CSPI06G12590 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACAAAAGTTATTATTGTTATTATTTTTATAAAATGAAAAATGAAAAATGAAAAATGAAAAGAAAAGAAGGCAGTAAAATTAATTTATAATAAATAACAAATTCAATTAACACGAGACATTTAAAAACAAAACAAAATTAAATACGAAGGAAAGAAAGAAGAAAGAAAGAAAGAACGAAAGAACGAAAGAGAAGAGCGAAGGCAAGAAAGGAAATTGTCTGGAACTTTCTTCCAGACCCAAAAGGAATCTCCAAAACAACTCACAACCGCCCTTCTCCCTCTTGTCGCTTCTTCTCATTTTCTTCCTTTATAATTCTCTACCAGATTCCTTCTTTCTTTCTTCCTTCATACCTATATCGCTTCTTCAATTTCTATATTCACTTTCCTCCCTCCATTCAATCATCGCAACACAGGTAATTTCATGATTACTCTCTTTCACTCTTTTTTTTTTTCTTCTTCTTCTTCTTCTTCTTTTTTCCATGTCTTCTCCTTCGTGTTTCTGATCTGTTTGTTTTTAGATTTTGTTATTTTAGGTATTGTTGTTTTAATTATCAATCCATGGCTGAAGAACATAGATGCCAAGCGCCCAAGCTTTGTGCGAACAATTGCGGGTTCTTTGGCAGTCCCGCCACAAGAGATTTCTGTTCTAAATGTTACCGAGATCTGCAGTTGAAGGAACAACAATCCTCCACCGCTAAACTCGCCTTAAACCAAACCCTGGCGGCGTCGTTGTTGTTAAATCCGGAACCGAAAGCGAAGGAACAACGCGTGGAGGAGGAAGAGGAGGTGAGGACGGAAGTGGTTCGGACGGCAGCGGCGGAGGAAAGACAACAACAGCAGCCGAGCCGATGTATGACGTGCAGGCGGCGCGTGGGGTTGACGGGGTTCAAGTGCCGGTGTGGGATGGTGTATTGTGGGAGTCACCGGTACCCGGAACAACACGGGTGTGAATTTGACTTCAAGCAGATGGGAAAGGAGCAGATCGCGAAGGCGAATCCGGTGGTGAAAGGGGAGAAACTGCAGAAGATTTGAGGGAAGGAAATTAAAGGGGGTAAAATTGTCTTATTTTTCTTCATCTTGGTTTGGTATATGTCTCTTTCGTGTGGTAAGGGCCAGCGCGTGGCGCGGGACCTGGTGGACCATTTCGAAAAATATTGGTGGGTTGGTTGGTTGTATAAAATTAATATTCAAATAATATGAGTCTTCTATACATTTCAAATTTCTATTGCTACATAATAATGCTTTTATTGTTTGGTTCATTCATTCTCATTCTCATTCTCATCCACATCAATATAATAAATAAATAAATAATTTTAATTGATG ATGGCTGAAGAACATAGATGCCAAGCGCCCAAGCTTTGTGCGAACAATTGCGGGTTCTTTGGCAGTCCCGCCACAAGAGATTTCTGTTCTAAATGTTACCGAGATCTGCAGTTGAAGGAACAACAATCCTCCACCGCTAAACTCGCCTTAAACCAAACCCTGGCGGCGTCGTTGTTGTTAAATCCGGAACCGAAAGCGAAGGAACAACGCGTGGAGGAGGAAGAGGAGGTGAGGACGGAAGTGGTTCGGACGGCAGCGGCGGAGGAAAGACAACAACAGCAGCCGAGCCGATGTATGACGTGCAGGCGGCGCGTGGGGTTGACGGGGTTCAAGTGCCGGTGTGGGATGGTGTATTGTGGGAGTCACCGGTACCCGGAACAACACGGGTGTGAATTTGACTTCAAGCAGATGGGAAAGGAGCAGATCGCGAAGGCGAATCCGGTGGTGAAAGGGGAGAAACTGCAGAAGATTTGA ATGGCTGAAGAACATAGATGCCAAGCGCCCAAGCTTTGTGCGAACAATTGCGGGTTCTTTGGCAGTCCCGCCACAAGAGATTTCTGTTCTAAATGTTACCGAGATCTGCAGTTGAAGGAACAACAATCCTCCACCGCTAAACTCGCCTTAAACCAAACCCTGGCGGCGTCGTTGTTGTTAAATCCGGAACCGAAAGCGAAGGAACAACGCGTGGAGGAGGAAGAGGAGGTGAGGACGGAAGTGGTTCGGACGGCAGCGGCGGAGGAAAGACAACAACAGCAGCCGAGCCGATGTATGACGTGCAGGCGGCGCGTGGGGTTGACGGGGTTCAAGTGCCGGTGTGGGATGGTGTATTGTGGGAGTCACCGGTACCCGGAACAACACGGGTGTGAATTTGACTTCAAGCAGATGGGAAAGGAGCAGATCGCGAAGGCGAATCCGGTGGTGAAAGGGGAGAAACTGCAGAAGATTTGA
BLAST of CSPI06G12590 vs. Swiss-Prot
Match: SAP3_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabidopsis thaliana GN=SAP3 PE=2 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 7.4e-48 Identity = 98/166 (59.04%), Postives = 122/166 (73.49%), Query Frame = 1
BLAST of CSPI06G12590 vs. Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2) HSP 1 Score: 174.5 bits (441), Expect = 9.3e-43 Identity = 90/173 (52.02%), Postives = 113/173 (65.32%), Query Frame = 1
BLAST of CSPI06G12590 vs. Swiss-Prot
Match: SAP4_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 6.2e-39 Identity = 83/163 (50.92%), Postives = 108/163 (66.26%), Query Frame = 1
BLAST of CSPI06G12590 vs. Swiss-Prot
Match: SAP5_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Oryza sativa subsp. japonica GN=SAP5 PE=2 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.0e-33 Identity = 76/157 (48.41%), Postives = 96/157 (61.15%), Query Frame = 1
BLAST of CSPI06G12590 vs. Swiss-Prot
Match: SAP7_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana GN=SAP7 PE=1 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 1.5e-32 Identity = 71/160 (44.38%), Postives = 99/160 (61.88%), Query Frame = 1
BLAST of CSPI06G12590 vs. TrEMBL
Match: A0A0A0KB65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G152950 PE=4 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 7.6e-84 Identity = 156/157 (99.36%), Postives = 157/157 (100.00%), Query Frame = 1
BLAST of CSPI06G12590 vs. TrEMBL
Match: V7BZK7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G125000g PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 6.9e-53 Identity = 107/159 (67.30%), Postives = 126/159 (79.25%), Query Frame = 1
BLAST of CSPI06G12590 vs. TrEMBL
Match: A0A0D2TG59_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G086500 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 7.7e-52 Identity = 111/176 (63.07%), Postives = 125/176 (71.02%), Query Frame = 1
BLAST of CSPI06G12590 vs. TrEMBL
Match: I1LTU6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G183800 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 1.7e-51 Identity = 105/160 (65.62%), Postives = 122/160 (76.25%), Query Frame = 1
BLAST of CSPI06G12590 vs. TrEMBL
Match: A0A0L9UNE6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g169200 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 5.0e-51 Identity = 103/157 (65.61%), Postives = 118/157 (75.16%), Query Frame = 1
BLAST of CSPI06G12590 vs. TAIR10
Match: AT2G27580.1 (AT2G27580.1 A20/AN1-like zinc finger family protein) HSP 1 Score: 191.4 bits (485), Expect = 4.2e-49 Identity = 98/166 (59.04%), Postives = 122/166 (73.49%), Query Frame = 1
BLAST of CSPI06G12590 vs. TAIR10
Match: AT3G52800.1 (AT3G52800.1 A20/AN1-like zinc finger family protein) HSP 1 Score: 174.5 bits (441), Expect = 5.2e-44 Identity = 90/173 (52.02%), Postives = 113/173 (65.32%), Query Frame = 1
BLAST of CSPI06G12590 vs. TAIR10
Match: AT2G36320.1 (AT2G36320.1 A20/AN1-like zinc finger family protein) HSP 1 Score: 161.8 bits (408), Expect = 3.5e-40 Identity = 83/163 (50.92%), Postives = 108/163 (66.26%), Query Frame = 1
BLAST of CSPI06G12590 vs. TAIR10
Match: AT4G12040.1 (AT4G12040.1 A20/AN1-like zinc finger family protein) HSP 1 Score: 140.6 bits (353), Expect = 8.4e-34 Identity = 71/160 (44.38%), Postives = 99/160 (61.88%), Query Frame = 1
BLAST of CSPI06G12590 vs. TAIR10
Match: AT1G12440.1 (AT1G12440.1 A20/AN1-like zinc finger family protein) HSP 1 Score: 140.2 bits (352), Expect = 1.1e-33 Identity = 72/159 (45.28%), Postives = 104/159 (65.41%), Query Frame = 1
BLAST of CSPI06G12590 vs. NCBI nr
Match: gi|449463078|ref|XP_004149261.1| (PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Cucumis sativus]) HSP 1 Score: 317.8 bits (813), Expect = 1.1e-83 Identity = 156/157 (99.36%), Postives = 157/157 (100.00%), Query Frame = 1
BLAST of CSPI06G12590 vs. NCBI nr
Match: gi|659117390|ref|XP_008458577.1| (PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Cucumis melo]) HSP 1 Score: 283.1 bits (723), Expect = 3.0e-73 Identity = 147/167 (88.02%), Postives = 151/167 (90.42%), Query Frame = 1
BLAST of CSPI06G12590 vs. NCBI nr
Match: gi|593699234|ref|XP_007150082.1| (hypothetical protein PHAVU_005G125000g [Phaseolus vulgaris]) HSP 1 Score: 214.9 bits (546), Expect = 9.9e-53 Identity = 107/159 (67.30%), Postives = 126/159 (79.25%), Query Frame = 1
BLAST of CSPI06G12590 vs. NCBI nr
Match: gi|950957142|ref|XP_014496999.1| (PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Vigna radiata var. radiata]) HSP 1 Score: 211.8 bits (538), Expect = 8.4e-52 Identity = 104/157 (66.24%), Postives = 119/157 (75.80%), Query Frame = 1
BLAST of CSPI06G12590 vs. NCBI nr
Match: gi|823219459|ref|XP_012442465.1| (PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Gossypium raimondii]) HSP 1 Score: 211.5 bits (537), Expect = 1.1e-51 Identity = 111/176 (63.07%), Postives = 125/176 (71.02%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|