CSPI06G16720 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCGATAGGAATTTAAATAAGGGAAATCTAACCGGTCTTTACTGCTTGACCTTCATGTGAGAGAAAGAGAGTCTCCTGTTTCCATTTTTGAGCAAAGAGAGAAGAAGTGGTTTATAATGGAATTCAATACGCCCTTCCTCTCGGGCGTAGAATTTGGAATTTCATTTCTTTCTATACCTGACCCTCCCCCCACTTCTTTTTTTTTCATTTTTCTACTAATTTCTTTCTTGATGTCGACTGCCTTTCTCTGGAACTTTGTGAGAGAGAGAAAAAGACCCATTTCTCTCTCTCTCTAGTTTATACCTGTCCTATCATCCACATCAATTTATAAATGTCTCAGGGTTCAACTTTCTTTCTTAAACTCCCTATACTTTTCTCCCTTCCTCTCTTCCTCCCTTCATATTAGCCAAGCAGTAGAAACAACTATGGAGGATTTGGGCTGTTTATGGAGATTTCAGGAGGTGGGTCTCTCTTATTCTCTCGCTCTTCATGTCCCAAGAGTTAGTTCAGTTCATTTCTTCTTCTGGGTCTTCTCAATTTTGGGTGTTTTCAACTAGGAGGGCTTTTCCTTACAATGATTGTTTGTTTGATCTTCCCATGATCTTCCTCATTCTCTGTTTTCTTTAAGAATTCCAATTTTTGAATGGAAAATGATCGATTAAGTTCACTGAAGTTGGGTGTTGTAATGATTATCTTATATCACAATGCATACACCAAGCTAGATCTTTTGGTTTTCTTTATTCTTTGGTGGGGGAAATGAACTACAAATGTTCTATTTGTCTTGTTTTAAGTAGCAGAAGCAAGGGATTGGGAGTAACAAACAGTGTTTGTGCTTTACACGACGTGTGTGCTGACTTTTTTTTATCTGAGCATGTTTGGTTGCAAATGGAAAAGAATATGTCGGTTTTGATCAGAATTATGCTATATGTTATTCCAAAGACATTGATTAATAGTACCTAATTTACGGCATTATTTGACAATGGACTTTGGATTTCCAAGTGTCTTCTTGGCATTCTATAACCTCATCCTGATGCTCCAATAGTTTATCATTATCTTCCCACTTTCTCTCTCTCTTGAAGAAAGTAAACGCAGAAGAGGATTTTCTATATCTTTAAAGCAAATATTTTGTTCTGCTTACGCTAACAAAACTAATTTTCAATTTGCAGAACGTGGAGGATTTGAAGCAGAAACTCCTACAGACGACTTTTGAACTCGAGTCTCTAAAAATGGAAGCAAATGAAGAAAGTGTTAAGAACAAAGAGAAAGTGAAGAGCTTACTTCTTCTACTGCAGGCAGCATATGAAGAAAGAGATGAAGCAAGAGATCAACTGCAGAAACTGATGAACAAAATTATGCCAACTACTGCAACTGAATTACCCACTCTGCGTCATTTCCAACCTGAAAGCCCTCTCAACATACCTACAAAAGCAAATTCAAGCATCACAGAATCAAATAGTCTCTATGAAACTTATAATCATCATTCATATGGTTCTTCACCAGCAGATTCGTTCTTTGATGGTGTTTCATCACCAGATTTCTCCACTGCAAACATGGCCGATTCAAGCAAAATAAGTTTTGTAAATCAGCCCTTTGTCCCAGAGTATAACAATGCCCCTCAACCTCCTCTGGCAACAGGACTTGACACTCCAAAAACAGAAAAGCCTGATCCATTCTCTGCAGTGATTGATAATCTTGCTAAGGGAAGAGCATTACCTCAGAAAGGGAAGCTCCTGCAAGCTGTTACAGAAGCCGGTCCTTTGCTTCAGACACTTCTCGTTGCTGGGCCTCTTCCACAATGGCGTAATCCTCCGCCATTGCAAGCTTTCAAGATTCCCCCTCTTCTAGTGAATGGCTGCAACACTAAAAATATCGATCAAAACCCTTCTTCAAAAGCCAGCAGCTCTTCCCAAAAGCCACTCCATTCTCTTTTACACGCTGAAATGTTATCCCGTGGGTCTTCTCAAATTTGTTCAGCTTCCTCTATGTTGAGTTTCACAAATGGTCCTTCTGGTTCTTGCTTCAACAGCGCCTTGATGATGGCTCCAAATGTTAACCACCCGCAGATTCTAGGAGCCAAGAGACAGAAAATTCAGTGACCGCCATTGTACAAATTCAAGATTGATCTGGAGTTGGCAGTGTAAAAAATGACTTGATAGTAGTTTTATTGAGGAGATTTGAAGTTTTAATTACATCAAAAATTAACTTCATCGGCCCCATCATGCTAACCAATCTCAACTTCAATTTCTTTTCCTCAGCAGAAAAAAAATGACAAGAAACAGTGAC ATGGAGGATTTGGGCTGTTTATGGAGATTTCAGGAGAACGTGGAGGATTTGAAGCAGAAACTCCTACAGACGACTTTTGAACTCGAGTCTCTAAAAATGGAAGCAAATGAAGAAAGTGTTAAGAACAAAGAGAAAGTGAAGAGCTTACTTCTTCTACTGCAGGCAGCATATGAAGAAAGAGATGAAGCAAGAGATCAACTGCAGAAACTGATGAACAAAATTATGCCAACTACTGCAACTGAATTACCCACTCTGCGTCATTTCCAACCTGAAAGCCCTCTCAACATACCTACAAAAGCAAATTCAAGCATCACAGAATCAAATAGTCTCTATGAAACTTATAATCATCATTCATATGGTTCTTCACCAGCAGATTCGTTCTTTGATGGTGTTTCATCACCAGATTTCTCCACTGCAAACATGGCCGATTCAAGCAAAATAAGTTTTGTAAATCAGCCCTTTGTCCCAGAGTATAACAATGCCCCTCAACCTCCTCTGGCAACAGGACTTGACACTCCAAAAACAGAAAAGCCTGATCCATTCTCTGCAGTGATTGATAATCTTGCTAAGGGAAGAGCATTACCTCAGAAAGGGAAGCTCCTGCAAGCTGTTACAGAAGCCGGTCCTTTGCTTCAGACACTTCTCGTTGCTGGGCCTCTTCCACAATGGCGTAATCCTCCGCCATTGCAAGCTTTCAAGATTCCCCCTCTTCTAGTGAATGGCTGCAACACTAAAAATATCGATCAAAACCCTTCTTCAAAAGCCAGCAGCTCTTCCCAAAAGCCACTCCATTCTCTTTTACACGCTGAAATGTTATCCCGTGGGTCTTCTCAAATTTGTTCAGCTTCCTCTATGTTGAGTTTCACAAATGGTCCTTCTGGTTCTTGCTTCAACAGCGCCTTGATGATGGCTCCAAATGTTAACCACCCGCAGATTCTAGGAGCCAAGAGACAGAAAATTCAGTGA ATGGAGGATTTGGGCTGTTTATGGAGATTTCAGGAGAACGTGGAGGATTTGAAGCAGAAACTCCTACAGACGACTTTTGAACTCGAGTCTCTAAAAATGGAAGCAAATGAAGAAAGTGTTAAGAACAAAGAGAAAGTGAAGAGCTTACTTCTTCTACTGCAGGCAGCATATGAAGAAAGAGATGAAGCAAGAGATCAACTGCAGAAACTGATGAACAAAATTATGCCAACTACTGCAACTGAATTACCCACTCTGCGTCATTTCCAACCTGAAAGCCCTCTCAACATACCTACAAAAGCAAATTCAAGCATCACAGAATCAAATAGTCTCTATGAAACTTATAATCATCATTCATATGGTTCTTCACCAGCAGATTCGTTCTTTGATGGTGTTTCATCACCAGATTTCTCCACTGCAAACATGGCCGATTCAAGCAAAATAAGTTTTGTAAATCAGCCCTTTGTCCCAGAGTATAACAATGCCCCTCAACCTCCTCTGGCAACAGGACTTGACACTCCAAAAACAGAAAAGCCTGATCCATTCTCTGCAGTGATTGATAATCTTGCTAAGGGAAGAGCATTACCTCAGAAAGGGAAGCTCCTGCAAGCTGTTACAGAAGCCGGTCCTTTGCTTCAGACACTTCTCGTTGCTGGGCCTCTTCCACAATGGCGTAATCCTCCGCCATTGCAAGCTTTCAAGATTCCCCCTCTTCTAGTGAATGGCTGCAACACTAAAAATATCGATCAAAACCCTTCTTCAAAAGCCAGCAGCTCTTCCCAAAAGCCACTCCATTCTCTTTTACACGCTGAAATGTTATCCCGTGGGTCTTCTCAAATTTGTTCAGCTTCCTCTATGTTGAGTTTCACAAATGGTCCTTCTGGTTCTTGCTTCAACAGCGCCTTGATGATGGCTCCAAATGTTAACCACCCGCAGATTCTAGGAGCCAAGAGACAGAAAATTCAGTGA
BLAST of CSPI06G16720 vs. TrEMBL
Match: A0A0A0KHV7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G303220 PE=4 SV=1) HSP 1 Score: 621.3 bits (1601), Expect = 6.5e-175 Identity = 320/321 (99.69%), Postives = 320/321 (99.69%), Query Frame = 1
BLAST of CSPI06G16720 vs. TrEMBL
Match: A5ARE7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003142 PE=4 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 1.0e-90 Identity = 195/321 (60.75%), Postives = 238/321 (74.14%), Query Frame = 1
BLAST of CSPI06G16720 vs. TrEMBL
Match: F6GTU2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g04110 PE=4 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 1.0e-90 Identity = 195/321 (60.75%), Postives = 238/321 (74.14%), Query Frame = 1
BLAST of CSPI06G16720 vs. TrEMBL
Match: B9SYP8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0788280 PE=4 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 4.3e-86 Identity = 188/322 (58.39%), Postives = 239/322 (74.22%), Query Frame = 1
BLAST of CSPI06G16720 vs. TrEMBL
Match: A0A061H046_THECC (TOX high mobility group box family member 4-A, putative isoform 1 OS=Theobroma cacao GN=TCM_041910 PE=4 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 5.7e-86 Identity = 191/323 (59.13%), Postives = 237/323 (73.37%), Query Frame = 1
BLAST of CSPI06G16720 vs. TAIR10
Match: AT2G28690.1 (AT2G28690.1 Protein of unknown function (DUF1635)) HSP 1 Score: 179.1 bits (453), Expect = 4.3e-45 Identity = 112/238 (47.06%), Postives = 150/238 (63.03%), Query Frame = 1
BLAST of CSPI06G16720 vs. TAIR10
Match: AT5G59760.1 (AT5G59760.1 Protein of unknown function (DUF1635)) HSP 1 Score: 109.8 bits (273), Expect = 3.2e-24 Identity = 88/255 (34.51%), Postives = 123/255 (48.24%), Query Frame = 1
BLAST of CSPI06G16720 vs. TAIR10
Match: AT5G22930.1 (AT5G22930.1 Protein of unknown function (DUF1635)) HSP 1 Score: 83.2 bits (204), Expect = 3.2e-16 Identity = 80/242 (33.06%), Postives = 113/242 (46.69%), Query Frame = 1
BLAST of CSPI06G16720 vs. TAIR10
Match: AT3G44940.1 (AT3G44940.1 Protein of unknown function (DUF1635)) HSP 1 Score: 77.0 bits (188), Expect = 2.3e-14 Identity = 39/71 (54.93%), Postives = 50/71 (70.42%), Query Frame = 1
BLAST of CSPI06G16720 vs. TAIR10
Match: AT2G28140.1 (AT2G28140.1 Protein of unknown function (DUF1635)) HSP 1 Score: 72.8 bits (177), Expect = 4.4e-13 Identity = 33/47 (70.21%), Postives = 44/47 (93.62%), Query Frame = 1
BLAST of CSPI06G16720 vs. NCBI nr
Match: gi|778714527|ref|XP_011657251.1| (PREDICTED: uncharacterized protein LOC101217302 [Cucumis sativus]) HSP 1 Score: 621.3 bits (1601), Expect = 9.4e-175 Identity = 320/321 (99.69%), Postives = 320/321 (99.69%), Query Frame = 1
BLAST of CSPI06G16720 vs. NCBI nr
Match: gi|659095048|ref|XP_008448366.1| (PREDICTED: putative protein TPRXL [Cucumis melo]) HSP 1 Score: 588.2 bits (1515), Expect = 8.8e-165 Identity = 306/321 (95.33%), Postives = 309/321 (96.26%), Query Frame = 1
BLAST of CSPI06G16720 vs. NCBI nr
Match: gi|731392333|ref|XP_002284421.2| (PREDICTED: uncharacterized protein LOC100244942 isoform X1 [Vitis vinifera]) HSP 1 Score: 341.7 bits (875), Expect = 1.4e-90 Identity = 195/321 (60.75%), Postives = 238/321 (74.14%), Query Frame = 1
BLAST of CSPI06G16720 vs. NCBI nr
Match: gi|1009173049|ref|XP_015867606.1| (PREDICTED: uncharacterized protein LOC107405107 [Ziziphus jujuba]) HSP 1 Score: 334.3 bits (856), Expect = 2.3e-88 Identity = 194/324 (59.88%), Postives = 235/324 (72.53%), Query Frame = 1
BLAST of CSPI06G16720 vs. NCBI nr
Match: gi|255580586|ref|XP_002531117.1| (PREDICTED: uncharacterized protein LOC8286115 [Ricinus communis]) HSP 1 Score: 326.2 bits (835), Expect = 6.2e-86 Identity = 188/322 (58.39%), Postives = 239/322 (74.22%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |