CSPI06G12640 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAGTCCAATAATCCACCAACTAAAGCCCAAATGAAGATTCTGAGTTCGCTACGCCATTTCCTTCCAATTCTTCCAGCCAAATCTTTCGATCATCAACCAATTTCACAGCCACCAATTAGCAATTTTCAATTTGACACTTGACGATCTTGTATCAGCTACGCTTATCCATGGCGTCCGCAATTCTGAAGCGAGTCAGCGCCTCCGCAATGAGCTCGCTGGTTGAATCTATACGAATCGGAGCTTCATCGCGAAACTTTGCAGCGGTGGCGGTCGGGACTGACATCGTCTCCGCCGCACCGGACGTTTCTCTCCAGAAGGCTCGGAGCTGGGATGAAGGTGTCTCCTCCAAGTTCTCGACCACTCCGCTTAAAGACATTTTCAAGGTCTGTTTTTCGATTCTTCGTGTATTTCTATCTCTTGTTCTATCCTGAGGTTGATTGTGTTAATATTGGCTGTTCATAAAATAGAAGACGTTAAAAGCCACATTTGAGCTTAAATTTTATGTTCTATGTTTACATTGAATGATGCTTTTAGTCGAGTTATTCTTATCTTATTGATTCATTCGTCATGATATTTCAGGGCAAGAAGGTCGTTATCTTTGGGCTTCCTGTAAGTCAATCTATGTAGTCTTTTACTAATGTATAAATATACGCTATGGAAATCATGAATTCTTTAGCAAATAGTTGCCGATTTATATGTCTTCATATCTTTTTCTCGTATTGTGTTCTTTGTTCTGGACAAGAACTTTCATGATCAATGGCTTCATCCATTAGTGAAATGAGGATTTATTTAGGGATCAGAAACGGTGTTCCGTGGGTTACCATTCATTTTTGACCTCTAAAAAGATTGATCAGACACTAAGGAAGAATAATTGTTAAACCAGAGAAGATATGATCTTTATTTTGTACTTGGTAGAGAATTCTAGAATTTAAAGAGTTATCAACATTAGGCGATTCATTGCGATAAAATTTAAACCCAGTGGATCTTTATTCTAGTTTTAATCAGTTGTTGGAGTTACCCTATGGGACTTTGGTAGCTCATTTATTTTCTTCGATAACTTAGAATTGACTTTCTATCTGGAAAATTTAAAATATGGAAACAAGCTGCTTGTTGTATTATCAACATTTAGCACTTTTGAAGTATGACGTTAGAGGTTTTTGTTAGTATAACATTTAGCATTTTTGAAGTATAACGTTAAAGGTTTTTGTCATATAGTTCGATCTTTGATGAACATGGAGTAGATATAGCTGCTATTTCTCTGGGTTTGTCACTGTTAAATAAGTTAATTATATGTTGCAGATTTTAAAGTTGTTATACAAATTTCCAGGGTGCATATACAGGAGTTTGTTCCCAGCAGCACGTTCCTAGTTACAAGAATAAAATTGATGAGTTAAAGGCTAAAGGAATTGATTCTGTTATTTGTGTGTCTGTTAATGATCCATATACTCTCAATGGCTGGGCTGAGAAAATTCAAGCCAAAGATGCTGTAAGCTTCCTTGACCAAATTTATTTAAAAACTGCATAATGTTTTTTAGGCTGTGTGTTGCTATATACTTAATTAGTTTGCATCTGACGGCTAAATTAGTTATTTGTATGTAAGAACTATTTTCCTTTCTAACTATAACGGCCTATTCTGATTTGCGTCACTTATTCCTGTAATTATCCTCTATATTGCAATATAGATTCAATTTTTTGGGGACTTCGATGGGAAATTTCACAAAAGCTTGGAACTGGATAAAGATCTTTCTGTTGCTTTGCTCGGTCCTCGTTCTGAAAGGTATGATCAATCTTGTCTTTGACATACCAAGAAATTTCTGGATTTTGATTATTCAAGCCTTGTTAATATCATTTGTTTTTTTTTAATTAAGTCTATAAACACTCCTTCCATCACTAAATTTCTTTGTTATCTACTTTTATCAATGTTTCGATTAAATCGAGCGAAGTTTTGAAAACTAAAACAAAAAAAAGGTTTTTTAAGCTTGTTTTTGTTTCTTAACTGTGACTAAGAATTCAGATACAAATTATTATAAAAAAATTGAGAGAAAATAACCTTAATTTTTAAATTCAAAAAAAAAAAAACAAAATGTTTAACTAATGAAGTCTTAATTTTAGTTTTGAGTCTTTGAGAATTAAGCTTACGAATGTAGAGTCATTTTGTTTTATTATCTAATTGTAAGGAGGTTTTCATAATTTGAGCTAAGTTTTGACAACTAGAAAAAGGTTATTTTTTATATGGGTCCAAGTAGGTAGACATTTGTATACTATTTGACATTGTTCTTATTTGTTAGATGGTCAGCATATGTTGTCGATGGAAAGGTTAAGGCTCTTAACGTAGAGGAAGCTCCATCTGACTTTAAGGTTACTGGGGCAGATGTCATTTTGAATCAAATTTAGAGTCAGTTTCCAACACAAGCTCTTGGGTTCCGAATAAGACCATGCATGTAAATGGGTTATGTATTCCAGAGGTTTTCGTTCCTTTTTGGTTGTTCTTTTGCTGAAGTAAATCCCAAGTGACAATTGCTTGGATCCTTGCCTTTCACTTATTGTTCTTCATAAATTAAATGGTTCCAACTTGGATTTAGAAACTCAGATAATTCTTTGTTCAAACAAGGACTTCTGGATTCGAATATGATCCCTAAACCCTAAACTCTAACCATAGAATAAGAATAAACGATGAGATGTTCTCTTCTCCCGTTAAGGGTGTGGAGAAAGTTTTAGGTTTGAACTGATTGATAACGTGAAATGTCAGTATCAAGGTGAGTGAATTTCTCTATCAATTCATTGGGATATAATAGGAAACCTTTACTAAAAGTTTTTTGATATGTACTCTAGTACTGTACTGAAGTTAAGGTGCTGGGTGGATTTCAATTTTTTAATTTTAAGTTCAACTACTGCAGCATTGAGGTGATTGGAATCCAACTTTTTGGAATAGTAATTAATTTGTAAACATTTATTCACTGAGAATTTCAACCTTTTCTTTAGAGGTGCAAATTGGGGGTAAGCTCTTGTTAGAATTTAAGAATTTCAACTTACAAACTTATGTTATAG ATGGCGTCCGCAATTCTGAAGCGAGTCAGCGCCTCCGCAATGAGCTCGCTGGTTGAATCTATACGAATCGGAGCTTCATCGCGAAACTTTGCAGCGGTGGCGGTCGGGACTGACATCGTCTCCGCCGCACCGGACGTTTCTCTCCAGAAGGCTCGGAGCTGGGATGAAGGTGTCTCCTCCAAGTTCTCGACCACTCCGCTTAAAGACATTTTCAAGGGCAAGAAGGTCGTTATCTTTGGGCTTCCTGGTGCATATACAGGAGTTTGTTCCCAGCAGCACGTTCCTAGTTACAAGAATAAAATTGATGAGTTAAAGGCTAAAGGAATTGATTCTGTTATTTGTGTGTCTGTTAATGATCCATATACTCTCAATGGCTGGGCTGAGAAAATTCAAGCCAAAGATGCTATTCAATTTTTTGGGGACTTCGATGGGAAATTTCACAAAAGCTTGGAACTGGATAAAGATCTTTCTGTTGCTTTGCTCGGTCCTCGTTCTGAAAGATGGTCAGCATATGTTGTCGATGGAAAGGTTAAGGCTCTTAACGTAGAGGAAGCTCCATCTGACTTTAAGGTTACTGGGGCAGATGTCATTTTGAATCAAATTTAG ATGGCGTCCGCAATTCTGAAGCGAGTCAGCGCCTCCGCAATGAGCTCGCTGGTTGAATCTATACGAATCGGAGCTTCATCGCGAAACTTTGCAGCGGTGGCGGTCGGGACTGACATCGTCTCCGCCGCACCGGACGTTTCTCTCCAGAAGGCTCGGAGCTGGGATGAAGGTGTCTCCTCCAAGTTCTCGACCACTCCGCTTAAAGACATTTTCAAGGGCAAGAAGGTCGTTATCTTTGGGCTTCCTGGTGCATATACAGGAGTTTGTTCCCAGCAGCACGTTCCTAGTTACAAGAATAAAATTGATGAGTTAAAGGCTAAAGGAATTGATTCTGTTATTTGTGTGTCTGTTAATGATCCATATACTCTCAATGGCTGGGCTGAGAAAATTCAAGCCAAAGATGCTATTCAATTTTTTGGGGACTTCGATGGGAAATTTCACAAAAGCTTGGAACTGGATAAAGATCTTTCTGTTGCTTTGCTCGGTCCTCGTTCTGAAAGATGGTCAGCATATGTTGTCGATGGAAAGGTTAAGGCTCTTAACGTAGAGGAAGCTCCATCTGACTTTAAGGTTACTGGGGCAGATGTCATTTTGAATCAAATTTAG
BLAST of CSPI06G12640 vs. Swiss-Prot
Match: PRX2F_ARATH (Peroxiredoxin-2F, mitochondrial OS=Arabidopsis thaliana GN=PRXIIF PE=1 SV=2) HSP 1 Score: 327.0 bits (837), Expect = 1.4e-88 Identity = 163/201 (81.09%), Postives = 177/201 (88.06%), Query Frame = 1
BLAST of CSPI06G12640 vs. Swiss-Prot
Match: PRX2F_ORYSJ (Peroxiredoxin-2F, mitochondrial OS=Oryza sativa subsp. japonica GN=PRXIIF PE=2 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 3.5e-79 Identity = 146/201 (72.64%), Postives = 170/201 (84.58%), Query Frame = 1
BLAST of CSPI06G12640 vs. Swiss-Prot
Match: PRX2C_ORYSJ (Peroxiredoxin-2C OS=Oryza sativa subsp. japonica GN=PRXIIC PE=1 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 5.4e-27 Identity = 67/171 (39.18%), Postives = 97/171 (56.73%), Query Frame = 1
BLAST of CSPI06G12640 vs. Swiss-Prot
Match: PR2E1_ORYSJ (Peroxiredoxin-2E-1, chloroplastic OS=Oryza sativa subsp. japonica GN=PRXIIE-1 PE=2 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.7e-26 Identity = 69/200 (34.50%), Postives = 113/200 (56.50%), Query Frame = 1
BLAST of CSPI06G12640 vs. Swiss-Prot
Match: PRX2B_ARATH (Peroxiredoxin-2B OS=Arabidopsis thaliana GN=PRXIIB PE=1 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.7e-25 Identity = 65/171 (38.01%), Postives = 98/171 (57.31%), Query Frame = 1
BLAST of CSPI06G12640 vs. TrEMBL
Match: A0A0A0KB73_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G153480 PE=4 SV=1) HSP 1 Score: 392.9 bits (1008), Expect = 2.4e-106 Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 1
BLAST of CSPI06G12640 vs. TrEMBL
Match: A0A067KVF3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02125 PE=4 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 2.6e-89 Identity = 161/201 (80.10%), Postives = 183/201 (91.04%), Query Frame = 1
BLAST of CSPI06G12640 vs. TrEMBL
Match: A0A061EL45_THECC (Peroxiredoxin IIF OS=Theobroma cacao GN=TCM_020545 PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 1.3e-88 Identity = 162/201 (80.60%), Postives = 183/201 (91.04%), Query Frame = 1
BLAST of CSPI06G12640 vs. TrEMBL
Match: B9RTW9_RICCO (Peroxiredoxin, putative OS=Ricinus communis GN=RCOM_0913560 PE=4 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 1.1e-87 Identity = 161/201 (80.10%), Postives = 182/201 (90.55%), Query Frame = 1
BLAST of CSPI06G12640 vs. TrEMBL
Match: W9QVC2_9ROSA (Peroxiredoxin-2F OS=Morus notabilis GN=L484_007342 PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 7.2e-87 Identity = 164/209 (78.47%), Postives = 182/209 (87.08%), Query Frame = 1
BLAST of CSPI06G12640 vs. TAIR10
Match: AT3G06050.1 (AT3G06050.1 peroxiredoxin IIF) HSP 1 Score: 327.0 bits (837), Expect = 8.1e-90 Identity = 163/201 (81.09%), Postives = 177/201 (88.06%), Query Frame = 1
BLAST of CSPI06G12640 vs. TAIR10
Match: AT1G65980.1 (AT1G65980.1 thioredoxin-dependent peroxidase 1) HSP 1 Score: 117.5 bits (293), Expect = 9.7e-27 Identity = 65/171 (38.01%), Postives = 98/171 (57.31%), Query Frame = 1
BLAST of CSPI06G12640 vs. TAIR10
Match: AT1G60740.1 (AT1G60740.1 Thioredoxin superfamily protein) HSP 1 Score: 116.7 bits (291), Expect = 1.7e-26 Identity = 56/143 (39.16%), Postives = 83/143 (58.04%), Query Frame = 1
BLAST of CSPI06G12640 vs. TAIR10
Match: AT1G65970.1 (AT1G65970.1 thioredoxin-dependent peroxidase 2) HSP 1 Score: 114.4 bits (285), Expect = 8.2e-26 Identity = 55/143 (38.46%), Postives = 82/143 (57.34%), Query Frame = 1
BLAST of CSPI06G12640 vs. TAIR10
Match: AT3G52960.1 (AT3G52960.1 Thioredoxin superfamily protein) HSP 1 Score: 109.4 bits (272), Expect = 2.7e-24 Identity = 59/177 (33.33%), Postives = 95/177 (53.67%), Query Frame = 1
BLAST of CSPI06G12640 vs. NCBI nr
Match: gi|449463086|ref|XP_004149265.1| (PREDICTED: peroxiredoxin-2F, mitochondrial [Cucumis sativus]) HSP 1 Score: 392.9 bits (1008), Expect = 3.4e-106 Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 1
BLAST of CSPI06G12640 vs. NCBI nr
Match: gi|659117372|ref|XP_008458567.1| (PREDICTED: peroxiredoxin-2F, mitochondrial [Cucumis melo]) HSP 1 Score: 390.2 bits (1001), Expect = 2.2e-105 Identity = 198/201 (98.51%), Postives = 199/201 (99.00%), Query Frame = 1
BLAST of CSPI06G12640 vs. NCBI nr
Match: gi|802580347|ref|XP_012069555.1| (PREDICTED: peroxiredoxin-2F, mitochondrial [Jatropha curcas]) HSP 1 Score: 336.3 bits (861), Expect = 3.8e-89 Identity = 161/201 (80.10%), Postives = 183/201 (91.04%), Query Frame = 1
BLAST of CSPI06G12640 vs. NCBI nr
Match: gi|729365297|ref|XP_010546853.1| (PREDICTED: peroxiredoxin-2F, mitochondrial [Tarenaya hassleriana]) HSP 1 Score: 335.9 bits (860), Expect = 4.9e-89 Identity = 166/201 (82.59%), Postives = 177/201 (88.06%), Query Frame = 1
BLAST of CSPI06G12640 vs. NCBI nr
Match: gi|470121747|ref|XP_004296922.1| (PREDICTED: peroxiredoxin-2F, mitochondrial [Fragaria vesca subsp. vesca]) HSP 1 Score: 334.3 bits (856), Expect = 1.4e-88 Identity = 166/201 (82.59%), Postives = 182/201 (90.55%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|