CSPI06G15730 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGTACTATCAAGAAGCTCCAGCATCTCATGCTTCTGAGATTCGCTCTAACATGCATGGAGTTCGAATGAGAGGAAAGCGGGTCAAGAGCATTCCGTCTCGTCGTCCTTATTCACGGATGGCAGATAGAGGTAAGGTATCCTATACTATGAGTTCCAGTAGTTCTGAGTCAGTACAGGATGTACCTACTACAATGGCTGCCAGTGCATCGTCTGATTTGCAAGATCAGATTCCGCTCACTGAGTTATTACGGAAAAAGACTCAATCACGGTCGTCAGTGCCGGAAGGGGTTTCCAAAAGTCCAAAACTAAATGTGTCAAAAGAAAAAGGGAAAGCCCCTATGTCTGACTCTTCGACGGATGCTTCCAGTTCGACTTCGGTACCAATGTCAAATCGTCAGTCTTTTGGTTCGTCTTCATCACATAAGTTGTCTGATGCACCCACTCAAGTTCCTCCTTCTCCGGCACCTGCACAACCCTATTCTTCTTCACAGCCTGCCGCTGCACAACCAGCTCCTCCATCTTCCGCCACTAAGGAAGCAGACAAGACTTCCTCTCCTCCTCCTCAAACCAAGGTACCTGAACCTAGAGGGGTCACAATCAAGACTGGACGAAGATGCCTTCCCCGAAATATTCCATCTGTTCCTATTGATGGGATCTCATTCCATCATGAGGAGAATGCTCAGTGCTGGAGGTTCGTAGTGCAAACGCGTTTGGCTGATGAGGTGAATATATCATACAAACATCAGTCTTGTGTAGCAATAATGGAACTAATTAATCAGGCTGGACTTTCGCGCACGATTCTCAATGTTGGACCATTCTATCCCAAGCTCATTAGAGAGGTCATTGCTAATCTATCGTCTGATTTTGATGATCCAAGCAGTCCAGATTATCAAACAATTCATGTCAGAGGACGAACACTTGTCATCTCTCCCTATGTGATTAATACTTTCTTAGGGCTTACTCCGTCGGAGAATGCTGATTTACCAACCCACTCAACAGATACCCTAGCATCTGTGTTGACAGGAGGGTCTCTTATAGTTTGGCCACTCACTGGCATTCCTTCTGCTGCACTCAGTGTCAAGTATGCCATTTTGCACAAAATTGGCATCGTAAACTGGTTCCCATCATCACATGCCTCTAGTGTTTCTGTAGCTCTGGCTGCATTTCTCTTCTAA ATGCATGGAGTTCGAATGAGAGGAAAGCGGGTCAAGAGCATTCCGTCTCGTCGTCCTTATTCACGGATGGCAGATAGAGGTAAGGTATCCTATACTATGAGTTCCAGTAGTTCTGAGTCAGTACAGGATGTACCTACTACAATGGCTGCCAGTGCATCGTCTGATTTGCAAGATCAGATTCCGCTCACTGAGTTATTACGGAAAAAGACTCAATCACGGTCGTCAGTGCCGGAAGGGGTTTCCAAAAGTCCAAAACTAAATGTGTCAAAAGAAAAAGGGAAAGCCCCTATGTCTGACTCTTCGACGGATGCTTCCAGTTCGACTTCGGTACCAATGTCAAATCGTCAGTCTTTTGGTTCGTCTTCATCACATAAGTTGTCTGATGCACCCACTCAAGTTCCTCCTTCTCCGGCACCTGCACAACCCTATTCTTCTTCACAGCCTGCCGCTGCACAACCAGCTCCTCCATCTTCCGCCACTAAGGAAGCAGACAAGACTTCCTCTCCTCCTCCTCAAACCAAGGTACCTGAACCTAGAGGGGTCACAATCAAGACTGGACGAAGATGCCTTCCCCGAAATATTCCATCTGTTCCTATTGATGGGATCTCATTCCATCATGAGGAGAATGCTCAGTGCTGGAGGTTCGTAGTGCAAACGCGTTTGGCTGATGAGGTGAATATATCATACAAACATCAGTCTTGTGTAGCAATAATGGAACTAATTAATCAGGCTGGACTTTCGCGCACGATTCTCAATGTTGGACCATTCTATCCCAAGCTCATTAGAGAGGTCATTGCTAATCTATCGTCTGATTTTGATGATCCAAGCAGTCCAGATTATCAAACAATTCATGTCAGAGGACGAACACTTGTCATCTCTCCCTATGTGATTAATACTTTCTTAGGGCTTACTCCGTCGGAGAATGCTGATTTACCAACCCACTCAACAGATACCCTAGCATCTGTGTTGACAGGAGGGTCTCTTATAGTTTGGCCACTCACTGGCATTCCTTCTGCTGCACTCAGTGTCAAGTATGCCATTTTGCACAAAATTGGCATCGTAAACTGGTTCCCATCATCACATGCCTCTAGTGTTTCTGTAGCTCTGGCTGCATTTCTCTTCTAA ATGCATGGAGTTCGAATGAGAGGAAAGCGGGTCAAGAGCATTCCGTCTCGTCGTCCTTATTCACGGATGGCAGATAGAGGTAAGGTATCCTATACTATGAGTTCCAGTAGTTCTGAGTCAGTACAGGATGTACCTACTACAATGGCTGCCAGTGCATCGTCTGATTTGCAAGATCAGATTCCGCTCACTGAGTTATTACGGAAAAAGACTCAATCACGGTCGTCAGTGCCGGAAGGGGTTTCCAAAAGTCCAAAACTAAATGTGTCAAAAGAAAAAGGGAAAGCCCCTATGTCTGACTCTTCGACGGATGCTTCCAGTTCGACTTCGGTACCAATGTCAAATCGTCAGTCTTTTGGTTCGTCTTCATCACATAAGTTGTCTGATGCACCCACTCAAGTTCCTCCTTCTCCGGCACCTGCACAACCCTATTCTTCTTCACAGCCTGCCGCTGCACAACCAGCTCCTCCATCTTCCGCCACTAAGGAAGCAGACAAGACTTCCTCTCCTCCTCCTCAAACCAAGGTACCTGAACCTAGAGGGGTCACAATCAAGACTGGACGAAGATGCCTTCCCCGAAATATTCCATCTGTTCCTATTGATGGGATCTCATTCCATCATGAGGAGAATGCTCAGTGCTGGAGGTTCGTAGTGCAAACGCGTTTGGCTGATGAGGTGAATATATCATACAAACATCAGTCTTGTGTAGCAATAATGGAACTAATTAATCAGGCTGGACTTTCGCGCACGATTCTCAATGTTGGACCATTCTATCCCAAGCTCATTAGAGAGGTCATTGCTAATCTATCGTCTGATTTTGATGATCCAAGCAGTCCAGATTATCAAACAATTCATGTCAGAGGACGAACACTTGTCATCTCTCCCTATGTGATTAATACTTTCTTAGGGCTTACTCCGTCGGAGAATGCTGATTTACCAACCCACTCAACAGATACCCTAGCATCTGTGTTGACAGGAGGGTCTCTTATAGTTTGGCCACTCACTGGCATTCCTTCTGCTGCACTCAGTGTCAAGTATGCCATTTTGCACAAAATTGGCATCGTAAACTGGTTCCCATCATCACATGCCTCTAGTGTTTCTGTAGCTCTGGCTGCATTTCTCTTCTAA
BLAST of CSPI06G15730 vs. TrEMBL
Match: A0A0A0L3U9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G507410 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 2.1e-31 Identity = 98/262 (37.40%), Postives = 137/262 (52.29%), Query Frame = 1
BLAST of CSPI06G15730 vs. TrEMBL
Match: A0A072UV21_MEDTR (Envelope-like protein, putative OS=Medicago truncatula GN=MTR_3g451050 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 6.1e-31 Identity = 73/191 (38.22%), Postives = 113/191 (59.16%), Query Frame = 1
BLAST of CSPI06G15730 vs. TrEMBL
Match: A0A0A0LIG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G231965 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 6.7e-30 Identity = 93/209 (44.50%), Postives = 120/209 (57.42%), Query Frame = 1
BLAST of CSPI06G15730 vs. TrEMBL
Match: A0A072USV5_MEDTR (Envelope-like protein, putative OS=Medicago truncatula GN=MTR_3g009370 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.4e-27 Identity = 72/195 (36.92%), Postives = 111/195 (56.92%), Query Frame = 1
BLAST of CSPI06G15730 vs. TrEMBL
Match: Q84VH5_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 2.9e-25 Identity = 116/392 (29.59%), Postives = 183/392 (46.68%), Query Frame = 1
BLAST of CSPI06G15730 vs. NCBI nr
Match: gi|778730782|ref|XP_011659856.1| (PREDICTED: cell wall protein RBR3-like [Cucumis sativus]) HSP 1 Score: 703.7 bits (1815), Expect = 1.7e-199 Identity = 373/374 (99.73%), Postives = 374/374 (100.00%), Query Frame = 1
BLAST of CSPI06G15730 vs. NCBI nr
Match: gi|659130162|ref|XP_008465030.1| (PREDICTED: uncharacterized protein LOC103502746 [Cucumis melo]) HSP 1 Score: 265.8 bits (678), Expect = 1.2e-67 Identity = 178/407 (43.73%), Postives = 235/407 (57.74%), Query Frame = 1
BLAST of CSPI06G15730 vs. NCBI nr
Match: gi|659109747|ref|XP_008454855.1| (PREDICTED: uncharacterized protein LOC103495162 [Cucumis melo]) HSP 1 Score: 256.5 bits (654), Expect = 7.1e-65 Identity = 175/392 (44.64%), Postives = 223/392 (56.89%), Query Frame = 1
BLAST of CSPI06G15730 vs. NCBI nr
Match: gi|659129246|ref|XP_008464590.1| (PREDICTED: uncharacterized protein LOC103502436 [Cucumis melo]) HSP 1 Score: 253.4 bits (646), Expect = 6.0e-64 Identity = 143/242 (59.09%), Postives = 169/242 (69.83%), Query Frame = 1
BLAST of CSPI06G15730 vs. NCBI nr
Match: gi|659126982|ref|XP_008463460.1| (PREDICTED: uncharacterized protein LOC103501627 [Cucumis melo]) HSP 1 Score: 250.8 bits (639), Expect = 3.9e-63 Identity = 165/375 (44.00%), Postives = 214/375 (57.07%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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