CSPI06G12950 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G12950
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	Chr6 : 11374267 .. 11377509 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACATAAAGCTTATTCTTGTTACCTATCTAGATCTAGTGCCTGTAATGTCTATGAAAAAATGAAATGGATCCCTAAATATGTAAATGCTAACATTCTAGGACCCAAACAAGTATGGGTACCAAAGGATCAAACTTGAAATTAGTTGTTTTTAGGTTTGTTTGAAAGCCTCCAAGAAAAACAAATGGTACTTGGATAGTGGTTGCTCAAGACACATGACGGGAGACCGATCCAAGCTTATCTCTTTCTCCAAAAAGAATGGAGGCATGGTAACCTTTGGTGACAACAAGAAAGGTAAAATAATTGGTAAGGGTAATATAGGAAATGATTCATCTACTTTGATTGAAAATGTTCATTTGGTTGATGGTTTAAAGCATGATTTGCTTAGTATTAGTCAATTGTGTGATAAAGGATTTAGAGTAATATTTGATAAAAAAAATTGCATAATTGAAAATGTTAGTGATAGAAAAGTTTTGTTTGTTGGAAATAGGGATGAAAATGTGTACACTCTTGATTTGAATGATTATCCTATTATTGATAAATGTCTTTCGGTTTTGCATAATGATTCTTGGTTATGGCATAGAAGACTAGGACATGCTAGCATGCACTTAATTTCAAATATTTCTAAAAATTGTTTGGTTAGAGGTCTTCCTAGTTTTAAATTTGAAAAAGACAAAGTTTGTGATGCTTGTCAAATGGGTAAGCAAACTAAGTCCTCTTTCAAATCTAAAAATGTGATCTCTACTACTAGACCCTTACAACTATTACACATGGACTTATTTGGCCCTTCTAGAATTGCTAGTTATGGAGGAAATTATTATGCTTTTGTGATAGTTGATGATTTTTCTAGATTTACTTGGGTTTTGATGATAAAACATAAGGATGATGCTTTGAAAAGTTTTATTAGTTTTGCAAAAAGAGTACAAAATGAAAAAGGATTTTTTATTTCCAAAATTAGGAGTGATCACGGAGGAGAATTTGATAATGATGCTTTTAAAGCTTTTTGTGAAGAAAATGGTTTTTCCCATAATTTTTCCTCTCCAAGAACTCCTCAACAAAATGGTGTAGTTGAAAGGAAAAATCGTACTTTGCAAGAATTTGCTAGATCAATGTTGAATGAGTATGGTTTACCTAAATATTTTTGGACGGAAGCCGTTAACACCGCTTGCTATGTTTCAAATAGAGTTTTAGTTAGACCCTCTTTAGATAAAACTCCTTATGAACTTTGGCATGGAAAAATTCCAAATATTGGGTATTTCAAAGTTTTCGGTTGTAAATGTTTTATTTTGAATAACAAAGAAAAACTTGGAAAATTTGATTCTAAGACGGATGTTGGTATTTTTCTAGGATATTCCTCTACTAGTAAAGCTTATAGAGTTTTCAATAAGAAAACTTTAGTTATTGAGGAATCTATTCATGTTGTATTTGATGAATCTTGGAATAATGTTTCTAATGAGTCTATTTGTAGTGATGATTTAGAAAAAGATTTTGGAGATTTACTTGTTAATGACAAAGGCAAAGAAATTGTTCCAAGTATGCAAGATGTGAACATCATAGAAAAGAAAGAAGAGGGTTCTTCATCCTTGCCTAAAGAGTGGAGATATGCTCTATCCCATCCCAAGGATCTAATTCTTGGCAATCCCGAACAAGGTGTCAAAACTCGTTCTTCTCTTAATTTATTTAGTAATCTTGCTTTTGTGTCTCAAATTGAACCTAGAAGTTTTAAAGATGCCGAATGTGATGAGTTTTGGATTTTAGCTATGCAAGAAGAATTAAATCAATTTGAAAGAAACAAAGTTTGGAAATTAGTCCCTAGGCCTTCTAATGCATCTATAATCGGAACTAAATGGGTTTTTAGAAATAAGATGGATGAAAATGGAAATATCATTAGAAATAAAGCTAGACTTGTAGCTCAAGGTTATTGTCAAGAAGAAGGTATAGATTATGAAGAGACTTTTGCACCGGTTGCTAGATTAGAAGCTATTAGAATGTTGCTTGCTTTTGCTTCTTATAAAAATTTCATTTTGTATCAAATGGATGTAAAAAGTGCTTTTTTAAACGGTTATATTGTAGAGGAAGTTTACGTAGAACAACCTCCGGGTTTTGAAAGTTTTGATTTACCTAATCATGTTTATAAGTTGAAAAAGGCTCTTTATGGCTTAAAACAAGCTCCAAGAGCTTGGTATGATAGACTTAGCAAGTTTTTACTTGAGAATGACTTTAAGATGGGAAAAATTGATAATACTCTATTTATTAAAGTTAAAAATAATGACATGCTTATAGTACAAATTTATGTGGATGATATTATATTTGGTTCTACTAATTCATCTTTGTGTGAAGAATTTTCCAAGTGTATGCATAATGAGTTTGAGATGAGTATGATGGGAGAACTTAGTTTCTTCCTTGGTCTTCAAATCAAACAACTCAAGGATGGCATCTTCATAAGTCAAGAAAAATACACAAGGGATTTGCTCAAGAAATTCAAATTAAATGAAGGTAAAGTTGCAAAAACTCCTATGAGCACTACCACTAAGCTTGACAAAGATGAAAAAGGTAAGTGTGTGGATATAAAGACTTATCGAGGTATGATCGGATCTTTACTTTATTTGACCGCTAGTAGACCCGATATCATGTTTAGTGTATGTCTTTGTGCTAGATTTCAATCTTGTCCTAAAGAATCACATTTCCATGCCGTTAAAAGGATACTTAAATATTTGCTTGGAACTATTGATGTTGGATTATGGTATCCTAGAAATGTTGAGTTTAATTTGGTAGGATATTCCGATGCGGACTTTGCCGGTAGTTTACTTGACCGTAAAAGTACTAGTGGGACTTGTCAATTTCTTGGTAGTTCCTTAGTATCTTGGTTTAGTAAAAAGCAAAATTCGGTTGCCTTATCCACTACCGAAGCGGAATATATTGCGGTTGCTAGTTGTTGTGCACAAATTCTTTGGATGAAACAAACTCTTTGTGATTTTGGATTAAAATTTGATAATGTGCCTATATTTTGTGATAATACTAGTGCCATAAATTTGACTAAGAATCCTATTCATCATTCTAGAACTAAGCATATAGATATTAGGCATCACTTTATTAGAGAGCATGTACAAAATGGTCATATTACTCTTGAGTTTGTAAGCTCCAATAATCAATTAGCGGATATATTTACCAAGCCTTTGAGTGAAGAAAGCTTTTGTAAAAATAGGCTTGAGCTTGGAATTATTCGTTGGGATGCATCTTGA

mRNA sequence

ATGGACATAAAGCTTATTCTTGTTACCTATCTAGATCTAGTGCCTGTTTGTTTGAAAGCCTCCAAGAAAAACAAATGGTACTTGGATAGTGGTTGCTCAAGACACATGACGGGAGACCGATCCAAGCTTATCTCTTTCTCCAAAAAGAATGGAGGCATGGTAACCTTTGGTGACAACAAGAAAGGTAAAATAATTGGTAAGGGTAATATAGGAAATGATTCATCTACTTTGATTGAAAATGTTCATTTGGTTGATGGTTTAAAGCATGATTTGCTTAGTATTAGTCAATTGGATGAAAATGTGTACACTCTTGATTTGAATGATTATCCTATTATTGATAAATGTCTTTCGGTTTTGCATAATGATTCTTGGTTATGGCATAGAAGACTAGGACATGCTAGCATGCACTTAATTTCAAATATTTCTAAAAATTGTTTGGTTAGAGGTCTTCCTAGTTTTAAATTTGAAAAAGACAAAGTTTGTGATGCTTGTCAAATGGGTAAGCAAACTAAGTCCTCTTTCAAATCTAAAAATGTGATCTCTACTACTAGACCCTTACAACTATTACACATGGACTTATTTGGCCCTTCTAGAATTGCTAGTTATGGAGGAAATTATTATGCTTTTGTGATAGTTGATGATTTTTCTAGATTTACTTGGGTTTTGATGATAAAACATAAGGATGATGCTTTGAAAAGTTTTATTAGTTTTGCAAAAAGAGTACAAAATGAAAAAGGATTTTTTATTTCCAAAATTAGGAGTGATCACGGAGGAGAATTTGATAATGATGCTTTTAAAGCTTTTTGTGAAGAAAATGGTTTTTCCCATAATTTTTCCTCTCCAAGAACTCCTCAACAAAATGGTGTAGTTGAAAGGAAAAATCGTACTTTGCAAGAATTTGCTAGATCAATGTTGAATGAGTATGGTTTACCTAAATATTTTTGGACGGAAGCCGTTAACACCGCTTGCTATGTTTCAAATAGAGTTTTAGTTAGACCCTCTTTAGATAAAACTCCTTATGAACTTTGGCATGGAAAAATTCCAAATATTGGGTATTTCAAAGTTTTCGGTTGTAAATGTTTTATTTTGAATAACAAAGAAAAACTTGGAAAATTTGATTCTAAGACGGATGTTGGTATTTTTCTAGGATATTCCTCTACTAGTAAAGCTTATAGAGTTTTCAATAAGAAAACTTTAGTTATTGAGGAATCTATTCATGTTGTATTTGATGAATCTTGGAATAATGTTTCTAATGAGTCTATTTGTAGTGATGATTTAGAAAAAGATTTTGGAGATTTACTTGTTAATGACAAAGGCAAAGAAATTGTTCCAAGTATGCAAGATGTGAACATCATAGAAAAGAAAGAAGAGGGTTCTTCATCCTTGCCTAAAGAGTGGAGATATGCTCTATCCCATCCCAAGGATCTAATTCTTGGCAATCCCGAACAAGGTGTCAAAACTCGTTCTTCTCTTAATTTATTTAGTAATCTTGCTTTTGTGTCTCAAATTGAACCTAGAAGTTTTAAAGATGCCGAATGTGATGAGTTTTGGATTTTAGCTATGCAAGAAGAATTAAATCAATTTGAAAGAAACAAAGTTTGGAAATTAGTCCCTAGGCCTTCTAATGCATCTATAATCGGAACTAAATGGGTTTTTAGAAATAAGATGGATGAAAATGGAAATATCATTAGAAATAAAGCTAGACTTGTAGCTCAAGGTTATTGTCAAGAAGAAGGTATAGATTATGAAGAGACTTTTGCACCGGTTGCTAGATTAGAAGCTATTAGAATGTTGCTTGCTTTTGCTTCTTATAAAAATTTCATTTTGTATCAAATGGATGTAAAAAGTGCTTTTTTAAACGGTTATATTGTAGAGGAAGTTTACGTAGAACAACCTCCGGGTTTTGAAAGTTTTGATTTACCTAATCATGTTTATAAGTTGAAAAAGGCTCTTTATGGCTTAAAACAAGCTCCAAGAGCTTGGTATGATAGACTTAGCAAGTTTTTACTTGAGAATGACTTTAAGATGGGAAAAATTGATAATACTCTATTTATTAAAGTTAAAAATAATGACATGCTTATAGTACAAATTTATGTGGATGATATTATATTTGGTTCTACTAATTCATCTTTGTGTGAAGAATTTTCCAAGTGTATGCATAATGAGTTTGAGATGAGTATGATGGGAGAACTTAGTTTCTTCCTTGGTCTTCAAATCAAACAACTCAAGGATGGCATCTTCATAAGTCAAGAAAAATACACAAGGGATTTGCTCAAGAAATTCAAATTAAATGAAGGTAAAGTTGCAAAAACTCCTATGAGCACTACCACTAAGCTTGACAAAGATGAAAAAGGTAAGTGTGTGGATATAAAGACTTATCGAGGTATGATCGGATCTTTACTTTATTTGACCGCTAGTAGACCCGATATCATGTTTAGTGTATGTCTTTGTGCTAGATTTCAATCTTGTCCTAAAGAATCACATTTCCATGCCGTTAAAAGGATACTTAAATATTTGCTTGGAACTATTGATGTTGGATTATGGTATCCTAGAAATGTTGAGTTTAATTTGGTAGGATATTCCGATGCGGACTTTGCCGGTAGTTTACTTGACCGTAAAAGTACTAGTGGGACTTGTCAATTTCTTGGTAGTTCCTTAGTATCTTGGTTTAGTAAAAAGCAAAATTCGGTTGCCTTATCCACTACCGAAGCGGAATATATTGCGGTTGCTAGTTGTTGTGCACAAATTCTTTGGATGAAACAAACTCTTTGTGATTTTGGATTAAAATTTGATAATGTGCCTATATTTTGTGATAATACTAGTGCCATAAATTTGACTAAGAATCCTATTCATCATTCTAGAACTAAGCATATAGATATTAGGCATCACTTTATTAGAGAGCATGTACAAAATGGTCATATTACTCTTGAGTTTGTAAGCTCCAATAATCAATTAGCGGATATATTTACCAAGCCTTTGAGTGAAGAAAGCTTTTGTAAAAATAGGCTTGAGCTTGGAATTATTCGTTGGGATGCATCTTGA

Coding sequence (CDS)

ATGGACATAAAGCTTATTCTTGTTACCTATCTAGATCTAGTGCCTGTTTGTTTGAAAGCCTCCAAGAAAAACAAATGGTACTTGGATAGTGGTTGCTCAAGACACATGACGGGAGACCGATCCAAGCTTATCTCTTTCTCCAAAAAGAATGGAGGCATGGTAACCTTTGGTGACAACAAGAAAGGTAAAATAATTGGTAAGGGTAATATAGGAAATGATTCATCTACTTTGATTGAAAATGTTCATTTGGTTGATGGTTTAAAGCATGATTTGCTTAGTATTAGTCAATTGGATGAAAATGTGTACACTCTTGATTTGAATGATTATCCTATTATTGATAAATGTCTTTCGGTTTTGCATAATGATTCTTGGTTATGGCATAGAAGACTAGGACATGCTAGCATGCACTTAATTTCAAATATTTCTAAAAATTGTTTGGTTAGAGGTCTTCCTAGTTTTAAATTTGAAAAAGACAAAGTTTGTGATGCTTGTCAAATGGGTAAGCAAACTAAGTCCTCTTTCAAATCTAAAAATGTGATCTCTACTACTAGACCCTTACAACTATTACACATGGACTTATTTGGCCCTTCTAGAATTGCTAGTTATGGAGGAAATTATTATGCTTTTGTGATAGTTGATGATTTTTCTAGATTTACTTGGGTTTTGATGATAAAACATAAGGATGATGCTTTGAAAAGTTTTATTAGTTTTGCAAAAAGAGTACAAAATGAAAAAGGATTTTTTATTTCCAAAATTAGGAGTGATCACGGAGGAGAATTTGATAATGATGCTTTTAAAGCTTTTTGTGAAGAAAATGGTTTTTCCCATAATTTTTCCTCTCCAAGAACTCCTCAACAAAATGGTGTAGTTGAAAGGAAAAATCGTACTTTGCAAGAATTTGCTAGATCAATGTTGAATGAGTATGGTTTACCTAAATATTTTTGGACGGAAGCCGTTAACACCGCTTGCTATGTTTCAAATAGAGTTTTAGTTAGACCCTCTTTAGATAAAACTCCTTATGAACTTTGGCATGGAAAAATTCCAAATATTGGGTATTTCAAAGTTTTCGGTTGTAAATGTTTTATTTTGAATAACAAAGAAAAACTTGGAAAATTTGATTCTAAGACGGATGTTGGTATTTTTCTAGGATATTCCTCTACTAGTAAAGCTTATAGAGTTTTCAATAAGAAAACTTTAGTTATTGAGGAATCTATTCATGTTGTATTTGATGAATCTTGGAATAATGTTTCTAATGAGTCTATTTGTAGTGATGATTTAGAAAAAGATTTTGGAGATTTACTTGTTAATGACAAAGGCAAAGAAATTGTTCCAAGTATGCAAGATGTGAACATCATAGAAAAGAAAGAAGAGGGTTCTTCATCCTTGCCTAAAGAGTGGAGATATGCTCTATCCCATCCCAAGGATCTAATTCTTGGCAATCCCGAACAAGGTGTCAAAACTCGTTCTTCTCTTAATTTATTTAGTAATCTTGCTTTTGTGTCTCAAATTGAACCTAGAAGTTTTAAAGATGCCGAATGTGATGAGTTTTGGATTTTAGCTATGCAAGAAGAATTAAATCAATTTGAAAGAAACAAAGTTTGGAAATTAGTCCCTAGGCCTTCTAATGCATCTATAATCGGAACTAAATGGGTTTTTAGAAATAAGATGGATGAAAATGGAAATATCATTAGAAATAAAGCTAGACTTGTAGCTCAAGGTTATTGTCAAGAAGAAGGTATAGATTATGAAGAGACTTTTGCACCGGTTGCTAGATTAGAAGCTATTAGAATGTTGCTTGCTTTTGCTTCTTATAAAAATTTCATTTTGTATCAAATGGATGTAAAAAGTGCTTTTTTAAACGGTTATATTGTAGAGGAAGTTTACGTAGAACAACCTCCGGGTTTTGAAAGTTTTGATTTACCTAATCATGTTTATAAGTTGAAAAAGGCTCTTTATGGCTTAAAACAAGCTCCAAGAGCTTGGTATGATAGACTTAGCAAGTTTTTACTTGAGAATGACTTTAAGATGGGAAAAATTGATAATACTCTATTTATTAAAGTTAAAAATAATGACATGCTTATAGTACAAATTTATGTGGATGATATTATATTTGGTTCTACTAATTCATCTTTGTGTGAAGAATTTTCCAAGTGTATGCATAATGAGTTTGAGATGAGTATGATGGGAGAACTTAGTTTCTTCCTTGGTCTTCAAATCAAACAACTCAAGGATGGCATCTTCATAAGTCAAGAAAAATACACAAGGGATTTGCTCAAGAAATTCAAATTAAATGAAGGTAAAGTTGCAAAAACTCCTATGAGCACTACCACTAAGCTTGACAAAGATGAAAAAGGTAAGTGTGTGGATATAAAGACTTATCGAGGTATGATCGGATCTTTACTTTATTTGACCGCTAGTAGACCCGATATCATGTTTAGTGTATGTCTTTGTGCTAGATTTCAATCTTGTCCTAAAGAATCACATTTCCATGCCGTTAAAAGGATACTTAAATATTTGCTTGGAACTATTGATGTTGGATTATGGTATCCTAGAAATGTTGAGTTTAATTTGGTAGGATATTCCGATGCGGACTTTGCCGGTAGTTTACTTGACCGTAAAAGTACTAGTGGGACTTGTCAATTTCTTGGTAGTTCCTTAGTATCTTGGTTTAGTAAAAAGCAAAATTCGGTTGCCTTATCCACTACCGAAGCGGAATATATTGCGGTTGCTAGTTGTTGTGCACAAATTCTTTGGATGAAACAAACTCTTTGTGATTTTGGATTAAAATTTGATAATGTGCCTATATTTTGTGATAATACTAGTGCCATAAATTTGACTAAGAATCCTATTCATCATTCTAGAACTAAGCATATAGATATTAGGCATCACTTTATTAGAGAGCATGTACAAAATGGTCATATTACTCTTGAGTTTGTAAGCTCCAATAATCAATTAGCGGATATATTTACCAAGCCTTTGAGTGAAGAAAGCTTTTGTAAAAATAGGCTTGAGCTTGGAATTATTCGTTGGGATGCATCTTGA

Homology

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BLAST of CSPI06G12950 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 8.7e-142
Identity = 320/911 (35.13%), Postives = 486/911 (53.35%), Query Frame = 1


Query: 125  LWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVCDACQMGKQTKSSFKSKNVISTTR 184
            LWH+R+GH S   +  ++K  L+      K    K CD C  GKQ + SF++ +      
Sbjct: 424  LWHKRMGHMSEKGLQILAKKSLISYA---KGTTVKPCDYCLFGKQHRVSFQTSSE-RKLN 483

Query: 185  PLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWVLMIKHKDDALKSFISFAKRVQNE 244
             L L++ D+ GP  I S GGN Y    +DD SR  WV ++K KD   + F  F   V+ E
Sbjct: 484  ILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERE 543

Query: 245  KGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSPRTPQQNGVVERKNRTLQEFARSM 304
             G  + ++RSD+GGE+ +  F+ +C  +G  H  + P TPQ NGV ER NRT+ E  RSM
Sbjct: 544  TGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSM 603

Query: 305  LNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYELWHGKIPNIGYFKVFGCKCFILN 364
            L    LPK FW EAV TACY+ NR    P   + P  +W  K  +  + KVFGC+ F   
Sbjct: 604  LRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHV 663

Query: 365  NKEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVIEESIHVVFDESWNNVSNESICSD 424
             KE+  K D K+   IF+GY      YR+++     +  S  VVF ES   V   +  S+
Sbjct: 664  PKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRES--EVRTAADMSE 723

Query: 425  DLEKDFGDLLVNDKGKEIVPSMQDVNIIEKKEEGSSSLPKEWRYALSHPKDLILG----- 484
             ++       V        P+  +    E  E+G    P E    +   + L  G     
Sbjct: 724  KVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQ--PGE---VIEQGEQLDEGVEEVE 783

Query: 485  NPEQGVKTRSSL----------NLFSNLAFV---SQIEPRSFKDA----ECDEFWILAMQ 544
            +P QG +    L            + +  +V      EP S K+     E ++  + AMQ
Sbjct: 784  HPTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQL-MKAMQ 843

Query: 545  EELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDY 604
            EE+   ++N  +KLV  P     +  KWVF+ K D +  ++R KARLV +G+ Q++GID+
Sbjct: 844  EEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDF 903

Query: 605  EETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPN 664
            +E F+PV ++ +IR +L+ A+  +  + Q+DVK+AFL+G + EE+Y+EQP GFE     +
Sbjct: 904  DEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKH 963

Query: 665  HVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIK-VKNNDMLIVQIYVDD 724
             V KL K+LYGLKQAPR WY +   F+    +     D  ++ K    N+ +I+ +YVDD
Sbjct: 964  MVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDD 1023

Query: 725  IIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQI--KQLKDGIFISQEKYTRDLLK 784
            ++    +  L  +    +   F+M  +G     LG++I  ++    +++SQEKY   +L+
Sbjct: 1024 MLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLE 1083

Query: 785  KFKLNEGKVAKTPMSTTTKLDK-------DEKGKCVDIKTYRGMIGSLLY-LTASRPDIM 844
            +F +   K   TP++   KL K       +EKG    +  Y   +GSL+Y +  +RPDI 
Sbjct: 1084 RFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKV-PYSSAVGSLMYAMVCTRPDIA 1143

Query: 845  FSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLD 904
             +V + +RF   P + H+ AVK IL+YL GT    L +  +    L GY+DAD AG + +
Sbjct: 1144 HAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPI-LKGYTDADMAGDIDN 1203

Query: 905  RKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFD 964
            RKS++G         +SW SK Q  VALSTTEAEYIA      +++W+K+ L + GL   
Sbjct: 1204 RKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQK 1263

Query: 965  NVPIFCDNTSAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTK 1001
               ++CD+ SAI+L+KN ++H+RTKHID+R+H+IRE V +  + +  +S+N   AD+ TK
Sbjct: 1264 EYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTK 1320

[Close]

BLAST of CSPI06G12950 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 369.0 bits (946), Expect = 1.7e-100
Identity = 203/520 (39.04%), Postives = 315/520 (60.58%), Query Frame = 1


Query: 505  PRSFKDAECDE---FWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGN 564
            P SF + +  +    W  A+  ELN  + N  W +  RP N +I+ ++WVF  K +E GN
Sbjct: 891  PNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGN 950

Query: 565  IIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNG 624
             IR KARLVA+G+ Q+  IDYEETFAPVAR+ + R +L+     N  ++QMDVK+AFLNG
Sbjct: 951  PIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNG 1010

Query: 625  YIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDN 684
             + EE+Y+  P G       ++V KL KA+YGLKQA R W++   + L E +F    +D 
Sbjct: 1011 TLKEEIYMRLPQGISCNS--DNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDR 1070

Query: 685  TLFIKVKN--NDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQI 744
             ++I  K   N+ + V +YVDD++  + + +    F + +  +F M+ + E+  F+G++I
Sbjct: 1071 CIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI 1130

Query: 745  KQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKT-YRGMIG 804
            +  +D I++SQ  Y + +L KF +       TP+   +K++ +      D  T  R +IG
Sbjct: 1131 EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPL--PSKINYELLNSDEDCNTPCRSLIG 1190

Query: 805  SLLY-LTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEF-- 864
             L+Y +  +RPD+  +V + +R+ S      +  +KR+L+YL GTID+ L + +N+ F  
Sbjct: 1191 CLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFEN 1250

Query: 865  NLVGYSDADFAGSLLDRKSTSG-TCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCA 924
             ++GY D+D+AGS +DRKST+G   +    +L+ W +K+QNSVA S+TEAEY+A+     
Sbjct: 1251 KIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVR 1310

Query: 925  QILWMKQTLCDFGLKFDN-VPIFCDNTSAINLTKNPIHHSRTKHIDIRHHFIREHVQNGH 984
            + LW+K  L    +K +N + I+ DN   I++  NP  H R KHIDI++HF RE VQN  
Sbjct: 1311 EALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNV 1370

Query: 985  ITLEFVSSNNQLADIFTKPLSEESFCKNRLELGIIRWDAS 1014
            I LE++ + NQLADIFTKPL    F + R +LG+++ D S
Sbjct: 1371 ICLEYIPTENQLADIFTKPLPAARFVELRDKLGLLQDDQS 1406

[Close]

BLAST of CSPI06G12950 vs. Swiss-Prot
Match: YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2)

HSP 1 Score: 152.9 bits (385), Expect = 1.9e-35
Identity = 95/309 (30.74%), Postives = 165/309 (53.40%), Query Frame = 1


Query: 612 MDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQAPRAWYDRLSKFLLE 671
           MDV +AFLN  + E +YV+QPPGF +   P++V++L   +YGLKQAP  W + ++  L +
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 672 NDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGEL 731
             F   + ++ L+ +  ++  + + +YVDD++  + +  + +   + +   + M  +G++
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 732 SFFLGLQIKQLKDG-IFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDI 791
             FLGL I Q  +G I +S + Y      + ++N  K+ +TP+  +  L +       DI
Sbjct: 121 DKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180

Query: 792 KTYRGMIGSLLY-LTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWY 851
             Y+ ++G LL+     RPDI + V L +RF   P+  H  + +R+L+YL  T  + L Y
Sbjct: 181 TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240

Query: 852 PRNVEFNLVGYSDADFAGSLLD-RKSTSGTCQFLGSSLVSWFSKK-QNSVALSTTEAEYI 911
               +  L  Y DA   G++ D   ST G    L  + V+W SKK +  + + +TEAEYI
Sbjct: 241 RSGSQLALTVYCDASH-GAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYI 300

Query: 912 AVASCCAQI 917
             +    +I
Sbjct: 301 TASETVMEI 308

[Close]

BLAST of CSPI06G12950 vs. Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 2.7e-34
Identity = 81/225 (36.00%), Postives = 132/225 (58.67%), Query Frame = 1


Query: 697 IYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRD 756
           +YVDDI+   ++++L       + + F M  +G + +FLG+QIK    G+F+SQ KY   
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 757 LLKKFKLNEGKVAKTPMSTTTKLDKDEK---GKCVDIKTYRGMIGSLLYLTASRPDIMFS 816
           +L     N G +   PMST   L  +      K  D   +R ++G+L YLT +RPDI ++
Sbjct: 65  ILN----NAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYA 124

Query: 817 VCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRK 876
           V +  +    P  + F  +KR+L+Y+ GTI  GL+  +N + N+  + D+D+AG    R+
Sbjct: 125 VNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRR 184

Query: 877 STSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILW 919
           ST+G C FLG +++SW +K+Q +V+ S+TE EY A+A   A++ W
Sbjct: 185 STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of CSPI06G12950 vs. Swiss-Prot
Match: YH41B_YEAST (Transposon Ty4-H Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY4B-H PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.5e-32
Identity = 134/505 (26.53%), Postives = 230/505 (45.54%), Query Frame = 1


Query: 520  AMQEELNQFERNKVWKLVPRPSNASI-----IGTKWVFRNKMDENGNIIRNKARLVAQGY 579
            A  +EL   +  KV+ +  + S + I     + T  +F  K   NG     KAR+V +G 
Sbjct: 1291 AYHKELQNLKDMKVFDVDVKYSRSEIPDNLIVPTNTIFTKK--RNGIY---KARIVCRGD 1350

Query: 580  CQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPG 639
             Q     Y            I++ L  A+ +N  +  +D+  AFL   + EE+Y+  P  
Sbjct: 1351 TQSPDT-YSVITTESLNHNHIKIFLMIANNRNMFMKTLDINHAFLYAKLEEEIYIPHPHD 1410

Query: 640  FESFDLPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLI 699
                     V KL KALYGLKQ+P+ W D L ++L     K       L+     N  L+
Sbjct: 1411 RRC------VVKLNKALYGLKQSPKEWNDHLRQYLNGIGLKDNSYTPGLYQTEDKN--LM 1470

Query: 700  VQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGEL------SFFLGLQIKQLK--DGI 759
            + +YVDD +  ++N    +EF   + + FE+ + G L      +  LG+ +   K    I
Sbjct: 1471 IAVYVDDCVIAASNEQRLDEFINKLKSNFELKITGTLIDDVLDTDILGMDLVYNKRLGTI 1530

Query: 760  FISQEKYTRDLLKKFKLNEGKVAKT--PMSTTTKLDKDEKGKCVDIKTYR-------GMI 819
             ++ + +   + KK+     K+ K+  P  +T K+D  +    +  + +R        ++
Sbjct: 1531 DLTLKSFINRMDKKYNEELKKIRKSSIPHMSTYKIDPKKDVLQMSEEEFRQGVLKLQQLL 1590

Query: 820  GSLLYLT-ASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPR--NVE 879
            G L Y+    R DI F+V   AR  + P E  F+ + +I++YL+   D+G+ Y R  N +
Sbjct: 1591 GELNYVRHKCRYDINFAVKKVARLVNYPHERVFYMIYKIIQYLVRYKDIGIHYDRDCNKD 1650

Query: 880  FNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCA 939
              ++  +DA   GS  D +S  G   + G ++ + +S K  +  +S+TEAE  A+    A
Sbjct: 1651 KKVIAITDAS-VGSEYDAQSRIGVILWYGMNIFNVYSNKSTNRCVSSTEAELHAIYEGYA 1710

Query: 940  QILWMKQTLCDFGLKFDN-VPIFCDNTSAINLTKNPIHHSRTKHIDIRHHFIREHVQNGH 999
                +K TL + G   +N + +  D+  AI          + K   I+   I+E ++   
Sbjct: 1711 DSETLKVTLKELGEGDNNDIVMITDSKPAIQGLNRSYQQPKEKFTWIKTEIIKEKIKEKS 1770

[Close]

BLAST of CSPI06G12950 vs. TrEMBL
Match: A5C8K0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001808 PE=4 SV=1)

HSP 1 Score: 1303.5 bits (3372), Expect = 0.0e+00
Identity = 654/1027 (63.68%), Postives = 779/1027 (75.85%), Query Frame = 1


Query: 12   DLVPVCLKASKKNKWYLDSGCSRHMTGDRSKLISFSKKNGGMVTFGDNKKGKIIGKGNIG 71
            +++    K SK++KW+LDSGCSRHMTGD SK    +K+ GG VTFGDN KG+IIG+GNIG
Sbjct: 460  EMILASQKCSKEDKWFLDSGCSRHMTGDESKFAFLTKRKGGYVTFGDNAKGRIIGQGNIG 519

Query: 72   NDSSTLIENVHLVDGLKHD---------------------LLSISQLD---------ENV 131
            N +S+LIE+V LVDGLKH+                     ++   Q D         ENV
Sbjct: 520  NGTSSLIESVLLVDGLKHNLLSISQLCNKGFKVIFEASHCIIKDIQNDKTIFMGHRCENV 579

Query: 132  YTLDLNDYPIIDKCLSVLHNDSWLWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVC 191
            Y ++++ Y   D+C S +H+ SWLWHRRLGHA+M LIS ++K+ LVRGLP   F+KDK+C
Sbjct: 580  YAINISKYDGHDRCFSSMHDQSWLWHRRLGHANMDLISQLNKDELVRGLPKINFQKDKIC 639

Query: 192  DACQMGKQTKSSFKSKNVISTTRPLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWV 251
            +ACQMGKQ K+SFK+KN IST+RPL+LLHMDLFGPSR  S GG  YA+VIVDDFSR+TWV
Sbjct: 640  EACQMGKQIKNSFKNKNFISTSRPLELLHMDLFGPSRTPSLGGKSYAYVIVDDFSRYTWV 699

Query: 252  LMIKHKDDALKSFISFAKRVQNEKGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSP 311
            L +  K +A   F  F  +VQNEKGF I+ IRSDHG EF+N  F+ +C + G +HNF +P
Sbjct: 700  LFLSQKSEAFYEFSKFCNKVQNEKGFSITCIRSDHGREFENFDFEEYCNKYGINHNFLAP 759

Query: 312  RTPQQNGVVERKNRTLQEFARSMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYE 371
            RT QQNGVVERKNRTLQE AR+MLNE  LPKYFW EA+NT+CYV NR+L+RP L KTPYE
Sbjct: 760  RTSQQNGVVERKNRTLQEMARTMLNENNLPKYFWAEAINTSCYVLNRILLRPILKKTPYE 819

Query: 372  LWHGKIPNIGYFKVFGCKCFILNNKEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVI 431
            LW  K PNI YFKVFGCKCFILN K+ LGKFD+K+DVGIFLGYS++SKA+RVFNK+T+V+
Sbjct: 820  LWKNKKPNISYFKVFGCKCFILNTKDNLGKFDAKSDVGIFLGYSTSSKAFRVFNKRTMVV 879

Query: 432  EESIHVVFDESWNNVSNESICSDDLEKDFGDLLVNDKGKEIVPSMQDVNIIEKKEEGSSS 491
            EESIH  +   W N    +       KD      N K  E +P        +K       
Sbjct: 880  EESIH-DWRLPWENCKLRT-------KD------NKKKVERIPR-------KKNHLWHYL 939

Query: 492  LPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILA 551
            L  + ++ ++HP+D I+GNP  GV+TRSSL N+ +NLAF+SQIEP++ KDA  DE W++A
Sbjct: 940  LLNKCKFVINHPQDQIIGNPLSGVRTRSSLRNICNNLAFISQIEPKNIKDAIVDENWMIA 999

Query: 552  MQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGI 611
            MQ+ELNQFER++VW+LVPRPSN S+IGTKWVFRNKMDENG I+RNKARLVAQGY QEEGI
Sbjct: 1000 MQKELNQFERSEVWELVPRPSNQSVIGTKWVFRNKMDENGIIVRNKARLVAQGYNQEEGI 1059

Query: 612  DYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDL 671
            DYEETFAPVARLEAIRMLLAFA +K+FILYQMDVKSAFLNG+I EE+YVEQPPGF+SF+ 
Sbjct: 1060 DYEETFAPVARLEAIRMLLAFACFKDFILYQMDVKSAFLNGFINEEIYVEQPPGFQSFNF 1119

Query: 672  PNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVD 731
            PNHV+KLKKALYGLKQAPRAWY+RLSKFLL+  FKMGKID TLFIK K NDML+VQIYVD
Sbjct: 1120 PNHVFKLKKALYGLKQAPRAWYERLSKFLLKKSFKMGKIDTTLFIKTKENDMLLVQIYVD 1179

Query: 732  DIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKK 791
            DI FG+TN SLCE+FSKCMH                               KY +DLLK+
Sbjct: 1180 DITFGATNDSLCEDFSKCMHT------------------------------KYIKDLLKR 1239

Query: 792  FKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARF 851
            F + E KV KTPMS++ KLD DEKGK +D   YRGMIGSLLYLTASRPDIM+SVCLCARF
Sbjct: 1240 FNMGEAKVMKTPMSSSIKLDMDEKGKSIDSTMYRGMIGSLLYLTASRPDIMYSVCLCARF 1299

Query: 852  QSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQ 911
            QSCPKESH  AVKRIL+YL GT+ +GLWYP+   F L+G+SDADFAG  ++RKSTSGTC 
Sbjct: 1300 QSCPKESHLSAVKRILRYLKGTMSIGLWYPKGDNFELIGFSDADFAGCRVERKSTSGTCH 1359

Query: 912  FLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNT 971
             LG SLVSW SKKQNS+ALST EAEY A + C AQILWMKQTL DF L F++VPI CDNT
Sbjct: 1360 SLGHSLVSWHSKKQNSIALSTAEAEYTAASLCYAQILWMKQTLSDFNLSFEHVPIKCDNT 1419

Query: 972  SAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCK 1008
            SAIN++KNP+ HSRTKHI+IRHHF+R+H Q G ITLEFVS+ +QLADIFTKPLSEE F  
Sbjct: 1420 SAINISKNPVQHSRTKHIEIRHHFLRDHAQKGDITLEFVSTKDQLADIFTKPLSEEQFSD 1435

[Close]

BLAST of CSPI06G12950 vs. TrEMBL
Match: A0A151UHG7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_048795 PE=4 SV=1)

HSP 1 Score: 1297.0 bits (3355), Expect = 0.0e+00
Identity = 653/1027 (63.58%), Postives = 781/1027 (76.05%), Query Frame = 1


Query: 17   CLKASKKNKWYLDSGCSRHMTGDRSKLISFSKKNGGMVTFGDNKKGKIIGKGNIGNDSS- 76
            CL+A K   WYLDSGCSRHMTGD SK  +   KN G VT+GDN KGKI+G GN+GN SS 
Sbjct: 537  CLRA-KNLLWYLDSGCSRHMTGDPSKFTNLKLKNEGYVTYGDNNKGKILGHGNVGNPSSQ 596

Query: 77   TLIENVHLVDGLKHDLLSISQLD------------------------------ENVYTLD 136
            TLIENV LVDGLKH+LLSISQL                               +N+Y LD
Sbjct: 597  TLIENVLLVDGLKHNLLSISQLSDKGFKIEFDNTCCLICDKKSKEIRFIGKRIDNIYMLD 656

Query: 137  LNDYPIID--KCLSVLHNDSWLWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVCDA 196
            L     +   KCL     + WLWHRR  H  M  ++ + +  LV GLP  KF KDK+CDA
Sbjct: 657  LEHSITMSNTKCLITQEENIWLWHRRAAHIHMDHLNKLCRKELVVGLPKLKFGKDKLCDA 716

Query: 197  CQMGKQTKSSFKSKNVISTTRPLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWVLM 256
            CQ GKQ K+SFKSKN IST+RPLQL+HMDLFGPSR  S GGNYY  VIVDD+SR+TWV+ 
Sbjct: 717  CQKGKQVKASFKSKNQISTSRPLQLIHMDLFGPSRTMSLGGNYYGLVIVDDYSRYTWVMF 776

Query: 257  IKHKDDALKSFISFAKRVQNEKGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSPRT 316
            + +K+DA  +F  FAK VQNEK   I+ IRSDHGGEF N  F+ FCEE+G +HNFS+PRT
Sbjct: 777  LANKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNILFQKFCEEHGINHNFSAPRT 836

Query: 317  PQQNGVVERKNRTLQEFARSMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYELW 376
            PQQNGVVERKNR+L+E AR+MLNE  LPKYFW +A+NTAC+V N+VL+RP L KTPYE++
Sbjct: 837  PQQNGVVERKNRSLEELARTMLNETNLPKYFWADAINTACHVLNKVLIRPILKKTPYEIY 896

Query: 377  HGKIPNIGYFKVFGCKCFILNN-KEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVIE 436
             GK PNI YF+VFGCKC++LNN KE+LGKFD+K D  IFLGYS+ SKAYR++NK+TLV+E
Sbjct: 897  KGKKPNISYFRVFGCKCYVLNNGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVE 956

Query: 437  ESIHVVFDESWNNVSNESICSDDLEKDFGDLLVNDKGKEIVPSMQDVNIIEKKEEGSSSL 496
            ES+HVVFDES N         +DL +     L+ ++  E+    +    +EK +E    L
Sbjct: 957  ESVHVVFDES-NKQETRQTEIEDLNELLDQSLLENEPNEVPKESES---LEKAKETCEQL 1016

Query: 497  PKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAM 556
            PKEW+ +     D I+GN  +GV TRS++ N+ + +AFVSQ+EP++  +A  DE W++AM
Sbjct: 1017 PKEWKTSRDLSMDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMAM 1076

Query: 557  QEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGID 616
            QEELNQFERN+VW LVP P +  IIGTKWVFRNK+DE+G I+RNKARLVA+GY QEEGID
Sbjct: 1077 QEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGID 1136

Query: 617  YEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLP 676
            Y+ETFAPVAR+EAIR+LLA++S KNF LYQMDVKSAFLNG+I EEVYVEQPPGF  +  P
Sbjct: 1137 YDETFAPVARIEAIRLLLAYSSIKNFKLYQMDVKSAFLNGFIQEEVYVEQPPGFVDYKNP 1196

Query: 677  NHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDD 736
            NHVYKLKKALYGLKQAPR+WYDRLSKFL+END++ GK+DNTLF+K   ND + VQIYVDD
Sbjct: 1197 NHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKVDNTLFVKKFKNDTMYVQIYVDD 1256

Query: 737  IIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKF 796
            I+FGSTN+SLC+EF+K M  EFEMSMMGEL+FFLGLQIKQ+ DGIFISQ KY  +LLKKF
Sbjct: 1257 IVFGSTNTSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMHDGIFISQSKYCNELLKKF 1316

Query: 797  KLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQ 856
             +   K A TP+S    LD DEKG  VD   YRG+IGSLLYLTASRPDIMF+VCLCARFQ
Sbjct: 1317 GMEGCKEAATPISNNCNLDLDEKGIAVDSSKYRGIIGSLLYLTASRPDIMFAVCLCARFQ 1376

Query: 857  SCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQF 916
            + PKESH  +VKRILKYL GT +VGLWYP+ V  +L+GYSD+D+AG  LDRKSTSGTC  
Sbjct: 1377 ANPKESHMKSVKRILKYLKGTTNVGLWYPKGVSLSLIGYSDSDYAGCRLDRKSTSGTCHL 1436

Query: 917  LGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTS 976
            LGS+LVSW SKKQ  VALST EAEYIA  SCCAQILWMKQ L D+G++ + +P+ CDNTS
Sbjct: 1437 LGSALVSWHSKKQACVALSTAEAEYIAAGSCCAQILWMKQQLRDYGVELNKIPLRCDNTS 1496

Query: 977  AINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKN 1009
            AINLTKNPI HSRTKHI+IRHHF+R+HVQ     +EFV ++ QLADIFTKPL  E F   
Sbjct: 1497 AINLTKNPILHSRTKHIEIRHHFLRDHVQRNDCVVEFVETSKQLADIFTKPLPRERFNNL 1556

[Close]

BLAST of CSPI06G12950 vs. TrEMBL
Match: A0A151RY83_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_030937 PE=4 SV=1)

HSP 1 Score: 1293.5 bits (3346), Expect = 0.0e+00
Identity = 658/1030 (63.88%), Postives = 778/1030 (75.53%), Query Frame = 1


Query: 18   LKASKKNKWYLDSGCSRHMTGDRSKLISFSKKNGGMVTFGDNKKGKIIGKGNIGNDSS-T 77
            L  +K   WYLDSGCSRHMTGD SK  S   KN G VT+GDN KGKI+G GN+GN SS T
Sbjct: 542  LLRAKNLLWYLDSGCSRHMTGDPSKFSSLKLKNEGYVTYGDNNKGKILGHGNVGNSSSQT 601

Query: 78   LIENVHLVDGLKHDLLSISQLD------------------------------ENVYTLDL 137
            LIENV LVDGLKH+LLSISQL                               +N+Y LDL
Sbjct: 602  LIENVLLVDGLKHNLLSISQLSDKGFKIEFDDTCCLICDKRSKEIRFIGKRIDNIYMLDL 661

Query: 138  NDYPIID--KCLSVLHNDSWLWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVCDAC 197
                 +   KCL      +WLWHRR  H  M  ++ +S+  LV GLP  KF KDK+CDAC
Sbjct: 662  EHSISMSNTKCLITQEESTWLWHRRAAHIHMDHLNKLSRKELVVGLPKLKFGKDKLCDAC 721

Query: 198  QMGKQTKSSFKSKNVISTTRPLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWVLMI 257
            Q GKQ K+SFKSKN IST+RPLQL+HMDLFGPSR  S GGNYY  VIVDD+SR+TWV+ +
Sbjct: 722  QKGKQVKASFKSKNQISTSRPLQLIHMDLFGPSRTMSLGGNYYGLVIVDDYSRYTWVMFL 781

Query: 258  KHKDDALKSFISFAKRVQNEKGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSPRTP 317
             +K+DA  +F  FAK VQNEK   I+ IRSDHGGEF N  F+ FCEE+G +HNFS+PRTP
Sbjct: 782  ANKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRTP 841

Query: 318  QQNGVVERKNRTLQEFARSMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYELWH 377
            QQNGVVERKNR+L+E AR+MLNE  LPKYFW +A+NTAC+V NRVL+RP L KTPYE++ 
Sbjct: 842  QQNGVVERKNRSLEELARTMLNETNLPKYFWADAINTACHVLNRVLIRPILKKTPYEIYK 901

Query: 378  GKIPNIGYFKVFGCKCFILNN-KEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVIEE 437
            GK PNI YF+VFGCKC++LNN KE+LGKFD+K D  IFLGYS+ SK+YR++NK+TLV+EE
Sbjct: 902  GKKPNISYFRVFGCKCYVLNNGKEQLGKFDAKADEAIFLGYSTNSKSYRIYNKRTLVVEE 961

Query: 438  SIHVVFDESWNNVSNESICSDDLEKDFGDLLV----NDKGKEIVPSMQDVNIIEKKEEGS 497
            S+HVVFDES N         +DL +     L+    N+K KE V         EK++   
Sbjct: 962  SVHVVFDES-NKQETRQTEIEDLNELLDQPLLESEPNEKSKESVSH-------EKEKVTC 1021

Query: 498  SSLPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWI 557
              LPKEW+ +     D I+GN  +GV TRS++ N+ + +AFVSQ+EP++  +A  DE W+
Sbjct: 1022 EQLPKEWKTSRELSIDNIIGNIGKGVTTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWL 1081

Query: 558  LAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEE 617
            +AMQEELNQFERN+VW LVP P +  IIGTKWVFRNK+DE+G I+RNKARLVA+GY QEE
Sbjct: 1082 MAMQEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEE 1141

Query: 618  GIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESF 677
            GIDY+ETFAPVAR+EAIR+LLA++S KNF LYQMDVKSAFLNG I EEVYVEQPPGF  F
Sbjct: 1142 GIDYDETFAPVARIEAIRLLLAYSSIKNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDF 1201

Query: 678  DLPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIY 737
              PNHVYKLKKALYGLKQAPR+WYDRLSKFL+END++ GK+DNTLF+K   ND + VQIY
Sbjct: 1202 KNPNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKVDNTLFVKRFKNDTMYVQIY 1261

Query: 738  VDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLL 797
            VDDI+FGSTNSSLC+EF+K M  EFEMSMMGEL+FFLGLQIKQ+ DG FISQ KY  +LL
Sbjct: 1262 VDDIVFGSTNSSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMHDGTFISQSKYCNELL 1321

Query: 798  KKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCA 857
            KKF +   K A TP+S    LD DEKG  VD   YRG+IGSLLYLTASRPDIMF+VCLCA
Sbjct: 1322 KKFGMEGCKEAATPISNNCNLDLDEKGIAVDNSKYRGIIGSLLYLTASRPDIMFAVCLCA 1381

Query: 858  RFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGT 917
            RFQ+ PKESH  +VKRILKYL GT +VGLWYP+ V  +L+GYSD+DFAG  LDRKSTSGT
Sbjct: 1382 RFQANPKESHMKSVKRILKYLKGTTNVGLWYPKGVSLSLIGYSDSDFAGCRLDRKSTSGT 1441

Query: 918  CQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCD 977
            C  LGS+LVSW SKKQ  VALST EAEYIA  SCCAQILWMKQ L D+G++ + +P+ CD
Sbjct: 1442 CHLLGSALVSWHSKKQACVALSTAEAEYIAAGSCCAQILWMKQQLRDYGIELNKIPLRCD 1501

Query: 978  NTSAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESF 1009
            NTSAINLTKNPI HSRTKHI+IRHHF+R+HVQ     +EFV +  QLADIFTKPL  E F
Sbjct: 1502 NTSAINLTKNPILHSRTKHIEIRHHFLRDHVQRNDCVVEFVETTKQLADIFTKPLPRERF 1561

[Close]

BLAST of CSPI06G12950 vs. TrEMBL
Match: A0A151QRU6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_046224 PE=4 SV=1)

HSP 1 Score: 1286.6 bits (3328), Expect = 0.0e+00
Identity = 651/1027 (63.39%), Postives = 776/1027 (75.56%), Query Frame = 1


Query: 17   CLKASKKNKWYLDSGCSRHMTGDRSKLISFSKKNGGMVTFGDNKKGKIIGKGNIGNDSS- 76
            CL+A K   WYLDSGCSRHMTGD SK  S   KN G VT+GDN KGKI+G GN+GN SS 
Sbjct: 506  CLRA-KNLLWYLDSGCSRHMTGDPSKFSSLKLKNEGYVTYGDNNKGKILGHGNVGNSSSQ 565

Query: 77   TLIENVHLVDGLKHDLLSISQLD------------------------------ENVYTLD 136
            TLIENV LVDGLKH+LLSISQL                               +N+Y LD
Sbjct: 566  TLIENVLLVDGLKHNLLSISQLSDKGFKIEFDNTCCLICDKKSKEIRFIGKRIDNIYMLD 625

Query: 137  LNDYPIID--KCLSVLHNDSWLWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVCDA 196
            L     +   KCL     + WLWHRR  H  M  ++ + +  LV GLP  KF KDK+CDA
Sbjct: 626  LEHSITMSNTKCLITQEENIWLWHRRAAHIHMDHLNKLCRKELVVGLPKLKFGKDKLCDA 685

Query: 197  CQMGKQTKSSFKSKNVISTTRPLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWVLM 256
            CQ GKQ K+SFKSKN IST+RPLQL+HMDLFGPSR  S GGNYY  VIVDD+SR+TWV+ 
Sbjct: 686  CQKGKQVKASFKSKNQISTSRPLQLIHMDLFGPSRTMSLGGNYYGLVIVDDYSRYTWVMF 745

Query: 257  IKHKDDALKSFISFAKRVQNEKGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSPRT 316
            + +K+DA  +F  FAK VQNEK   I+ IRSDHGGEF N  F+ FCEE+G +HNFS+PRT
Sbjct: 746  LANKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRT 805

Query: 317  PQQNGVVERKNRTLQEFARSMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYELW 376
            PQQNGVVERKNR+L+E AR+MLNE  LPKYFW +A+NTAC+V N+VL+RP L KTPYE++
Sbjct: 806  PQQNGVVERKNRSLEELARTMLNETNLPKYFWADAINTACHVLNKVLIRPILKKTPYEIY 865

Query: 377  HGKIPNIGYFKVFGCKCFILNN-KEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVIE 436
             GK PNI YF+VFGCKC++LNN KE+LGKFD+K D  IFLGYS+ SKAYR++NK+TLV+E
Sbjct: 866  KGKKPNISYFRVFGCKCYVLNNGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVE 925

Query: 437  ESIHVVFDESWNNVSNESICSDDLEKDFGDLLVNDKGKEIVPSMQDVNIIEKKEEGSSSL 496
            ES+HVVFDES    + ++   D  E     LL N+       S   V    K++E    L
Sbjct: 926  ESVHVVFDESNKQETRQTEVEDLTELLDQSLLENEPNDVSKESESHV----KQKETCEQL 985

Query: 497  PKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAM 556
            PKEW+       D I+G+  +GV TRS++ N+ + +AFVSQ+EP++  +A  DE W++AM
Sbjct: 986  PKEWKTTRDLSMDNIIGSIGKGVSTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMAM 1045

Query: 557  QEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGID 616
            QEELNQFERN+VW LVP P +  IIGTKWVFRNK+DE+G I+RNKARLVA+GY QEEGID
Sbjct: 1046 QEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGID 1105

Query: 617  YEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLP 676
            Y+ETFAPVAR+EAIR+LLA+++ +NF LYQMDVKSAFLNG I EEVYVEQPPGF  F  P
Sbjct: 1106 YDETFAPVARIEAIRLLLAYSTIRNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKNP 1165

Query: 677  NHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDD 736
            NHVYKLKKALYGLKQAPR+WYDRLSKFL+END++ GK+DNTLF+K   ND + VQIYVDD
Sbjct: 1166 NHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKVDNTLFVKKFKNDTMYVQIYVDD 1225

Query: 737  IIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKF 796
            I+FGSTN SLC+EF+K M  EFEMSMMGEL+FFLGLQ+KQ+ DG FISQ KY  +LLKKF
Sbjct: 1226 IVFGSTNISLCKEFAKTMQGEFEMSMMGELTFFLGLQVKQMHDGTFISQSKYCNELLKKF 1285

Query: 797  KLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQ 856
             +   K A TP+S    LD DEKG  VD   YRG+IGSLLYLTASRPDIMF+VCLCARFQ
Sbjct: 1286 GMEGCKEAATPISNNCNLDLDEKGIAVDNSKYRGIIGSLLYLTASRPDIMFAVCLCARFQ 1345

Query: 857  SCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQF 916
            + PKESH  +VKRILKYL GT +VGLWYP+ V  +L+GYSD+D+AG  LDRKSTSGTC  
Sbjct: 1346 ANPKESHMKSVKRILKYLKGTTNVGLWYPKGVSLSLIGYSDSDYAGCRLDRKSTSGTCHL 1405

Query: 917  LGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTS 976
            LGS+LVSW SKKQ  VALST EAEYIA  SCCAQILWMKQ L D+G++ + +P+ CDNTS
Sbjct: 1406 LGSALVSWHSKKQACVALSTAEAEYIAAGSCCAQILWMKQQLRDYGVELNKIPLRCDNTS 1465

Query: 977  AINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKN 1009
            AINLTKNPI HSRTKHI+IRHHF+R+HVQ     +EFV ++ QLADIFTKPL  E F + 
Sbjct: 1466 AINLTKNPILHSRTKHIEIRHHFLRDHVQRNDCAVEFVETSKQLADIFTKPLPRERFNQL 1525

[Close]

BLAST of CSPI06G12950 vs. TrEMBL
Match: A0A151QSG7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_045914 PE=4 SV=1)

HSP 1 Score: 1261.5 bits (3263), Expect = 0.0e+00
Identity = 644/1008 (63.89%), Postives = 764/1008 (75.79%), Query Frame = 1


Query: 36   MTGDRSKLISFSKKNGGMVTFGDNKKGKIIGKGNIGN-DSSTLIENVHLVDGLKHDLLSI 95
            MTGD SK  S   KN G VT+GDN KGKI+G GNIGN  SSTLIENV LV+GLKH+LLSI
Sbjct: 1    MTGDPSKFSSLKLKNEGFVTYGDNNKGKILGHGNIGNSSSSTLIENVLLVEGLKHNLLSI 60

Query: 96   SQLD------------------------------ENVYTLDLNDYPIID--KCLSVLHND 155
            SQL                               +N+Y LDL     I   KCL    ++
Sbjct: 61   SQLSDKGFKIEFDNTCCLICDKLTKEIRFIGKRIDNIYMLDLEHSITISNTKCLITKEDN 120

Query: 156  SWLWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVCDACQMGKQTKSSFKSKNVIST 215
             WLWHRR  H  M  ++ +S+  LV GLP  KF KDK+CDACQ GKQ K+SFKSKN IST
Sbjct: 121  IWLWHRRAAHIHMDHLNKLSRKELVIGLPKLKFSKDKLCDACQKGKQVKASFKSKNQIST 180

Query: 216  TRPLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWVLMIKHKDDALKSFISFAKRVQ 275
            +RPLQL+HMDLFGPSR  S GGNYY  V+VDD+SRFTWV+ + +K +A  +F  FAK VQ
Sbjct: 181  SRPLQLIHMDLFGPSRTMSLGGNYYGLVMVDDYSRFTWVMFLANKSEAFNAFKKFAKLVQ 240

Query: 276  NEKGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSPRTPQQNGVVERKNRTLQEFAR 335
            NEK   I+ IRSDHGGEF N  F+ FCEE+G +HNFS+PRTPQQNGVVERKNR+L+E AR
Sbjct: 241  NEKNTNITSIRSDHGGEFQNILFQKFCEEHGINHNFSAPRTPQQNGVVERKNRSLEELAR 300

Query: 336  SMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYELWHGKIPNIGYFKVFGCKCFI 395
            +MLNE  LPKYFW +A+NTAC+V N+VL+RP L +TPYE+++G+ PNI YF+VFGCKCF+
Sbjct: 301  TMLNETKLPKYFWADAINTACHVLNKVLIRPILKRTPYEIYNGRKPNISYFRVFGCKCFV 360

Query: 396  LNN-KEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVIEESIHVVFDESWNNVSNESI 455
            LNN KE+LGKFD+K D  IFLGYS+ SKAYRV+NK+TLV+EES+HVVFDE+ N    +  
Sbjct: 361  LNNGKEQLGKFDAKADEAIFLGYSTNSKAYRVYNKRTLVVEESVHVVFDET-NKQETKKT 420

Query: 456  CSDDLEKDFGDLLVNDKGKEIVPSMQDVNIIEKKEEGSSSLPKEWRYALSHPKDLILGNP 515
              +DL  DF D    +      P  ++   IE  ++ S  LPKEW+ +     + I+GN 
Sbjct: 421  EIEDL-TDFLDQPPLESEPSEKP--KESESIETTKKTSEQLPKEWKTSKDLSIENIIGNI 480

Query: 516  EQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRP 575
             +GV TR S+ N+ + +AFVSQ+EP++  +A  DE W++AMQEELNQFERN+VW LVP P
Sbjct: 481  GKGVSTRRSIKNICNTMAFVSQVEPKTIDEALHDEHWLMAMQEELNQFERNEVWDLVPLP 540

Query: 576  SNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLA 635
            S+  IIGTKWVFRNK+DE+G IIRNKARLVA+GY QEEGIDY+ETFAPVAR+EAIR+LLA
Sbjct: 541  SDYPIIGTKWVFRNKLDESGIIIRNKARLVAKGYNQEEGIDYDETFAPVARIEAIRLLLA 600

Query: 636  FASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQAPRA 695
            +AS  NF LYQMDVKSAFLNG I EEVYVEQPPGF  F  PNHVYKLKKALYGLKQAPR+
Sbjct: 601  YASIMNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKYPNHVYKLKKALYGLKQAPRS 660

Query: 696  WYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMH 755
            WYDRLSKFL+END+  GK+DNTLF+K   ND + VQIYVDDI+FGSTN SLC+EF+K M 
Sbjct: 661  WYDRLSKFLIENDYVRGKVDNTLFVKKFKNDTMYVQIYVDDIVFGSTNLSLCKEFAKTMQ 720

Query: 756  NEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLD 815
             EFEMSMMGEL+FFLGLQIKQ+ DGIFISQ KY  +LLKKF +   K A TP+S +  LD
Sbjct: 721  GEFEMSMMGELTFFLGLQIKQMSDGIFISQSKYCNELLKKFGMEGCKEAATPISNSCNLD 780

Query: 816  KDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLL 875
             DEKG  VD   YRG+IGSLLYLTASRPDIMF VCLCARFQ+ PKESH  +VKRILKYL 
Sbjct: 781  LDEKGIAVDNSKYRGIIGSLLYLTASRPDIMFVVCLCARFQANPKESHMKSVKRILKYLK 840

Query: 876  GTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALS 935
            GT +VGLWYP+ V  +L+GYSD+D+ G  LDRKSTSGTC  LGS+LVSW SKKQ  VALS
Sbjct: 841  GTTNVGLWYPKGVSLSLIGYSDSDYVGCRLDRKSTSGTCHLLGSALVSWHSKKQACVALS 900

Query: 936  TTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSRTKHIDI 995
            T EAEYIA  SCCAQILWMKQ L D+G + + +P+ CDNTSAINLTKNPI HSRTKHI+I
Sbjct: 901  TAEAEYIAAGSCCAQILWMKQQLKDYGTELNKIPLRCDNTSAINLTKNPILHSRTKHIEI 960

Query: 996  RHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII 1009
            RHHF+R+HVQ     +EFV +N QLADIFTKPL +E F + R+ELGII
Sbjct: 961  RHHFLRDHVQKNDCVVEFVETNKQLADIFTKPLPKERFNQLRIELGII 1004

[Close]

BLAST of CSPI06G12950 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 349.4 bits (895), Expect = 7.6e-96
Identity = 196/497 (39.44%), Postives = 290/497 (58.35%), Query Frame = 1


Query: 504 EPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNII 563
           EP ++ +A+    W  AM +E+   E    W++   P N   IG KWV++ K + +G I 
Sbjct: 85  EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144

Query: 564 RNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYI 623
           R KARLVA+GY Q+EGID+ ETF+PV +L +++++LA ++  NF L+Q+D+ +AFLNG +
Sbjct: 145 RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDL 204

Query: 624 VEEVYVEQPPGFESFD----LPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKI 683
            EE+Y++ PPG+ +       PN V  LKK++YGLKQA R W+ + S  L+   F     
Sbjct: 205 DEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHS 264

Query: 684 DNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQI 743
           D+T F+K+     L V +YVDDII  S N +  +E    + + F++  +G L +FLGL+I
Sbjct: 265 DHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI 324

Query: 744 KQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGS 803
            +   GI I Q KY  DLL +  L   K +  PM  +        G  VD K YR +IG 
Sbjct: 325 ARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGR 384

Query: 804 LLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVG 863
           L+YL  +R DI F+V   ++F   P+ +H  AV +IL Y+ GT+  GL+Y    E  L  
Sbjct: 385 LMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV 444

Query: 864 YSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWM 923
           +SDA F      R+ST+G C FLG+SL+SW SKKQ  V+ S+ EAEY A++    +++W+
Sbjct: 445 FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWL 504

Query: 924 KQTLCDFGLKFDN-VPIFCDNTSAINLTKNPIHHSRTKHIDIRHHFIREH-VQNGHITLE 983
            Q   +  L       +FCDNT+AI++  N + H RTKHI+   H +RE  V    ++  
Sbjct: 505 AQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYS 564

Query: 984 FVSSNNQLADIFTKPLS 995
           F + + Q  D FT+ LS
Sbjct: 565 FQAYDEQ--DGFTEYLS 579

[Close]

BLAST of CSPI06G12950 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 149.1 bits (375), Expect = 1.5e-35
Identity = 81/225 (36.00%), Postives = 132/225 (58.67%), Query Frame = 1


Query: 697 IYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRD 756
           +YVDDI+   ++++L       + + F M  +G + +FLG+QIK    G+F+SQ KY   
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 757 LLKKFKLNEGKVAKTPMSTTTKLDKDEK---GKCVDIKTYRGMIGSLLYLTASRPDIMFS 816
           +L     N G +   PMST   L  +      K  D   +R ++G+L YLT +RPDI ++
Sbjct: 65  ILN----NAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYA 124

Query: 817 VCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRK 876
           V +  +    P  + F  +KR+L+Y+ GTI  GL+  +N + N+  + D+D+AG    R+
Sbjct: 125 VNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRR 184

Query: 877 STSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILW 919
           ST+G C FLG +++SW +K+Q +V+ S+TE EY A+A   A++ W
Sbjct: 185 STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of CSPI06G12950 vs. TAIR10
Match: ATMG00820.1 (ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase))

HSP 1 Score: 100.5 bits (249), Expect = 6.2e-21
Identity = 51/99 (51.52%), Postives = 65/99 (65.66%), Query Frame = 1


Query: 504 EPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNII 563
           EP+S   A  D  W  AMQEEL+   RNK W LVP P N +I+G KWVF+ K+  +G + 
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 564 RNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFA 603
           R KARLVA+G+ QEEGI + ET++PV R   IR +L  A
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]

BLAST of CSPI06G12950 vs. TAIR10
Match: ATMG00710.1 (ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 59.7 bits (143), Expect = 1.2e-08
Identity = 30/76 (39.47%), Postives = 41/76 (53.95%), Query Frame = 1


Query: 294 NRTLQEFARSMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYELWHGKIPNIGYF 353
           NRT+ E  RSML E GLPK F  +A NTA ++ N+          P E+W   +P   Y 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 354 KVFGCKCFILNNKEKL 370
           + FGC  +I  ++ KL
Sbjct: 62  RRFGCVAYIHCDEGKL 77

[Close]

BLAST of CSPI06G12950 vs. NCBI nr
Match: gi|147834092|emb|CAN64335.1| (hypothetical protein VITISV_001808 [Vitis vinifera])

HSP 1 Score: 1303.5 bits (3372), Expect = 0.0e+00
Identity = 654/1027 (63.68%), Postives = 779/1027 (75.85%), Query Frame = 1


Query: 12   DLVPVCLKASKKNKWYLDSGCSRHMTGDRSKLISFSKKNGGMVTFGDNKKGKIIGKGNIG 71
            +++    K SK++KW+LDSGCSRHMTGD SK    +K+ GG VTFGDN KG+IIG+GNIG
Sbjct: 460  EMILASQKCSKEDKWFLDSGCSRHMTGDESKFAFLTKRKGGYVTFGDNAKGRIIGQGNIG 519

Query: 72   NDSSTLIENVHLVDGLKHD---------------------LLSISQLD---------ENV 131
            N +S+LIE+V LVDGLKH+                     ++   Q D         ENV
Sbjct: 520  NGTSSLIESVLLVDGLKHNLLSISQLCNKGFKVIFEASHCIIKDIQNDKTIFMGHRCENV 579

Query: 132  YTLDLNDYPIIDKCLSVLHNDSWLWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVC 191
            Y ++++ Y   D+C S +H+ SWLWHRRLGHA+M LIS ++K+ LVRGLP   F+KDK+C
Sbjct: 580  YAINISKYDGHDRCFSSMHDQSWLWHRRLGHANMDLISQLNKDELVRGLPKINFQKDKIC 639

Query: 192  DACQMGKQTKSSFKSKNVISTTRPLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWV 251
            +ACQMGKQ K+SFK+KN IST+RPL+LLHMDLFGPSR  S GG  YA+VIVDDFSR+TWV
Sbjct: 640  EACQMGKQIKNSFKNKNFISTSRPLELLHMDLFGPSRTPSLGGKSYAYVIVDDFSRYTWV 699

Query: 252  LMIKHKDDALKSFISFAKRVQNEKGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSP 311
            L +  K +A   F  F  +VQNEKGF I+ IRSDHG EF+N  F+ +C + G +HNF +P
Sbjct: 700  LFLSQKSEAFYEFSKFCNKVQNEKGFSITCIRSDHGREFENFDFEEYCNKYGINHNFLAP 759

Query: 312  RTPQQNGVVERKNRTLQEFARSMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYE 371
            RT QQNGVVERKNRTLQE AR+MLNE  LPKYFW EA+NT+CYV NR+L+RP L KTPYE
Sbjct: 760  RTSQQNGVVERKNRTLQEMARTMLNENNLPKYFWAEAINTSCYVLNRILLRPILKKTPYE 819

Query: 372  LWHGKIPNIGYFKVFGCKCFILNNKEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVI 431
            LW  K PNI YFKVFGCKCFILN K+ LGKFD+K+DVGIFLGYS++SKA+RVFNK+T+V+
Sbjct: 820  LWKNKKPNISYFKVFGCKCFILNTKDNLGKFDAKSDVGIFLGYSTSSKAFRVFNKRTMVV 879

Query: 432  EESIHVVFDESWNNVSNESICSDDLEKDFGDLLVNDKGKEIVPSMQDVNIIEKKEEGSSS 491
            EESIH  +   W N    +       KD      N K  E +P        +K       
Sbjct: 880  EESIH-DWRLPWENCKLRT-------KD------NKKKVERIPR-------KKNHLWHYL 939

Query: 492  LPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILA 551
            L  + ++ ++HP+D I+GNP  GV+TRSSL N+ +NLAF+SQIEP++ KDA  DE W++A
Sbjct: 940  LLNKCKFVINHPQDQIIGNPLSGVRTRSSLRNICNNLAFISQIEPKNIKDAIVDENWMIA 999

Query: 552  MQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGI 611
            MQ+ELNQFER++VW+LVPRPSN S+IGTKWVFRNKMDENG I+RNKARLVAQGY QEEGI
Sbjct: 1000 MQKELNQFERSEVWELVPRPSNQSVIGTKWVFRNKMDENGIIVRNKARLVAQGYNQEEGI 1059

Query: 612  DYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDL 671
            DYEETFAPVARLEAIRMLLAFA +K+FILYQMDVKSAFLNG+I EE+YVEQPPGF+SF+ 
Sbjct: 1060 DYEETFAPVARLEAIRMLLAFACFKDFILYQMDVKSAFLNGFINEEIYVEQPPGFQSFNF 1119

Query: 672  PNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVD 731
            PNHV+KLKKALYGLKQAPRAWY+RLSKFLL+  FKMGKID TLFIK K NDML+VQIYVD
Sbjct: 1120 PNHVFKLKKALYGLKQAPRAWYERLSKFLLKKSFKMGKIDTTLFIKTKENDMLLVQIYVD 1179

Query: 732  DIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKK 791
            DI FG+TN SLCE+FSKCMH                               KY +DLLK+
Sbjct: 1180 DITFGATNDSLCEDFSKCMHT------------------------------KYIKDLLKR 1239

Query: 792  FKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARF 851
            F + E KV KTPMS++ KLD DEKGK +D   YRGMIGSLLYLTASRPDIM+SVCLCARF
Sbjct: 1240 FNMGEAKVMKTPMSSSIKLDMDEKGKSIDSTMYRGMIGSLLYLTASRPDIMYSVCLCARF 1299

Query: 852  QSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQ 911
            QSCPKESH  AVKRIL+YL GT+ +GLWYP+   F L+G+SDADFAG  ++RKSTSGTC 
Sbjct: 1300 QSCPKESHLSAVKRILRYLKGTMSIGLWYPKGDNFELIGFSDADFAGCRVERKSTSGTCH 1359

Query: 912  FLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNT 971
             LG SLVSW SKKQNS+ALST EAEY A + C AQILWMKQTL DF L F++VPI CDNT
Sbjct: 1360 SLGHSLVSWHSKKQNSIALSTAEAEYTAASLCYAQILWMKQTLSDFNLSFEHVPIKCDNT 1419

Query: 972  SAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCK 1008
            SAIN++KNP+ HSRTKHI+IRHHF+R+H Q G ITLEFVS+ +QLADIFTKPLSEE F  
Sbjct: 1420 SAINISKNPVQHSRTKHIEIRHHFLRDHAQKGDITLEFVSTKDQLADIFTKPLSEEQFSD 1435

[Close]

BLAST of CSPI06G12950 vs. NCBI nr
Match: gi|1012367548|gb|KYP78729.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 1297.0 bits (3355), Expect = 0.0e+00
Identity = 653/1027 (63.58%), Postives = 781/1027 (76.05%), Query Frame = 1


Query: 17   CLKASKKNKWYLDSGCSRHMTGDRSKLISFSKKNGGMVTFGDNKKGKIIGKGNIGNDSS- 76
            CL+A K   WYLDSGCSRHMTGD SK  +   KN G VT+GDN KGKI+G GN+GN SS 
Sbjct: 537  CLRA-KNLLWYLDSGCSRHMTGDPSKFTNLKLKNEGYVTYGDNNKGKILGHGNVGNPSSQ 596

Query: 77   TLIENVHLVDGLKHDLLSISQLD------------------------------ENVYTLD 136
            TLIENV LVDGLKH+LLSISQL                               +N+Y LD
Sbjct: 597  TLIENVLLVDGLKHNLLSISQLSDKGFKIEFDNTCCLICDKKSKEIRFIGKRIDNIYMLD 656

Query: 137  LNDYPIID--KCLSVLHNDSWLWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVCDA 196
            L     +   KCL     + WLWHRR  H  M  ++ + +  LV GLP  KF KDK+CDA
Sbjct: 657  LEHSITMSNTKCLITQEENIWLWHRRAAHIHMDHLNKLCRKELVVGLPKLKFGKDKLCDA 716

Query: 197  CQMGKQTKSSFKSKNVISTTRPLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWVLM 256
            CQ GKQ K+SFKSKN IST+RPLQL+HMDLFGPSR  S GGNYY  VIVDD+SR+TWV+ 
Sbjct: 717  CQKGKQVKASFKSKNQISTSRPLQLIHMDLFGPSRTMSLGGNYYGLVIVDDYSRYTWVMF 776

Query: 257  IKHKDDALKSFISFAKRVQNEKGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSPRT 316
            + +K+DA  +F  FAK VQNEK   I+ IRSDHGGEF N  F+ FCEE+G +HNFS+PRT
Sbjct: 777  LANKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNILFQKFCEEHGINHNFSAPRT 836

Query: 317  PQQNGVVERKNRTLQEFARSMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYELW 376
            PQQNGVVERKNR+L+E AR+MLNE  LPKYFW +A+NTAC+V N+VL+RP L KTPYE++
Sbjct: 837  PQQNGVVERKNRSLEELARTMLNETNLPKYFWADAINTACHVLNKVLIRPILKKTPYEIY 896

Query: 377  HGKIPNIGYFKVFGCKCFILNN-KEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVIE 436
             GK PNI YF+VFGCKC++LNN KE+LGKFD+K D  IFLGYS+ SKAYR++NK+TLV+E
Sbjct: 897  KGKKPNISYFRVFGCKCYVLNNGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVE 956

Query: 437  ESIHVVFDESWNNVSNESICSDDLEKDFGDLLVNDKGKEIVPSMQDVNIIEKKEEGSSSL 496
            ES+HVVFDES N         +DL +     L+ ++  E+    +    +EK +E    L
Sbjct: 957  ESVHVVFDES-NKQETRQTEIEDLNELLDQSLLENEPNEVPKESES---LEKAKETCEQL 1016

Query: 497  PKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAM 556
            PKEW+ +     D I+GN  +GV TRS++ N+ + +AFVSQ+EP++  +A  DE W++AM
Sbjct: 1017 PKEWKTSRDLSMDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMAM 1076

Query: 557  QEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGID 616
            QEELNQFERN+VW LVP P +  IIGTKWVFRNK+DE+G I+RNKARLVA+GY QEEGID
Sbjct: 1077 QEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGID 1136

Query: 617  YEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLP 676
            Y+ETFAPVAR+EAIR+LLA++S KNF LYQMDVKSAFLNG+I EEVYVEQPPGF  +  P
Sbjct: 1137 YDETFAPVARIEAIRLLLAYSSIKNFKLYQMDVKSAFLNGFIQEEVYVEQPPGFVDYKNP 1196

Query: 677  NHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDD 736
            NHVYKLKKALYGLKQAPR+WYDRLSKFL+END++ GK+DNTLF+K   ND + VQIYVDD
Sbjct: 1197 NHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKVDNTLFVKKFKNDTMYVQIYVDD 1256

Query: 737  IIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKF 796
            I+FGSTN+SLC+EF+K M  EFEMSMMGEL+FFLGLQIKQ+ DGIFISQ KY  +LLKKF
Sbjct: 1257 IVFGSTNTSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMHDGIFISQSKYCNELLKKF 1316

Query: 797  KLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQ 856
             +   K A TP+S    LD DEKG  VD   YRG+IGSLLYLTASRPDIMF+VCLCARFQ
Sbjct: 1317 GMEGCKEAATPISNNCNLDLDEKGIAVDSSKYRGIIGSLLYLTASRPDIMFAVCLCARFQ 1376

Query: 857  SCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQF 916
            + PKESH  +VKRILKYL GT +VGLWYP+ V  +L+GYSD+D+AG  LDRKSTSGTC  
Sbjct: 1377 ANPKESHMKSVKRILKYLKGTTNVGLWYPKGVSLSLIGYSDSDYAGCRLDRKSTSGTCHL 1436

Query: 917  LGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTS 976
            LGS+LVSW SKKQ  VALST EAEYIA  SCCAQILWMKQ L D+G++ + +P+ CDNTS
Sbjct: 1437 LGSALVSWHSKKQACVALSTAEAEYIAAGSCCAQILWMKQQLRDYGVELNKIPLRCDNTS 1496

Query: 977  AINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKN 1009
            AINLTKNPI HSRTKHI+IRHHF+R+HVQ     +EFV ++ QLADIFTKPL  E F   
Sbjct: 1497 AINLTKNPILHSRTKHIEIRHHFLRDHVQRNDCVVEFVETSKQLADIFTKPLPRERFNNL 1556

[Close]

BLAST of CSPI06G12950 vs. NCBI nr
Match: gi|1012336097|gb|KYP47407.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 1293.5 bits (3346), Expect = 0.0e+00
Identity = 658/1030 (63.88%), Postives = 778/1030 (75.53%), Query Frame = 1


Query: 18   LKASKKNKWYLDSGCSRHMTGDRSKLISFSKKNGGMVTFGDNKKGKIIGKGNIGNDSS-T 77
            L  +K   WYLDSGCSRHMTGD SK  S   KN G VT+GDN KGKI+G GN+GN SS T
Sbjct: 542  LLRAKNLLWYLDSGCSRHMTGDPSKFSSLKLKNEGYVTYGDNNKGKILGHGNVGNSSSQT 601

Query: 78   LIENVHLVDGLKHDLLSISQLD------------------------------ENVYTLDL 137
            LIENV LVDGLKH+LLSISQL                               +N+Y LDL
Sbjct: 602  LIENVLLVDGLKHNLLSISQLSDKGFKIEFDDTCCLICDKRSKEIRFIGKRIDNIYMLDL 661

Query: 138  NDYPIID--KCLSVLHNDSWLWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVCDAC 197
                 +   KCL      +WLWHRR  H  M  ++ +S+  LV GLP  KF KDK+CDAC
Sbjct: 662  EHSISMSNTKCLITQEESTWLWHRRAAHIHMDHLNKLSRKELVVGLPKLKFGKDKLCDAC 721

Query: 198  QMGKQTKSSFKSKNVISTTRPLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWVLMI 257
            Q GKQ K+SFKSKN IST+RPLQL+HMDLFGPSR  S GGNYY  VIVDD+SR+TWV+ +
Sbjct: 722  QKGKQVKASFKSKNQISTSRPLQLIHMDLFGPSRTMSLGGNYYGLVIVDDYSRYTWVMFL 781

Query: 258  KHKDDALKSFISFAKRVQNEKGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSPRTP 317
             +K+DA  +F  FAK VQNEK   I+ IRSDHGGEF N  F+ FCEE+G +HNFS+PRTP
Sbjct: 782  ANKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRTP 841

Query: 318  QQNGVVERKNRTLQEFARSMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYELWH 377
            QQNGVVERKNR+L+E AR+MLNE  LPKYFW +A+NTAC+V NRVL+RP L KTPYE++ 
Sbjct: 842  QQNGVVERKNRSLEELARTMLNETNLPKYFWADAINTACHVLNRVLIRPILKKTPYEIYK 901

Query: 378  GKIPNIGYFKVFGCKCFILNN-KEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVIEE 437
            GK PNI YF+VFGCKC++LNN KE+LGKFD+K D  IFLGYS+ SK+YR++NK+TLV+EE
Sbjct: 902  GKKPNISYFRVFGCKCYVLNNGKEQLGKFDAKADEAIFLGYSTNSKSYRIYNKRTLVVEE 961

Query: 438  SIHVVFDESWNNVSNESICSDDLEKDFGDLLV----NDKGKEIVPSMQDVNIIEKKEEGS 497
            S+HVVFDES N         +DL +     L+    N+K KE V         EK++   
Sbjct: 962  SVHVVFDES-NKQETRQTEIEDLNELLDQPLLESEPNEKSKESVSH-------EKEKVTC 1021

Query: 498  SSLPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWI 557
              LPKEW+ +     D I+GN  +GV TRS++ N+ + +AFVSQ+EP++  +A  DE W+
Sbjct: 1022 EQLPKEWKTSRELSIDNIIGNIGKGVTTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWL 1081

Query: 558  LAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEE 617
            +AMQEELNQFERN+VW LVP P +  IIGTKWVFRNK+DE+G I+RNKARLVA+GY QEE
Sbjct: 1082 MAMQEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEE 1141

Query: 618  GIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESF 677
            GIDY+ETFAPVAR+EAIR+LLA++S KNF LYQMDVKSAFLNG I EEVYVEQPPGF  F
Sbjct: 1142 GIDYDETFAPVARIEAIRLLLAYSSIKNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDF 1201

Query: 678  DLPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIY 737
              PNHVYKLKKALYGLKQAPR+WYDRLSKFL+END++ GK+DNTLF+K   ND + VQIY
Sbjct: 1202 KNPNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKVDNTLFVKRFKNDTMYVQIY 1261

Query: 738  VDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLL 797
            VDDI+FGSTNSSLC+EF+K M  EFEMSMMGEL+FFLGLQIKQ+ DG FISQ KY  +LL
Sbjct: 1262 VDDIVFGSTNSSLCKEFAKTMQGEFEMSMMGELTFFLGLQIKQMHDGTFISQSKYCNELL 1321

Query: 798  KKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCA 857
            KKF +   K A TP+S    LD DEKG  VD   YRG+IGSLLYLTASRPDIMF+VCLCA
Sbjct: 1322 KKFGMEGCKEAATPISNNCNLDLDEKGIAVDNSKYRGIIGSLLYLTASRPDIMFAVCLCA 1381

Query: 858  RFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGT 917
            RFQ+ PKESH  +VKRILKYL GT +VGLWYP+ V  +L+GYSD+DFAG  LDRKSTSGT
Sbjct: 1382 RFQANPKESHMKSVKRILKYLKGTTNVGLWYPKGVSLSLIGYSDSDFAGCRLDRKSTSGT 1441

Query: 918  CQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCD 977
            C  LGS+LVSW SKKQ  VALST EAEYIA  SCCAQILWMKQ L D+G++ + +P+ CD
Sbjct: 1442 CHLLGSALVSWHSKKQACVALSTAEAEYIAAGSCCAQILWMKQQLRDYGIELNKIPLRCD 1501

Query: 978  NTSAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESF 1009
            NTSAINLTKNPI HSRTKHI+IRHHF+R+HVQ     +EFV +  QLADIFTKPL  E F
Sbjct: 1502 NTSAINLTKNPILHSRTKHIEIRHHFLRDHVQRNDCVVEFVETTKQLADIFTKPLPRERF 1561

[Close]

BLAST of CSPI06G12950 vs. NCBI nr
Match: gi|1012320158|gb|KYP32982.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 1286.6 bits (3328), Expect = 0.0e+00
Identity = 651/1027 (63.39%), Postives = 776/1027 (75.56%), Query Frame = 1


Query: 17   CLKASKKNKWYLDSGCSRHMTGDRSKLISFSKKNGGMVTFGDNKKGKIIGKGNIGNDSS- 76
            CL+A K   WYLDSGCSRHMTGD SK  S   KN G VT+GDN KGKI+G GN+GN SS 
Sbjct: 506  CLRA-KNLLWYLDSGCSRHMTGDPSKFSSLKLKNEGYVTYGDNNKGKILGHGNVGNSSSQ 565

Query: 77   TLIENVHLVDGLKHDLLSISQLD------------------------------ENVYTLD 136
            TLIENV LVDGLKH+LLSISQL                               +N+Y LD
Sbjct: 566  TLIENVLLVDGLKHNLLSISQLSDKGFKIEFDNTCCLICDKKSKEIRFIGKRIDNIYMLD 625

Query: 137  LNDYPIID--KCLSVLHNDSWLWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVCDA 196
            L     +   KCL     + WLWHRR  H  M  ++ + +  LV GLP  KF KDK+CDA
Sbjct: 626  LEHSITMSNTKCLITQEENIWLWHRRAAHIHMDHLNKLCRKELVVGLPKLKFGKDKLCDA 685

Query: 197  CQMGKQTKSSFKSKNVISTTRPLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWVLM 256
            CQ GKQ K+SFKSKN IST+RPLQL+HMDLFGPSR  S GGNYY  VIVDD+SR+TWV+ 
Sbjct: 686  CQKGKQVKASFKSKNQISTSRPLQLIHMDLFGPSRTMSLGGNYYGLVIVDDYSRYTWVMF 745

Query: 257  IKHKDDALKSFISFAKRVQNEKGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSPRT 316
            + +K+DA  +F  FAK VQNEK   I+ IRSDHGGEF N  F+ FCEE+G +HNFS+PRT
Sbjct: 746  LANKNDAFNAFRKFAKLVQNEKCSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRT 805

Query: 317  PQQNGVVERKNRTLQEFARSMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYELW 376
            PQQNGVVERKNR+L+E AR+MLNE  LPKYFW +A+NTAC+V N+VL+RP L KTPYE++
Sbjct: 806  PQQNGVVERKNRSLEELARTMLNETNLPKYFWADAINTACHVLNKVLIRPILKKTPYEIY 865

Query: 377  HGKIPNIGYFKVFGCKCFILNN-KEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVIE 436
             GK PNI YF+VFGCKC++LNN KE+LGKFD+K D  IFLGYS+ SKAYR++NK+TLV+E
Sbjct: 866  KGKKPNISYFRVFGCKCYVLNNGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVE 925

Query: 437  ESIHVVFDESWNNVSNESICSDDLEKDFGDLLVNDKGKEIVPSMQDVNIIEKKEEGSSSL 496
            ES+HVVFDES    + ++   D  E     LL N+       S   V    K++E    L
Sbjct: 926  ESVHVVFDESNKQETRQTEVEDLTELLDQSLLENEPNDVSKESESHV----KQKETCEQL 985

Query: 497  PKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAM 556
            PKEW+       D I+G+  +GV TRS++ N+ + +AFVSQ+EP++  +A  DE W++AM
Sbjct: 986  PKEWKTTRDLSMDNIIGSIGKGVSTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMAM 1045

Query: 557  QEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGID 616
            QEELNQFERN+VW LVP P +  IIGTKWVFRNK+DE+G I+RNKARLVA+GY QEEGID
Sbjct: 1046 QEELNQFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGID 1105

Query: 617  YEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLP 676
            Y+ETFAPVAR+EAIR+LLA+++ +NF LYQMDVKSAFLNG I EEVYVEQPPGF  F  P
Sbjct: 1106 YDETFAPVARIEAIRLLLAYSTIRNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKNP 1165

Query: 677  NHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDD 736
            NHVYKLKKALYGLKQAPR+WYDRLSKFL+END++ GK+DNTLF+K   ND + VQIYVDD
Sbjct: 1166 NHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKVDNTLFVKKFKNDTMYVQIYVDD 1225

Query: 737  IIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKF 796
            I+FGSTN SLC+EF+K M  EFEMSMMGEL+FFLGLQ+KQ+ DG FISQ KY  +LLKKF
Sbjct: 1226 IVFGSTNISLCKEFAKTMQGEFEMSMMGELTFFLGLQVKQMHDGTFISQSKYCNELLKKF 1285

Query: 797  KLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQ 856
             +   K A TP+S    LD DEKG  VD   YRG+IGSLLYLTASRPDIMF+VCLCARFQ
Sbjct: 1286 GMEGCKEAATPISNNCNLDLDEKGIAVDNSKYRGIIGSLLYLTASRPDIMFAVCLCARFQ 1345

Query: 857  SCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQF 916
            + PKESH  +VKRILKYL GT +VGLWYP+ V  +L+GYSD+D+AG  LDRKSTSGTC  
Sbjct: 1346 ANPKESHMKSVKRILKYLKGTTNVGLWYPKGVSLSLIGYSDSDYAGCRLDRKSTSGTCHL 1405

Query: 917  LGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTS 976
            LGS+LVSW SKKQ  VALST EAEYIA  SCCAQILWMKQ L D+G++ + +P+ CDNTS
Sbjct: 1406 LGSALVSWHSKKQACVALSTAEAEYIAAGSCCAQILWMKQQLRDYGVELNKIPLRCDNTS 1465

Query: 977  AINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKN 1009
            AINLTKNPI HSRTKHI+IRHHF+R+HVQ     +EFV ++ QLADIFTKPL  E F + 
Sbjct: 1466 AINLTKNPILHSRTKHIEIRHHFLRDHVQRNDCAVEFVETSKQLADIFTKPLPRERFNQL 1525

[Close]

BLAST of CSPI06G12950 vs. NCBI nr
Match: gi|1012320519|gb|KYP33249.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 1261.5 bits (3263), Expect = 0.0e+00
Identity = 644/1008 (63.89%), Postives = 764/1008 (75.79%), Query Frame = 1


Query: 36   MTGDRSKLISFSKKNGGMVTFGDNKKGKIIGKGNIGN-DSSTLIENVHLVDGLKHDLLSI 95
            MTGD SK  S   KN G VT+GDN KGKI+G GNIGN  SSTLIENV LV+GLKH+LLSI
Sbjct: 1    MTGDPSKFSSLKLKNEGFVTYGDNNKGKILGHGNIGNSSSSTLIENVLLVEGLKHNLLSI 60

Query: 96   SQLD------------------------------ENVYTLDLNDYPIID--KCLSVLHND 155
            SQL                               +N+Y LDL     I   KCL    ++
Sbjct: 61   SQLSDKGFKIEFDNTCCLICDKLTKEIRFIGKRIDNIYMLDLEHSITISNTKCLITKEDN 120

Query: 156  SWLWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVCDACQMGKQTKSSFKSKNVIST 215
             WLWHRR  H  M  ++ +S+  LV GLP  KF KDK+CDACQ GKQ K+SFKSKN IST
Sbjct: 121  IWLWHRRAAHIHMDHLNKLSRKELVIGLPKLKFSKDKLCDACQKGKQVKASFKSKNQIST 180

Query: 216  TRPLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWVLMIKHKDDALKSFISFAKRVQ 275
            +RPLQL+HMDLFGPSR  S GGNYY  V+VDD+SRFTWV+ + +K +A  +F  FAK VQ
Sbjct: 181  SRPLQLIHMDLFGPSRTMSLGGNYYGLVMVDDYSRFTWVMFLANKSEAFNAFKKFAKLVQ 240

Query: 276  NEKGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSPRTPQQNGVVERKNRTLQEFAR 335
            NEK   I+ IRSDHGGEF N  F+ FCEE+G +HNFS+PRTPQQNGVVERKNR+L+E AR
Sbjct: 241  NEKNTNITSIRSDHGGEFQNILFQKFCEEHGINHNFSAPRTPQQNGVVERKNRSLEELAR 300

Query: 336  SMLNEYGLPKYFWTEAVNTACYVSNRVLVRPSLDKTPYELWHGKIPNIGYFKVFGCKCFI 395
            +MLNE  LPKYFW +A+NTAC+V N+VL+RP L +TPYE+++G+ PNI YF+VFGCKCF+
Sbjct: 301  TMLNETKLPKYFWADAINTACHVLNKVLIRPILKRTPYEIYNGRKPNISYFRVFGCKCFV 360

Query: 396  LNN-KEKLGKFDSKTDVGIFLGYSSTSKAYRVFNKKTLVIEESIHVVFDESWNNVSNESI 455
            LNN KE+LGKFD+K D  IFLGYS+ SKAYRV+NK+TLV+EES+HVVFDE+ N    +  
Sbjct: 361  LNNGKEQLGKFDAKADEAIFLGYSTNSKAYRVYNKRTLVVEESVHVVFDET-NKQETKKT 420

Query: 456  CSDDLEKDFGDLLVNDKGKEIVPSMQDVNIIEKKEEGSSSLPKEWRYALSHPKDLILGNP 515
              +DL  DF D    +      P  ++   IE  ++ S  LPKEW+ +     + I+GN 
Sbjct: 421  EIEDL-TDFLDQPPLESEPSEKP--KESESIETTKKTSEQLPKEWKTSKDLSIENIIGNI 480

Query: 516  EQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRP 575
             +GV TR S+ N+ + +AFVSQ+EP++  +A  DE W++AMQEELNQFERN+VW LVP P
Sbjct: 481  GKGVSTRRSIKNICNTMAFVSQVEPKTIDEALHDEHWLMAMQEELNQFERNEVWDLVPLP 540

Query: 576  SNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLA 635
            S+  IIGTKWVFRNK+DE+G IIRNKARLVA+GY QEEGIDY+ETFAPVAR+EAIR+LLA
Sbjct: 541  SDYPIIGTKWVFRNKLDESGIIIRNKARLVAKGYNQEEGIDYDETFAPVARIEAIRLLLA 600

Query: 636  FASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQAPRA 695
            +AS  NF LYQMDVKSAFLNG I EEVYVEQPPGF  F  PNHVYKLKKALYGLKQAPR+
Sbjct: 601  YASIMNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKYPNHVYKLKKALYGLKQAPRS 660

Query: 696  WYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMH 755
            WYDRLSKFL+END+  GK+DNTLF+K   ND + VQIYVDDI+FGSTN SLC+EF+K M 
Sbjct: 661  WYDRLSKFLIENDYVRGKVDNTLFVKKFKNDTMYVQIYVDDIVFGSTNLSLCKEFAKTMQ 720

Query: 756  NEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLD 815
             EFEMSMMGEL+FFLGLQIKQ+ DGIFISQ KY  +LLKKF +   K A TP+S +  LD
Sbjct: 721  GEFEMSMMGELTFFLGLQIKQMSDGIFISQSKYCNELLKKFGMEGCKEAATPISNSCNLD 780

Query: 816  KDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLL 875
             DEKG  VD   YRG+IGSLLYLTASRPDIMF VCLCARFQ+ PKESH  +VKRILKYL 
Sbjct: 781  LDEKGIAVDNSKYRGIIGSLLYLTASRPDIMFVVCLCARFQANPKESHMKSVKRILKYLK 840

Query: 876  GTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALS 935
            GT +VGLWYP+ V  +L+GYSD+D+ G  LDRKSTSGTC  LGS+LVSW SKKQ  VALS
Sbjct: 841  GTTNVGLWYPKGVSLSLIGYSDSDYVGCRLDRKSTSGTCHLLGSALVSWHSKKQACVALS 900

Query: 936  TTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSRTKHIDI 995
            T EAEYIA  SCCAQILWMKQ L D+G + + +P+ CDNTSAINLTKNPI HSRTKHI+I
Sbjct: 901  TAEAEYIAAGSCCAQILWMKQQLKDYGTELNKIPLRCDNTSAINLTKNPILHSRTKHIEI 960

Query: 996  RHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII 1009
            RHHF+R+HVQ     +EFV +N QLADIFTKPL +E F + R+ELGII
Sbjct: 961  RHHFLRDHVQKNDCVVEFVETNKQLADIFTKPLPKERFNQLRIELGII 1004

The following BLAST results are available for this feature:

BLAST of CSPI06G12950 vs. Swiss-Prot


Match Name	E-value	Identity	Description
POLX_TOBAC	8.7e-142	35.13	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
COPIA_DROME	1.7e-100	39.04	Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3	[more]
YCH4_YEAST	1.9e-35	30.74	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]
M810_ARATH	2.7e-34	36.00	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg0...	[more]
YH41B_YEAST	1.5e-32	26.53	Transposon Ty4-H Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of CSPI06G12950 vs. TrEMBL


Match Name	E-value	Identity	Description
A5C8K0_VITVI	0.0e+00	63.68	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001808 PE=4 SV=1	[more]
A0A151UHG7_CAJCA	0.0e+00	63.58	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=...	[more]
A0A151RY83_CAJCA	0.0e+00	63.88	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=...	[more]
A0A151QRU6_CAJCA	0.0e+00	63.39	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=...	[more]
A0A151QSG7_CAJCA	0.0e+00	63.89	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=...	[more]

BLAST of CSPI06G12950 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G23160.1	7.6e-96	39.44	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.5e-35	36.00	ATMG00810.1 DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	6.2e-21	51.52	ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00710.1	1.2e-08	39.47	ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

BLAST of CSPI06G12950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|147834092\|emb\|CAN64335.1\|	0.0e+00	63.68	hypothetical protein VITISV_001808 [Vitis vinifera]	[more]
gi\|1012367548\|gb\|KYP78729.1\|	0.0e+00	63.58	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]
gi\|1012336097\|gb\|KYP47407.1\|	0.0e+00	63.88	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]
gi\|1012320158\|gb\|KYP32982.1\|	0.0e+00	63.39	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]
gi\|1012320519\|gb\|KYP33249.1\|	0.0e+00	63.89	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf
IPR013103	RVT_2
IPR025724	GAG-pre-integrase_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0015074	DNA integration

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G12950.1	CSPI06G12950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 183..298 score: 2.3
IPR001584	Integrase, catalytic core	PROFILE	PS50994	INTEGRASE	coord: 181..347 score: 25
IPR012337	Ribonuclease H-like domain	GENE3D	G3DSA:3.30.420.10		coord: 184..349 score: 6.1
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 183..356 score: 1.15
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 531..774 score: 1.6
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 100..169 score: 1.9
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 20..933 score:
None	No IPR available	PANTHER	PTHR11439:SF192	SUBFAMILY NOT NAMED	coord: 20..933 score:
None	No IPR available	unknown	SSF56672	DNA/RNA polymerases	coord: 530..753 score: 6.97E-27coord: 783..961 score: 6.97

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G12950	Wild cucumber (PI 183967)	cpicpiB187
CSPI06G12950	Cucumber (Gy14) v1	cgycpiB570
CSPI06G12950	Cucurbita maxima (Rimu)	cmacpiB138
CSPI06G12950	Cucurbita maxima (Rimu)	cmacpiB562
CSPI06G12950	Cucurbita maxima (Rimu)	cmacpiB637
CSPI06G12950	Cucurbita moschata (Rifu)	cmocpiB127
CSPI06G12950	Cucurbita moschata (Rifu)	cmocpiB518
CSPI06G12950	Cucurbita moschata (Rifu)	cmocpiB550
CSPI06G12950	Cucurbita moschata (Rifu)	cmocpiB630
CSPI06G12950	Cucurbita moschata (Rifu)	cmocpiB640
CSPI06G12950	Cucumber (Chinese Long) v2	cpicuB314
CSPI06G12950	Cucumber (Chinese Long) v2	cpicuB318
CSPI06G12950	Melon (DHL92) v3.5.1	cpimeB437
CSPI06G12950	Melon (DHL92) v3.5.1	cpimeB495
CSPI06G12950	Watermelon (Charleston Gray)	cpiwcgB460
CSPI06G12950	Watermelon (97103) v1	cpiwmB532
CSPI06G12950	Cucurbita pepo (Zucchini)	cpecpiB295
CSPI06G12950	Cucurbita pepo (Zucchini)	cpecpiB746
CSPI06G12950	Bottle gourd (USVL1VR-Ls)	cpilsiB419
CSPI06G12950	Bottle gourd (USVL1VR-Ls)	cpilsiB433
CSPI06G12950	Melon (DHL92) v3.6.1	cpimedB415
CSPI06G12950	Melon (DHL92) v3.6.1	cpimedB429
CSPI06G12950	Melon (DHL92) v3.6.1	cpimedB482
CSPI06G12950	Cucumber (Gy14) v2	cgybcpiB288
CSPI06G12950	Cucumber (Gy14) v2	cgybcpiB292
CSPI06G12950	Silver-seed gourd	carcpiB0027
CSPI06G12950	Silver-seed gourd	carcpiB0426
CSPI06G12950	Silver-seed gourd	carcpiB0568
CSPI06G12950	Cucumber (Chinese Long) v3	cpicucB364
CSPI06G12950	Cucumber (Chinese Long) v3	cpicucB369
CSPI06G12950	Watermelon (97103) v2	cpiwmbB453
CSPI06G12950	Wax gourd	cpiwgoB573
CSPI06G12950	Wax gourd	cpiwgoB612