CSPI06G15270 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G15270
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 13432512 .. 13432724 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCAAGAAAGAGAGGTCGGCTGGGAGCAGGGAGGCGTCAATTGGGGTGAAGAACGCGACTCACACGTTTTGGTGAAGAGGGATGCGTGCGGCTTAGAGAGGGCCTCGACTGCAACGGGTGTGCGGTGGACGATGGGGCTTCGTCCAAGCTCGACGGAGAGGCGTGGCCAGCGAACGACAGTTAGCAGTAGTGGCACCCTTCAACGGTGA

mRNA sequence

ATGGCTCAAGAAAGAGAGGTCGGCTGGGAGCAGGGAGGCGTCAATTGGGGTGAAGAACGCGACTCACACGTTTTGGTGAAGAGGGATGCGTGCGGCTTAGAGAGGGCCTCGACTGCAACGGGTGTGCGGTGGACGATGGGGCTTCGTCCAAGCTCGACGGAGAGGCGTGGCCAGCGAACGACAGTTAGCAGTAGTGGCACCCTTCAACGGTGA

Coding sequence (CDS)

ATGGCTCAAGAAAGAGAGGTCGGCTGGGAGCAGGGAGGCGTCAATTGGGGTGAAGAACGCGACTCACACGTTTTGGTGAAGAGGGATGCGTGCGGCTTAGAGAGGGCCTCGACTGCAACGGGTGTGCGGTGGACGATGGGGCTTCGTCCAAGCTCGACGGAGAGGCGTGGCCAGCGAACGACAGTTAGCAGTAGTGGCACCCTTCAACGGTGA
Homology
[Close]
BLAST of CSPI06G15270 vs. TrEMBL
Match: A0A0A0KCF9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G223480 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 4.1e-13
Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 1 

Query: 1  MAQEREVGWEQGGVNWGEERDSHVLVKRDACGLERASTA 40
          MAQEREVGWEQG VNWGEERDSHVLVKRDACGLERASTA
Sbjct: 1  MAQEREVGWEQGVVNWGEERDSHVLVKRDACGLERASTA 39

[Close]
BLAST of CSPI06G15270 vs. NCBI nr
Match: gi|700192029|gb|KGN47233.1| (hypothetical protein Csa_6G223480 [Cucumis sativus])

HSP 1 Score: 81.6 bits (200), Expect = 5.9e-13
Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 1 

Query: 1  MAQEREVGWEQGGVNWGEERDSHVLVKRDACGLERASTA 40
          MAQEREVGWEQG VNWGEERDSHVLVKRDACGLERASTA
Sbjct: 1  MAQEREVGWEQGVVNWGEERDSHVLVKRDACGLERASTA 39

The following BLAST results are available for this feature:
BLAST of CSPI06G15270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI06G15270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCF9_CUCSA4.1e-1397.44Uncharacterized protein OS=Cucumis sativus GN=Csa_6G223480 PE=4 SV=1[more]
BLAST of CSPI06G15270 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI06G15270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192029|gb|KGN47233.1|5.9e-1397.44hypothetical protein Csa_6G223480 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G15270.1CSPI06G15270.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G15270Csa6G223480Cucumber (Chinese Long) v2cpicuB314
CSPI06G15270CsGy6G015110Cucumber (Gy14) v2cgybcpiB293
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G15270Cucumber (Chinese Long) v3cpicucB370