CSPI06G13820 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G13820
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Pyridoxal 5'-phosphate synthase subunit PdxS
Location	Chr6 : 12239947 .. 12241377 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTTACTTAAATGAACCGTAAGCTTCTTCTACGTCCATCACCGCCCATTGACACATATCCCTTTCTCTAAACCAATATTCAATTTGACCTCTCTTTCTCTCTTTCTCTCTCTCTTTCTTCTACTTCTTCCCTCTAATGGCCGACACCGGCGTAGTCACCGTCTACGGCAATGGCGTCATATGTGAAGCTACCAAGAAATCTCCCTTCTCCGTCAAGGCCGGTTTAGCCCAAATGCTTCGTGGCGGTGTCATTATGGATGTCGTTAATGCCCAGCAGGCTCGAATCGCCGAAGAGGCCGGCGCCTGCGCCGTCATGGCCCTACAGAGAGTTCCCGCGGACATTAGGGCACAAGGTGGAGTCGCTCGCATGAGCGATCCCCAATTAATTAAAGAAATCAAGCAAGCTGTGACCATCCCTGTCATGGCTAATGTTCGAATTGGTCATTTTGTCGAGGCACAAATTCTAGAGGCAATCGACATCGATTACATCGACGAGAGCGAGGTTCTGACTCCAGCCGATGATAAGAATCACATCAACAAGCACAATTTCAGGATCCCTTTCGTATGCGGATGCCGGAATTTAGGGGAAGCATTACGTCGAATTCGTGAAGGCGCTGCGATGATTCGTACTAAAGGCGAAGCCGGAACTGGAGATATTGTTGAGGCCGTTCGTCATGTGAGGTCTGTGATGGGAGATATTAGAATGCTGAGGAATATGGACGATGATGAAGTTTTCTGTTACGCGAAGCAAATCGGAGCACCGTATGATTTGGTTATGCAAACCAAGCAGCTTGGCAGGCTACCGGTGGTGCATTTCGCAGCTGGAGGAATTGCAACTCCGGCTGATGCGGCGATGATGATGCAATTGGGATGCGACGGAGTGTTCGTCGGCTCCGGCGTGTTCAAGAGCAGCGATCCAGCAAGACGAGCTAGGGCTATTGTACAAGCCGCAACGCATTACAGTGATCCTGATGTTCTTGCAGAGGTGAGCTTTGGATTGGGAGAGCCCATGGCGGGGATTAACCTCAGCGATCAGAATGTGAATGTGGAGAGGTATGCAAATCGGTCGGAGTAATTTGGGTTTCTGCATTTTTGGTTTGTGAATCAGATCAAAGGCTTCAATGATCGGATCACGGGTAGAGGTGATGTTCTTGAAATCTCCTTTTGTATGATTCATTTGAGTTTTAACTTTGTTTTGATGTTTCGTTTTTTGAGGCGATACCAATAAACTTATCCGTAATCTGGGTTTTTGTGTGAAAGTTTAGTTGTCTTTGGTGTTTTTAGGATTGAATTTTAGAATGAATGGTTTTGTTGAACCATGAATGATTATGGATCAGAAAAATTAAAAGAAAAAAAAGAACTACACAAAATTTGTAAATTATGGGTGTAATATATGTTTGATGTATGAAAAGTTTTCACCTTTAGTCAT

mRNA sequence

ATGGCCGACACCGGCGTAGTCACCGTCTACGGCAATGGCGTCATATGTGAAGCTACCAAGAAATCTCCCTTCTCCGTCAAGGCCGGTTTAGCCCAAATGCTTCGTGGCGGTGTCATTATGGATGTCGTTAATGCCCAGCAGGCTCGAATCGCCGAAGAGGCCGGCGCCTGCGCCGTCATGGCCCTACAGAGAGTTCCCGCGGACATTAGGGCACAAGGTGGAGTCGCTCGCATGAGCGATCCCCAATTAATTAAAGAAATCAAGCAAGCTGTGACCATCCCTGTCATGGCTAATGTTCGAATTGGTCATTTTGTCGAGGCACAAATTCTAGAGGCAATCGACATCGATTACATCGACGAGAGCGAGGTTCTGACTCCAGCCGATGATAAGAATCACATCAACAAGCACAATTTCAGGATCCCTTTCGTATGCGGATGCCGGAATTTAGGGGAAGCATTACGTCGAATTCGTGAAGGCGCTGCGATGATTCGTACTAAAGGCGAAGCCGGAACTGGAGATATTGTTGAGGCCGTTCGTCATGTGAGGTCTGTGATGGGAGATATTAGAATGCTGAGGAATATGGACGATGATGAAGTTTTCTGTTACGCGAAGCAAATCGGAGCACCGTATGATTTGGTTATGCAAACCAAGCAGCTTGGCAGGCTACCGGTGGTGCATTTCGCAGCTGGAGGAATTGCAACTCCGGCTGATGCGGCGATGATGATGCAATTGGGATGCGACGGAGTGTTCGTCGGCTCCGGCGTGTTCAAGAGCAGCGATCCAGCAAGACGAGCTAGGGCTATTGTACAAGCCGCAACGCATTACAGTGATCCTGATGTTCTTGCAGAGGTGAGCTTTGGATTGGGAGAGCCCATGGCGGGGATTAACCTCAGCGATCAGAATGTGAATGTGGAGAGGTATGCAAATCGGTCGGAGTAA

Coding sequence (CDS)

ATGGCCGACACCGGCGTAGTCACCGTCTACGGCAATGGCGTCATATGTGAAGCTACCAAGAAATCTCCCTTCTCCGTCAAGGCCGGTTTAGCCCAAATGCTTCGTGGCGGTGTCATTATGGATGTCGTTAATGCCCAGCAGGCTCGAATCGCCGAAGAGGCCGGCGCCTGCGCCGTCATGGCCCTACAGAGAGTTCCCGCGGACATTAGGGCACAAGGTGGAGTCGCTCGCATGAGCGATCCCCAATTAATTAAAGAAATCAAGCAAGCTGTGACCATCCCTGTCATGGCTAATGTTCGAATTGGTCATTTTGTCGAGGCACAAATTCTAGAGGCAATCGACATCGATTACATCGACGAGAGCGAGGTTCTGACTCCAGCCGATGATAAGAATCACATCAACAAGCACAATTTCAGGATCCCTTTCGTATGCGGATGCCGGAATTTAGGGGAAGCATTACGTCGAATTCGTGAAGGCGCTGCGATGATTCGTACTAAAGGCGAAGCCGGAACTGGAGATATTGTTGAGGCCGTTCGTCATGTGAGGTCTGTGATGGGAGATATTAGAATGCTGAGGAATATGGACGATGATGAAGTTTTCTGTTACGCGAAGCAAATCGGAGCACCGTATGATTTGGTTATGCAAACCAAGCAGCTTGGCAGGCTACCGGTGGTGCATTTCGCAGCTGGAGGAATTGCAACTCCGGCTGATGCGGCGATGATGATGCAATTGGGATGCGACGGAGTGTTCGTCGGCTCCGGCGTGTTCAAGAGCAGCGATCCAGCAAGACGAGCTAGGGCTATTGTACAAGCCGCAACGCATTACAGTGATCCTGATGTTCTTGCAGAGGTGAGCTTTGGATTGGGAGAGCCCATGGCGGGGATTAACCTCAGCGATCAGAATGTGAATGTGGAGAGGTATGCAAATCGGTCGGAGTAA

Homology

[Close]

BLAST of CSPI06G13820 vs. Swiss-Prot
Match: PDX1_HEVBR (Probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Hevea brasiliensis GN=PDX1 PE=2 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 5.4e-151
Identity = 273/312 (87.50%), Postives = 291/312 (93.27%), Query Frame = 1


Query: 1   MADTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
           MA TGVV VYGNG I E TKKSPFSVK GLAQMLRGGVIMDVVN +QARIAEEAGACAVM
Sbjct: 1   MAGTGVVAVYGNGAITE-TKKSPFSVKVGLAQMLRGGVIMDVVNPEQARIAEEAGACAVM 60

Query: 61  ALQRVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDE 120
           AL+RVPADIRAQGGVARMSDPQLIKEIKQ+VTIPVMA  RIGHFVEAQILEAI IDY+DE
Sbjct: 61  ALERVPADIRAQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDE 120

Query: 121 SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGDIVEAVRH 180
           SEVLTPAD++NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG+++EAVRH
Sbjct: 121 SEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVIEAVRH 180

Query: 181 VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM 240
           VRSVMGDIR+LRNMDDDEVF +AK+I APYDLVMQTKQLGRLPVV FAAGG+ATPADAA+
Sbjct: 181 VRSVMGDIRLLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAAL 240

Query: 241 MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQ 300
           MMQLGCDGVFVGSGVFKS DPARRARAIVQA THYSDPD+LAEVS GLGE M GINL+D+
Sbjct: 241 MMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDMLAEVSCGLGEAMVGINLNDK 300

Query: 301 NVNVERYANRSE 313
              VER+ANRSE
Sbjct: 301 --KVERFANRSE 309

[Close]

BLAST of CSPI06G13820 vs. Swiss-Prot
Match: PDX13_ARATH (Pyridoxal 5'-phosphate synthase subunit PDX1.3 OS=Arabidopsis thaliana GN=PDX13 PE=1 SV=2)

HSP 1 Score: 522.3 bits (1344), Expect = 3.6e-147
Identity = 268/312 (85.90%), Postives = 287/312 (91.99%), Query Frame = 1


Query: 1   MADTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
           M  TGVV VYGNG I EA KKSPFSVK GLAQMLRGGVIMDVVNA+QARIAEEAGACAVM
Sbjct: 1   MEGTGVVAVYGNGAITEA-KKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM 60

Query: 61  ALQRVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDE 120
           AL+RVPADIRAQGGVARMSDPQ+IKEIKQAVTIPVMA  RIGHFVEAQILEAI IDYIDE
Sbjct: 61  ALERVPADIRAQGGVARMSDPQMIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYIDE 120

Query: 121 SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGDIVEAVRH 180
           SEVLT AD+ +HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG+I+EAVRH
Sbjct: 121 SEVLTLADEDHHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRH 180

Query: 181 VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM 240
           VRSV GDIR+LRNMDDDEVF +AK++ APYDLVMQTKQLGRLPVV FAAGG+ATPADAA+
Sbjct: 181 VRSVNGDIRVLRNMDDDEVFTFAKKLAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAAL 240

Query: 241 MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQ 300
           MMQLGCDGVFVGSG+FKS DPARRARAIVQA THYSDP++L EVS GLGE M GINL+D+
Sbjct: 241 MMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPEMLVEVSCGLGEAMVGINLNDE 300

Query: 301 NVNVERYANRSE 313
              VER+ANRSE
Sbjct: 301 --KVERFANRSE 309

[Close]

BLAST of CSPI06G13820 vs. Swiss-Prot
Match: PDX1_PHAVU (Pyridoxal 5'-phosphate synthase subunit PDX1 OS=Phaseolus vulgaris GN=PDX1 PE=2 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 8.0e-147
Identity = 270/308 (87.66%), Postives = 284/308 (92.21%), Query Frame = 1


Query: 6   VVTVY-GNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVMALQR 65
           VV +Y GNG I E TKKSPFSVK GLAQMLRGGVIMDVVNA QARIAEEAGACAVMAL+R
Sbjct: 8   VVALYDGNGAITE-TKKSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMALER 67

Query: 66  VPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDESEVL 125
           VPADIRAQGGVARMSDPQLIKEIK+AVTIPVMA  RIGHFVEAQILEAI IDY+DESEVL
Sbjct: 68  VPADIRAQGGVARMSDPQLIKEIKRAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVL 127

Query: 126 TPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGDIVEAVRHVRSV 185
           T ADD NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG+I+EAVRHVRSV
Sbjct: 128 TLADDANHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSV 187

Query: 186 MGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAMMMQL 245
           M DIR+LRNMDDDEVF +AK I APYDLVMQTKQLGRLPVVHFAAGG+ATPADAA+MMQL
Sbjct: 188 MSDIRVLRNMDDDEVFTFAKSIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAALMMQL 247

Query: 246 GCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQNVNV 305
           GCDGVFVGSGVFKS DPA+RARAIVQA THYSDP++LAEVS GLGE M GINLSD   NV
Sbjct: 248 GCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPEILAEVSCGLGEAMVGINLSD--TNV 307

Query: 306 ERYANRSE 313
           ER+ANRSE
Sbjct: 308 ERFANRSE 312

[Close]

BLAST of CSPI06G13820 vs. Swiss-Prot
Match: PDX1_GINBI (Probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Ginkgo biloba GN=PDX1 PE=2 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 1.1e-140
Identity = 258/312 (82.69%), Postives = 280/312 (89.74%), Query Frame = 1


Query: 1   MADTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
           MA  GVVTVYG+G I + TK S ++VK GLAQMLRGGVIMDVVNA+QARIAEEAGA AVM
Sbjct: 1   MASDGVVTVYGDGAITD-TKVSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVM 60

Query: 61  ALQRVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDE 120
           AL+RVPADIRAQGGVARMSDP LIKEIK AVTIPVMA  RIGHFVEAQILEAI IDYIDE
Sbjct: 61  ALERVPADIRAQGGVARMSDPGLIKEIKSAVTIPVMAKARIGHFVEAQILEAIGIDYIDE 120

Query: 121 SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGDIVEAVRH 180
           SEVLTPADD +HINKHNFRIPFVCGCRNLGEALRRI EGAAMIRTKGEAGTG+++EAVRH
Sbjct: 121 SEVLTPADDXHHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVIEAVRH 180

Query: 181 VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM 240
           VRSV+GDIR L+++DDDEVF +AKQI APY+LV QTKQLGRLPVV+FAAGG+ATPADAA+
Sbjct: 181 VRSVLGDIRKLQSLDDDEVFAFAKQIAAPYELVRQTKQLGRLPVVNFAAGGVATPADAAL 240

Query: 241 MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQ 300
           MMQLGCDGVFVGSGVFKS DPARRARAIVQA THY+DP +LAEVS  LGE M GINL D+
Sbjct: 241 MMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYNDPHILAEVSCSLGEAMVGINLKDE 300

Query: 301 NVNVERYANRSE 313
              VERYA RSE
Sbjct: 301 --KVERYAERSE 309

[Close]

BLAST of CSPI06G13820 vs. Swiss-Prot
Match: PDX11_ARATH (Pyridoxal 5'-phosphate synthase subunit PDX1.1 OS=Arabidopsis thaliana GN=PDX11 PE=1 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 1.9e-140
Identity = 254/312 (81.41%), Postives = 280/312 (89.74%), Query Frame = 1


Query: 1   MADTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
           MA TGVV VYG G + E  +KSPFSVK GLAQMLRGGVIMDVVNA+QARIAEEAGACAVM
Sbjct: 1   MAGTGVVAVYGEGAMTETKQKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM 60

Query: 61  ALQRVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDE 120
           AL+RVPADIRAQGGVARMSDP++IKEIK AVTIPVMA  RIGHFVEAQILEAI +DY+DE
Sbjct: 61  ALERVPADIRAQGGVARMSDPEMIKEIKNAVTIPVMAKARIGHFVEAQILEAIGVDYVDE 120

Query: 121 SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGDIVEAVRH 180
           SEVLT AD+ NHINKHNF+IPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG++VEAVRH
Sbjct: 121 SEVLTLADEDNHINKHNFKIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVVEAVRH 180

Query: 181 VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM 240
           VRSV G IR+LR+MDDDEVF YAK+I APYDLV+QTK+LGRLPVV FAAGG+ATPADAA+
Sbjct: 181 VRSVNGAIRLLRSMDDDEVFTYAKKIAAPYDLVVQTKELGRLPVVQFAAGGVATPADAAL 240

Query: 241 MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQ 300
           MMQLGCDGVFVGSGVFKS DP +RA+AIVQA T+Y D  VLAEVS GLGE M G+NL D+
Sbjct: 241 MMQLGCDGVFVGSGVFKSGDPVKRAKAIVQAVTNYRDAAVLAEVSCGLGEAMVGLNLDDK 300

Query: 301 NVNVERYANRSE 313
              VER+A+RSE
Sbjct: 301 ---VERFASRSE 309

[Close]

BLAST of CSPI06G13820 vs. TrEMBL
Match: A0A0A0KBM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G185290 PE=3 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 1.7e-172
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 1


Query: 1   MADTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
           MADTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM
Sbjct: 1   MADTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60

Query: 61  ALQRVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDE 120
           ALQRVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDE
Sbjct: 61  ALQRVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDE 120

Query: 121 SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGDIVEAVRH 180
           SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGDIVEAVRH
Sbjct: 121 SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGDIVEAVRH 180

Query: 181 VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM 240
           VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM
Sbjct: 181 VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM 240

Query: 241 MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQ 300
           MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQ
Sbjct: 241 MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQ 300

Query: 301 NVNVERYANRSE 313
           NVNVERYANRSE
Sbjct: 301 NVNVERYANRSE 312

[Close]

BLAST of CSPI06G13820 vs. TrEMBL
Match: A0A067LDC5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08463 PE=3 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 1.1e-153
Identity = 281/312 (90.06%), Postives = 294/312 (94.23%), Query Frame = 1


Query: 1   MADTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
           MADTGVVTVYGNG I E TKKSPFSVK GLAQMLRGGVIMDVVNA+QARIAEEAGACAVM
Sbjct: 1   MADTGVVTVYGNGAIYETTKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM 60

Query: 61  ALQRVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDE 120
           AL+RVPADIRAQGGVARMSDPQLIKEIKQ+VTIPVMA  RIGHFVEAQILEAI IDYIDE
Sbjct: 61  ALERVPADIRAQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYIDE 120

Query: 121 SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGDIVEAVRH 180
           SEVLTPAD++NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG+IVEAVRH
Sbjct: 121 SEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRH 180

Query: 181 VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM 240
           VRSVMGDIR+LRNMDDDEVF +AK+I APYDLVMQTKQLGRLPVVHFAAGG+ATPADAA+
Sbjct: 181 VRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAL 240

Query: 241 MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQ 300
           MMQLGCDGVFVGSGVFKS DPARRARAIVQA THYSDPDVLA+VS GLGE M GINL+D 
Sbjct: 241 MMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDVLADVSCGLGEAMVGINLNDD 300

Query: 301 NVNVERYANRSE 313
              VERYANRSE
Sbjct: 301 --KVERYANRSE 310

[Close]

BLAST of CSPI06G13820 vs. TrEMBL
Match: W9RXB1_9ROSA (Putative pyridoxal biosynthesis protein PDX1 OS=Morus notabilis GN=L484_022003 PE=3 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 2.9e-151
Identity = 275/312 (88.14%), Postives = 292/312 (93.59%), Query Frame = 1


Query: 1   MADTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
           MADTGVVTVYGNG I E  KKSPFSVK GLAQMLRGGVIMDVVNA+QAR+AEEAGACAVM
Sbjct: 1   MADTGVVTVYGNGAIYETAKKSPFSVKVGLAQMLRGGVIMDVVNAEQARVAEEAGACAVM 60

Query: 61  ALQRVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDE 120
           AL+RVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMA  RIGHFVEAQILEAI IDY+DE
Sbjct: 61  ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDE 120

Query: 121 SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGDIVEAVRH 180
           SEVLT AD++NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG+++EAVRH
Sbjct: 121 SEVLTVADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVIEAVRH 180

Query: 181 VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM 240
           VRSVMGDIR+LRNMDDDEVF +AK+I APYDLVMQTKQLGRLPVV FAAGG+ATPADAA+
Sbjct: 181 VRSVMGDIRVLRNMDDDEVFSFAKKIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAAL 240

Query: 241 MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQ 300
           MMQLGCDGVFVGSGVFKS DPARRARAIVQA THYSDPDVLA+VS GLGE M GINL+D+
Sbjct: 241 MMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDVLADVSCGLGEAMVGINLNDE 300

Query: 301 NVNVERYANRSE 313
              VERYANRSE
Sbjct: 301 --KVERYANRSE 310

[Close]

BLAST of CSPI06G13820 vs. TrEMBL
Match: A0A068VB89_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00009443001 PE=3 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 2.4e-150
Identity = 274/312 (87.82%), Postives = 290/312 (92.95%), Query Frame = 1


Query: 1   MADTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
           MA +GVVTVYGNG I E  KKSPFSVK GLAQMLRGGVIMDVV  +QARIAEEAGACAVM
Sbjct: 1   MAGSGVVTVYGNGAITETAKKSPFSVKVGLAQMLRGGVIMDVVTPEQARIAEEAGACAVM 60

Query: 61  ALQRVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDE 120
           AL+RVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMA  RIGHFVEAQILEAI IDY+DE
Sbjct: 61  ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDE 120

Query: 121 SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGDIVEAVRH 180
           SEVLTPADD+NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG+I+EAVRH
Sbjct: 121 SEVLTPADDENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRH 180

Query: 181 VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM 240
           VRSVMGDIR+LRNMDDDEVF +AK+I +PYDLVMQTKQLGRLPVVHFAAGG+ATPADAA+
Sbjct: 181 VRSVMGDIRVLRNMDDDEVFAFAKKIQSPYDLVMQTKQLGRLPVVHFAAGGVATPADAAL 240

Query: 241 MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQ 300
           MMQLGCDGVFVGSGVFKS DPARRARAIVQA THYSDP+VLA+VS GLGE M GINL+D 
Sbjct: 241 MMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPEVLADVSCGLGEAMVGINLNDD 300

Query: 301 NVNVERYANRSE 313
              VERYANRSE
Sbjct: 301 --KVERYANRSE 310

[Close]

BLAST of CSPI06G13820 vs. TrEMBL
Match: A0A068ULW3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028422001 PE=3 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 3.2e-150
Identity = 274/312 (87.82%), Postives = 290/312 (92.95%), Query Frame = 1


Query: 1   MADTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
           MA +GVVTVYGNG I E  KKSPFSVK GLAQMLRGGVIMDVV  +QARIAEEAGACAVM
Sbjct: 1   MAGSGVVTVYGNGAITETAKKSPFSVKVGLAQMLRGGVIMDVVTPEQARIAEEAGACAVM 60

Query: 61  ALQRVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDE 120
           AL+RVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMA  RIGHFVEAQILEAI IDY+DE
Sbjct: 61  ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDE 120

Query: 121 SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGDIVEAVRH 180
           SEVLTPADD+NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG+I+EAVRH
Sbjct: 121 SEVLTPADDENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRH 180

Query: 181 VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM 240
           VRSVMGDIR+LRNMDDDEVF +AK+I +PYDLVMQTKQLGRLPVVHFAAGG+ATPADAA+
Sbjct: 181 VRSVMGDIRVLRNMDDDEVFSFAKKIQSPYDLVMQTKQLGRLPVVHFAAGGVATPADAAL 240

Query: 241 MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQ 300
           MMQLGCDGVFVGSGVFKS DPARRARAIVQA THYSDP+VLA+VS GLGE M GINL+D 
Sbjct: 241 MMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPEVLADVSCGLGEAMVGINLNDD 300

Query: 301 NVNVERYANRSE 313
              VERYANRSE
Sbjct: 301 --KVERYANRSE 310

[Close]

BLAST of CSPI06G13820 vs. TAIR10
Match: AT5G01410.1 (AT5G01410.1 Aldolase-type TIM barrel family protein)

HSP 1 Score: 522.3 bits (1344), Expect = 2.0e-148
Identity = 268/312 (85.90%), Postives = 287/312 (91.99%), Query Frame = 1


Query: 1   MADTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
           M  TGVV VYGNG I EA KKSPFSVK GLAQMLRGGVIMDVVNA+QARIAEEAGACAVM
Sbjct: 1   MEGTGVVAVYGNGAITEA-KKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM 60

Query: 61  ALQRVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDE 120
           AL+RVPADIRAQGGVARMSDPQ+IKEIKQAVTIPVMA  RIGHFVEAQILEAI IDYIDE
Sbjct: 61  ALERVPADIRAQGGVARMSDPQMIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYIDE 120

Query: 121 SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGDIVEAVRH 180
           SEVLT AD+ +HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG+I+EAVRH
Sbjct: 121 SEVLTLADEDHHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRH 180

Query: 181 VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM 240
           VRSV GDIR+LRNMDDDEVF +AK++ APYDLVMQTKQLGRLPVV FAAGG+ATPADAA+
Sbjct: 181 VRSVNGDIRVLRNMDDDEVFTFAKKLAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAAL 240

Query: 241 MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQ 300
           MMQLGCDGVFVGSG+FKS DPARRARAIVQA THYSDP++L EVS GLGE M GINL+D+
Sbjct: 241 MMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPEMLVEVSCGLGEAMVGINLNDE 300

Query: 301 NVNVERYANRSE 313
              VER+ANRSE
Sbjct: 301 --KVERFANRSE 309

[Close]

BLAST of CSPI06G13820 vs. TAIR10
Match: AT2G38230.1 (AT2G38230.1 pyridoxine biosynthesis 1.1)

HSP 1 Score: 500.0 bits (1286), Expect = 1.1e-141
Identity = 254/312 (81.41%), Postives = 280/312 (89.74%), Query Frame = 1


Query: 1   MADTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
           MA TGVV VYG G + E  +KSPFSVK GLAQMLRGGVIMDVVNA+QARIAEEAGACAVM
Sbjct: 1   MAGTGVVAVYGEGAMTETKQKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM 60

Query: 61  ALQRVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDE 120
           AL+RVPADIRAQGGVARMSDP++IKEIK AVTIPVMA  RIGHFVEAQILEAI +DY+DE
Sbjct: 61  ALERVPADIRAQGGVARMSDPEMIKEIKNAVTIPVMAKARIGHFVEAQILEAIGVDYVDE 120

Query: 121 SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGDIVEAVRH 180
           SEVLT AD+ NHINKHNF+IPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG++VEAVRH
Sbjct: 121 SEVLTLADEDNHINKHNFKIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVVEAVRH 180

Query: 181 VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM 240
           VRSV G IR+LR+MDDDEVF YAK+I APYDLV+QTK+LGRLPVV FAAGG+ATPADAA+
Sbjct: 181 VRSVNGAIRLLRSMDDDEVFTYAKKIAAPYDLVVQTKELGRLPVVQFAAGGVATPADAAL 240

Query: 241 MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQ 300
           MMQLGCDGVFVGSGVFKS DP +RA+AIVQA T+Y D  VLAEVS GLGE M G+NL D+
Sbjct: 241 MMQLGCDGVFVGSGVFKSGDPVKRAKAIVQAVTNYRDAAVLAEVSCGLGEAMVGLNLDDK 300

Query: 301 NVNVERYANRSE 313
              VER+A+RSE
Sbjct: 301 ---VERFASRSE 309

[Close]

BLAST of CSPI06G13820 vs. TAIR10
Match: AT3G16050.1 (AT3G16050.1 pyridoxine biosynthesis 1.2)

HSP 1 Score: 377.1 bits (967), Expect = 1.1e-104
Identity = 186/301 (61.79%), Postives = 236/301 (78.41%), Query Frame = 1


Query: 3   DTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVMAL 62
           D G VT+Y    I +A K  PFSVK GLAQ+LRGG I++V +  QA++AE AGAC+V+  
Sbjct: 10  DQGAVTLYSGTAITDAKKNHPFSVKVGLAQVLRGGAIVEVSSVNQAKLAESAGACSVI-- 69

Query: 63  QRVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDESE 122
             V   +R++GGV RM DP LIKE+K+AV++PVMA  R+GHFVEAQILE++ +DYIDESE
Sbjct: 70  --VSDPVRSRGGVRRMPDPVLIKEVKRAVSVPVMARARVGHFVEAQILESLAVDYIDESE 129

Query: 123 VLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGE-AGTGDIVEAVRHV 182
           +++ ADD + INKHNFR PF+CGCR+ GEALRRIREGAAMIR +G+   TG+I E V++V
Sbjct: 130 IISVADDDHFINKHNFRSPFICGCRDTGEALRRIREGAAMIRIQGDLTATGNIAETVKNV 189

Query: 183 RSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAMM 242
           RS+MG++R+L NMDDDEVF +AK+I APYDLV QTKQ+GR+PVV FA+GGI TPADAA+M
Sbjct: 190 RSLMGEVRVLNNMDDDEVFTFAKKISAPYDLVAQTKQMGRVPVVQFASGGITTPADAALM 249

Query: 243 MQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQN 302
           MQLGCDGVFVGS VF   DP ++ R+IVQA  HY+DP VLAE+S GL   M  +N+    
Sbjct: 250 MQLGCDGVFVGSEVFDGPDPFKKLRSIVQAVQHYNDPHVLAEMSSGLENAMESLNVRGDR 306

[Close]

BLAST of CSPI06G13820 vs. TAIR10
Match: AT2G38210.1 (AT2G38210.1 putative PDX1-like protein 4)

HSP 1 Score: 124.8 bits (312), Expect = 9.5e-29
Identity = 65/77 (84.42%), Postives = 69/77 (89.61%), Query Frame = 1


Query: 1  MADTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
          MA TGVV VYG G + E  +KSPFSVK GLAQMLRGGVIMDVVNA+QARIAEEAGACAVM
Sbjct: 1  MAGTGVVAVYGEGAMTETKQKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM 60

Query: 61 ALQRVPADIRAQGGVAR 78
          AL+RVPADIRAQGGVAR
Sbjct: 61 ALERVPADIRAQGGVAR 77

[Close]

BLAST of CSPI06G13820 vs. NCBI nr
Match: gi|449450818|ref|XP_004143159.1| (PREDICTED: probable pyridoxal 5'-phosphate synthase subunit PDX1 [Cucumis sativus])

HSP 1 Score: 613.2 bits (1580), Expect = 2.5e-172
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 1


Query: 1   MADTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
           MADTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM
Sbjct: 1   MADTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60

Query: 61  ALQRVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDE 120
           ALQRVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDE
Sbjct: 61  ALQRVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDE 120

Query: 121 SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGDIVEAVRH 180
           SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGDIVEAVRH
Sbjct: 121 SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGDIVEAVRH 180

Query: 181 VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM 240
           VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM
Sbjct: 181 VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM 240

Query: 241 MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQ 300
           MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQ
Sbjct: 241 MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQ 300

Query: 301 NVNVERYANRSE 313
           NVNVERYANRSE
Sbjct: 301 NVNVERYANRSE 312

[Close]

BLAST of CSPI06G13820 vs. NCBI nr
Match: gi|659128082|ref|XP_008464036.1| (PREDICTED: probable pyridoxal biosynthesis protein PDX1 [Cucumis melo])

HSP 1 Score: 602.4 bits (1552), Expect = 4.4e-169
Identity = 306/312 (98.08%), Postives = 310/312 (99.36%), Query Frame = 1


Query: 1   MADTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
           MADTGVVTVYGNGVICEATKKSPFSVKA LAQMLRGGVIMDVVNAQQARIAEEAGACAVM
Sbjct: 1   MADTGVVTVYGNGVICEATKKSPFSVKASLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60

Query: 61  ALQRVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDE 120
           AL++VPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAI IDYIDE
Sbjct: 61  ALEKVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIGIDYIDE 120

Query: 121 SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGDIVEAVRH 180
           SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG+IVEAVRH
Sbjct: 121 SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRH 180

Query: 181 VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM 240
           VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM
Sbjct: 181 VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM 240

Query: 241 MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQ 300
           MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSD+
Sbjct: 241 MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDR 300

Query: 301 NVNVERYANRSE 313
           NVNVERYANRSE
Sbjct: 301 NVNVERYANRSE 312

[Close]

BLAST of CSPI06G13820 vs. NCBI nr
Match: gi|802538289|ref|XP_012067529.1| (PREDICTED: probable pyridoxal 5'-phosphate synthase subunit PDX1 [Jatropha curcas])

HSP 1 Score: 550.8 bits (1418), Expect = 1.5e-153
Identity = 281/312 (90.06%), Postives = 294/312 (94.23%), Query Frame = 1


Query: 1   MADTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
           MADTGVVTVYGNG I E TKKSPFSVK GLAQMLRGGVIMDVVNA+QARIAEEAGACAVM
Sbjct: 1   MADTGVVTVYGNGAIYETTKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM 60

Query: 61  ALQRVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDE 120
           AL+RVPADIRAQGGVARMSDPQLIKEIKQ+VTIPVMA  RIGHFVEAQILEAI IDYIDE
Sbjct: 61  ALERVPADIRAQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYIDE 120

Query: 121 SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGDIVEAVRH 180
           SEVLTPAD++NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG+IVEAVRH
Sbjct: 121 SEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRH 180

Query: 181 VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM 240
           VRSVMGDIR+LRNMDDDEVF +AK+I APYDLVMQTKQLGRLPVVHFAAGG+ATPADAA+
Sbjct: 181 VRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAL 240

Query: 241 MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQ 300
           MMQLGCDGVFVGSGVFKS DPARRARAIVQA THYSDPDVLA+VS GLGE M GINL+D 
Sbjct: 241 MMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDVLADVSCGLGEAMVGINLNDD 300

Query: 301 NVNVERYANRSE 313
              VERYANRSE
Sbjct: 301 --KVERYANRSE 310

[Close]

BLAST of CSPI06G13820 vs. NCBI nr
Match: gi|1009114713|ref|XP_015873834.1| (PREDICTED: probable pyridoxal 5'-phosphate synthase subunit PDX1 [Ziziphus jujuba])

HSP 1 Score: 543.5 bits (1399), Expect = 2.4e-151
Identity = 276/312 (88.46%), Postives = 292/312 (93.59%), Query Frame = 1


Query: 1   MADTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
           MADTGVVTVYGNG I E  KKSPFSVK G+AQMLRGGVIMDVVNA+QARIAEEAGACAVM
Sbjct: 1   MADTGVVTVYGNGAIYETAKKSPFSVKVGMAQMLRGGVIMDVVNAEQARIAEEAGACAVM 60

Query: 61  ALQRVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDE 120
           AL+RVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMA  RIGHFVEAQILEAI IDY+DE
Sbjct: 61  ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDE 120

Query: 121 SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGDIVEAVRH 180
           SEVLT AD++NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG++VEAVRH
Sbjct: 121 SEVLTVADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVVEAVRH 180

Query: 181 VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM 240
           VRSVMGDIR+LRNMDDDEVF +AK+I APYDLVMQTKQLGRLPVVHFAAGG+ATPADAA+
Sbjct: 181 VRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAL 240

Query: 241 MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQ 300
           MMQLGCDGVFVGSGVFKS DPARRARAIVQA THYSDPDVLA+VS GLGE M GINL+D 
Sbjct: 241 MMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDVLADVSCGLGEAMVGINLNDS 300

Query: 301 NVNVERYANRSE 313
              VER+ANRSE
Sbjct: 301 --KVERFANRSE 310

[Close]

BLAST of CSPI06G13820 vs. NCBI nr
Match: gi|703130511|ref|XP_010104626.1| (putative pyridoxal biosynthesis protein PDX1 [Morus notabilis])

HSP 1 Score: 542.7 bits (1397), Expect = 4.1e-151
Identity = 275/312 (88.14%), Postives = 292/312 (93.59%), Query Frame = 1


Query: 1   MADTGVVTVYGNGVICEATKKSPFSVKAGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
           MADTGVVTVYGNG I E  KKSPFSVK GLAQMLRGGVIMDVVNA+QAR+AEEAGACAVM
Sbjct: 1   MADTGVVTVYGNGAIYETAKKSPFSVKVGLAQMLRGGVIMDVVNAEQARVAEEAGACAVM 60

Query: 61  ALQRVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMANVRIGHFVEAQILEAIDIDYIDE 120
           AL+RVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMA  RIGHFVEAQILEAI IDY+DE
Sbjct: 61  ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDE 120

Query: 121 SEVLTPADDKNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGDIVEAVRH 180
           SEVLT AD++NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG+++EAVRH
Sbjct: 121 SEVLTVADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVIEAVRH 180

Query: 181 VRSVMGDIRMLRNMDDDEVFCYAKQIGAPYDLVMQTKQLGRLPVVHFAAGGIATPADAAM 240
           VRSVMGDIR+LRNMDDDEVF +AK+I APYDLVMQTKQLGRLPVV FAAGG+ATPADAA+
Sbjct: 181 VRSVMGDIRVLRNMDDDEVFSFAKKIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAAL 240

Query: 241 MMQLGCDGVFVGSGVFKSSDPARRARAIVQAATHYSDPDVLAEVSFGLGEPMAGINLSDQ 300
           MMQLGCDGVFVGSGVFKS DPARRARAIVQA THYSDPDVLA+VS GLGE M GINL+D+
Sbjct: 241 MMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDVLADVSCGLGEAMVGINLNDE 300

Query: 301 NVNVERYANRSE 313
              VERYANRSE
Sbjct: 301 --KVERYANRSE 310

The following BLAST results are available for this feature:

BLAST of CSPI06G13820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PDX1_HEVBR	5.4e-151	87.50	Probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Hevea brasiliensis GN=P...	[more]
PDX13_ARATH	3.6e-147	85.90	Pyridoxal 5'-phosphate synthase subunit PDX1.3 OS=Arabidopsis thaliana GN=PDX13 ...	[more]
PDX1_PHAVU	8.0e-147	87.66	Pyridoxal 5'-phosphate synthase subunit PDX1 OS=Phaseolus vulgaris GN=PDX1 PE=2 ...	[more]
PDX1_GINBI	1.1e-140	82.69	Probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Ginkgo biloba GN=PDX1 P...	[more]
PDX11_ARATH	1.9e-140	81.41	Pyridoxal 5'-phosphate synthase subunit PDX1.1 OS=Arabidopsis thaliana GN=PDX11 ...	[more]

BLAST of CSPI06G13820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBM5_CUCSA	1.7e-172	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G185290 PE=3 SV=1	[more]
A0A067LDC5_JATCU	1.1e-153	90.06	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08463 PE=3 SV=1	[more]
W9RXB1_9ROSA	2.9e-151	88.14	Putative pyridoxal biosynthesis protein PDX1 OS=Morus notabilis GN=L484_022003 P...	[more]
A0A068VB89_COFCA	2.4e-150	87.82	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00009443001 PE=3 SV=1	[more]
A0A068ULW3_COFCA	3.2e-150	87.82	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028422001 PE=3 SV=1	[more]

BLAST of CSPI06G13820 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G01410.1	2.0e-148	85.90	Aldolase-type TIM barrel family protein	[more]
AT2G38230.1	1.1e-141	81.41	pyridoxine biosynthesis 1.1	[more]
AT3G16050.1	1.1e-104	61.79	pyridoxine biosynthesis 1.2	[more]
AT2G38210.1	9.5e-29	84.42	putative PDX1-like protein 4	[more]

BLAST of CSPI06G13820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449450818\|ref\|XP_004143159.1\|	2.5e-172	100.00	PREDICTED: probable pyridoxal 5'-phosphate synthase subunit PDX1 [Cucumis sativu...	[more]
gi\|659128082\|ref\|XP_008464036.1\|	4.4e-169	98.08	PREDICTED: probable pyridoxal biosynthesis protein PDX1 [Cucumis melo]	[more]
gi\|802538289\|ref\|XP_012067529.1\|	1.5e-153	90.06	PREDICTED: probable pyridoxal 5'-phosphate synthase subunit PDX1 [Jatropha curca...	[more]
gi\|1009114713\|ref\|XP_015873834.1\|	2.4e-151	88.46	PREDICTED: probable pyridoxal 5'-phosphate synthase subunit PDX1 [Ziziphus jujub...	[more]
gi\|703130511\|ref\|XP_010104626.1\|	4.1e-151	88.14	putative pyridoxal biosynthesis protein PDX1 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001852	PdxS/SNZ
IPR011060	RibuloseP-bd_barrel
IPR013785	Aldolase_TIM

Vocabulary: **Biological Process**
Term	Definition
GO:0042819	vitamin B6 biosynthetic process
GO:0042823	pyridoxal phosphate biosynthetic process
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006520	cellular amino acid metabolic process
biological_process	GO:0010335	response to non-ionic osmotic stress
biological_process	GO:0008152	metabolic process
biological_process	GO:0042819	vitamin B6 biosynthetic process
biological_process	GO:0015994	chlorophyll metabolic process
biological_process	GO:0010224	response to UV-B
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0006982	response to lipid hydroperoxide
biological_process	GO:0042823	pyridoxal phosphate biosynthetic process
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0042538	hyperosmotic salinity response
cellular_component	GO:0005829	cytosol
cellular_component	GO:0012505	endomembrane system
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0036381	pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G13820.1	CSPI06G13820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001852	Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ	HAMAP	MF_01824	PdxS	coord: 21..312 score: 49
IPR001852	Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ	PIR	PIRSF029271	Pdx1	coord: 13..311 score: 8.4E
IPR001852	Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ	PFAM	PF01680	SOR_SNZ	coord: 24..229 score: 1.5E
IPR001852	Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ	TIGRFAMs	TIGR00343	TIGR00343	coord: 26..301 score: 1.0E
IPR001852	Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ	PROSITE	PS01235	PDXS_SNZ_1	coord: 222..240 scor
IPR001852	Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ	PROFILE	PS51129	PDXS_SNZ_2	coord: 26..312 score: 161
IPR011060	Ribulose-phosphate binding barrel	unknown	SSF51366	Ribulose-phoshate binding barrel	coord: 35..283 score: 2.73
IPR013785	Aldolase-type TIM barrel	GENE3D	G3DSA:3.20.20.70		coord: 41..177 score: 2.3E-51coord: 209..296 score: 2.3
None	No IPR available	PANTHER	PTHR31829	FAMILY NOT NAMED	coord: 5..312 score: 3.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G13820	Cla013363	Watermelon (97103) v1	cpiwmB530
CSPI06G13820	Csa6G185290	Cucumber (Chinese Long) v2	cpicuB314
CSPI06G13820	MELO3C025846	Melon (DHL92) v3.5.1	cpimeB434
CSPI06G13820	ClCG02G019530	Watermelon (Charleston Gray)	cpiwcgB458
CSPI06G13820	Lsi10G014360	Bottle gourd (USVL1VR-Ls)	cpilsiB416
CSPI06G13820	MELO3C025846.2	Melon (DHL92) v3.6.1	cpimedB432
CSPI06G13820	CsaV3_6G016200	Cucumber (Chinese Long) v3	cpicucB364
CSPI06G13820	Cla97C02G045540	Watermelon (97103) v2	cpiwmbB451
CSPI06G13820	Cucsa.139260	Cucumber (Gy14) v1	cgycpiB205
CSPI06G13820	CmaCh20G003460	Cucurbita maxima (Rimu)	cmacpiB559
CSPI06G13820	CmaCh06G002300	Cucurbita maxima (Rimu)	cmacpiB858
CSPI06G13820	CmoCh20G003700	Cucurbita moschata (Rifu)	cmocpiB548
CSPI06G13820	CmoCh06G002230	Cucurbita moschata (Rifu)	cmocpiB841
CSPI06G13820	Cp4.1LG16g06560	Cucurbita pepo (Zucchini)	cpecpiB292
CSPI06G13820	Cp4.1LG03g02850	Cucurbita pepo (Zucchini)	cpecpiB630
CSPI06G13820	Cp4.1LG08g12230	Cucurbita pepo (Zucchini)	cpecpiB882
CSPI06G13820	CsGy6G013720	Cucumber (Gy14) v2	cgybcpiB288
CSPI06G13820	Carg03364	Silver-seed gourd	carcpiB0373
CSPI06G13820	Carg12478	Silver-seed gourd	carcpiB1039
CSPI06G13820	Carg01104	Silver-seed gourd	carcpiB0189

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G13820	Cucurbita maxima (Rimu)	cmacpiB622
CSPI06G13820	Cucurbita moschata (Rifu)	cmocpiB615
CSPI06G13820	Cucumber (Chinese Long) v2	cpicuB311
CSPI06G13820	Watermelon (Charleston Gray)	cpiwcgB519
CSPI06G13820	Watermelon (97103) v1	cpiwmB507
CSPI06G13820	Cucurbita pepo (Zucchini)	cpecpiB755
CSPI06G13820	Silver-seed gourd	carcpiB0551
CSPI06G13820	Cucumber (Chinese Long) v3	cpicucB360
CSPI06G13820	Watermelon (97103) v2	cpiwmbB510
CSPI06G13820	Wax gourd	cpiwgoB610
CSPI06G13820	Wax gourd	cpiwgoB648
CSPI06G13820	Wild cucumber (PI 183967)	cpicpiB184