CSPI06G12960 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G12960
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Retrotransposon protein, Ty3-gypsy subclass, putative
Location	Chr6 : 11411350 .. 11412426 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTGGGAGAATGTGTCGATGGATTTTATTTCAGGGCTGCCTAAGACCCTGAAGGGTTTCACAGTGATTTTGGTTGTCGTAGACAGGCTTACGAAATCGGCACATTTTGTACCAGGAAAATCCACTTATACTGCTAGTAAGTGGGCAGAGTTGTATTTAACTGAGATTGTGAGACTGCATGGAGTGCCTGTATCGATTGTTTCTGATAGGGATGCACGGTTTACTTCCAAGTTTTGGAAGGGACTTCAGACTGCTATGGGTACGAGATTGGATTTCAGTACAGCCTTTCATCCACAGACTGATGGTCAAACTGAACGTTTGAACCAAGTTTTAGAGGATATGCTACGAGCTTGTGTTATAGAGTTTCCAGGTAGTTGGGACTCTCATCTACATTTGATGGAGTTTGCTTATAACAACAGTTTCCAGGCTACCATCGGTATGGCACCATTTGAGGCTTTGTATGGCAAATGTTGTAGAACCCCTGTTTGTTGGAGTGAGGTTGGTGAACATAGATTGATGGGACCTGAATTAGTTCGGTCTACTAATGAGGCTATTCAAAAGATTAGAGCACGTATGCAAACAGCGCAGAGTAGACAGAAGAGTTATGCAGATGTACGGCGAAAAGACCTTAAGTTCGATGTGGGAGAAAAGGTATTCTTGAAGGTAGCACCTATGAAGGGTGTTATGCGTTTTGAGAAGAAAGGGAAGTTAAGTCCTCGTTTTGTTGGACCATTTGGGATCTTAGAGAGGGTTGGTGTTGTGGCGTATCGCTTGGCATTACCACCATCACTCTCTGCAGTCCATAATGTTTTCCATGTTTCGATGTTGAGGAAGTATGTGGCCAATACATCTCATGTAGTAGACTACGAACCCTTGGAGATTGATGAGCATTTGAGCTATGTAGAACAACCTGTGGAGATTCTGGCTAGAGAGGTAAAGATGCTTCGTAATAGAAGCATTCCATTAGTAAAGGTTTTGTGGAGGAATCATCGAATTGAAGAGGCGACATGGGAGCGAGAAGAAGAGATGAGCAAAGTTATTTCAAGATTAAAACTTTCGAGGACGAAAGTTTCTTAA

mRNA sequence

AAGTGGGAGAATGTGTCGATGGATTTTATTTCAGGGCTGCCTAAGACCCTGAAGGGTTTCACAGTGATTTTGGTTGTCGTAGACAGGCTTACGAAATCGGCACATTTTGTACCAGGAAAATCCACTTATACTGCTAGTAAGTGGGCAGAGTTGTATTTAACTGAGATTGTGAGACTGCATGGAGTGCCTGTATCGATTGTTTCTGATAGGGATGCACGGTTTACTTCCAAGTTTTGGAAGGGACTTCAGACTGCTATGGGTACGAGATTGGATTTCAGTACAGCCTTTCATCCACAGACTGATGGTCAAACTGAACGTTTGAACCAAGTTTTAGAGGATATGCTACGAGCTTGTGTTATAGAGTTTCCAGGTAGTTGGGACTCTCATCTACATTTGATGGAGTTTGCTTATAACAACAGTTTCCAGGCTACCATCGGTATGGCACCATTTGAGGCTTTGTATGGCAAATGTTGTAGAACCCCTGTTTGTTGGAGTGAGGTTGGTGAACATAGATTGATGGGACCTGAATTAGTTCGGTCTACTAATGAGGCTATTCAAAAGATTAGAGCACGTATGCAAACAGCGCAGAGTAGACAGAAGAGTTATGCAGATGTACGGCGAAAAGACCTTAAGTTCGATGTGGGAGAAAAGGTATTCTTGAAGGTAGCACCTATGAAGGGTGTTATGCGTTTTGAGAAGAAAGGGAAGTTAAGTCCTCGTTTTGTTGGACCATTTGGGATCTTAGAGAGGGTTGGTGTTGTGGCGTATCGCTTGGCATTACCACCATCACTCTCTGCAGTCCATAATGTTTTCCATGTTTCGATGTTGAGGAAGTATGTGGCCAATACATCTCATGTAGTAGACTACGAACCCTTGGAGATTGATGAGCATTTGAGCTATGTAGAACAACCTGTGGAGATTCTGGCTAGAGAGGTAAAGATGCTTCGTAATAGAAGCATTCCATTAGTAAAGGTTTTGTGGAGGAATCATCGAATTGAAGAGGCGACATGGGAGCGAGAAGAAGAGATGAGCAAAGTTATTTCAAGATTAAAACTTTCGAGGACGAAAGTTTCTTAA

Coding sequence (CDS)

AAGTGGGAGAATGTGTCGATGGATTTTATTTCAGGGCTGCCTAAGACCCTGAAGGGTTTCACAGTGATTTTGGTTGTCGTAGACAGGCTTACGAAATCGGCACATTTTGTACCAGGAAAATCCACTTATACTGCTAGTAAGTGGGCAGAGTTGTATTTAACTGAGATTGTGAGACTGCATGGAGTGCCTGTATCGATTGTTTCTGATAGGGATGCACGGTTTACTTCCAAGTTTTGGAAGGGACTTCAGACTGCTATGGGTACGAGATTGGATTTCAGTACAGCCTTTCATCCACAGACTGATGGTCAAACTGAACGTTTGAACCAAGTTTTAGAGGATATGCTACGAGCTTGTGTTATAGAGTTTCCAGGTAGTTGGGACTCTCATCTACATTTGATGGAGTTTGCTTATAACAACAGTTTCCAGGCTACCATCGGTATGGCACCATTTGAGGCTTTGTATGGCAAATGTTGTAGAACCCCTGTTTGTTGGAGTGAGGTTGGTGAACATAGATTGATGGGACCTGAATTAGTTCGGTCTACTAATGAGGCTATTCAAAAGATTAGAGCACGTATGCAAACAGCGCAGAGTAGACAGAAGAGTTATGCAGATGTACGGCGAAAAGACCTTAAGTTCGATGTGGGAGAAAAGGTATTCTTGAAGGTAGCACCTATGAAGGGTGTTATGCGTTTTGAGAAGAAAGGGAAGTTAAGTCCTCGTTTTGTTGGACCATTTGGGATCTTAGAGAGGGTTGGTGTTGTGGCGTATCGCTTGGCATTACCACCATCACTCTCTGCAGTCCATAATGTTTTCCATGTTTCGATGTTGAGGAAGTATGTGGCCAATACATCTCATGTAGTAGACTACGAACCCTTGGAGATTGATGAGCATTTGAGCTATGTAGAACAACCTGTGGAGATTCTGGCTAGAGAGGTAAAGATGCTTCGTAATAGAAGCATTCCATTAGTAAAGGTTTTGTGGAGGAATCATCGAATTGAAGAGGCGACATGGGAGCGAGAAGAAGAGATGAGCAAAGTTATTTCAAGATTAAAACTTTCGAGGACGAAAGTTTCTTAA

Homology

[Close]

BLAST of CSPI06G12960 vs. Swiss-Prot
Match: TF29_SCHPO (Transposon Tf2-9 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-9 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.4e-38
Identity = 103/332 (31.02%), Postives = 168/332 (50.60%), Query Frame = 1


Query: 2    WENVSMDFISGLPKTLKGFTVILVVVDRLTKSAHFVPGKSTYTASKWAELYLTEIVRLHG 61
            WE++SMDFI+ LP++  G+  + VVVDR +K A  VP   + TA + A ++   ++   G
Sbjct: 984  WESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFG 1043

Query: 62   VPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIE 121
             P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR     
Sbjct: 1044 NPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCST 1103

Query: 122  FPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYG-KCCRTPVCWSEVGEHRLMGPELVRS 181
             P +W  H+ L++ +YNN+  +   M PFE ++      +P+   E+        E  + 
Sbjct: 1104 HPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQE 1163

Query: 182  TNEAIQKIRARMQTAQSRQKSYADVRRKDL-KFDVGEKVFLKVAPMKGVMRFEKKGKLSP 241
            T +  Q ++  + T   + K Y D++ +++ +F  G+ V +K     G +   K  KL+P
Sbjct: 1164 TIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAP 1223

Query: 242  RFVGPFGILERVGVVAYRLALPPSLSAV-HNVFHVSMLRKYVANTS---HVVDYEPLEID 301
             F GPF +L++ G   Y L LP S+  +  + FHVS L KY  N+      +D   +   
Sbjct: 1224 SFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYRHNSELNYATIDESDIGTI 1283

Query: 302  EHLSYVEQPVEILAREVKMLRNRSIPLVKVLW 328
             H+   +   ++L   VK + N +   +   W
Sbjct: 1284 LHILEHKNREQVLYLNVKYISNLNPSTIMSGW 1308

[Close]

BLAST of CSPI06G12960 vs. Swiss-Prot
Match: TF211_SCHPO (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.4e-38
Identity = 103/332 (31.02%), Postives = 168/332 (50.60%), Query Frame = 1


Query: 2    WENVSMDFISGLPKTLKGFTVILVVVDRLTKSAHFVPGKSTYTASKWAELYLTEIVRLHG 61
            WE++SMDFI+ LP++  G+  + VVVDR +K A  VP   + TA + A ++   ++   G
Sbjct: 984  WESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFG 1043

Query: 62   VPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIE 121
             P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR     
Sbjct: 1044 NPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCST 1103

Query: 122  FPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYG-KCCRTPVCWSEVGEHRLMGPELVRS 181
             P +W  H+ L++ +YNN+  +   M PFE ++      +P+   E+        E  + 
Sbjct: 1104 HPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQE 1163

Query: 182  TNEAIQKIRARMQTAQSRQKSYADVRRKDL-KFDVGEKVFLKVAPMKGVMRFEKKGKLSP 241
            T +  Q ++  + T   + K Y D++ +++ +F  G+ V +K     G +   K  KL+P
Sbjct: 1164 TIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAP 1223

Query: 242  RFVGPFGILERVGVVAYRLALPPSLSAV-HNVFHVSMLRKYVANTS---HVVDYEPLEID 301
             F GPF +L++ G   Y L LP S+  +  + FHVS L KY  N+      +D   +   
Sbjct: 1224 SFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYRHNSELNYATIDESDIGTI 1283

Query: 302  EHLSYVEQPVEILAREVKMLRNRSIPLVKVLW 328
             H+   +   ++L   VK + N +   +   W
Sbjct: 1284 LHILEHKNREQVLYLNVKYISNLNPSTIMSGW 1308

[Close]

BLAST of CSPI06G12960 vs. Swiss-Prot
Match: TF212_SCHPO (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.4e-38
Identity = 103/332 (31.02%), Postives = 168/332 (50.60%), Query Frame = 1


Query: 2    WENVSMDFISGLPKTLKGFTVILVVVDRLTKSAHFVPGKSTYTASKWAELYLTEIVRLHG 61
            WE++SMDFI+ LP++  G+  + VVVDR +K A  VP   + TA + A ++   ++   G
Sbjct: 984  WESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFG 1043

Query: 62   VPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIE 121
             P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR     
Sbjct: 1044 NPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCST 1103

Query: 122  FPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYG-KCCRTPVCWSEVGEHRLMGPELVRS 181
             P +W  H+ L++ +YNN+  +   M PFE ++      +P+   E+        E  + 
Sbjct: 1104 HPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQE 1163

Query: 182  TNEAIQKIRARMQTAQSRQKSYADVRRKDL-KFDVGEKVFLKVAPMKGVMRFEKKGKLSP 241
            T +  Q ++  + T   + K Y D++ +++ +F  G+ V +K     G +   K  KL+P
Sbjct: 1164 TIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAP 1223

Query: 242  RFVGPFGILERVGVVAYRLALPPSLSAV-HNVFHVSMLRKYVANTS---HVVDYEPLEID 301
             F GPF +L++ G   Y L LP S+  +  + FHVS L KY  N+      +D   +   
Sbjct: 1224 SFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYRHNSELNYATIDESDIGTI 1283

Query: 302  EHLSYVEQPVEILAREVKMLRNRSIPLVKVLW 328
             H+   +   ++L   VK + N +   +   W
Sbjct: 1284 LHILEHKNREQVLYLNVKYISNLNPSTIMSGW 1308

[Close]

BLAST of CSPI06G12960 vs. Swiss-Prot
Match: TF21_SCHPO (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.4e-38
Identity = 103/332 (31.02%), Postives = 168/332 (50.60%), Query Frame = 1


Query: 2    WENVSMDFISGLPKTLKGFTVILVVVDRLTKSAHFVPGKSTYTASKWAELYLTEIVRLHG 61
            WE++SMDFI+ LP++  G+  + VVVDR +K A  VP   + TA + A ++   ++   G
Sbjct: 984  WESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFG 1043

Query: 62   VPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIE 121
             P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR     
Sbjct: 1044 NPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCST 1103

Query: 122  FPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYG-KCCRTPVCWSEVGEHRLMGPELVRS 181
             P +W  H+ L++ +YNN+  +   M PFE ++      +P+   E+        E  + 
Sbjct: 1104 HPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQE 1163

Query: 182  TNEAIQKIRARMQTAQSRQKSYADVRRKDL-KFDVGEKVFLKVAPMKGVMRFEKKGKLSP 241
            T +  Q ++  + T   + K Y D++ +++ +F  G+ V +K     G +   K  KL+P
Sbjct: 1164 TIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAP 1223

Query: 242  RFVGPFGILERVGVVAYRLALPPSLSAV-HNVFHVSMLRKYVANTS---HVVDYEPLEID 301
             F GPF +L++ G   Y L LP S+  +  + FHVS L KY  N+      +D   +   
Sbjct: 1224 SFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYRHNSELNYATIDESDIGTI 1283

Query: 302  EHLSYVEQPVEILAREVKMLRNRSIPLVKVLW 328
             H+   +   ++L   VK + N +   +   W
Sbjct: 1284 LHILEHKNREQVLYLNVKYISNLNPSTIMSGW 1308

[Close]

BLAST of CSPI06G12960 vs. Swiss-Prot
Match: TF22_SCHPO (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.4e-38
Identity = 103/332 (31.02%), Postives = 168/332 (50.60%), Query Frame = 1


Query: 2    WENVSMDFISGLPKTLKGFTVILVVVDRLTKSAHFVPGKSTYTASKWAELYLTEIVRLHG 61
            WE++SMDFI+ LP++  G+  + VVVDR +K A  VP   + TA + A ++   ++   G
Sbjct: 984  WESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFG 1043

Query: 62   VPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVIE 121
             P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR     
Sbjct: 1044 NPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCST 1103

Query: 122  FPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYG-KCCRTPVCWSEVGEHRLMGPELVRS 181
             P +W  H+ L++ +YNN+  +   M PFE ++      +P+   E+        E  + 
Sbjct: 1104 HPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQE 1163

Query: 182  TNEAIQKIRARMQTAQSRQKSYADVRRKDL-KFDVGEKVFLKVAPMKGVMRFEKKGKLSP 241
            T +  Q ++  + T   + K Y D++ +++ +F  G+ V +K     G +   K  KL+P
Sbjct: 1164 TIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAP 1223

Query: 242  RFVGPFGILERVGVVAYRLALPPSLSAV-HNVFHVSMLRKYVANTS---HVVDYEPLEID 301
             F GPF +L++ G   Y L LP S+  +  + FHVS L KY  N+      +D   +   
Sbjct: 1224 SFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYRHNSELNYATIDESDIGTI 1283

Query: 302  EHLSYVEQPVEILAREVKMLRNRSIPLVKVLW 328
             H+   +   ++L   VK + N +   +   W
Sbjct: 1284 LHILEHKNREQVLYLNVKYISNLNPSTIMSGW 1308

[Close]

BLAST of CSPI06G12960 vs. TrEMBL
Match: Q84KB0_CUCME (Pol protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 3.2e-178
Identity = 303/343 (88.34%), Postives = 330/343 (96.21%), Query Frame = 1


Query: 1   KWENVSMDFISGLPKTLKGFTVILVVVDRLTKSAHFVPGKSTYTASKWAELYLTEIVRLH 60
           KWENVSMDFI+GLP+TL+GFTVI VVVDRLTKSAHFVPGKSTYTASKWA+LY++EIVRLH
Sbjct: 571 KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLH 630

Query: 61  GVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVI 120
           GVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAC +
Sbjct: 631 GVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL 690

Query: 121 EFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRS 180
           EFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALYG+CCR+PVCW EVGE RLMGPELV+S
Sbjct: 691 EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQS 750

Query: 181 TNEAIQKIRARMQTAQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPR 240
           TNEAIQKIR+RM TAQSRQKSYADVRRKDL+F+VG+KVFLKVAPMKGV+RFE++GKLSPR
Sbjct: 751 TNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPR 810

Query: 241 FVGPFGILERVGVVAYRLALPPSLSAVHNVFHVSMLRKYVANTSHVVDYEPLEIDEHLSY 300
           FVGPF ILER+G VAYRLALPPSLS VH+VFHVSMLRKYV + SHVVDYEPLEIDE+LSY
Sbjct: 811 FVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSY 870

Query: 301 VEQPVEILAREVKMLRNRSIPLVKVLWRNHRIEEATWEREEEM 344
           VEQPVE+LAR VK LRN+ IPLVKVLWRNHR+EEATWERE++M
Sbjct: 871 VEQPVEVLARGVKTLRNKQIPLVKVLWRNHRVEEATWEREDDM 913

[Close]

BLAST of CSPI06G12960 vs. TrEMBL
Match: A0A0V0IPG6_SOLCH (Putative DNA/RNA polymerases superfamily protein-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 2.7e-129
Identity = 216/343 (62.97%), Postives = 288/343 (83.97%), Query Frame = 1


Query: 1   KWENVSMDFISGLPKTLKGFTVILVVVDRLTKSAHFVPGKSTYTASKWAELYLTEIVRLH 60
           KWE V+MDF+ GLP+TL+G+  + V+VDRLTKSAHF+P K+TY   K+A++++ EIVRLH
Sbjct: 88  KWERVTMDFVVGLPRTLRGYDSVWVIVDRLTKSAHFLPVKATYGGVKYAQIFMNEIVRLH 147

Query: 61  GVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVI 120
           GVP+SI+SDR ++FTS+FW+  Q A+GTR+D STAFHPQTDGQ+ER  Q+LEDMLRAC++
Sbjct: 148 GVPISIISDRGSQFTSRFWRSFQEALGTRVDLSTAFHPQTDGQSERTIQILEDMLRACIL 207

Query: 121 EFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRS 180
           +F GSWD++L L EFAYNNSFQ++I MAP+EALYG+ CR+P+ W EVGE  ++GP+LV+ 
Sbjct: 208 DFGGSWDAYLPLAEFAYNNSFQSSIQMAPYEALYGRRCRSPIGWFEVGEANVLGPDLVQE 267

Query: 181 TNEAIQKIRARMQTAQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPR 240
             + +Q IR R+ TAQSRQKSYAD RR+DL+F VG+KVFL+V+PMKGVMRF K+GKLSPR
Sbjct: 268 AVDKVQLIRQRLLTAQSRQKSYADRRRRDLRFTVGDKVFLRVSPMKGVMRFGKRGKLSPR 327

Query: 241 FVGPFGILERVGVVAYRLALPPSLSAVHNVFHVSMLRKYVANTSHVVDYEPLEIDEHLSY 300
           ++GP+ IL+RVG VAYRLALPP +S +H VFHVSMLRKY++++SHV++   + IDE+L+Y
Sbjct: 328 YIGPYEILDRVGGVAYRLALPPKMSFIHPVFHVSMLRKYISDSSHVLEAPTIPIDENLTY 387

Query: 301 VEQPVEILAREVKMLRNRSIPLVKVLWRNHRIEEATWEREEEM 344
            E+PV I+ ++V+ LR++ I  VKVLWRNH  EEATWE E++M
Sbjct: 388 EEEPVAIVDKQVRRLRSKEIVSVKVLWRNHTTEEATWELEKDM 430

[Close]

BLAST of CSPI06G12960 vs. TrEMBL
Match: A0A061EWB7_THECC (Retrotransposon protein, Ty3-gypsy subclass, putative OS=Theobroma cacao GN=TCM_023662 PE=4 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 6.0e-129
Identity = 224/343 (65.31%), Postives = 278/343 (81.05%), Query Frame = 1


Query: 1   KWENVSMDFISGLPKTLKGFTVILVVVDRLTKSAHFVPGKSTYTASKWAELYLTEIVRLH 60
           KWE+++MDF++GLP+T  G+  I +VVDRLTKSAHF+P K+TY A+++A +Y+ EIVRLH
Sbjct: 169 KWEHIAMDFVTGLPRTSGGYDSIWIVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLH 228

Query: 61  GVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVI 120
           G+P+SIVSDR A+FTS+FW  LQ A+GT+LDFSTAFHPQTDGQ+ER  Q LEDMLRACVI
Sbjct: 229 GIPISIVSDRGAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVI 288

Query: 121 EFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRS 180
           +    W+ +L L+EFAYNNSFQ +I MAPFEALYG+ CR+P+ W EVGE +L+GPELV+ 
Sbjct: 289 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQD 348

Query: 181 TNEAIQKIRARMQTAQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPR 240
             E I  IR RM TAQSR KSYAD RR+DL+F VG+ VFLKV+P KGVMRF KKGKLSPR
Sbjct: 349 ATEKIHMIRQRMLTAQSRHKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSPR 408

Query: 241 FVGPFGILERVGVVAYRLALPPSLSAVHNVFHVSMLRKYVANTSHVVDYEPLEIDEHLSY 300
           ++GPF IL++VG VAYRLALPP LS +H VFHVSMLRKY  + SHV+ YE +++ + L+Y
Sbjct: 409 YIGPFEILDKVGTVAYRLALPPDLSNIHPVFHVSMLRKYNPDPSHVIRYETIQLQDDLTY 468

Query: 301 VEQPVEILAREVKMLRNRSIPLVKVLWRNHRIEEATWEREEEM 344
            EQPV IL R+VK LR++ +  VKVLWRNH  EE TWE E+EM
Sbjct: 469 EEQPVAILDRQVKKLRSKDVASVKVLWRNHTSEEVTWEAEDEM 511

[Close]

BLAST of CSPI06G12960 vs. TrEMBL
Match: A0A061GA43_THECC (DNA/RNA polymerases superfamily protein OS=Theobroma cacao GN=TCM_028107 PE=4 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 6.0e-129
Identity = 225/343 (65.60%), Postives = 277/343 (80.76%), Query Frame = 1


Query: 1   KWENVSMDFISGLPKTLKGFTVILVVVDRLTKSAHFVPGKSTYTASKWAELYLTEIVRLH 60
           KWE+++MDF++GLP+T  G+  I +VVD+LTKSAHF+P K+TY A+ +A +Y+ EIVRLH
Sbjct: 327 KWEHIAMDFVTGLPRTSGGYDSIWIVVDQLTKSAHFLPVKTTYGAAHYARVYVDEIVRLH 386

Query: 61  GVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVI 120
           G+P+SIVSDR A+FTS+FW  LQ A+GT+LDFSTAFHPQTDGQ+ER  Q LEDMLRACVI
Sbjct: 387 GIPISIVSDRGAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVI 446

Query: 121 EFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRS 180
           +    W+ +L L+EFAYNNSFQ +I MAPFEALYG+ CR+P+ W EVGE +L+GPELV+ 
Sbjct: 447 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQD 506

Query: 181 TNEAIQKIRARMQTAQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPR 240
             E I  IR RM TAQSRQKSYAD RR+DL+F VG+ VFLK +P KGVMRF KKGKLSPR
Sbjct: 507 ATEKIHMIRQRMLTAQSRQKSYADNRRRDLEFQVGDHVFLKFSPTKGVMRFGKKGKLSPR 566

Query: 241 FVGPFGILERVGVVAYRLALPPSLSAVHNVFHVSMLRKYVANTSHVVDYEPLEIDEHLSY 300
           ++GPF ILE+VG VAYRLALPP LS +H VFHVSMLRKY  + SHV+ YE +++ + LSY
Sbjct: 567 YIGPFKILEKVGAVAYRLALPPDLSNIHPVFHVSMLRKYNLDPSHVIRYETIQLQDDLSY 626

Query: 301 VEQPVEILAREVKMLRNRSIPLVKVLWRNHRIEEATWEREEEM 344
            EQPV IL R+VK LR++ +  VKVLWRNH  EE TWE E+EM
Sbjct: 627 EEQPVAILDRQVKKLRSKDVASVKVLWRNHTSEEVTWEAEDEM 669

[Close]

BLAST of CSPI06G12960 vs. TrEMBL
Match: A5BA10_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009489 PE=4 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 6.0e-129
Identity = 223/343 (65.01%), Postives = 279/343 (81.34%), Query Frame = 1


Query: 1   KWENVSMDFISGLPKTLKGFTVILVVVDRLTKSAHFVPGKSTYTASKWAELYLTEIVRLH 60
           KWE+++MDF+ GLP+TL G   I V+VDRLTKSAHF+P K  ++  + A LY+ EIVR+H
Sbjct: 624 KWEHITMDFVIGLPRTLGGNNAIWVIVDRLTKSAHFLPMKVNFSLDRLASLYVKEIVRMH 683

Query: 61  GVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVI 120
           GVPVSIVSDRD RFTS+FW  LQ ++GT+L FSTAFHPQTDGQ+ER+ QVLED+ RAC++
Sbjct: 684 GVPVSIVSDRDPRFTSRFWHSLQKSLGTKLSFSTAFHPQTDGQSERVIQVLEDLFRACIL 743

Query: 121 EFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRS 180
           +  G+WD HL L+EFAYNNSFQA+IGMAPFEALYG+ CR+P+CW++VGE +L+GPELV+ 
Sbjct: 744 DLQGNWDDHLPLVEFAYNNSFQASIGMAPFEALYGRKCRSPICWNDVGERKLLGPELVQL 803

Query: 181 TNEAIQKIRARMQTAQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPR 240
           T E +  I+ R++ AQSR KSY D RR+DL+F+VG+ VFLKV+PMK VMRF +KGKLSPR
Sbjct: 804 TVEKVALIKERLKAAQSRHKSYVDHRRRDLEFEVGDHVFLKVSPMKSVMRFGRKGKLSPR 863

Query: 241 FVGPFGILERVGVVAYRLALPPSLSAVHNVFHVSMLRKYVANTSHVVDYEPLEIDEHLSY 300
           FVG F ILERVG +AY++ALPPSLS VHNVFHVS LRKY+ + SHVVD EP++I E L+Y
Sbjct: 864 FVGLFEILERVGTLAYKVALPPSLSKVHNVFHVSTLRKYIYDPSHVVDLEPIQIFEDLTY 923

Query: 301 VEQPVEILAREVKMLRNRSIPLVKVLWRNHRIEEATWEREEEM 344
            E PV+I+    K+LR+  + LVKV W NH I EATWE EEEM
Sbjct: 924 EEVPVQIVDMMDKVLRHAVVKLVKVQWSNHSIREATWELEEEM 966

[Close]

BLAST of CSPI06G12960 vs. NCBI nr
Match: gi|28558781|gb|AAO45752.1| (pol protein [Cucumis melo subsp. melo])

HSP 1 Score: 632.5 bits (1630), Expect = 4.5e-178
Identity = 303/343 (88.34%), Postives = 330/343 (96.21%), Query Frame = 1


Query: 1   KWENVSMDFISGLPKTLKGFTVILVVVDRLTKSAHFVPGKSTYTASKWAELYLTEIVRLH 60
           KWENVSMDFI+GLP+TL+GFTVI VVVDRLTKSAHFVPGKSTYTASKWA+LY++EIVRLH
Sbjct: 571 KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLH 630

Query: 61  GVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVI 120
           GVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAC +
Sbjct: 631 GVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL 690

Query: 121 EFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRS 180
           EFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALYG+CCR+PVCW EVGE RLMGPELV+S
Sbjct: 691 EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQS 750

Query: 181 TNEAIQKIRARMQTAQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPR 240
           TNEAIQKIR+RM TAQSRQKSYADVRRKDL+F+VG+KVFLKVAPMKGV+RFE++GKLSPR
Sbjct: 751 TNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPR 810

Query: 241 FVGPFGILERVGVVAYRLALPPSLSAVHNVFHVSMLRKYVANTSHVVDYEPLEIDEHLSY 300
           FVGPF ILER+G VAYRLALPPSLS VH+VFHVSMLRKYV + SHVVDYEPLEIDE+LSY
Sbjct: 811 FVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSY 870

Query: 301 VEQPVEILAREVKMLRNRSIPLVKVLWRNHRIEEATWEREEEM 344
           VEQPVE+LAR VK LRN+ IPLVKVLWRNHR+EEATWERE++M
Sbjct: 871 VEQPVEVLARGVKTLRNKQIPLVKVLWRNHRVEEATWEREDDM 913

[Close]

BLAST of CSPI06G12960 vs. NCBI nr
Match: gi|848857712|ref|XP_012829796.1| (PREDICTED: uncharacterized protein LOC105950954 [Erythranthe guttata])

HSP 1 Score: 471.1 bits (1211), Expect = 1.7e-129
Identity = 218/343 (63.56%), Postives = 283/343 (82.51%), Query Frame = 1


Query: 1    KWENVSMDFISGLPKTLKGFTVILVVVDRLTKSAHFVPGKSTYTASKWAELYLTEIVRLH 60
            KWE+V+MDF+ G PKTLKG   I V+VDRLTKSAHF+P K+T++  K AELY+ EIVRLH
Sbjct: 892  KWESVTMDFVQGFPKTLKGSDSIWVIVDRLTKSAHFLPVKTTFSLEKLAELYIGEIVRLH 951

Query: 61   GVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVI 120
            GVP+SI+SDRD RFTSKFWK L  AMGTRL FSTA+HPQTDGQ+ER  + LEDMLRAC++
Sbjct: 952  GVPISIISDRDPRFTSKFWKRLHEAMGTRLSFSTAYHPQTDGQSERTIKTLEDMLRACIM 1011

Query: 121  EFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRS 180
            +F G+W+S L L+EF+YNNSFQ++IGMAP+EALYG+ C +P+ W EVGE RL+GPELV+ 
Sbjct: 1012 DFGGNWESRLPLIEFSYNNSFQSSIGMAPYEALYGRKCHSPIHWDEVGERRLLGPELVQH 1071

Query: 181  TNEAIQKIRARMQTAQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPR 240
            T + I+ IR +M+TAQ RQ+ YA+ RR++L+F  G+ VFLKVAP+KG+MRF K+GKLSPR
Sbjct: 1072 TVDIIKNIREKMRTAQDRQQKYANKRRRELEFQAGDHVFLKVAPLKGIMRFGKRGKLSPR 1131

Query: 241  FVGPFGILERVGVVAYRLALPPSLSAVHNVFHVSMLRKYVANTSHVVDYEPLEIDEHLSY 300
            F+GPF IL+R+G  AYRLALPP LS VHNVF VSMLRKY+ N +H+++ EPL++  +LS+
Sbjct: 1132 FIGPFEILDRIGGQAYRLALPPQLSKVHNVFQVSMLRKYIPNPNHILETEPLDLSPNLSF 1191

Query: 301  VEQPVEILAREVKMLRNRSIPLVKVLWRNHRIEEATWEREEEM 344
             E+P +IL R+V+ LRN+ I L K+LW+NH  +E+TWE E+E+
Sbjct: 1192 TEEPSQILDRKVRKLRNKEIRLAKILWKNHSPDESTWELEDEI 1234

[Close]

BLAST of CSPI06G12960 vs. NCBI nr
Match: gi|147769978|emb|CAN61139.1| (hypothetical protein VITISV_009489 [Vitis vinifera])

HSP 1 Score: 468.8 bits (1205), Expect = 8.7e-129
Identity = 223/343 (65.01%), Postives = 279/343 (81.34%), Query Frame = 1


Query: 1   KWENVSMDFISGLPKTLKGFTVILVVVDRLTKSAHFVPGKSTYTASKWAELYLTEIVRLH 60
           KWE+++MDF+ GLP+TL G   I V+VDRLTKSAHF+P K  ++  + A LY+ EIVR+H
Sbjct: 624 KWEHITMDFVIGLPRTLGGNNAIWVIVDRLTKSAHFLPMKVNFSLDRLASLYVKEIVRMH 683

Query: 61  GVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVI 120
           GVPVSIVSDRD RFTS+FW  LQ ++GT+L FSTAFHPQTDGQ+ER+ QVLED+ RAC++
Sbjct: 684 GVPVSIVSDRDPRFTSRFWHSLQKSLGTKLSFSTAFHPQTDGQSERVIQVLEDLFRACIL 743

Query: 121 EFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRS 180
           +  G+WD HL L+EFAYNNSFQA+IGMAPFEALYG+ CR+P+CW++VGE +L+GPELV+ 
Sbjct: 744 DLQGNWDDHLPLVEFAYNNSFQASIGMAPFEALYGRKCRSPICWNDVGERKLLGPELVQL 803

Query: 181 TNEAIQKIRARMQTAQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPR 240
           T E +  I+ R++ AQSR KSY D RR+DL+F+VG+ VFLKV+PMK VMRF +KGKLSPR
Sbjct: 804 TVEKVALIKERLKAAQSRHKSYVDHRRRDLEFEVGDHVFLKVSPMKSVMRFGRKGKLSPR 863

Query: 241 FVGPFGILERVGVVAYRLALPPSLSAVHNVFHVSMLRKYVANTSHVVDYEPLEIDEHLSY 300
           FVG F ILERVG +AY++ALPPSLS VHNVFHVS LRKY+ + SHVVD EP++I E L+Y
Sbjct: 864 FVGLFEILERVGTLAYKVALPPSLSKVHNVFHVSTLRKYIYDPSHVVDLEPIQIFEDLTY 923

Query: 301 VEQPVEILAREVKMLRNRSIPLVKVLWRNHRIEEATWEREEEM 344
            E PV+I+    K+LR+  + LVKV W NH I EATWE EEEM
Sbjct: 924 EEVPVQIVDMMDKVLRHAVVKLVKVQWSNHSIREATWELEEEM 966

[Close]

BLAST of CSPI06G12960 vs. NCBI nr
Match: gi|590633659|ref|XP_007028165.1| (Retrotransposon protein, Ty3-gypsy subclass, putative [Theobroma cacao])

HSP 1 Score: 468.8 bits (1205), Expect = 8.7e-129
Identity = 224/343 (65.31%), Postives = 278/343 (81.05%), Query Frame = 1


Query: 1   KWENVSMDFISGLPKTLKGFTVILVVVDRLTKSAHFVPGKSTYTASKWAELYLTEIVRLH 60
           KWE+++MDF++GLP+T  G+  I +VVDRLTKSAHF+P K+TY A+++A +Y+ EIVRLH
Sbjct: 169 KWEHIAMDFVTGLPRTSGGYDSIWIVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLH 228

Query: 61  GVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVI 120
           G+P+SIVSDR A+FTS+FW  LQ A+GT+LDFSTAFHPQTDGQ+ER  Q LEDMLRACVI
Sbjct: 229 GIPISIVSDRGAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVI 288

Query: 121 EFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRS 180
           +    W+ +L L+EFAYNNSFQ +I MAPFEALYG+ CR+P+ W EVGE +L+GPELV+ 
Sbjct: 289 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQD 348

Query: 181 TNEAIQKIRARMQTAQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPR 240
             E I  IR RM TAQSR KSYAD RR+DL+F VG+ VFLKV+P KGVMRF KKGKLSPR
Sbjct: 349 ATEKIHMIRQRMLTAQSRHKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSPR 408

Query: 241 FVGPFGILERVGVVAYRLALPPSLSAVHNVFHVSMLRKYVANTSHVVDYEPLEIDEHLSY 300
           ++GPF IL++VG VAYRLALPP LS +H VFHVSMLRKY  + SHV+ YE +++ + L+Y
Sbjct: 409 YIGPFEILDKVGTVAYRLALPPDLSNIHPVFHVSMLRKYNPDPSHVIRYETIQLQDDLTY 468

Query: 301 VEQPVEILAREVKMLRNRSIPLVKVLWRNHRIEEATWEREEEM 344
            EQPV IL R+VK LR++ +  VKVLWRNH  EE TWE E+EM
Sbjct: 469 EEQPVAILDRQVKKLRSKDVASVKVLWRNHTSEEVTWEAEDEM 511

[Close]

BLAST of CSPI06G12960 vs. NCBI nr
Match: gi|590617570|ref|XP_007023829.1| (DNA/RNA polymerases superfamily protein [Theobroma cacao])

HSP 1 Score: 468.8 bits (1205), Expect = 8.7e-129
Identity = 225/343 (65.60%), Postives = 277/343 (80.76%), Query Frame = 1


Query: 1   KWENVSMDFISGLPKTLKGFTVILVVVDRLTKSAHFVPGKSTYTASKWAELYLTEIVRLH 60
           KWE+++MDF++GLP+T  G+  I +VVD+LTKSAHF+P K+TY A+ +A +Y+ EIVRLH
Sbjct: 327 KWEHIAMDFVTGLPRTSGGYDSIWIVVDQLTKSAHFLPVKTTYGAAHYARVYVDEIVRLH 386

Query: 61  GVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACVI 120
           G+P+SIVSDR A+FTS+FW  LQ A+GT+LDFSTAFHPQTDGQ+ER  Q LEDMLRACVI
Sbjct: 387 GIPISIVSDRGAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVI 446

Query: 121 EFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRTPVCWSEVGEHRLMGPELVRS 180
           +    W+ +L L+EFAYNNSFQ +I MAPFEALYG+ CR+P+ W EVGE +L+GPELV+ 
Sbjct: 447 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQD 506

Query: 181 TNEAIQKIRARMQTAQSRQKSYADVRRKDLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPR 240
             E I  IR RM TAQSRQKSYAD RR+DL+F VG+ VFLK +P KGVMRF KKGKLSPR
Sbjct: 507 ATEKIHMIRQRMLTAQSRQKSYADNRRRDLEFQVGDHVFLKFSPTKGVMRFGKKGKLSPR 566

Query: 241 FVGPFGILERVGVVAYRLALPPSLSAVHNVFHVSMLRKYVANTSHVVDYEPLEIDEHLSY 300
           ++GPF ILE+VG VAYRLALPP LS +H VFHVSMLRKY  + SHV+ YE +++ + LSY
Sbjct: 567 YIGPFKILEKVGAVAYRLALPPDLSNIHPVFHVSMLRKYNLDPSHVIRYETIQLQDDLSY 626

Query: 301 VEQPVEILAREVKMLRNRSIPLVKVLWRNHRIEEATWEREEEM 344
            EQPV IL R+VK LR++ +  VKVLWRNH  EE TWE E+EM
Sbjct: 627 EEQPVAILDRQVKKLRSKDVASVKVLWRNHTSEEVTWEAEDEM 669

The following BLAST results are available for this feature:

BLAST of CSPI06G12960 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TF29_SCHPO	2.4e-38	31.02	Transposon Tf2-9 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF211_SCHPO	2.4e-38	31.02	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
TF212_SCHPO	2.4e-38	31.02	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
TF21_SCHPO	2.4e-38	31.02	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF22_SCHPO	2.4e-38	31.02	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of CSPI06G12960 vs. TrEMBL


Match Name	E-value	Identity	Description
Q84KB0_CUCME	3.2e-178	88.34	Pol protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0V0IPG6_SOLCH	2.7e-129	62.97	Putative DNA/RNA polymerases superfamily protein-like OS=Solanum chacoense PE=4 ...	[more]
A0A061EWB7_THECC	6.0e-129	65.31	Retrotransposon protein, Ty3-gypsy subclass, putative OS=Theobroma cacao GN=TCM_...	[more]
A0A061GA43_THECC	6.0e-129	65.60	DNA/RNA polymerases superfamily protein OS=Theobroma cacao GN=TCM_028107 PE=4 SV...	[more]
A5BA10_VITVI	6.0e-129	65.01	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009489 PE=4 SV=1	[more]

BLAST of CSPI06G12960 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI06G12960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|28558781\|gb\|AAO45752.1\|	4.5e-178	88.34	pol protein [Cucumis melo subsp. melo]	[more]
gi\|848857712\|ref\|XP_012829796.1\|	1.7e-129	63.56	PREDICTED: uncharacterized protein LOC105950954 [Erythranthe guttata]	[more]
gi\|147769978\|emb\|CAN61139.1\|	8.7e-129	65.01	hypothetical protein VITISV_009489 [Vitis vinifera]	[more]
gi\|590633659\|ref\|XP_007028165.1\|	8.7e-129	65.31	Retrotransposon protein, Ty3-gypsy subclass, putative [Theobroma cacao]	[more]
gi\|590617570\|ref\|XP_007023829.1\|	8.7e-129	65.60	DNA/RNA polymerases superfamily protein [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf
IPR016197	Chromo-like_dom_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0015074	DNA integration

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G12960.1	CSPI06G12960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 5..114 score: 3.6
IPR001584	Integrase, catalytic core	PROFILE	PS50994	INTEGRASE	coord: 1..157 score: 18
IPR012337	Ribonuclease H-like domain	GENE3D	G3DSA:3.30.420.10		coord: 2..161 score: 3.3
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 2..151 score: 7.44
IPR016197	Chromo domain-like	unknown	SSF54160	Chromo domain-like	coord: 266..345 score: 9.8
None	No IPR available	unknown	Coil	Coil	coord: 178..198 scor
None	No IPR available	PANTHER	PTHR24559	FAMILY NOT NAMED	coord: 1..350 score: 5.1E
None	No IPR available	PANTHER	PTHR24559:SF207	SUBFAMILY NOT NAMED	coord: 1..350 score: 5.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G12960	MELO3C019732	Melon (DHL92) v3.5.1	cpimeB437
CSPI06G12960	MELO3C035055.2	Melon (DHL92) v3.6.1	cpimedB429

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G12960	Cucumber (Chinese Long) v3	cpicucB364
CSPI06G12960	Cucumber (Chinese Long) v3	cpicucB369
CSPI06G12960	Watermelon (97103) v2	cpiwmbB453
CSPI06G12960	Wax gourd	cpiwgoB573
CSPI06G12960	Wax gourd	cpiwgoB612
CSPI06G12960	Wild cucumber (PI 183967)	cpicpiB187
CSPI06G12960	Cucumber (Gy14) v1	cgycpiB570
CSPI06G12960	Cucurbita maxima (Rimu)	cmacpiB138
CSPI06G12960	Cucurbita maxima (Rimu)	cmacpiB562
CSPI06G12960	Cucurbita maxima (Rimu)	cmacpiB637
CSPI06G12960	Cucurbita moschata (Rifu)	cmocpiB127
CSPI06G12960	Cucurbita moschata (Rifu)	cmocpiB518
CSPI06G12960	Cucurbita moschata (Rifu)	cmocpiB550
CSPI06G12960	Cucurbita moschata (Rifu)	cmocpiB630
CSPI06G12960	Cucurbita moschata (Rifu)	cmocpiB640
CSPI06G12960	Cucumber (Chinese Long) v2	cpicuB314
CSPI06G12960	Cucumber (Chinese Long) v2	cpicuB318
CSPI06G12960	Melon (DHL92) v3.5.1	cpimeB495
CSPI06G12960	Watermelon (Charleston Gray)	cpiwcgB460
CSPI06G12960	Watermelon (97103) v1	cpiwmB532
CSPI06G12960	Cucurbita pepo (Zucchini)	cpecpiB295
CSPI06G12960	Cucurbita pepo (Zucchini)	cpecpiB746
CSPI06G12960	Bottle gourd (USVL1VR-Ls)	cpilsiB419
CSPI06G12960	Bottle gourd (USVL1VR-Ls)	cpilsiB433
CSPI06G12960	Melon (DHL92) v3.6.1	cpimedB415
CSPI06G12960	Melon (DHL92) v3.6.1	cpimedB482
CSPI06G12960	Cucumber (Gy14) v2	cgybcpiB288
CSPI06G12960	Cucumber (Gy14) v2	cgybcpiB292
CSPI06G12960	Silver-seed gourd	carcpiB0027
CSPI06G12960	Silver-seed gourd	carcpiB0426
CSPI06G12960	Silver-seed gourd	carcpiB0568