDTTCSICLGEYQPKEELRTIPECNHYFHASCVDEWLK 120

Query: 126 LNATCPVCRTSPDDSSATSTPSQSTSVSVSLPT 159
           +NATCPVCR SP+ S+  +  S  +S S SLP+
Sbjct: 121 MNATCPVCRKSPEGSALVTPSSSMSSSSTSLPS 153

[Close]
BLAST of CSPI06G16920 vs. TrEMBL
Match: B9GL60_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s10610g PE=4 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 3.2e-48
Identity = 95/153 (62.09%), Postives = 114/153 (74.51%), Query Frame = 1 

Query: 6   IPRGAKYGLIIGVGIPGLLFLIGLVFYICGKCKAFARPNRPTSNLSLSLGHEPTSTKAGL 65
           +PR AKYG+IIG GIPGLL +IG+V Y+ G+ KA +  N PT+ +S S+  +P     GL
Sbjct: 225 LPRSAKYGIIIGAGIPGLLCIIGIVSYVFGRLKARSSGNEPTTEMSTSVAPQPCVVVTGL 284

Query: 66  DGPTIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWLK 125
           DGPTIES+PKT LG S RLPK ND TC ICLSEYQ K+T+RTIP+C H+FHANCVDEWLK
Sbjct: 285 DGPTIESYPKTQLGDSGRLPKPNDNTCPICLSEYQPKDTLRTIPNCNHYFHANCVDEWLK 344

Query: 126 LNATCPVCRTSPDDSSATSTPSQSTSVSVSLPT 159
           +NATCP+CR SPD SS  +  S  TS   SL T
Sbjct: 345 MNATCPLCRNSPDGSSVMTHSSSLTSSYSSLST 377

[Close]
BLAST of CSPI06G16920 vs. TrEMBL
Match: W9QMH5_9ROSA (RING-H2 finger protein ATL22 OS=Morus notabilis GN=L484_001528 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 9.4e-48
Identity = 94/151 (62.25%), Postives = 114/151 (75.50%), Query Frame = 1 

Query: 5   GIPRGAKYGLIIGVGIPGLLFLIGLVFYICGKCKAFARPNRPTSNLSLSLGHEPTSTKAG 64
           G+ RGAKYG+ +GVGIPGL+ +IGL  YICG+ +A  R  RP S+ + +   EP     G
Sbjct: 264 GLSRGAKYGITVGVGIPGLICIIGLASYICGRIRACGRRRRPYSDNASADTPEPVVVLLG 323

Query: 65  LDGPTIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWL 124
            D PTIESFPK  LG+S+RLPK +D TC ICLSEYQ KET+RTIP+C H+FHANCVDEWL
Sbjct: 324 FDRPTIESFPKIELGESKRLPKPSDNTCPICLSEYQPKETLRTIPECNHYFHANCVDEWL 383

Query: 125 KLNATCPVCRTSPDDSSATSTPSQSTSVSVS 156
           K+NATCPVCR SPD +S+  +PS S SVS S
Sbjct: 384 KMNATCPVCRNSPDGTSSRVSPSTSVSVSSS 414

[Close]
BLAST of CSPI06G16920 vs. TrEMBL
Match: B9GXI1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s13970g PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.4e-46
Identity = 89/154 (57.79%), Postives = 115/154 (74.68%), Query Frame = 1 

Query: 6   IPRGAKYGLIIGVGIPGLLFLIGLVFYICGKCKAFARPNRPTSNLSLSLGHEPTSTKAGL 65
           +PR AKYG+++G GIPGLL + G+  Y+ G+ K ++  N+PT+  S ++  +P+    GL
Sbjct: 230 LPRSAKYGIVLGAGIPGLLCIFGIGSYLFGRLKEYSGGNQPTTEFSTAIAPQPSVVITGL 289

Query: 66  DGPTIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWLK 125
           D PTIES+PKT LG S RLPK ND TC ICLSEYQ K+T+RTIPDC H+FHANC+DEWLK
Sbjct: 290 DAPTIESYPKTQLGDSGRLPKPNDNTCPICLSEYQPKDTLRTIPDCSHYFHANCIDEWLK 349

Query: 126 LNATCPVCRTSPDDSS--ATSTPSQSTSVSVSLP 158
           +NATCP+CR SPD SS    S+P  S+S S+S P
Sbjct: 350 MNATCPLCRNSPDGSSVMTPSSPLSSSSSSLSTP 383

[Close]
BLAST of CSPI06G16920 vs. TAIR10
Match: AT5G53110.1 (AT5G53110.1 RING/U-box superfamily protein)

HSP 1 Score: 161.4 bits (407), Expect = 4.9e-40
Identity = 76/139 (54.68%), Postives = 97/139 (69.78%), Query Frame = 1 

Query: 4   PGIPRGAKYGLIIGVGIPGLLFLIGLVFYICGKCKAFARPNR--PTSNLSLSLGHEPTST 63
           P IPR A+Y + +G GIPG L + GL  ++  K  +  +  R  PT  ++ +  H   S+
Sbjct: 238 PAIPRRARYAIAVGAGIPGALIVFGLFCFVYSKISSCIKRRRLVPTPEINNAQAHYLHSS 297

Query: 64  KA--GLDGPTIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANC 123
               GLDGPTIES+PK  LG+S+RLPK +D TCAICLSEY+ KET+RTIP C H FHA+C
Sbjct: 298 VIVMGLDGPTIESYPKIVLGESKRLPKVDDATCAICLSEYEPKETLRTIPQCQHCFHADC 357

Query: 124 VDEWLKLNATCPVCRTSPD 139
           +DEWLKLN TCPVCR SP+
Sbjct: 358 IDEWLKLNGTCPVCRNSPE 376

[Close]
BLAST of CSPI06G16920 vs. TAIR10
Match: AT5G07040.1 (AT5G07040.1 RING/U-box superfamily protein)

HSP 1 Score: 131.3 bits (329), Expect = 5.5e-31
Identity = 63/132 (47.73%), Postives = 85/132 (64.39%), Query Frame = 1 

Query: 9   GAKYGLIIGVGIPGLLFLIGLVFYICGKCKAFARPNRPTSNLSLSLGHEPTSTKAGLDGP 68
           G  YG+ I V I  L+  I L  YIC + K+  R +  TS++ L L       K GLD P
Sbjct: 12  GLGYGIAIAVSILVLISFIMLASYICIRSKSTGR-DEATSDVVLDLPSPAAEVKLGLDRP 71

Query: 69  TIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWLKLNA 128
            IES+P+  LG SRRLP+ N+  C+ICL +Y+++E +R IP+C H FH +CVDEWL+ +A
Sbjct: 72  VIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSA 131

Query: 129 TCPVCRTSPDDS 141
           TCP+CR SP  S
Sbjct: 132 TCPLCRNSPAPS 142

[Close]
BLAST of CSPI06G16920 vs. TAIR10
Match: AT2G25410.1 (AT2G25410.1 RING/U-box superfamily protein)

HSP 1 Score: 111.3 bits (277), Expect = 5.8e-25
Identity = 57/122 (46.72%), Postives = 81/122 (66.39%), Query Frame = 1 

Query: 20  IPGLLFLIGLVFYICGKCKAFARPNRPT-SNLSLSLGHEPTSTKA--GLDGPTIESFPKT 79
           +  L F +GLV  +C   +  ++  +   + LS S+  +P++  A  GLD  TIES+ K 
Sbjct: 253 LTALTFCVGLV--MCSSERVSSQIQQAVVARLSGSVTSQPSNEVARIGLDESTIESYKKV 312

Query: 80  TLGQSRRLPK-SNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWLKLNATCPVCRT 138
            LG+SRRLP  SND  C ICLSEY +KET+R +P+C H FH  C+D WLKL+++CPVCR+
Sbjct: 313 ELGESRRLPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHSSCPVCRS 372

[Close]
BLAST of CSPI06G16920 vs. TAIR10
Match: AT1G28040.1 (AT1G28040.1 RING/U-box superfamily protein)

HSP 1 Score: 107.5 bits (267), Expect = 8.4e-24
Identity = 45/73 (61.64%), Postives = 56/73 (76.71%), Query Frame = 1 

Query: 64  GLDGPTIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEW 123
           GLD  TIES+ K  LG+SRRLP +N   C ICLSEY SKET+R +P+C H FH  C+DEW
Sbjct: 225 GLDQSTIESYKKVELGESRRLPGTNGIICPICLSEYASKETVRCMPECDHCFHVQCIDEW 284

Query: 124 LKLNATCPVCRTS 137
           LK++++CPVCR S
Sbjct: 285 LKIHSSCPVCRNS 297

[Close]
BLAST of CSPI06G16920 vs. TAIR10
Match: AT2G46495.1 (AT2G46495.1 RING/U-box superfamily protein)

HSP 1 Score: 105.1 bits (261), Expect = 4.2e-23
Identity = 46/75 (61.33%), Postives = 57/75 (76.00%), Query Frame = 1 

Query: 64  GLDGPTIESFPKTTLGQSRRLPKSNDT-TCAICLSEYQSKETIRTIPDCGHFFHANCVDE 123
           GLD   IES+ KT LG+SRRLP +ND   C ICLSEY SKET+R IP+C H FH+ C+D 
Sbjct: 291 GLDESIIESYKKTELGESRRLPGNNDDIVCPICLSEYASKETVRCIPECDHCFHSECIDV 350

Query: 124 WLKLNATCPVCRTSP 138
           WLK++ +CP+CR SP
Sbjct: 351 WLKIHGSCPLCRNSP 365

[Close]
BLAST of CSPI06G16920 vs. NCBI nr
Match: gi|449464090|ref|XP_004149762.1| (PREDICTED: putative RING-H2 finger protein ATL21A [Cucumis sativus])

HSP 1 Score: 333.6 bits (854), Expect = 2.1e-88
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 1 

Query: 5   GIPRGAKYGLIIGVGIPGLLFLIGLVFYICGKCKAFARPNRPTSNLSLSLGHEPTSTKAG 64
           GIPRGAKYGLIIGVGIPGLLFLIGLVFYICGKCKAFARPNRPTSNLSLSLGHEPTSTKAG
Sbjct: 230 GIPRGAKYGLIIGVGIPGLLFLIGLVFYICGKCKAFARPNRPTSNLSLSLGHEPTSTKAG 289

Query: 65  LDGPTIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWL 124
           LDGPTIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWL
Sbjct: 290 LDGPTIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWL 349

Query: 125 KLNATCPVCRTSPDDSSATSTPSQSTSVSVSLPTSPRLLSRNDD 169
           KLNATCPVCRTSPDDSSATSTPSQSTSVSVSLPTSPR LSRNDD
Sbjct: 350 KLNATCPVCRTSPDDSSATSTPSQSTSVSVSLPTSPRSLSRNDD 393

[Close]
BLAST of CSPI06G16920 vs. NCBI nr
Match: gi|659102093|ref|XP_008451949.1| (PREDICTED: putative RING-H2 finger protein ATL21A [Cucumis melo])

HSP 1 Score: 307.8 bits (787), Expect = 1.2e-80
Identity = 151/161 (93.79%), Postives = 157/161 (97.52%), Query Frame = 1 

Query: 5   GIPRGAKYGLIIGVGIPGLLFLIGLVFYICGKCKAFARPNRPTSNLSLSLGHEPTSTKAG 64
           GIPRGAKYGLIIGVGIPG+LFLIGLV YICGKCKAFARPNRP+SNLSLSLGH+PTSTKAG
Sbjct: 230 GIPRGAKYGLIIGVGIPGVLFLIGLVCYICGKCKAFARPNRPSSNLSLSLGHDPTSTKAG 289

Query: 65  LDGPTIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWL 124
           LDGPTIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFH NCVDEWL
Sbjct: 290 LDGPTIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHVNCVDEWL 349

Query: 125 KLNATCPVCRTSPDDSSATSTPSQST-SVSVSLPTSPRLLS 165
           KLNATCPVCRTSP+DSSATSTPSQST S+SVSLPTSPR L+
Sbjct: 350 KLNATCPVCRTSPEDSSATSTPSQSTSSMSVSLPTSPRSLA 390

[Close]
BLAST of CSPI06G16920 vs. NCBI nr
Match: gi|595861377|ref|XP_007211321.1| (hypothetical protein PRUPE_ppa019102m2g, partial [Prunus persica])

HSP 1 Score: 201.4 bits (511), Expect = 1.2e-48
Identity = 92/153 (60.13%), Postives = 115/153 (75.16%), Query Frame = 1 

Query: 6   IPRGAKYGLIIGVGIPGLLFLIGLVFYICGKCKAFARPNRPTSNLSLSLGHEPTSTKAGL 65
           +PR AKYG+IIGV IPG L ++GL  Y+CG+  A+ R N+P  +LS S   +P     GL
Sbjct: 1   LPRSAKYGIIIGVVIPGFLCILGLASYVCGRINAYGRRNQPDMDLSTSASQQPAIVVVGL 60

Query: 66  DGPTIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWLK 125
           D PTIES+PKT LG+SRRLPK NDTTC+ICL EYQ KE +RTIP+C H+FHA+CVDEWLK
Sbjct: 61  DSPTIESYPKTLLGESRRLPKPNDTTCSICLGEYQPKEELRTIPECNHYFHASCVDEWLK 120

Query: 126 LNATCPVCRTSPDDSSATSTPSQSTSVSVSLPT 159
           +NATCPVCR SP+ S+  +  S  +S S SLP+
Sbjct: 121 MNATCPVCRKSPEGSALVTPSSSMSSSSTSLPS 153

[Close]
BLAST of CSPI06G16920 vs. NCBI nr
Match: gi|566148261|ref|XP_002297975.2| (hypothetical protein POPTR_0001s10610g [Populus trichocarpa])

HSP 1 Score: 199.5 bits (506), Expect = 4.6e-48
Identity = 95/153 (62.09%), Postives = 114/153 (74.51%), Query Frame = 1 

Query: 6   IPRGAKYGLIIGVGIPGLLFLIGLVFYICGKCKAFARPNRPTSNLSLSLGHEPTSTKAGL 65
           +PR AKYG+IIG GIPGLL +IG+V Y+ G+ KA +  N PT+ +S S+  +P     GL
Sbjct: 225 LPRSAKYGIIIGAGIPGLLCIIGIVSYVFGRLKARSSGNEPTTEMSTSVAPQPCVVVTGL 284

Query: 66  DGPTIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWLK 125
           DGPTIES+PKT LG S RLPK ND TC ICLSEYQ K+T+RTIP+C H+FHANCVDEWLK
Sbjct: 285 DGPTIESYPKTQLGDSGRLPKPNDNTCPICLSEYQPKDTLRTIPNCNHYFHANCVDEWLK 344

Query: 126 LNATCPVCRTSPDDSSATSTPSQSTSVSVSLPT 159
           +NATCP+CR SPD SS  +  S  TS   SL T
Sbjct: 345 MNATCPLCRNSPDGSSVMTHSSSLTSSYSSLST 377

[Close]
BLAST of CSPI06G16920 vs. NCBI nr
Match: gi|703064699|ref|XP_010087268.1| (RING-H2 finger protein ATL22 [Morus notabilis])

HSP 1 Score: 198.0 bits (502), Expect = 1.3e-47
Identity = 94/151 (62.25%), Postives = 114/151 (75.50%), Query Frame = 1 

Query: 5   GIPRGAKYGLIIGVGIPGLLFLIGLVFYICGKCKAFARPNRPTSNLSLSLGHEPTSTKAG 64
           G+ RGAKYG+ +GVGIPGL+ +IGL  YICG+ +A  R  RP S+ + +   EP     G
Sbjct: 264 GLSRGAKYGITVGVGIPGLICIIGLASYICGRIRACGRRRRPYSDNASADTPEPVVVLLG 323

Query: 65  LDGPTIESFPKTTLGQSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWL 124
            D PTIESFPK  LG+S+RLPK +D TC ICLSEYQ KET+RTIP+C H+FHANCVDEWL
Sbjct: 324 FDRPTIESFPKIELGESKRLPKPSDNTCPICLSEYQPKETLRTIPECNHYFHANCVDEWL 383

Query: 125 KLNATCPVCRTSPDDSSATSTPSQSTSVSVS 156
           K+NATCPVCR SPD +S+  +PS S SVS S
Sbjct: 384 KMNATCPVCRNSPDGTSSRVSPSTSVSVSSS 414

The following BLAST results are available for this feature:
BLAST of CSPI06G16920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL69_ARATH9.7e-3047.73Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana GN=ATL69 PE=3 SV=1[more]
ATL22_ARATH1.0e-2346.72RING-H2 finger protein ATL22 OS=Arabidopsis thaliana GN=ATL22 PE=2 SV=2[more]
ATL20_ARATH1.5e-2261.64RING-H2 finger protein ATL20 OS=Arabidopsis thaliana GN=ATL20 PE=2 SV=2[more]
AT21A_ARATH7.4e-2261.33Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana GN=ATL21A PE=3 SV... [more]
ATL70_ARATH6.3e-2137.12RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2 SV=1[more]
BLAST of CSPI06G16920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUW6_CUCSA1.4e-8899.39Uncharacterized protein OS=Cucumis sativus GN=Csa_4G051570 PE=4 SV=1[more]
M5X0E9_PRUPE8.5e-4960.13Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019102m2g PE=4 ... [more]
B9GL60_POPTR3.2e-4862.09Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s10610g PE=4 SV=2[more]
W9QMH5_9ROSA9.4e-4862.25RING-H2 finger protein ATL22 OS=Morus notabilis GN=L484_001528 PE=4 SV=1[more]
B9GXI1_POPTR1.4e-4657.79Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s13970g PE=4 SV=1[more]
BLAST of CSPI06G16920 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G53110.14.9e-4054.68 RING/U-box superfamily protein[more]
AT5G07040.15.5e-3147.73 RING/U-box superfamily protein[more]
AT2G25410.15.8e-2546.72 RING/U-box superfamily protein[more]
AT1G28040.18.4e-2461.64 RING/U-box superfamily protein[more]
AT2G46495.14.2e-2361.33 RING/U-box superfamily protein[more]
BLAST of CSPI06G16920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449464090|ref|XP_004149762.1|2.1e-8899.39PREDICTED: putative RING-H2 finger protein ATL21A [Cucumis sativus][more]
gi|659102093|ref|XP_008451949.1|1.2e-8093.79PREDICTED: putative RING-H2 finger protein ATL21A [Cucumis melo][more]
gi|595861377|ref|XP_007211321.1|1.2e-4860.13hypothetical protein PRUPE_ppa019102m2g, partial [Prunus persica][more]
gi|566148261|ref|XP_002297975.2|4.6e-4862.09hypothetical protein POPTR_0001s10610g [Populus trichocarpa][more]
gi|703064699|ref|XP_010087268.1|1.3e-4762.25RING-H2 finger protein ATL22 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G16920.1CSPI06G16920.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 91..134
score: 1.3
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 92..133
score: 6.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 92..134
score: 13
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 87..135
score: 1.6
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 9..159
score: 3.1
NoneNo IPR availablePANTHERPTHR14155:SF157RING-H2 FINGER PROTEIN ATL69-RELATEDcoord: 9..159
score: 3.1
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 86..137
score: 5.89

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G16920Cucumber (Gy14) v1cgycpiB478
CSPI06G16920Cucurbita maxima (Rimu)cmacpiB232
CSPI06G16920Cucumber (Chinese Long) v2cpicuB313
CSPI06G16920Melon (DHL92) v3.5.1cpimeB435
CSPI06G16920Watermelon (Charleston Gray)cpiwcgB504
CSPI06G16920Watermelon (97103) v1cpiwmB557
CSPI06G16920Bottle gourd (USVL1VR-Ls)cpilsiB405
CSPI06G16920Melon (DHL92) v3.6.1cpimedB434
CSPI06G16920Cucumber (Gy14) v2cgybcpiB287
CSPI06G16920Silver-seed gourdcarcpiB0082
CSPI06G16920Cucumber (Chinese Long) v3cpicucB365
CSPI06G16920Watermelon (97103) v2cpiwmbB496
CSPI06G16920Wax gourdcpiwgoB551