CSPI06G13630 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G13630
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionGag/pol polyprotein
LocationChr6 : 12110701 .. 12112712 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCTGGTCCATGGACCAACCAGGTTCAAACCCATAAAGCCCACTAGTGAACTCTATAAATAGAGGAATGCTCCTCATTTGTAGGGGTTGGAAAATTTTGACTCTAAAAGATCCAGAGAGAATTCTTCCAAGAGCTAGAAGACTCCCTAACTTCTGAAGTTGACCACCCTCGAAGATGTGTCTTGCACTATTCTCCTATCGAGAAGTTATGTGATGACCTACCAGACGATGAGGTTTTCTTCACAGAAGTTATGGAACCTTGGACTATGTACTTCGATGATGCAGCTCGAAGAAGTGGTGCGGGGGCAGGCATTGTCCACATTTCTCCTGAGAAGCATATGTTGCCTTATAGCTTTGCACTTTCCGAATTGTGTTCAAACAATGTGGCTGAATATCAGGCTTTGATAATTGGCCTTCAAATAGCATTAGAAATCGGAGTGTCATTCATAGAGGTCTATGGTGATTCAAAATTGATAATCAATCAACTCTCGCTTCAATATGACGTGAAACATGAAGACTTGAAGCCATATTTTGCTTATGCTCGACAATTGATGGAAAAGTTTGATAATGTGATGTTAGAACATGTCCCTAGAGTAGAAAATAAGAGAGCGGATGCATTGGCAAATTTAGCCACGGCCTTGACCATGCCAGATGATGTAACTCTGAACATACCACTTTGTCAACGATGGATTATACCCCCAGTTAGGCCTGAATGTCAGGAAGTGAACATAGCAACATCCTATTTGATTGATGAAGAAGATTGGCGTCAACCCATCATAGAGTATCTAGAACATGGAAAGCTTCCAAAGGATTCTCGTCATAAAATTGAGATACGAAGAAGGGCAGCACACTTCATTTATTACAAGGGAACTTTATATCGCCGTTCTCTTGAAGGGCTCTTCCTTCGATGTCTCGGAAAGGAAGATTCGGTAAAAGCTCTAAAGGAAGTACATGCAGGTGTTTGTGGAGCACATCAATCGGGACCAAAGCTTCAATTCCAGCTAAGAAGAATGGGCTACTACTGGCCTAAGATGATCCAAGATTCAATAGACTATGTGAAGAAGTGTGAGCCTTGTCAATACCATGCAAACTTCATACACCAACCTCCAGAACCTCTTCATCCAACTGTGGCTTCTTGGCCTTTTGAGGCTTGGGGACTCGATCTGGTTGGCCCCATTACACCAAAATCATCAGCAGGACATTCTTATATCCTAGCAGCAACAGACTATTTTTCAAGGTGGGCTGAGGCCATTTCCTTGAGAGAAGCCAAGAAGGAGAACGTGGCAGACTTTATTCGAACACACATCATCTATCGATACGGTATTCCACATCGAATCGTGACGGATAATGGAAAGCAATTCTCCAATAGTATGATGGACAAGTTATGTGAAAAATTCAAATTCAAGCAATATAAGTCATCCATGTACAACGCAGCTGCGAATGGACTAGCAGAAGCATTCAACAAAACATTGTGTAATCTTTTAAAGAAAATTGTCTCCAAGTCAAAGAGGGATTGGCAAGAAAAGATCGGCGAGGCATTATGGGCTTATCGGACGACTCATCGCACCCCTACAGGGGTTACACCATATTCGCTTGTTTACGGTGTGGAGGATGTCCTTCCTCTCGAAAGGGAAATTCCGTCACTAAGAATGGCAGTACAAGAGGGATTGACTACCGAAGATAATGTGAAGTTACGTCTTCAAGAATTAGAAGCACTTGACGAAAAGCGATTAGAGGCTCAGCAAGCATTGGAATGTTATCAAGCGAGAATGTCCAAAGCTTTTGATAAACACGTTAAACCTCGCTCCTTTCAAGTCGGTGATCTAGTACTTGCCGTAAGGAGACCGATCATCACAACAAGGCATACAGGAAATAAGTTCACACCTAAATGGGATGGACCCTACATTGTTAAAGAAGTTTATACAAATGGCGCATACAAGATCGTTGATCAAGACGGACTACGAATTGGCCCAATCAATGGTAAATTTCTTAAAAAATTTTATGCTTAA

mRNA sequence

ATGGGTCTGATCCAGAGAGAATTCTTCCAAGAGCTAGAAGACTCCCTAACTTCTGAAGTTGACCACCCTCGAAGATGTGTCTTGCACTATTCTCCTATCGAGAAGTTATGTGATGACCTACCAGACGATGAGGTTTTCTTCACAGAAGTTATGGAACCTTGGACTATGTACTTCGATGATGCAGCTCGAAGAAGTGGTGCGGGGGCAGGCATTGTCCACATTTCTCCTGAGAAGCATATGTTGCCTTATAGCTTTGCACTTTCCGAATTGTGTTCAAACAATGTGGCTGAATATCAGGCTTTGATAATTGGCCTTCAAATAGCATTAGAAATCGGAGTGTCATTCATAGAGGTCTATGGTGATTCAAAATTGATAATCAATCAACTCTCGCTTCAATATGACGTGAAACATGAAGACTTGAAGCCATATTTTGCTTATGCTCGACAATTGATGGAAAAGTTTGATAATGTGATGTTAGAACATGTCCCTAGAGTAGAAAATAAGAGAGCGGATGCATTGGCAAATTTAGCCACGGCCTTGACCATGCCAGATGATGTAACTCTGAACATACCACTTTGTCAACGATGGATTATACCCCCAGTTAGGCCTGAATGTCAGGAAGTGAACATAGCAACATCCTATTTGATTGATGAAGAAGATTGGCGTCAACCCATCATAGAGTATCTAGAACATGGAAAGCTTCCAAAGGATTCTCGTCATAAAATTGAGATACGAAGAAGGGCAGCACACTTCATTTATTACAAGGGAACTTTATATCGCCGTTCTCTTGAAGGGCTCTTCCTTCGATGTCTCGGAAAGGAAGATTCGGTAAAAGCTCTAAAGGAAGTACATGCAGGTGTTTGTGGAGCACATCAATCGGGACCAAAGCTTCAATTCCAGCTAAGAAGAATGGGCTACTACTGGCCTAAGATGATCCAAGATTCAATAGACTATGTGAAGAAGTGTGAGCCTTGTCAATACCATGCAAACTTCATACACCAACCTCCAGAACCTCTTCATCCAACTGTGGCTTCTTGGCCTTTTGAGGCTTGGGGACTCGATCTGGTTGGCCCCATTACACCAAAATCATCAGCAGGACATTCTTATATCCTAGCAGCAACAGACTATTTTTCAAGGTGGGCTGAGGCCATTTCCTTGAGAGAAGCCAAGAAGGAGAACGTGGCAGACTTTATTCGAACACACATCATCTATCGATACGGTATTCCACATCGAATCGTGACGGATAATGGAAAGCAATTCTCCAATAGTATGATGGACAAGTTATGTGAAAAATTCAAATTCAAGCAATATAAGTCATCCATGTACAACGCAGCTGCGAATGGACTAGCAGAAGCATTCAACAAAACATTGTGTAATCTTTTAAAGAAAATTGTCTCCAAGTCAAAGAGGGATTGGCAAGAAAAGATCGGCGAGGCATTATGGGCTTATCGGACGACTCATCGCACCCCTACAGGGGTTACACCATATTCGCTTGTTTACGGTGTGGAGGATGTCCTTCCTCTCGAAAGGGAAATTCCGTCACTAAGAATGGCAGTACAAGAGGGATTGACTACCGAAGATAATGTGAAGTTACGTCTTCAAGAATTAGAAGCACTTGACGAAAAGCGATTAGAGGCTCAGCAAGCATTGGAATGTTATCAAGCGAGAATGTCCAAAGCTTTTGATAAACACGTTAAACCTCGCTCCTTTCAAGTCGGTGATCTAGTACTTGCCGTAAGGAGACCGATCATCACAACAAGGCATACAGGAAATAAGTTCACACCTAAATGGGATGGACCCTACATTGTTAAAGAAGTTTATACAAATGGCGCATACAAGATCGTTGATCAAGACGGACTACGAATTGGCCCAATCAATGGTAAATTTCTTAAAAAATTTTATGCTTAA

Coding sequence (CDS)

ATGGGTCTGATCCAGAGAGAATTCTTCCAAGAGCTAGAAGACTCCCTAACTTCTGAAGTTGACCACCCTCGAAGATGTGTCTTGCACTATTCTCCTATCGAGAAGTTATGTGATGACCTACCAGACGATGAGGTTTTCTTCACAGAAGTTATGGAACCTTGGACTATGTACTTCGATGATGCAGCTCGAAGAAGTGGTGCGGGGGCAGGCATTGTCCACATTTCTCCTGAGAAGCATATGTTGCCTTATAGCTTTGCACTTTCCGAATTGTGTTCAAACAATGTGGCTGAATATCAGGCTTTGATAATTGGCCTTCAAATAGCATTAGAAATCGGAGTGTCATTCATAGAGGTCTATGGTGATTCAAAATTGATAATCAATCAACTCTCGCTTCAATATGACGTGAAACATGAAGACTTGAAGCCATATTTTGCTTATGCTCGACAATTGATGGAAAAGTTTGATAATGTGATGTTAGAACATGTCCCTAGAGTAGAAAATAAGAGAGCGGATGCATTGGCAAATTTAGCCACGGCCTTGACCATGCCAGATGATGTAACTCTGAACATACCACTTTGTCAACGATGGATTATACCCCCAGTTAGGCCTGAATGTCAGGAAGTGAACATAGCAACATCCTATTTGATTGATGAAGAAGATTGGCGTCAACCCATCATAGAGTATCTAGAACATGGAAAGCTTCCAAAGGATTCTCGTCATAAAATTGAGATACGAAGAAGGGCAGCACACTTCATTTATTACAAGGGAACTTTATATCGCCGTTCTCTTGAAGGGCTCTTCCTTCGATGTCTCGGAAAGGAAGATTCGGTAAAAGCTCTAAAGGAAGTACATGCAGGTGTTTGTGGAGCACATCAATCGGGACCAAAGCTTCAATTCCAGCTAAGAAGAATGGGCTACTACTGGCCTAAGATGATCCAAGATTCAATAGACTATGTGAAGAAGTGTGAGCCTTGTCAATACCATGCAAACTTCATACACCAACCTCCAGAACCTCTTCATCCAACTGTGGCTTCTTGGCCTTTTGAGGCTTGGGGACTCGATCTGGTTGGCCCCATTACACCAAAATCATCAGCAGGACATTCTTATATCCTAGCAGCAACAGACTATTTTTCAAGGTGGGCTGAGGCCATTTCCTTGAGAGAAGCCAAGAAGGAGAACGTGGCAGACTTTATTCGAACACACATCATCTATCGATACGGTATTCCACATCGAATCGTGACGGATAATGGAAAGCAATTCTCCAATAGTATGATGGACAAGTTATGTGAAAAATTCAAATTCAAGCAATATAAGTCATCCATGTACAACGCAGCTGCGAATGGACTAGCAGAAGCATTCAACAAAACATTGTGTAATCTTTTAAAGAAAATTGTCTCCAAGTCAAAGAGGGATTGGCAAGAAAAGATCGGCGAGGCATTATGGGCTTATCGGACGACTCATCGCACCCCTACAGGGGTTACACCATATTCGCTTGTTTACGGTGTGGAGGATGTCCTTCCTCTCGAAAGGGAAATTCCGTCACTAAGAATGGCAGTACAAGAGGGATTGACTACCGAAGATAATGTGAAGTTACGTCTTCAAGAATTAGAAGCACTTGACGAAAAGCGATTAGAGGCTCAGCAAGCATTGGAATGTTATCAAGCGAGAATGTCCAAAGCTTTTGATAAACACGTTAAACCTCGCTCCTTTCAAGTCGGTGATCTAGTACTTGCCGTAAGGAGACCGATCATCACAACAAGGCATACAGGAAATAAGTTCACACCTAAATGGGATGGACCCTACATTGTTAAAGAAGTTTATACAAATGGCGCATACAAGATCGTTGATCAAGACGGACTACGAATTGGCCCAATCAATGGTAAATTTCTTAAAAAATTTTATGCTTAA
Homology
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BLAST of CSPI06G13630 vs. Swiss-Prot
Match: POL4_DROME (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster GN=POL PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 7.1e-25
Identity = 86/347 (24.78%), Postives = 151/347 (43.52%), Query Frame = 1 

Query: 289  GAHQSGPKLQFQLRRMGYYWPKMIQDSIDYVKKCEPCQYHANFIHQPPEPLHPTVASWPF 348
            G H    K   +++R  YYW  M +   +YV+KC+ CQ      H              F
Sbjct: 907  GGHTGITKTLAKVKRH-YYWKNMSKYIKEYVRKCQKCQKAKTTKHTKTPMTITETPEHAF 966

Query: 349  EAWGLDLVGPITPKSSAGHSYILAATDYFSRWAEAISLREAKKENVADFIRTHIIYRYGI 408
            +   +D +GP+ PKS  G+ Y +      +++  AI +     + VA  I    I +YG 
Sbjct: 967  DRVVVDTIGPL-PKSENGNEYAVTLICDLTKYLVAIPIANKSAKTVAKAIFESFILKYGP 1026

Query: 409  PHRIVTDNGKQFSNSMMDKLCEKFKFKQYKSSMYNAAANGLAEAFNKTLCNLLKKIVSKS 468
                +TD G ++ NS++  LC+  K K   S+ ++    G+ E  ++TL   ++  +S  
Sbjct: 1027 MKTFITDMGTEYKNSIITDLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYIRSYISTD 1086

Query: 469  KRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEDVLPLEREIPSLRMAVQEGLTTEDN 528
            K DW   +   ++ + TT        PY LV+G    LP  +    L  +++     +D 
Sbjct: 1087 KTDWDVWLQYFVYCFNTTQSMVHNYCPYELVFGRTSNLP--KHFNKLH-SIEPIYNIDDY 1146

Query: 529  VKLRLQELEALDEKRLEAQQALECYQARMSKAFDKHVKPRSFQVGDLVLAVRRPIITTRH 588
             K     LE    +   A++ LE ++ +  + +D  VK    +VGD VL           
Sbjct: 1147 AKESKYRLEVAYAR---ARKLLEAHKEKNKENYDLKVKDIELEVGDKVL-------LRNE 1206

Query: 589  TGNKFTPKWDGPYIVKEVYTNGAYKIVDQDGLRIGPINGKFLKKFYA 636
             G+K   K+ GPY ++ +  N    ++     +   ++   LKKF++
Sbjct: 1207 VGHKLDFKYTGPYKIESIGDNNNITLLTNKNKK-QIVHKDRLKKFHS 1237

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BLAST of CSPI06G13630 vs. Swiss-Prot
Match: RNH_HALSA (Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=rnhA PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.7e-13
Identity = 49/123 (39.84%), Postives = 69/123 (56.10%), Query Frame = 1 

Query: 57  YFDDAARRSG--AGAGIVHISPEKHMLPYSFALSELCSNNVAEYQALIIGLQIALEIGVS 116
           YFD A+R +   A  G V +S +  ++          +NN AEY ALI  L+ A + G  
Sbjct: 73  YFDGASRGNPGPAAVGWVLVSGDGGIVAEGGDTIGRATNNQAEYDALIAALEAAADFGFD 132

Query: 117 FIEVYGDSKLIINQLSLQYDVKHEDLKPYFAYARQLMEKFDNVMLEHVPRVENKRADALA 176
            IE+ GDS+L+  QL+  +D    DL+     AR+L+  FD+  + HVPR  N+RADALA
Sbjct: 133 DIELRGDSQLVEKQLTGAWDTNDPDLRRKRVRARELLTGFDDWSITHVPRATNERADALA 192

Query: 177 NLA 178
           N A
Sbjct: 193 NEA 195

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BLAST of CSPI06G13630 vs. Swiss-Prot
Match: Y2228_MYCTO (Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT2287 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 7.6e-11
Identity = 37/84 (44.05%), Postives = 52/84 (61.90%), Query Frame = 1 

Query: 92  SNNVAEYQALIIGLQIALEIGVSFIEVYGDSKLIINQLSLQYDVKHEDLKPYFAYARQLM 151
           +NNVAEY+ LI GL  A+++G +   V  DSKL++ Q+S ++ VKH DL   +  A+ L 
Sbjct: 44  TNNVAEYRGLIAGLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALA 103

Query: 152 EKFDNVMLEHVPRVENKRADALAN 176
            +F  +  E VPR  N  AD LAN
Sbjct: 104 SQFRRINYEWVPRARNTYADRLAN 127

[Close]
BLAST of CSPI06G13630 vs. Swiss-Prot
Match: Y2228_MYCTU (Uncharacterized protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv2228c PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 7.6e-11
Identity = 37/84 (44.05%), Postives = 52/84 (61.90%), Query Frame = 1 

Query: 92  SNNVAEYQALIIGLQIALEIGVSFIEVYGDSKLIINQLSLQYDVKHEDLKPYFAYARQLM 151
           +NNVAEY+ LI GL  A+++G +   V  DSKL++ Q+S ++ VKH DL   +  A+ L 
Sbjct: 44  TNNVAEYRGLIAGLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALA 103

Query: 152 EKFDNVMLEHVPRVENKRADALAN 176
            +F  +  E VPR  N  AD LAN
Sbjct: 104 SQFRRINYEWVPRARNTYADRLAN 127

[Close]
BLAST of CSPI06G13630 vs. Swiss-Prot
Match: Y2253_MYCBO (Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb2253c PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 7.6e-11
Identity = 37/84 (44.05%), Postives = 52/84 (61.90%), Query Frame = 1 

Query: 92  SNNVAEYQALIIGLQIALEIGVSFIEVYGDSKLIINQLSLQYDVKHEDLKPYFAYARQLM 151
           +NNVAEY+ LI GL  A+++G +   V  DSKL++ Q+S ++ VKH DL   +  A+ L 
Sbjct: 44  TNNVAEYRGLIAGLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALA 103

Query: 152 EKFDNVMLEHVPRVENKRADALAN 176
            +F  +  E VPR  N  AD LAN
Sbjct: 104 SQFRRINYEWVPRARNTYADRLAN 127

[Close]
BLAST of CSPI06G13630 vs. TrEMBL
Match: Q9FE41_ORYSJ (Similar to Arabidopsis thaliana chromosome II BAC F26H6 OS=Oryza sativa subsp. japonica PE=4 SV=1)

HSP 1 Score: 628.6 bits (1620), Expect = 8.1e-177
Identity = 303/612 (49.51%), Postives = 423/612 (69.12%), Query Frame = 1 

Query: 36   LCDDLPDDEVFFTEVMEPWTMYFDDAAR---------RSGAGAGIVHISPEKHMLPYSFA 95
            L  +LPD+E+F  E+ E W +YFD A+R         R  AGAG+V  +P+  ++ +SF+
Sbjct: 2264 LIANLPDEEIFTAELQEQWELYFDGASRKDINPDGTPRRRAGAGLVFKTPQGGVIYHSFS 2323

Query: 96   L-SELCSNNVAEYQALIIGLQIALEIGVSFIEVYGDSKLIINQLSLQYDVKHEDLKPYFA 155
            L  E CSNN AEY+ALI GL +AL + V  +  +GDS+LII Q++  Y+V+  +L PY+ 
Sbjct: 2324 LLKEECSNNEAEYEALIFGLLLALSMEVRSLRAHGDSRLIIRQINNIYEVRKPELVPYYT 2383

Query: 156  YARQLMEKFDNVMLEHVPRVENKRADALANLATALTMPDDVTLNIPLCQRWIIPPVRPEC 215
             AR+LM+KF+++ + HVPR +N  ADALA LA AL    D    I + +RW++P V    
Sbjct: 2384 VARRLMDKFEHIEVIHVPRSKNAPADALAKLAAALVFQGDNPAQIVVEERWLLPAVLELI 2443

Query: 216  -QEVNIATSYLIDEEDWRQPIIEYLEHGKLPKDSRHKIEIRRRAAHFIYYKGTLYRRSL- 275
             +EVNI  +   +EEDWRQP ++Y +HG LP+D   + +++RR   +IY  G LY+RS  
Sbjct: 2444 PEEVNIIITNSAEEEDWRQPFLDYFKHGSLPEDPVERRQLQRRLPSYIYKAGVLYKRSYG 2503

Query: 276  EGLFLRCLGKEDSVKALKEVHAGVCGAHQSGPKLQFQLRRMGYYWPKMIQDSIDYVKKCE 335
            + + LRC+ + ++ + L+EVH GVCG HQSGPK+   +R +GYYWP ++ D +   K C 
Sbjct: 2504 QEVLLRCVDRSEANRVLQEVHHGVCGGHQSGPKMYHSIRLVGYYWPGIMADCLKTAKTCH 2563

Query: 336  PCQYHANFIHQPPEPLHPTVASWPFEAWGLDLVGPITPKSSAGHSYILAATDYFSRWAEA 395
             CQ H NF HQPP PLHPTV SWPF+AWG+D++G I P SS GH +IL ATDYFS+WAEA
Sbjct: 2564 GCQIHDNFKHQPPAPLHPTVPSWPFDAWGIDVIGLINPPSSRGHRFILTATDYFSKWAEA 2623

Query: 396  ISLREAKKENVADFIRTHIIYRYGIPHRIVTDNGKQFSNSMMDKLCEKFKFKQYKSSMYN 455
            + LRE K  +V +F+  HIIYR+G+PHRI +DN K F +  + +  EK+K K   S+ Y 
Sbjct: 2624 VPLREVKSSDVINFLERHIIYRFGVPHRITSDNAKAFKSQKIYRFMEKYKIKWNYSTGYY 2683

Query: 456  AAANGLAEAFNKTLCNLLKKIVSKSKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVE 515
              ANG+AEAFNKTL  +LKK V K +RDW +++ EALWAYR T RTPT  TPYSLVYG E
Sbjct: 2684 PQANGMAEAFNKTLGKILKKTVDKHRRDWHDRLYEALWAYRVTVRTPTQATPYSLVYGNE 2743

Query: 516  DVLPLEREIPSLRMAVQEGLTTEDNVKLRLQELEALDEKRLEAQQALECYQARMSKAFDK 575
             VLPLE ++PSLR+A+ + LT ++ ++LR QEL+A++E+RL A Q LE Y+  M +A+DK
Sbjct: 2744 AVLPLEIQLPSLRVAIHDELTKDEQIRLRFQELDAVEEERLGALQNLELYRQNMVRAYDK 2803

Query: 576  HVKPRSFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVYTNGAYKIVDQDGLR-I 635
             VK R F+ G+LVL +RRPI+ T     KF PKW+GPY++++ Y  GAY+++D  G + +
Sbjct: 2804 LVKQRVFRKGELVLVLRRPIVVTHKMKGKFEPKWEGPYVIEQAYDGGAYQLIDHQGSQPM 2863

[Close]
BLAST of CSPI06G13630 vs. TrEMBL
Match: Q2AA19_ASPOF (RNase H family protein OS=Asparagus officinalis GN=20.t00014 PE=4 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 1.4e-165
Identity = 309/643 (48.06%), Postives = 415/643 (64.54%), Query Frame = 1 

Query: 10   QELEDSLTSEVDHPRRCVLHYSPIEKLCDDLPDDEV---FFTEVMEPWTMYFDDAARRSG 69
            Q L D L    DHP       S   KL ++LPD+        E  + W ++FD A+R + 
Sbjct: 588  QALADFLA---DHP------VSGASKLYEELPDEVTKACATQEATQVWKLFFDGASRANP 647

Query: 70   AGA-----GIVHISPEKHMLPYSFALSELCSNNVAEYQALIIGLQIALEIGVSFIEVYGD 129
             GA     G+V ISP  H++P  F+L E C+NNVAEY AL++G+Q+A E+ +  +E YGD
Sbjct: 648  HGAITARVGVVLISPNGHVIPRGFSLIEPCTNNVAEYNALLMGMQLAEELNIQHLEAYGD 707

Query: 130  SKLIINQLSLQYDVKHEDLKPYFAYARQLMEKFDNVMLEHVPRVENKRADALANLATALT 189
            S+LI+NQ+  +Y+V+HEDL PY+    +  +KF+   +E++PR +N  ADALA+LAT+L 
Sbjct: 708  SQLIVNQVQGEYEVRHEDLIPYYFAVLKQAQKFECFFIEYIPRAQNAYADALASLATSLA 767

Query: 190  MPDDVTLNIP-----LCQRWIIPPVRPE--CQEVNIATSYLIDEEDWRQPIIEYLEHGKL 249
            +P  V   IP     LC   I     P+    E    TS   +  DWR P I+Y  +G L
Sbjct: 768  LPPGVETTIPVAGWKLCSSKIPMKENPDETTSEEVCTTSMEFESRDWRFPYIDYAVYGIL 827

Query: 250  PKDSRHKIEIRRRAAHFIY--YKGTLYRRSLEGLFLRCLGKEDSVKALKEVHAGVCGAHQ 309
            P D +    I+R+A  F Y      LYR+S +G+ LRCL ++++ +ALKE H   CGAHQ
Sbjct: 828  PDDPKEAASIKRKALRFYYDAVSQVLYRKSHDGILLRCLSRKEAKEALKEAHGVKCGAHQ 887

Query: 310  SGPKLQFQLRRMGYYWPKMIQDSIDYVKKCEPCQYHANFIHQPPEPLHPTVASWPFEAWG 369
             G KL  +LRR+GYYWPKM  D++DY K+C  CQ H +FIHQ P  LHPT A+WPFE WG
Sbjct: 888  PGAKLGDRLRRIGYYWPKMFSDAVDYAKRCHACQIHGDFIHQAPGNLHPTSATWPFEMWG 947

Query: 370  LDLVGPITPKSSAGHSYILAATDYFSRWAEAISLREAKKENVADFIRTHIIYRYGIPHRI 429
            +D+VGPI+P +S GH +ILA TDYFS+WAEAI      KE                   +
Sbjct: 948  MDIVGPISPPTSKGHRFILAVTDYFSKWAEAIP----LKE-------------------V 1007

Query: 430  VTDNGKQFSNSMMDKLCEKFKFKQYKSSMYNAAANGLAEAFNKTLCNLLKKIVSKSKRDW 489
             T N          + C+KF+ +   S+ Y   ANGLAEAFNKT+  LLKK VSKS+RDW
Sbjct: 1008 KTSN----------RFCDKFRIQSVASTAYYPPANGLAEAFNKTIVKLLKKFVSKSRRDW 1067

Query: 490  QEKIGEALWAYRTTHRTPTGVTPYSLVYGVEDVLPLEREIPSLRMAVQEGLTTEDNVKLR 549
             E++GE LWAYRTT RT T  TP+SLVYG E VLPLE +IPSLR+A+  GLT E+  + R
Sbjct: 1068 DERLGECLWAYRTTVRTSTRATPFSLVYGCEAVLPLEIQIPSLRVAITTGLTEEEKHQRR 1127

Query: 550  LQELEALDEKRLEAQQALECYQARMSKAFDKHVKPRSFQVGDLVLAVRRPIITTRHTGNK 609
            LQELEALD+KRL+AQQ +E YQAR+SKA++K VK R F+ GDLVLA +RP++ T  T  K
Sbjct: 1128 LQELEALDDKRLQAQQQIELYQARISKAYNKKVKERIFKKGDLVLANKRPMVMTHKTRGK 1187

Query: 610  FTPKWDGPYIVKEVYTNGAYKIVDQDGLRI-GPINGKFLKKFY 635
            F PKW+GP++++ VY+NGAY++++Q+G R+  PINGKFLK+++
Sbjct: 1188 FNPKWEGPFVIESVYSNGAYRLINQEGDRLMMPINGKFLKRYF 1188

[Close]
BLAST of CSPI06G13630 vs. TrEMBL
Match: Q10I89_ORYSJ (Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica GN=LOC_Os03g36220 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 4.2e-149
Identity = 266/545 (48.81%), Postives = 364/545 (66.79%), Query Frame = 1 

Query: 36   LCDDLPDDEVFFTEVMEPWTMYFDDAAR---------RSGAGAGIVHISPEKHMLPYSFA 95
            L  +LPD++VF  E    W + FD A+R         R  AGAG+V  +P+  ++ +SF+
Sbjct: 725  LITELPDEDVFTIETEPSWELCFDGASRTENDRDGTPRKRAGAGLVFKTPQGGVIYHSFS 784

Query: 96   L-SELCSNNVAEYQALIIGLQIALEIGVSFIEVYGDSKLIINQLSLQYDVKHEDLKPYFA 155
            L  E CSNN AEY+ALI GL +AL + V  I VYGDS+LI+ Q++  Y+V  ++L PY++
Sbjct: 785  LLKEECSNNEAEYEALIFGLLLALSMEVRSIRVYGDSQLIVQQINDIYEVLKQELVPYYS 844

Query: 156  YARQLMEKFDNVMLEHVPRVENKRADALANLATALTMPDDVTLNIPLCQRWIIPPVR--- 215
             AR+LME F ++ + HVPR  N  ADALA LA AL +P      + + +RW++P V    
Sbjct: 845  AARRLMEMFGHIEVMHVPRSRNAPADALAKLAAALVLPQGGPTQVNVEERWLLPAVLELL 904

Query: 216  PECQEVNIATSYLIDEEDWRQPIIEYLEHGKLPKDSRHKIEIRRRAAHFIYYKGTLYRRS 275
            P   EV+   +    E+DWR P + Y  HG LP +S  + +++RR   ++Y  G  YRRS
Sbjct: 905  PNEYEVDTVMAAAAKEDDWRVPFLNYFRHGSLPDNSVERRQLQRRLPSYVYKSGVSYRRS 964

Query: 276  L-EGLFLRCLGKEDSVKALKEVHAGVCGAHQSGPKLQFQLRRMGYYWPKMIQDSIDYVKK 335
              + + LRC+ + ++ KAL+EVH GVCG HQSGPK+   +R  GYYWP+++ D +   K 
Sbjct: 965  YGQEVLLRCVDRLEADKALQEVHHGVCGGHQSGPKMYHSIRLAGYYWPEIMADCLKVAKS 1024

Query: 336  CEPCQYHANFIHQPPEPLHPTVASWPFEAWGLDLVGPITPKSSAGHSYILAATDYFSRWA 395
            C  CQ H +F H PP PLHPTV +WPFEAWG+D++GPI P SS GH +I A TDYFS+WA
Sbjct: 1025 CHGCQIHGDFKHLPPVPLHPTVPAWPFEAWGIDVIGPIDPPSSRGHRFIFAITDYFSKWA 1084

Query: 396  EAISLREAKKENVADFIRTHIIYRYGIPHRIVTDNGKQFSNSMMDKLCEKFKFKQYKSSM 455
            EA+SLRE K +NV  F+  HIIYR+G+PHRI +DNGK F +  M +   K+K +   S+ 
Sbjct: 1085 EAVSLREVKTDNVISFLERHIIYRFGVPHRISSDNGKAFKSHKMQRFIAKYKIRWNYSTG 1144

Query: 456  YNAAANGLAEAFNKTLCNLLKKIVSKSKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYG 515
            Y   ANG+ EAFNKTL  +LKK+V++ +RDW + + EALWAYR T RTPT  TPYSLVYG
Sbjct: 1145 YYPQANGMIEAFNKTLGKILKKVVNRHRRDWHDHLFEALWAYRVTVRTPTQCTPYSLVYG 1204

Query: 516  VEDVLPLEREIPSLRMAVQEGLTTEDNVKLRLQELEALDEKRLEAQQALECYQARMSKAF 567
             E VLPLE E+PSLR+A+ E +T ++ V+LR QEL+ L+E RL+A Q LE Y+  M +A+
Sbjct: 1205 SEAVLPLEVEVPSLRVAIHEEITQDEQVRLRFQELDTLEEGRLQAVQNLELYRQNMVRAY 1264

[Close]
BLAST of CSPI06G13630 vs. TrEMBL
Match: Q93Y69_ORYSJ (Putative gag-pol OS=Oryza sativa subsp. japonica GN=OSJNBb0031G04.9 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 4.2e-149
Identity = 266/545 (48.81%), Postives = 364/545 (66.79%), Query Frame = 1 

Query: 36   LCDDLPDDEVFFTEVMEPWTMYFDDAAR---------RSGAGAGIVHISPEKHMLPYSFA 95
            L  +LPD++VF  E    W + FD A+R         R  AGAG+V  +P+  ++ +SF+
Sbjct: 718  LITELPDEDVFTIETEPSWELCFDGASRTENDRDGTPRKRAGAGLVFKTPQGGVIYHSFS 777

Query: 96   L-SELCSNNVAEYQALIIGLQIALEIGVSFIEVYGDSKLIINQLSLQYDVKHEDLKPYFA 155
            L  E CSNN AEY+ALI GL +AL + V  I VYGDS+LI+ Q++  Y+V  ++L PY++
Sbjct: 778  LLKEECSNNEAEYEALIFGLLLALSMEVRSIRVYGDSQLIVQQINDIYEVLKQELVPYYS 837

Query: 156  YARQLMEKFDNVMLEHVPRVENKRADALANLATALTMPDDVTLNIPLCQRWIIPPVR--- 215
             AR+LME F ++ + HVPR  N  ADALA LA AL +P      + + +RW++P V    
Sbjct: 838  AARRLMEMFGHIEVMHVPRSRNAPADALAKLAAALVLPQGGPTQVNVEERWLLPAVLELL 897

Query: 216  PECQEVNIATSYLIDEEDWRQPIIEYLEHGKLPKDSRHKIEIRRRAAHFIYYKGTLYRRS 275
            P   EV+   +    E+DWR P + Y  HG LP +S  + +++RR   ++Y  G  YRRS
Sbjct: 898  PNEYEVDTVMAAAAKEDDWRVPFLNYFRHGSLPDNSVERRQLQRRLPSYVYKSGVSYRRS 957

Query: 276  L-EGLFLRCLGKEDSVKALKEVHAGVCGAHQSGPKLQFQLRRMGYYWPKMIQDSIDYVKK 335
              + + LRC+ + ++ KAL+EVH GVCG HQSGPK+   +R  GYYWP+++ D +   K 
Sbjct: 958  YGQEVLLRCVDRLEADKALQEVHHGVCGGHQSGPKMYHSIRLAGYYWPEIMADCLKVAKS 1017

Query: 336  CEPCQYHANFIHQPPEPLHPTVASWPFEAWGLDLVGPITPKSSAGHSYILAATDYFSRWA 395
            C  CQ H +F H PP PLHPTV +WPFEAWG+D++GPI P SS GH +I A TDYFS+WA
Sbjct: 1018 CHGCQIHGDFKHLPPVPLHPTVPAWPFEAWGIDVIGPIDPPSSRGHRFIFAITDYFSKWA 1077

Query: 396  EAISLREAKKENVADFIRTHIIYRYGIPHRIVTDNGKQFSNSMMDKLCEKFKFKQYKSSM 455
            EA+SLRE K +NV  F+  HIIYR+G+PHRI +DNGK F +  M +   K+K +   S+ 
Sbjct: 1078 EAVSLREVKTDNVISFLERHIIYRFGVPHRISSDNGKAFKSHKMQRFIAKYKIRWNYSTG 1137

Query: 456  YNAAANGLAEAFNKTLCNLLKKIVSKSKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYG 515
            Y   ANG+ EAFNKTL  +LKK+V++ +RDW + + EALWAYR T RTPT  TPYSLVYG
Sbjct: 1138 YYPQANGMIEAFNKTLGKILKKVVNRHRRDWHDHLFEALWAYRVTVRTPTQCTPYSLVYG 1197

Query: 516  VEDVLPLEREIPSLRMAVQEGLTTEDNVKLRLQELEALDEKRLEAQQALECYQARMSKAF 567
             E VLPLE E+PSLR+A+ E +T ++ V+LR QEL+ L+E RL+A Q LE Y+  M +A+
Sbjct: 1198 SEAVLPLEVEVPSLRVAIHEEITQDEQVRLRFQELDTLEEGRLQAVQNLELYRQNMVRAY 1257

[Close]
BLAST of CSPI06G13630 vs. TrEMBL
Match: A5B6Y5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008801 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 1.4e-136
Identity = 258/622 (41.48%), Postives = 367/622 (59.00%), Query Frame = 1 

Query: 28   LHYSPIEKLCDDLPDDEVFFTEVMEPWTMYFDDAARRSGAGAGIVHISPEKHMLPYSFAL 87
            L  S    + DD PD++V     +  W MYFD AA  SG G G++ ISP    +P S  L
Sbjct: 1713 LPVSDARAIDDDFPDEDVAAVTSLSGWRMYFDGAANHSGYGIGVLLISPHGDHIPRSVRL 1772

Query: 88   S----ELCSNNVAEYQALIIGLQIALEIGVSFIEVYGDSKLIINQLSLQYDVKHEDLKPY 147
            +       +NN+ EY+A I+GL+ ALE+G+  +EV+GDS L++ Q+  ++  +   LKPY
Sbjct: 1773 AFSDRHPATNNIVEYEACILGLETALELGIGQMEVFGDSNLVLRQIQGEWKTRDVKLKPY 1832

Query: 148  FAYARQLMEKFDNVMLEHVPRVENKRADALANLATALTMPDDVTLNIPLCQRWIIPPVRP 207
             AY   L+ +FD++   H+PR +N+ ADALA LA+ + +P D T             VRP
Sbjct: 1833 HAYLELLVGRFDDLRYTHLPRAQNQFADALATLASMIDIPVDAT-------------VRP 1892

Query: 208  ECQEVNIATSY--LIDEED------WRQPIIEYLEHGKLPK--DSRHKIEIRRRAAHFIY 267
               E   A +Y  LID+ +      W   I  +L  G  P+   ++ K  +R+ A  F+ 
Sbjct: 1893 LLIESRSAPAYCCLIDDAEPDDGLPWYHDIYHFLRLGVYPEAATAKDKRALRQLATRFVI 1952

Query: 268  YKGTLYRRSLEGLFLRCLGKEDSVKALKEVHAGVCGAHQSGPKLQFQLRRMGYYWPKMIQ 327
            Y  TLYRRS +G+ L CL    + + ++EVHAGVCG H  G  L  ++ R GY+W  M  
Sbjct: 1953 YGETLYRRSPDGMLLLCLDXTSADRVMREVHAGVCGPHMGGHMLARKIMRTGYFWLTMET 2012

Query: 328  DSIDYVKKCEPCQYHANFIHQPPEPLHPTVASWPFEAWGLDLVGPITPKSSAGHSYILAA 387
            D   +V++C  CQ H + IH PP  LH   + WPF  WG+D++G I+PKSS+GH +IL A
Sbjct: 2013 DCCQFVQRCPECQIHGDLIHVPPSELHALTSPWPFSVWGIDIIGKISPKSSSGHEFILVA 2072

Query: 388  TDYFSRWAEAISLREAKKENVADFIRTHIIYRYGIPHRIVTDNGKQFSNSMMDKLCEKFK 447
             DYF++W EA S        VA FIR+HII RYG+PH +++D G  F  + +D L +++ 
Sbjct: 2073 IDYFTKWVEAASYARLTSAGVASFIRSHIICRYGVPHELISDRGVHF-RAEVDTLVQRYS 2132

Query: 448  FKQYKSSMYNAAANGLAEAFNKTLCNLLKKIVSKSKRDWQEKIGEALWAYRTTHRTPTGV 507
             + ++SS Y    NG  EA NK +  +L+++V  S RDW EK+  ALWAYRT+ RT TG 
Sbjct: 2133 IRHHRSSAYRPQTNGAVEAANKNIKRILRRMVETS-RDWSEKLPFALWAYRTSFRTSTGA 2192

Query: 508  TPYSLVYGVEDVLPLEREIPSLRMAVQEGLTTEDNVKLRLQELEALDEKRLEAQQALECY 567
            TPYSLVYG+E +LP+E E+ SLR+A+++ +   D  + R  +L  LDE+RL A   +  Y
Sbjct: 2193 TPYSLVYGMEAMLPVEIEMGSLRVALEQQIPEADRAQARFDQLNLLDERRLRAADHVRAY 2252

Query: 568  QARMSKAFDKHVKPRSFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVYTNGAYK 627
            Q +M++AF K VKPR   VGDLVL V R +I  R    KF P W GPY ++E+   GA  
Sbjct: 2253 QRKMARAFKKRVKPRPLHVGDLVLKVIRGLI--RDPRGKFRPNWSGPYFIRELTPEGAAW 2312

Query: 628  IVDQDGLRIG-PINGKFLKKFY 635
            ++D DG R   P N   LK++Y
Sbjct: 2313 LMDLDGNRFSEPTNVDQLKRYY 2317

[Close]
BLAST of CSPI06G13630 vs. TAIR10
Match: AT1G24090.1 (AT1G24090.1 RNase H family protein)

HSP 1 Score: 73.2 bits (178), Expect = 6.6e-13
Identity = 62/181 (34.25%), Postives = 84/181 (46.41%), Query Frame = 1 

Query: 13  EDSLTSEV-------DHPRRCVLHYSPIEKLCDDLPD----DEVFFTEVMEPWTMYFDDA 72
           ED  TSE        D      + Y P+EKL    P     DE  F E        FD A
Sbjct: 173 EDETTSETKSKDDKKDQLPSASISYDPLEKLSKVEPSAYISDETCFIE--------FDGA 232

Query: 73  ARRSG--AGAGIVHISPEKHMLPYSFALSELCSNNVAEYQALIIGLQIALEIGVSFIEVY 132
           ++ +   +GA  V  + +  ++        + +NN AEY ALI+GL+ A+E G   I+V 
Sbjct: 233 SKGNPGLSGAAAVLKTEDGSLICRVRQGLGIATNNAAEYHALILGLKYAIEKGYKNIKVK 292

Query: 133 GDSKLIINQLSLQYDVKHEDLKPYFAYARQLMEKFDNVMLEHVPRVENKRADALANLATA 181
           GDSKL+  Q+  Q+ V HE L      A+ L  K  +  + HV R  N  AD  ANLA  
Sbjct: 293 GDSKLVCMQIKGQWKVNHEVLAKLHKEAKLLCNKCVSFEISHVLRNLNADADEQANLAVR 345

[Close]
BLAST of CSPI06G13630 vs. TAIR10
Match: AT3G01410.1 (AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 69.3 bits (168), Expect = 9.6e-12
Identity = 44/128 (34.38%), Postives = 68/128 (53.12%), Query Frame = 1 

Query: 55  TMYFDDAARRSG--AGAGIVHISPEKHMLPYSFALSELCSNNVAEYQALIIGLQIALEIG 114
           T+ FD A++ +   AGAG V  + +  +L Y        +NNVAEY+AL++GL+ AL+ G
Sbjct: 156 TIEFDGASKGNPGKAGAGAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLRSALDKG 215

Query: 115 VSFIEVYGDSKLIINQLSLQYDVKHEDLKPYFAYARQLMEKFDNVMLEHVPRVENKRADA 174
              + V GDS L+  Q+   +   H  +      A++LM  F    ++H+ R +N  AD 
Sbjct: 216 FKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSEADK 275

Query: 175 LANLATAL 181
            AN A  L
Sbjct: 276 QANSAIFL 283

[Close]
BLAST of CSPI06G13630 vs. TAIR10
Match: AT5G51080.1 (AT5G51080.1 RNase H family protein)

HSP 1 Score: 65.1 bits (157), Expect = 1.8e-10
Identity = 38/92 (41.30%), Postives = 54/92 (58.70%), Query Frame = 1 

Query: 90  LCSNNVAEYQALIIGLQIALEIGVSFIEVYGDSKLIINQLSLQYDVKHEDLKPYFAYARQ 149
           + +NN AEY  LI+GL+ A+E G + I+V  DSKL+  Q+  Q+ V HE L      A+Q
Sbjct: 224 IATNNAAEYHGLILGLKHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQ 283

Query: 150 LMEKFDNVMLEHVPRVENKRADALANLATALT 182
           L +K  +  + HV R  N  AD  AN+A  L+
Sbjct: 284 LSDKCLSFEISHVLRSLNSDADEQANMAARLS 315

[Close]
BLAST of CSPI06G13630 vs. NCBI nr
Match: gi|778660504|ref|XP_011656345.1| (PREDICTED: uncharacterized protein LOC105435721 isoform X1 [Cucumis sativus])

HSP 1 Score: 1224.5 bits (3167), Expect = 0.0e+00
Identity = 596/601 (99.17%), Postives = 598/601 (99.50%), Query Frame = 1 

Query: 35   KLCDDLPDDEVFFTEVMEPWTMYFDDAARRSGAGAGIVHISPEKHMLPYSFALSELCSNN 94
            KLCDDLPDDEVFFTEVMEPWTMYFD AARRSGAGAGIV ISPEKHMLPYSFALSELCSNN
Sbjct: 1308 KLCDDLPDDEVFFTEVMEPWTMYFDGAARRSGAGAGIVLISPEKHMLPYSFALSELCSNN 1367

Query: 95   VAEYQALIIGLQIALEIGVSFIEVYGDSKLIINQLSLQYDVKHEDLKPYFAYARQLMEKF 154
            VAEYQALIIGLQIALEIGVSFIEVYGDSKLIINQLSLQYDVKHEDLKPYFAYARQLMEKF
Sbjct: 1368 VAEYQALIIGLQIALEIGVSFIEVYGDSKLIINQLSLQYDVKHEDLKPYFAYARQLMEKF 1427

Query: 155  DNVMLEHVPRVENKRADALANLATALTMPDDVTLNIPLCQRWIIPPVRPECQEVNIATSY 214
            DNVMLEHVPRVENKRADALANLATALTMPDDVTLNIPLCQRWIIPPVRPECQEVN+ATSY
Sbjct: 1428 DNVMLEHVPRVENKRADALANLATALTMPDDVTLNIPLCQRWIIPPVRPECQEVNMATSY 1487

Query: 215  LIDEEDWRQPIIEYLEHGKLPKDSRHKIEIRRRAAHFIYYKGTLYRRSLEGLFLRCLGKE 274
            LIDEEDWRQPIIEYLEHGKLPKDSRHKIEIRRRAAHFIYYKGTLYRRSLEGLFLRCLGKE
Sbjct: 1488 LIDEEDWRQPIIEYLEHGKLPKDSRHKIEIRRRAAHFIYYKGTLYRRSLEGLFLRCLGKE 1547

Query: 275  DSVKALKEVHAGVCGAHQSGPKLQFQLRRMGYYWPKMIQDSIDYVKKCEPCQYHANFIHQ 334
            DSVKALKEVHAGVCGAHQSGPKLQFQLRRMGYYWPKMIQDSIDYVKKCEPCQYHANFIHQ
Sbjct: 1548 DSVKALKEVHAGVCGAHQSGPKLQFQLRRMGYYWPKMIQDSIDYVKKCEPCQYHANFIHQ 1607

Query: 335  PPEPLHPTVASWPFEAWGLDLVGPITPKSSAGHSYILAATDYFSRWAEAISLREAKKENV 394
            PPEPLHPTVASWPFEAWGLDLVGPITPKSSAGHSYILAATDYFS+WAEAISLREAKKENV
Sbjct: 1608 PPEPLHPTVASWPFEAWGLDLVGPITPKSSAGHSYILAATDYFSKWAEAISLREAKKENV 1667

Query: 395  ADFIRTHIIYRYGIPHRIVTDNGKQFSNSMMDKLCEKFKFKQYKSSMYNAAANGLAEAFN 454
            ADFIRTHIIYRYGIPHRIVTDNGKQFSNSMMDKLCEKFKFKQYKSSMYNAAANGLAEAFN
Sbjct: 1668 ADFIRTHIIYRYGIPHRIVTDNGKQFSNSMMDKLCEKFKFKQYKSSMYNAAANGLAEAFN 1727

Query: 455  KTLCNLLKKIVSKSKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEDVLPLEREIPS 514
            KTLCNLLKKIVSKSKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVE VLPLEREIPS
Sbjct: 1728 KTLCNLLKKIVSKSKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVLPLEREIPS 1787

Query: 515  LRMAVQEGLTTEDNVKLRLQELEALDEKRLEAQQALECYQARMSKAFDKHVKPRSFQVGD 574
            LRMAVQEGLTTEDNVKLRLQELEALDEKRLEAQQALECYQARMSKAFDKHVKPRSFQVGD
Sbjct: 1788 LRMAVQEGLTTEDNVKLRLQELEALDEKRLEAQQALECYQARMSKAFDKHVKPRSFQVGD 1847

Query: 575  LVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVYTNGAYKIVDQDGLRIGPINGKFLKKFY 634
            LVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVYTNGAYKIVDQDGLRIGPINGKFLKKFY
Sbjct: 1848 LVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVYTNGAYKIVDQDGLRIGPINGKFLKKFY 1907

Query: 635  A 636
            A
Sbjct: 1908 A 1908

[Close]
BLAST of CSPI06G13630 vs. NCBI nr
Match: gi|731333386|ref|XP_010677706.1| (PREDICTED: uncharacterized protein LOC104893305 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 884.4 bits (2284), Expect = 1.2e-253
Identity = 408/608 (67.11%), Postives = 503/608 (82.73%), Query Frame = 1 

Query: 29   HYSPIE-KLCDDLPDDEVFFTEVMEPWTMYFDDAARRSGAGAGIVHISPEKHMLPYSFAL 88
            H +P + +L DDLP +EVF+ +++ PW MYFD AAR+ GAGAG++ ISPEKH+L YSF L
Sbjct: 665  HPTPSDWELSDDLPGEEVFYIDILPPWEMYFDGAARQDGAGAGVILISPEKHILTYSFVL 724

Query: 89   SELCSNNVAEYQALIIGLQIALEIGVSFIEVYGDSKLIINQLSLQYDVKHEDLKPYFAYA 148
            +ELCSNNVAEYQALI GLQ+A E+ +  ++VYGD KL+I+QL   YDVK E+L PY  +A
Sbjct: 725  TELCSNNVAEYQALIFGLQMAKEMEIQDLDVYGDFKLVIHQLLDDYDVKKENLIPYHKHA 784

Query: 149  RQLMEKFDNVMLEHVPRVENKRADALANLATALTMPDDVTLNIPLCQRWIIPPVRPECQE 208
             QL+  FD+V L+HVPR  NK ADALANLA  L +  + ++++P+C RW++ P+    +E
Sbjct: 785  SQLLGTFDSVKLQHVPRSANKMADALANLAATLALGAEESMSVPVCNRWVVTPLEDGIEE 844

Query: 209  -VNIATSYLIDEEDWRQPIIEYLEHGKLPKDSRHKIEIRRRAAHFIYYKGTLYRRSLEGL 268
              N  + Y ++  DWRQP+I+YLEHGKLP+D +HK EIRRRA  FIYYKGTLYRRS  G 
Sbjct: 845  GANAVSVYEVNVNDWRQPLIDYLEHGKLPRDPKHKTEIRRRAPRFIYYKGTLYRRSFLGT 904

Query: 269  FLRCLGKEDSVKALKEVHAGVCGAHQSGPKLQFQLRRMGYYWPKMIQDSIDYVKKCEPCQ 328
            +LRCLG E+++K L+E H+GVCGAHQ GPKL  +++R+GY+WP M+QDS++Y K+CE CQ
Sbjct: 905  WLRCLGDEEAIKTLEEAHSGVCGAHQVGPKLHDRIKRLGYFWPTMVQDSMEYAKRCEACQ 964

Query: 329  YHANFIHQPPEPLHPTVASWPFEAWGLDLVGPITPKSSAGHSYILAATDYFSRWAEAISL 388
            YH+NFIHQPPEPLHPTV SWPFEAWGLD+VGPITPKSSAGH+YILA+TDYFS+WAEA++L
Sbjct: 965  YHSNFIHQPPEPLHPTVTSWPFEAWGLDVVGPITPKSSAGHAYILASTDYFSKWAEAVTL 1024

Query: 389  REAKKENVADFIRTHIIYRYGIPHRIVTDNGKQFSNSMMDKLCEKFKFKQYKSSMYNAAA 448
            RE KKENV DF+R +IIYRYG+P  I+TDNG  F N ++  LCEKFKF Q KSSMYNA A
Sbjct: 1025 REVKKENVVDFVRNYIIYRYGVPRYIITDNGTPFCNRLLTSLCEKFKFAQRKSSMYNAPA 1084

Query: 449  NGLAEAFNKTLCNLLKKIVSKSKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEDVL 508
            NGLAEAFNKTLC LL K+VSK KRDW EK+GEALWAYRTT++TPT  TPY+LVYGVE VL
Sbjct: 1085 NGLAEAFNKTLCTLLSKVVSKHKRDWHEKLGEALWAYRTTYKTPTQSTPYALVYGVESVL 1144

Query: 509  PLEREIPSLRMAVQEGLTTEDNVKLRLQELEALDEKRLEAQQALECYQARMSKAFDKHVK 568
            PLE ++PSLR+A+QE LT E+N K+RL ELEALDEKRLE QQ LECYQAR+++AF+K V+
Sbjct: 1145 PLEIQVPSLRIAIQEDLTVEENAKIRLAELEALDEKRLEVQQKLECYQARLTRAFNKKVR 1204

Query: 569  PRSFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVYTNGAYKIVDQDGLRIGPIN 628
             RSFQVGD+VLAV+RPII +R TG+KF  KWDGPY+V+EVYTNGAYKIVD DGLRIGPIN
Sbjct: 1205 VRSFQVGDMVLAVKRPIIVSRKTGSKFDSKWDGPYVVQEVYTNGAYKIVDADGLRIGPIN 1264

Query: 629  GKFLKKFY 635
            GKFLK++Y
Sbjct: 1265 GKFLKRYY 1272

[Close]
BLAST of CSPI06G13630 vs. NCBI nr
Match: gi|848907694|ref|XP_012852915.1| (PREDICTED: uncharacterized protein LOC105972499 [Erythranthe guttata])

HSP 1 Score: 871.3 bits (2250), Expect = 1.0e-249
Identity = 408/612 (66.67%), Postives = 508/612 (83.01%), Query Frame = 1 

Query: 29   HYSPIE-KLCDDLPDDEVFFTEVMEPWTMYFDDAARRSGAGAGIVHISPEKHMLPYSFAL 88
            H  P E +L DDLPD++V   E    W MYFD A+ R GAGAG+V ++    +LP+SF L
Sbjct: 1534 HPIPAEWELSDDLPDEDVLVIEASPHWKMYFDGASHREGAGAGVVFVTSNGEVLPHSFTL 1593

Query: 89   SELCSNNVAEYQALIIGLQIALEIGVSFIEVYGDSKLIINQLSLQYDVKHEDLKPYFAYA 148
            ++ CSNNVAEYQALI+GL++A++I    +EVYGDSKL+INQ+   Y+VK  DL PY  YA
Sbjct: 1594 TQNCSNNVAEYQALILGLEMAVDIKQLNLEVYGDSKLVINQILGSYEVKKLDLLPYVDYA 1653

Query: 149  RQLMEKFDNVMLEHVPRVENKRADALANLATALTMPDDVTLNIPLCQRWIIPPV----RP 208
            ++L+    +VM+EHVPR +NK+ADALA LA+ L MP+D    I + +RW++PP+      
Sbjct: 1654 KRLIGYLGDVMIEHVPRKDNKQADALAKLASTLAMPEDGA-RISIFKRWVVPPIFEHEEI 1713

Query: 209  ECQEVNIATSYLIDEEDWRQPIIEYLEHGKLPKDSRHKIEIRRRAAHFIYYKGTLYRRSL 268
            E  E  +   + I++EDWRQ  ++YL++ KLP D R +++IRRRAA FIYYK TLYRRS 
Sbjct: 1714 EEDETRVVYVFEIEKEDWRQSFVDYLKYEKLPNDPRQRVDIRRRAARFIYYKDTLYRRSF 1773

Query: 269  EGLFLRCLGKEDSVKALKEVHAGVCGAHQSGPKLQFQLRRMGYYWPKMIQDSIDYVKKCE 328
            +G+FLRCLG +++V+A++E H+GVCGAHQSGPKL F+++RMGYYWP M++D ++Y +KC+
Sbjct: 1774 DGVFLRCLGDDEAVQAIEEAHSGVCGAHQSGPKLHFRIKRMGYYWPSMVKDCMEYAQKCQ 1833

Query: 329  PCQYHANFIHQPPEPLHPTVASWPFEAWGLDLVGPITPKSSAGHSYILAATDYFSRWAEA 388
            PCQ+HANFIHQPPEPLHPTVASWPF+AWGLD+VGP+T KSSAGH YILAATDYFS+WAEA
Sbjct: 1834 PCQFHANFIHQPPEPLHPTVASWPFDAWGLDVVGPMT-KSSAGHLYILAATDYFSKWAEA 1893

Query: 389  ISLREAKKENVADFIRTHIIYRYGIPHRIVTDNGKQFSNSMMDKLCEKFKFKQYKSSMYN 448
            + LRE KKENVADFIR +IIYRYG+P  ++TDNGK F NS++DKLCEKF FKQ KSSMYN
Sbjct: 1894 VPLREVKKENVADFIRINIIYRYGVPRYVITDNGKPFCNSVIDKLCEKFGFKQRKSSMYN 1953

Query: 449  AAANGLAEAFNKTLCNLLKKIVSKSKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVE 508
            AAANGLAEAFNKTLCNLLKK+++KSKRDW E++GEALWAYRTT+RTPT  TPY+LVYGVE
Sbjct: 1954 AAANGLAEAFNKTLCNLLKKVIAKSKRDWHERMGEALWAYRTTYRTPTQATPYALVYGVE 2013

Query: 509  DVLPLEREIPSLRMAVQEGLTTEDNVKLRLQELEALDEKRLEAQQALECYQARMSKAFDK 568
             VLPLE++IPSLR+A+QE LT E+N +LRL ELEALDEKRLEAQQ++ECYQAR+S+AF+K
Sbjct: 2014 AVLPLEKQIPSLRIAIQEELTQEENARLRLAELEALDEKRLEAQQSIECYQARLSRAFNK 2073

Query: 569  HVKPRSFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVYTNGAYKIVDQDGLRIG 628
             V+PRSFQ+GDLVLAVRRPII T  TGNKFT KWDGPY+VKE YTNGAYK+V +DGLRIG
Sbjct: 2074 KVRPRSFQIGDLVLAVRRPIIVTHKTGNKFTSKWDGPYVVKEAYTNGAYKLVAEDGLRIG 2133

Query: 629  PINGKFLKKFYA 636
            PINGKFLK++YA
Sbjct: 2134 PINGKFLKRYYA 2143

[Close]
BLAST of CSPI06G13630 vs. NCBI nr
Match: gi|848879042|ref|XP_012839926.1| (PREDICTED: uncharacterized protein LOC105960308 [Erythranthe guttata])

HSP 1 Score: 870.2 bits (2247), Expect = 2.3e-249
Identity = 409/612 (66.83%), Postives = 507/612 (82.84%), Query Frame = 1 

Query: 29   HYSPIE-KLCDDLPDDEVFFTEVMEPWTMYFDDAARRSGAGAGIVHISPEKHMLPYSFAL 88
            H  P E +LCDDLPD++V   E   PW MYFD A+ R GAGAG+V ++    +LP+SF L
Sbjct: 1534 HPIPAEWELCDDLPDEDVLVIEASPPWKMYFDGASHREGAGAGVVFVTSNGEVLPHSFTL 1593

Query: 89   SELCSNNVAEYQALIIGLQIALEIGVSFIEVYGDSKLIINQLSLQYDVKHEDLKPYFAYA 148
            ++ CSNNVAEYQALI+GL++A++I    +EVYGDSKL+INQ+   Y+VK  DL PY  YA
Sbjct: 1594 TQNCSNNVAEYQALILGLEMAVDIKQLNLEVYGDSKLVINQILGSYEVKKLDLLPYVDYA 1653

Query: 149  RQLMEKFDNVMLEHVPRVENKRADALANLATALTMPDDVTLNIPLCQRWIIPPV----RP 208
            ++L+    +VM+EHVPR +NK+ADALA LA+ L MP+D    I + +RW++PP+      
Sbjct: 1654 KRLIGYLGDVMIEHVPRKDNKQADALAKLASTLAMPEDGA-RISIFKRWVVPPIFEHEEI 1713

Query: 209  ECQEVNIATSYLIDEEDWRQPIIEYLEHGKLPKDSRHKIEIRRRAAHFIYYKGTLYRRSL 268
            E  E  +   + I++EDWRQ  ++YL++ KLP D R +++IRRRAA FIYYK TLYRRS 
Sbjct: 1714 EEDETRVVYVFEIEKEDWRQSFVDYLKYEKLPNDPRQRVDIRRRAARFIYYKDTLYRRSF 1773

Query: 269  EGLFLRCLGKEDSVKALKEVHAGVCGAHQSGPKLQFQLRRMGYYWPKMIQDSIDYVKKCE 328
            +G+FLRCLG +++V+A++E H+GVCGAHQSGPKL F+++RMGYYWP M++D ++Y +KC+
Sbjct: 1774 DGVFLRCLGDDEAVQAIEEAHSGVCGAHQSGPKLHFRIKRMGYYWPSMVKDCMEYAQKCQ 1833

Query: 329  PCQYHANFIHQPPEPLHPTVASWPFEAWGLDLVGPITPKSSAGHSYILAATDYFSRWAEA 388
            PCQ+HANFIHQPPEPLHPTVASWPF+AWGLD+VGP+T KSSAGH YILAATDYFS+WAEA
Sbjct: 1834 PCQFHANFIHQPPEPLHPTVASWPFDAWGLDVVGPMT-KSSAGHLYILAATDYFSKWAEA 1893

Query: 389  ISLREAKKENVADFIRTHIIYRYGIPHRIVTDNGKQFSNSMMDKLCEKFKFKQYKSSMYN 448
            + LRE KKENVADFIR +IIYRYG+P  ++TDNGK F NS++DKLCEKF FKQ KSSMYN
Sbjct: 1894 VPLREVKKENVADFIRINIIYRYGVPRYVITDNGKPFCNSVIDKLCEKFGFKQRKSSMYN 1953

Query: 449  AAANGLAEAFNKTLCNLLKKIVSKSKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVE 508
            AAANGLAEAFNKTLCNLLKK+++KSKRDW EK+GEAL AYRTT+RTPT  TPY+LVYGVE
Sbjct: 1954 AAANGLAEAFNKTLCNLLKKVIAKSKRDWHEKMGEALGAYRTTYRTPTQATPYALVYGVE 2013

Query: 509  DVLPLEREIPSLRMAVQEGLTTEDNVKLRLQELEALDEKRLEAQQALECYQARMSKAFDK 568
             VLPLE++IPSLR+A+QE LT E+N +LRL ELEALDEKRLEAQQ++ECYQAR+S+A +K
Sbjct: 2014 AVLPLEKQIPSLRIAIQEELTQEENARLRLAELEALDEKRLEAQQSIECYQARLSRAINK 2073

Query: 569  HVKPRSFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVYTNGAYKIVDQDGLRIG 628
             V+PRSFQVGDLVLAVRRPII T  TGNKFT KWDGPY+VK  YTNGAYK+V +DGLRIG
Sbjct: 2074 KVRPRSFQVGDLVLAVRRPIIVTHKTGNKFTSKWDGPYVVKVAYTNGAYKLVAEDGLRIG 2133

Query: 629  PINGKFLKKFYA 636
            PINGKFLK++YA
Sbjct: 2134 PINGKFLKRYYA 2143

[Close]
BLAST of CSPI06G13630 vs. NCBI nr
Match: gi|848907690|ref|XP_012852913.1| (PREDICTED: uncharacterized protein LOC105972498 [Erythranthe guttata])

HSP 1 Score: 863.6 bits (2230), Expect = 2.1e-247
Identity = 407/612 (66.50%), Postives = 505/612 (82.52%), Query Frame = 1 

Query: 29   HYSPIE-KLCDDLPDDEVFFTEVMEPWTMYFDDAARRSGAGAGIVHISPEKHMLPYSFAL 88
            H  P E +L DDLPD++V   E    W MYFD A+ R GAGAG+V ++    +LP+SF L
Sbjct: 1534 HPIPAEWELSDDLPDEDVLVIEASPHWKMYFDGASHREGAGAGVVFVTSNGEVLPHSFTL 1593

Query: 89   SELCSNNVAEYQALIIGLQIALEIGVSFIEVYGDSKLIINQLSLQYDVKHEDLKPYFAYA 148
            ++ CSNNVAEYQALI+GL++A++I    +EVYGDSKL+INQ+   Y+VK  DL PY  YA
Sbjct: 1594 TQNCSNNVAEYQALILGLEMAVDIKQLNLEVYGDSKLVINQILGSYEVKKLDLLPYVDYA 1653

Query: 149  RQLMEKFDNVMLEHVPRVENKRADALANLATALTMPDDVTLNIPLCQRWIIPPV----RP 208
            ++L+    +VM+EHVPR +NK+ADALA LA+ L MP+D    I + +RW++PP+      
Sbjct: 1654 KRLIGYLGDVMIEHVPRKDNKQADALAKLASTLAMPEDGA-RISIFKRWVVPPIFEHEEI 1713

Query: 209  ECQEVNIATSYLIDEEDWRQPIIEYLEHGKLPKDSRHKIEIRRRAAHFIYYKGTLYRRSL 268
            E  E  +   + I++EDWRQ  ++YL++ KLP D R +++IRRRAA FIYYK TLYRRS 
Sbjct: 1714 EEDETRVVYVFEIEKEDWRQSFVDYLKYEKLPNDPRQRVDIRRRAARFIYYKDTLYRRSF 1773

Query: 269  EGLFLRCLGKEDSVKALKEVHAGVCGAHQSGPKLQFQLRRMGYYWPKMIQDSIDYVKKCE 328
            +G+FLRCLG +++V+A++E H+GVCGAHQSGPKL F+++RMGYYWP M++D ++Y +KC+
Sbjct: 1774 DGVFLRCLGDDEAVQAIEEAHSGVCGAHQSGPKLHFRIKRMGYYWPSMVKDCMEYAQKCQ 1833

Query: 329  PCQYHANFIHQPPEPLHPTVASWPFEAWGLDLVGPITPKSSAGHSYILAATDYFSRWAEA 388
            PCQ+HANFIHQPPEPLHPTVASWPF+AWGLD+VGP+T KSSAGH YILAATDYFS+WAEA
Sbjct: 1834 PCQFHANFIHQPPEPLHPTVASWPFDAWGLDVVGPMT-KSSAGHLYILAATDYFSKWAEA 1893

Query: 389  ISLREAKKENVADFIRTHIIYRYGIPHRIVTDNGKQFSNSMMDKLCEKFKFKQYKSSMYN 448
            + LRE KKENVADFIR +IIYRYG+P  ++TDNGK F NS++DKLCEKF FKQ KSSMYN
Sbjct: 1894 VPLREVKKENVADFIRINIIYRYGVPRYVITDNGKPFCNSVIDKLCEKFGFKQRKSSMYN 1953

Query: 449  AAANGLAEAFNKTLCNLLKKIVSKSKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVE 508
            AAANGLAEAFNKTLCNLLKK+++KSKRDW E++GEALWAYRTT+RTPT  TPY+LVYGVE
Sbjct: 1954 AAANGLAEAFNKTLCNLLKKVIAKSKRDWHERMGEALWAYRTTYRTPTQATPYALVYGVE 2013

Query: 509  DVLPLEREIPSLRMAVQEGLTTEDNVKLRLQELEALDEKRLEAQQALECYQARMSKAFDK 568
             VLPLE++IPSLR+A+QE LT E+N +LRL ELEALDEKRLEAQQ++ECYQAR+S+AF+K
Sbjct: 2014 AVLPLEKQIPSLRIAIQEELTQEENARLRLAELEALDEKRLEAQQSIECYQARLSRAFNK 2073

Query: 569  HVKPRSFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVYTNGAYKIVDQDGLRIG 628
             V+PRSFQVGDLVLAVRRPII T  TGNKFT KWDGPYIVKE Y NGA K+V +DGLRIG
Sbjct: 2074 KVRPRSFQVGDLVLAVRRPIIVTHKTGNKFTSKWDGPYIVKEAYPNGASKLVAEDGLRIG 2133

Query: 629  PINGKFLKKFYA 636
            P NGKFLK++YA
Sbjct: 2134 PKNGKFLKRYYA 2143

The following BLAST results are available for this feature:
BLAST of CSPI06G13630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
POL4_DROME7.1e-2524.78Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaste... [more]
RNH_HALSA3.7e-1339.84Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC... [more]
Y2228_MYCTO7.6e-1144.05Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / ... [more]
Y2228_MYCTU7.6e-1144.05Uncharacterized protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618... [more]
Y2253_MYCBO7.6e-1144.05Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF... [more]
BLAST of CSPI06G13630 vs. TrEMBL
Match NameE-valueIdentityDescription
Q9FE41_ORYSJ8.1e-17749.51Similar to Arabidopsis thaliana chromosome II BAC F26H6 OS=Oryza sativa subsp. j... [more]
Q2AA19_ASPOF1.4e-16548.06RNase H family protein OS=Asparagus officinalis GN=20.t00014 PE=4 SV=1[more]
Q10I89_ORYSJ4.2e-14948.81Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica ... [more]
Q93Y69_ORYSJ4.2e-14948.81Putative gag-pol OS=Oryza sativa subsp. japonica GN=OSJNBb0031G04.9 PE=4 SV=1[more]
A5B6Y5_VITVI1.4e-13641.48Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008801 PE=4 SV=1[more]
BLAST of CSPI06G13630 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G24090.16.6e-1334.25 RNase H family protein[more]
AT3G01410.19.6e-1234.38 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT5G51080.11.8e-1041.30 RNase H family protein[more]
BLAST of CSPI06G13630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778660504|ref|XP_011656345.1|0.0e+0099.17PREDICTED: uncharacterized protein LOC105435721 isoform X1 [Cucumis sativus][more]
gi|731333386|ref|XP_010677706.1|1.2e-25367.11PREDICTED: uncharacterized protein LOC104893305 [Beta vulgaris subsp. vulgaris][more]
gi|848907694|ref|XP_012852915.1|1.0e-24966.67PREDICTED: uncharacterized protein LOC105972499 [Erythranthe guttata][more]
gi|848879042|ref|XP_012839926.1|2.3e-24966.83PREDICTED: uncharacterized protein LOC105960308 [Erythranthe guttata][more]
gi|848907690|ref|XP_012852913.1|2.1e-24766.50PREDICTED: uncharacterized protein LOC105972498 [Erythranthe guttata][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR002156RNaseH_domain
IPR012337RNaseH-like_sf
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0004523RNA-DNA hybrid ribonuclease activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0051252 regulation of RNA metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G13630.1CSPI06G13630.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 347..457
score: 3.5
IPR001584Integrase, catalytic corePROFILEPS50994INTEGRASEcoord: 343..503
score: 22
IPR002156Ribonuclease H domainPROFILEPS50879RNASE_Hcoord: 50..179
score: 14
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 346..506
score: 3.5E-44coord: 54..181
score: 2.4
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 343..497
score: 1.19E-40coord: 51..175
score: 3.04
NoneNo IPR availableunknownCoilCoilcoord: 536..556
scor
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 206..634
score: 3.1
NoneNo IPR availablePANTHERPTHR24559:SF204SUBFAMILY NOT NAMEDcoord: 206..634
score: 3.1
NoneNo IPR availablePFAMPF13456RVT_3coord: 63..177
score: 9.9