CSPI06G12190 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G12190
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	AT hook motif DNA-binding family protein
Location	Chr6 : 10695244 .. 10696676 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTTCGACCCCCCGGTAACTTCATGGTTAGACATGAATCTTCGGATAGTGATAATATCGGTGATGGAGAAATCGACGAGGAATTTAGACATGGTGAACTGAGCGCCGAGAAGCAAATTTCGATGAAAAAGAGAAAAGGAAGGCCGAGGAAATTTAACGACGCCGTCGACCGCCGAGATCCACAGTCCACTCCAGACTCACAAACCAAACCCGAACGCCGTCGTGGCCCCCGCCCTGGTCTCAGTATATCGCAGGTTCTCGCAACGTTAGGTACGTACGCTAGCGATTATTCTTGTTTCTTTCCATCGCTCGCCCCCTCCTCCGCCGTAACCGTTAGTTTCTTTTCTTTCTTTCTTTTACGTCATTTTCTTTTTACTTTTCATTTCTTTCCCTTCTTTCTTTAATTTATTATTATTATTTTTCTTCTAAAACTTAAACTACAAATTTAGAAATATATAATAAAACCTAAAGATTTCGAATATTGATCAAATTGCATGAACTAAATTTTAACTACAAGATTGAAGTATAATAAAAAATAAAAATTGATTGATTTGGTTAAATAGTAATCACTCCTCCTTTCCTTGTAATAAATAATGATTAAATTAAGAAGTTCTTATAGCAAATAGAAAAAAAATTAAAATTATTTATCCAATATTCTTTTTAATAAAAATAAACTAATTTGTTATATTTATAATAATGAAGGTTGTTACGCATGGGAGACAATTGGGAGAGATTTTATCCCTCACGTCGTTCTCGTTGCACCTAGAGAGGCATGTATATTTTAGGTGTATGTTTCTATTAATGTTATAGATAGATATTCATTCAAAGTTTACGTGAAATTTCGTTATATTTTATAAATATTTTAATTTATTTTACTATATTTGTAAATGTTCCATAAGTAATCTTACTATGATTTAAATTTTTTAAAAAAATTTATTAATAACATGGTATATATTTAATCTTGAATGTGTGACAGAATATTGTGGATAGAATATCAAACTTCAAAGTGCCAGGACGTCGATCAATTTGCATAATTTCTGCTTATGGTTCAGTTTCGTCTGTTATTATCCATAAACCCAATACTGTTGCCTCAATACTTAGATTCGAGGTGTTCATCTTCTTTACTCACTTATCTATATATCAATTCTTTTTCATTATTTGAAACATTATTTCTCTTTTATTCTGGTAATTCCTAGTTTTAATTTTAATTTTAATTTTATGTTTTATTGAATATATAACTAATCATATATAATATAATTTATGTGTGTAATTATAGGGTATGTTTGAGATATTACAACTGTCTGGATGGTTTGATGGAAGAGATAATAAAAAACAGATGACTATATCATTTTCTACATCCAATGGCCAAGTTTTTGGTGGCATCATCGTCCGTTCACGACTCATAGCAGCAACTCCTGTTCAGGTATAG

mRNA sequence

ATGGAGCTTCGACCCCCCGGTAACTTCATGGTTAGACATGAATCTTCGGATAGTGATAATATCGGTGATGGAGAAATCGACGAGGAATTTAGACATGGTGAACTGAGCGCCGAGAAGCAAATTTCGATGAAAAAGAGAAAAGGAAGGCCGAGGAAATTTAACGACGCCGTCGACCGCCGAGATCCACAGTCCACTCCAGACTCACAAACCAAACCCGAACGCCGTCGTGGCCCCCGCCCTGGTCTCAGTATATCGCAGGTTCTCGCAACGTTAGGTACGTACGCTAGCGATTATTCTTGTTTCTTTCCATCGCTCGCCCCCTCCTCCGCCGTAACCAATATTGTGGATAGAATATCAAACTTCAAAGTGCCAGGACGTCGATCAATTTGCATAATTTCTGCTTATGGTTCAGTTTCGTCTGTTATTATCCATAAACCCAATACTGTTGCCTCAATACTTAGATTCGAGGGTATGTTTGAGATATTACAACTGTCTGGATGGTTTGATGGAAGAGATAATAAAAAACAGATGACTATATCATTTTCTACATCCAATGGCCAAGTTTTTGGTGGCATCATCGTCCGTTCACGACTCATAGCAGCAACTCCTGTTCAGGTATAG

Coding sequence (CDS)

ATGGAGCTTCGACCCCCCGGTAACTTCATGGTTAGACATGAATCTTCGGATAGTGATAATATCGGTGATGGAGAAATCGACGAGGAATTTAGACATGGTGAACTGAGCGCCGAGAAGCAAATTTCGATGAAAAAGAGAAAAGGAAGGCCGAGGAAATTTAACGACGCCGTCGACCGCCGAGATCCACAGTCCACTCCAGACTCACAAACCAAACCCGAACGCCGTCGTGGCCCCCGCCCTGGTCTCAGTATATCGCAGGTTCTCGCAACGTTAGGTACGTACGCTAGCGATTATTCTTGTTTCTTTCCATCGCTCGCCCCCTCCTCCGCCGTAACCAATATTGTGGATAGAATATCAAACTTCAAAGTGCCAGGACGTCGATCAATTTGCATAATTTCTGCTTATGGTTCAGTTTCGTCTGTTATTATCCATAAACCCAATACTGTTGCCTCAATACTTAGATTCGAGGGTATGTTTGAGATATTACAACTGTCTGGATGGTTTGATGGAAGAGATAATAAAAAACAGATGACTATATCATTTTCTACATCCAATGGCCAAGTTTTTGGTGGCATCATCGTCCGTTCACGACTCATAGCAGCAACTCCTGTTCAGGTATAG

Homology

[Close]

BLAST of CSPI06G12190 vs. Swiss-Prot
Match: AHL7_ARATH (AT-hook motif nuclear-localized protein 7 OS=Arabidopsis thaliana GN=AHL7 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.3e-14
Identity = 63/186 (33.87%), Postives = 94/186 (50.54%), Query Frame = 1


Query: 40  QISMKKRKGRPRKFNDAVDRRDPQSTPDSQTKPERRRGPRPGLSISQVLATLGTYASDY- 99
           + S KKR+GRPRK+          S P      +R RG   G  + ++  T+G ++S   
Sbjct: 52  EASGKKRRGRPRKYEANGAPLPSSSVP---LVKKRVRGKLNGFDMKKMHKTIGFHSSGER 111

Query: 100 ------------SCFFPSLAPSSAVTNIVDRISNFKVPGRRSICIISAYGSVSSVIIHKP 159
                       S F P +   +   +I  RI +F   G R+ICI+SA G +S+V + +P
Sbjct: 112 FGVGGGVGGGVGSNFTPHVITVNTGEDITMRIISFSQQGPRAICILSANGVISNVTLRQP 171

Query: 160 NTVASILRFEGMFEILQLSGWFDGRDNKKQ------MTISFSTSNGQVFGGIIVRSRLIA 207
           ++    L +EG FEIL LSG F   +N+        M++S +  +G+V GG  V   LIA
Sbjct: 172 DSCGGTLTYEGRFEILSLSGSFMETENQGSKGRSGGMSVSLAGPDGRVVGG-GVAGLLIA 231

[Close]

BLAST of CSPI06G12190 vs. Swiss-Prot
Match: AHL9_ARATH (AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana GN=AHL9 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.7e-13
Identity = 60/179 (33.52%), Postives = 97/179 (54.19%), Query Frame = 1


Query: 43  MKKRKGRPRKFND------AVDRRDPQS-TPDSQTKPERRRGPRPGLSISQVLATLGTY- 102
           MK+++GRPRK+        A+      + TP++  K  R RG  PG    Q +A++G   
Sbjct: 97  MKRKRGRPRKYGQDGSVSLALSSSSVSTITPNNSNK--RGRGRPPGSGKKQRMASVGELM 156

Query: 103 -ASDYSCFFPSLAPSSAVTNIVDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASIL 162
            +S    F P +   S   +I  ++  F   G R+IC++SA G+VS+  + +P+     +
Sbjct: 157 PSSSGMSFTPHVIAVSIGEDIASKVIAFSQQGPRAICVLSASGAVSTATLIQPSASPGAI 216

Query: 163 RFEGMFEILQLSGWF----DG--RDNKKQMTISFSTSNGQVFGGIIVRSRLIAATPVQV 207
           ++EG FEIL LS  +    DG  R+    +++S ++ +G+V GG I    LIAA+PVQV
Sbjct: 217 KYEGRFEILALSTSYIVATDGSFRNRTGNLSVSLASPDGRVIGGAI-GGPLIAASPVQV 272

[Close]

BLAST of CSPI06G12190 vs. Swiss-Prot
Match: AHL5_ARATH (AT-hook motif nuclear-localized protein 5 OS=Arabidopsis thaliana GN=AHL5 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-12
Identity = 61/189 (32.28%), Postives = 92/189 (48.68%), Query Frame = 1


Query: 39  KQISMKKRKGRPRKF------------NDAVDRRDPQSTPDSQTK-PERRRGPRPGLSIS 98
           +Q  +KK++GRPRK+               V ++   S+  S    P+R RG  PG    
Sbjct: 100 EQPMVKKKRGRPRKYVPDGQVSLGLSPMPCVSKKSKDSSSMSDPNAPKRARGRPPGTGRK 159

Query: 99  QVLATLGTYASDYS--CFFPSLAPSSAVTNIVDRISNFKVPGRRSICIISAYGSVSSVII 158
           Q LA LG + +  +   F P +    +  +IV ++ +F     R++CI+S  G+VSSV +
Sbjct: 160 QRLANLGEWMNTSAGLAFAPHVISVGSGEDIVSKVLSFSQKRPRALCIMSGTGTVSSVTL 219

Query: 159 HKPNTVASILRFEGMFEILQLSGWF------DGRDNKKQMTISFSTSNGQVFGGIIVRSR 207
            +P +    L FEG FEIL L G +        +     +++S S   G V GG I    
Sbjct: 220 REPASTTPSLTFEGRFEILSLGGSYLVNEEGGSKSRTGGLSVSLSGPEGHVIGGGI--GM 279

[Close]

BLAST of CSPI06G12190 vs. Swiss-Prot
Match: AHL12_ARATH (AT-hook motif nuclear-localized protein 12 OS=Arabidopsis thaliana GN=AHL12 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.7e-12
Identity = 55/174 (31.61%), Postives = 89/174 (51.15%), Query Frame = 1


Query: 43  MKKRKGRPRKFNDA-VDRRDPQSTPDSQ-TKPERRRGPRPGLSISQVLATLGTYASDYS- 102
           +K+++GRPRK+ +  V  +   S+P S   +P+R RG  PG    Q LA LG + +  + 
Sbjct: 98  VKRKRGRPRKYGEPMVSNKSRDSSPMSDPNEPKRARGRPPGTGRKQRLANLGEWMNTSAG 157

Query: 103 -CFFPSLAPSSAVTNIVDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGM 162
             F P +    A  +I  ++ +F     R++CI+S  G++SSV + KP +    L +EG 
Sbjct: 158 LAFAPHVISIGAGEDIAAKVLSFSQQRPRALCIMSGTGTISSVTLCKPGSTDRHLTYEGP 217

Query: 163 FEILQLSGWF------DGRDNKKQMTISFSTSNGQVFGGIIVRSRLIAATPVQV 207
           FEI+   G +        R     +++S S  +G +  G +    LIAA  VQV
Sbjct: 218 FEIISFGGSYLVNEEGGSRSRTGGLSVSLSRPDGSIIAGGV--DMLIAANLVQV 269

[Close]

BLAST of CSPI06G12190 vs. Swiss-Prot
Match: AHL2_ARATH (AT-hook motif nuclear-localized protein 2 OS=Arabidopsis thaliana GN=AHL2 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 8.5e-12
Identity = 60/191 (31.41%), Postives = 95/191 (49.74%), Query Frame = 1


Query: 43  MKKRKGRPRKFN----------DAVDRRDPQSTP--DSQTKPERRRGPRPG-------LS 102
           +KKR+GRPRK+           + +    P ++   D  T  E+R   +P        + 
Sbjct: 71  IKKRRGRPRKYGHDGAAVTLSPNPISSAAPTTSHVIDFSTTSEKRGKMKPATPTPSSFIR 130

Query: 103 ISQVLATLGTYASDYSC--FFPSLAPSSAVTNIVDRISNFKVPGRRSICIISAYGSVSSV 162
               +  LG ++   +   F P +   +A  ++  RI +F   G  +IC++ A G VSSV
Sbjct: 131 PKYQVENLGEWSPSSAAANFTPHIITVNAGEDVTKRIISFSQQGSLAICVLCANGVVSSV 190

Query: 163 IIHKPNTVASILRFEGMFEILQLSGWF-----DG-RDNKKQMTISFSTSNGQVFGGIIVR 207
            + +P++    L +EG FEIL LSG F     DG R     M++S ++ +G+V GG  V 
Sbjct: 191 TLRQPDSSGGTLTYEGRFEILSLSGTFMPSDSDGTRSRTGGMSVSLASPDGRVVGG-GVA 250

[Close]

BLAST of CSPI06G12190 vs. TrEMBL
Match: A0A0A0KES5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G150510 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 5.7e-55
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1


Query: 1   MELRPPGNFMVRHESSDSDNIGDGEIDEEFRHGELSAEKQISMKKRKGRPRKFNDAVDRR 60
           MELRPPGNFMVRHESSDSDNIGDGEIDEEFRHGELSAEKQISMKKRKGRPRKFNDAVDRR
Sbjct: 1   MELRPPGNFMVRHESSDSDNIGDGEIDEEFRHGELSAEKQISMKKRKGRPRKFNDAVDRR 60

Query: 61  DPQSTPDSQTKPERRRGPRPGLSISQVLATLGTYASDYSCFFPSLAPSSAVT 113
           DPQSTPDSQTKPERRRGPRPGLSISQVLATLGTYASDYSCFFPSLAPSSAVT
Sbjct: 61  DPQSTPDSQTKPERRRGPRPGLSISQVLATLGTYASDYSCFFPSLAPSSAVT 112

[Close]

BLAST of CSPI06G12190 vs. TrEMBL
Match: A0A0A0KBM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G150520 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 3.0e-40
Identity = 117/219 (53.42%), Postives = 141/219 (64.38%), Query Frame = 1


Query: 1   MELRPPGNFMVRHESSDSDNIGDGE--------IDEEFRHGELSAEKQISMKKRKGRPRK 60
           ME +   NF V+HES+DS N+ DGE        ID+E R GE +  +  +MKKRK R  K
Sbjct: 1   MEPQDRINFTVKHESTDSYNMEDGEQSSIGDRVIDKEDRLGESTGGRTTTMKKRKERSTK 60

Query: 61  FNDAVDRRDPQSTPDSQTKPERRR-GPRPGLSISQVLATLGTYASDYSC--FFPSLAPSS 120
            ND +D ++P S+ DSQT P R   G  PG    QVLA+LG YA D     F P +   +
Sbjct: 61  -NDTIDGKNPSSSADSQTIPNRPPLGHPPGFGKLQVLASLGGYAWDTFSRDFTPHIILVA 120

Query: 121 AVTNIVDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGMFEILQLSGWFD 180
              NIV+RISNF VP  R++CIISA G VSS+IIH PN+VAS L+FEG FEILQLSGW  
Sbjct: 121 PGENIVNRISNFSVPRSRTVCIISAVGLVSSIIIHDPNSVASTLKFEGTFEILQLSGWSH 180

Query: 181 GRDNKKQMTISFSTSNG--QVFGGIIVRSRLIAATPVQV 207
             D+ + MTISFS  +G  QVFGG  V S LIAATPVQV
Sbjct: 181 EGDDIRLMTISFSKLDGRNQVFGG-AVASSLIAATPVQV 217

[Close]

BLAST of CSPI06G12190 vs. TrEMBL
Match: U5GMD3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s20060g PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.8e-16
Identity = 76/218 (34.86%), Postives = 116/218 (53.21%), Query Frame = 1


Query: 5   PPGNFMVRHESS---DSDNIGDGEIDEEFRHGELSAEKQISMKKRKGRPRKF----NDAV 64
           PPG+ +    S    + +N G G +      G     +  ++K+++GRPRK+    N   
Sbjct: 26  PPGSQVATGGSDPTLEPNNPGGGVVGGSGGSGSEGVVES-TVKRKRGRPRKYDVDANLVS 85

Query: 65  DRRDPQSTPDSQTKPERRRGPRP-GLSISQVLATLGTYASDYS--CFFPSLAPSSAVTNI 124
               PQ    S +  E+R   RP G    Q+LA+LG +A++ +   F P + P     +I
Sbjct: 86  SPPPPQGLSSSLSSYEKRGRGRPRGSGKLQLLASLGGFAAETAGGSFTPHVVPVYTGEDI 145

Query: 125 VDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGMFEILQLSGWF----DG 184
           V +I      G R++CI+SA G VSSVI+ +P     ILR++G FEIL LSG F     G
Sbjct: 146 VSKIIELSQKGARAVCILSATGVVSSVIMRQPGPSGGILRYDGRFEILSLSGSFTFGETG 205

Query: 185 RDNKK--QMTISFSTSNGQVFGGIIVRSRLIAATPVQV 207
             N+K   +++S +  +G+VFGG +  S LIAA P+Q+
Sbjct: 206 GSNRKNGMLSVSLAKPDGRVFGGGVAGS-LIAAGPIQL 241

[Close]

BLAST of CSPI06G12190 vs. TrEMBL
Match: B9SN72_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1186140 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-15
Identity = 65/192 (33.85%), Postives = 106/192 (55.21%), Query Frame = 1


Query: 36  SAEKQISMKKRKGRPRKFN-------------DAVDRRDPQSTPDSQTKPERRRGPRPGL 95
           S   +I++K+++GRPRKF+             + +    P S+   ++  +R RG   G 
Sbjct: 52  SRRAEITVKRKRGRPRKFDHHHHHHHIQMDHENTMSNVSPSSSNFLRSCEKRGRGRPRGS 111

Query: 96  SISQVLATLGTYASDYS--CFFPSLAPSSAVTNIVDRISNFKVPGRRSICIISAYGSVSS 155
              Q+LA LG +A++ +     P +   +   +IV +IS+F   G R++C++SA G VS 
Sbjct: 112 GRLQLLAALGGFAAETAGGILIPHVITVNTGEDIVSKISSFAQRGPRAVCVLSATGVVSC 171

Query: 156 VIIHKPNTVASILRFEGMFEILQLSGWFDGRDNKKQ------MTISFSTSNGQVFGGIIV 207
           VII +P +   +LR EG FEIL LSG F  R+          ++++ +  +GQVFGG +V
Sbjct: 172 VIIRQPGSSGGLLRCEGHFEILSLSGSFTFRETSTARRKIGVLSVTLAKPDGQVFGGGVV 231

[Close]

BLAST of CSPI06G12190 vs. TrEMBL
Match: B9HQK9_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0009s15210g PE=4 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-15
Identity = 79/222 (35.59%), Postives = 117/222 (52.70%), Query Frame = 1


Query: 5   PPGNFMVRHESS-------DSDNIGDGEIDEEFRHGELSAEKQISMKKRKGRPRKFNDAV 64
           PPGN +V    +       + +N+G G        G  S  +  ++K+++GRPRK++   
Sbjct: 27  PPGNQVVHKVGTSGSDHTLEPNNLGGGGTGCSGGSGSESVVEN-TLKRKRGRPRKYDAGA 86

Query: 65  D--RRDPQSTP----DSQTKPERRRGPRP-GLSISQVLATLGTYASDYSCFFPSLAPSSA 124
           +     P S P     S +  E+R   RP G    Q+LA+L   A     F P + P   
Sbjct: 87  NLVSSPPLSPPPGLSSSLSSCEKRVRGRPRGSGKLQLLASLAETAG--GSFTPHVVPVHT 146

Query: 125 VTNIVDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGMFEILQLSGWF-- 184
             +IV ++  F   G R++CI+SA G VSSVI+ +P +   ILR++G FEIL LSG F  
Sbjct: 147 GEDIVTKLLVFSQKGARAVCILSATGVVSSVIMRQPGSSGGILRYDGPFEILSLSGSFTF 206

Query: 185 --DGRDNKK--QMTISFSTSNGQVFGGIIVRSRLIAATPVQV 207
              G  N+K   ++IS +  NG+VFGG +  S LIAA P+Q+
Sbjct: 207 SKTGGSNRKNGMLSISLAKPNGRVFGGGVAGS-LIAAGPIQL 244

[Close]

BLAST of CSPI06G12190 vs. TAIR10
Match: AT4G00200.1 (AT4G00200.1 AT hook motif DNA-binding family protein)

HSP 1 Score: 79.3 bits (194), Expect = 3.0e-15
Identity = 63/186 (33.87%), Postives = 94/186 (50.54%), Query Frame = 1


Query: 40  QISMKKRKGRPRKFNDAVDRRDPQSTPDSQTKPERRRGPRPGLSISQVLATLGTYASDY- 99
           + S KKR+GRPRK+          S P      +R RG   G  + ++  T+G ++S   
Sbjct: 52  EASGKKRRGRPRKYEANGAPLPSSSVP---LVKKRVRGKLNGFDMKKMHKTIGFHSSGER 111

Query: 100 ------------SCFFPSLAPSSAVTNIVDRISNFKVPGRRSICIISAYGSVSSVIIHKP 159
                       S F P +   +   +I  RI +F   G R+ICI+SA G +S+V + +P
Sbjct: 112 FGVGGGVGGGVGSNFTPHVITVNTGEDITMRIISFSQQGPRAICILSANGVISNVTLRQP 171

Query: 160 NTVASILRFEGMFEILQLSGWFDGRDNKKQ------MTISFSTSNGQVFGGIIVRSRLIA 207
           ++    L +EG FEIL LSG F   +N+        M++S +  +G+V GG  V   LIA
Sbjct: 172 DSCGGTLTYEGRFEILSLSGSFMETENQGSKGRSGGMSVSLAGPDGRVVGG-GVAGLLIA 231

[Close]

BLAST of CSPI06G12190 vs. TAIR10
Match: AT2G45850.1 (AT2G45850.1 AT hook motif DNA-binding family protein)

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-14
Identity = 60/179 (33.52%), Postives = 97/179 (54.19%), Query Frame = 1


Query: 43  MKKRKGRPRKFND------AVDRRDPQS-TPDSQTKPERRRGPRPGLSISQVLATLGTY- 102
           MK+++GRPRK+        A+      + TP++  K  R RG  PG    Q +A++G   
Sbjct: 97  MKRKRGRPRKYGQDGSVSLALSSSSVSTITPNNSNK--RGRGRPPGSGKKQRMASVGELM 156

Query: 103 -ASDYSCFFPSLAPSSAVTNIVDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASIL 162
            +S    F P +   S   +I  ++  F   G R+IC++SA G+VS+  + +P+     +
Sbjct: 157 PSSSGMSFTPHVIAVSIGEDIASKVIAFSQQGPRAICVLSASGAVSTATLIQPSASPGAI 216

Query: 163 RFEGMFEILQLSGWF----DG--RDNKKQMTISFSTSNGQVFGGIIVRSRLIAATPVQV 207
           ++EG FEIL LS  +    DG  R+    +++S ++ +G+V GG I    LIAA+PVQV
Sbjct: 217 KYEGRFEILALSTSYIVATDGSFRNRTGNLSVSLASPDGRVIGGAI-GGPLIAASPVQV 272

[Close]

BLAST of CSPI06G12190 vs. TAIR10
Match: AT1G63470.1 (AT1G63470.1 AT hook motif DNA-binding family protein)

HSP 1 Score: 74.7 bits (182), Expect = 7.4e-14
Identity = 61/189 (32.28%), Postives = 92/189 (48.68%), Query Frame = 1


Query: 39  KQISMKKRKGRPRKF------------NDAVDRRDPQSTPDSQTK-PERRRGPRPGLSIS 98
           +Q  +KK++GRPRK+               V ++   S+  S    P+R RG  PG    
Sbjct: 100 EQPMVKKKRGRPRKYVPDGQVSLGLSPMPCVSKKSKDSSSMSDPNAPKRARGRPPGTGRK 159

Query: 99  QVLATLGTYASDYS--CFFPSLAPSSAVTNIVDRISNFKVPGRRSICIISAYGSVSSVII 158
           Q LA LG + +  +   F P +    +  +IV ++ +F     R++CI+S  G+VSSV +
Sbjct: 160 QRLANLGEWMNTSAGLAFAPHVISVGSGEDIVSKVLSFSQKRPRALCIMSGTGTVSSVTL 219

Query: 159 HKPNTVASILRFEGMFEILQLSGWF------DGRDNKKQMTISFSTSNGQVFGGIIVRSR 207
            +P +    L FEG FEIL L G +        +     +++S S   G V GG I    
Sbjct: 220 REPASTTPSLTFEGRFEILSLGGSYLVNEEGGSKSRTGGLSVSLSGPEGHVIGGGI--GM 279

[Close]

BLAST of CSPI06G12190 vs. TAIR10
Match: AT1G63480.1 (AT1G63480.1 AT hook motif DNA-binding family protein)

HSP 1 Score: 74.3 bits (181), Expect = 9.7e-14
Identity = 55/174 (31.61%), Postives = 89/174 (51.15%), Query Frame = 1


Query: 43  MKKRKGRPRKFNDA-VDRRDPQSTPDSQ-TKPERRRGPRPGLSISQVLATLGTYASDYS- 102
           +K+++GRPRK+ +  V  +   S+P S   +P+R RG  PG    Q LA LG + +  + 
Sbjct: 98  VKRKRGRPRKYGEPMVSNKSRDSSPMSDPNEPKRARGRPPGTGRKQRLANLGEWMNTSAG 157

Query: 103 -CFFPSLAPSSAVTNIVDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGM 162
             F P +    A  +I  ++ +F     R++CI+S  G++SSV + KP +    L +EG 
Sbjct: 158 LAFAPHVISIGAGEDIAAKVLSFSQQRPRALCIMSGTGTISSVTLCKPGSTDRHLTYEGP 217

Query: 163 FEILQLSGWF------DGRDNKKQMTISFSTSNGQVFGGIIVRSRLIAATPVQV 207
           FEI+   G +        R     +++S S  +G +  G +    LIAA  VQV
Sbjct: 218 FEIISFGGSYLVNEEGGSRSRTGGLSVSLSRPDGSIIAGGV--DMLIAANLVQV 269

[Close]

BLAST of CSPI06G12190 vs. TAIR10
Match: AT4G22770.1 (AT4G22770.1 AT hook motif DNA-binding family protein)

HSP 1 Score: 72.0 bits (175), Expect = 4.8e-13
Identity = 60/191 (31.41%), Postives = 95/191 (49.74%), Query Frame = 1


Query: 43  MKKRKGRPRKFN----------DAVDRRDPQSTP--DSQTKPERRRGPRPG-------LS 102
           +KKR+GRPRK+           + +    P ++   D  T  E+R   +P        + 
Sbjct: 71  IKKRRGRPRKYGHDGAAVTLSPNPISSAAPTTSHVIDFSTTSEKRGKMKPATPTPSSFIR 130

Query: 103 ISQVLATLGTYASDYSC--FFPSLAPSSAVTNIVDRISNFKVPGRRSICIISAYGSVSSV 162
               +  LG ++   +   F P +   +A  ++  RI +F   G  +IC++ A G VSSV
Sbjct: 131 PKYQVENLGEWSPSSAAANFTPHIITVNAGEDVTKRIISFSQQGSLAICVLCANGVVSSV 190

Query: 163 IIHKPNTVASILRFEGMFEILQLSGWF-----DG-RDNKKQMTISFSTSNGQVFGGIIVR 207
            + +P++    L +EG FEIL LSG F     DG R     M++S ++ +G+V GG  V 
Sbjct: 191 TLRQPDSSGGTLTYEGRFEILSLSGTFMPSDSDGTRSRTGGMSVSLASPDGRVVGG-GVA 250

[Close]

BLAST of CSPI06G12190 vs. NCBI nr
Match: gi|700191708|gb|KGN46912.1| (hypothetical protein Csa_6G150510 [Cucumis sativus])

HSP 1 Score: 222.2 bits (565), Expect = 8.2e-55
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1


Query: 1   MELRPPGNFMVRHESSDSDNIGDGEIDEEFRHGELSAEKQISMKKRKGRPRKFNDAVDRR 60
           MELRPPGNFMVRHESSDSDNIGDGEIDEEFRHGELSAEKQISMKKRKGRPRKFNDAVDRR
Sbjct: 1   MELRPPGNFMVRHESSDSDNIGDGEIDEEFRHGELSAEKQISMKKRKGRPRKFNDAVDRR 60

Query: 61  DPQSTPDSQTKPERRRGPRPGLSISQVLATLGTYASDYSCFFPSLAPSSAVT 113
           DPQSTPDSQTKPERRRGPRPGLSISQVLATLGTYASDYSCFFPSLAPSSAVT
Sbjct: 61  DPQSTPDSQTKPERRRGPRPGLSISQVLATLGTYASDYSCFFPSLAPSSAVT 112

[Close]

BLAST of CSPI06G12190 vs. NCBI nr
Match: gi|659117499|ref|XP_008458633.1| (PREDICTED: putative DNA-binding protein ESCAROLA isoform X1 [Cucumis melo])

HSP 1 Score: 209.9 bits (533), Expect = 4.2e-51
Identity = 126/208 (60.58%), Postives = 146/208 (70.19%), Query Frame = 1


Query: 1   MELRPPGNFMVRHESSDSDNIGDGEIDEEFRHGELSAEKQISMKKRKGRPRKFNDAVDRR 60
           MELR   N     ESSDSD+IGD EIDEE RH E     +I +KKR+GRPRK NDAV+R 
Sbjct: 1   MELRDNRNIRAIRESSDSDSIGDDEIDEEHRHCEPRGGMKIPIKKRRGRPRKDNDAVNRP 60

Query: 61  DPQSTPDSQTKPERRRGPRPGLSISQVLATLGTYA--SDYSCFFPSLAPSSAVTNIVDRI 120
            P ST DSQTKPERR G  PG   SQVLATLG YA  +  + F P +       NIVDRI
Sbjct: 61  HPPSTADSQTKPERRGGRPPGSGTSQVLATLGGYAWNTIAAQFTPHVIIVQPGENIVDRI 120

Query: 121 SNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGMFEILQLSGWFDGRDNKKQMT 180
           S F+VP  RSICIISA  S+SSV+I K NT+A   +FEGMFEIL+L GWFD R  +K +T
Sbjct: 121 SCFRVP-CRSICIISACSSISSVVILKRNTIARTFKFEGMFEILRLFGWFDDRGREKIIT 180

Query: 181 ISFSTSNGQVFGGIIVRSRLIAATPVQV 207
           I+FS  NGQVFGG++V S LIAATPVQ+
Sbjct: 181 ITFSKPNGQVFGGVVV-SLLIAATPVQI 206

[Close]

BLAST of CSPI06G12190 vs. NCBI nr
Match: gi|659117495|ref|XP_008458631.1| (PREDICTED: uncharacterized protein LOC103497978 isoform X1 [Cucumis melo])

HSP 1 Score: 193.0 bits (489), Expect = 5.3e-46
Identity = 122/217 (56.22%), Postives = 147/217 (67.74%), Query Frame = 1


Query: 1   MELRPPGNFMVRHESSDSDNIGDGE--------IDEEFRHGELSAEKQISMKKRKGRPRK 60
           ME +   NF V+HES DSDN+ DGE        IDEE R GE +  K ++MKK KGRPRK
Sbjct: 1   MEPQNRRNFTVKHESPDSDNVADGEQRSIGDEAIDEEDRLGESAGGKTVTMKKIKGRPRK 60

Query: 61  FNDAVDRRDPQSTPDSQTKPERRRGPRPGLSISQVLATLGTYASDY--SCFFPSLAPSSA 120
            NDAV+ ++P S+ DSQT P+   G  PG    QVLA+LG YA +     F P L   + 
Sbjct: 61  -NDAVNGQNPSSSADSQTIPKPPLGHPPGFGKLQVLASLGGYAWETFGGDFTPHLILVAP 120

Query: 121 VTNIVDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGMFEILQLSGWFDG 180
             NIV+RIS F +P  R++CIISA GSVSSVII+ PN+VAS L+FEGMFEILQLSGW   
Sbjct: 121 KENIVNRISKFSIPQSRTVCIISAIGSVSSVIIYDPNSVASTLKFEGMFEILQLSGWSYE 180

Query: 181 RDNKKQMTISFSTSNG-QVFGGIIVRSRLIAATPVQV 207
            D  K MTISFS S+G QVFGG +V S +IAATPVQ+
Sbjct: 181 GDGIKSMTISFSKSDGNQVFGG-VVASSIIAATPVQI 215

[Close]

BLAST of CSPI06G12190 vs. NCBI nr
Match: gi|778722142|ref|XP_011658414.1| (PREDICTED: uncharacterized protein LOC105435994 [Cucumis sativus])

HSP 1 Score: 186.4 bits (472), Expect = 5.0e-44
Identity = 94/95 (98.95%), Postives = 94/95 (98.95%), Query Frame = 1


Query: 1  MELRPPGNFMVRHESSDSDNIGDGEIDEEFRHGELSAEKQISMKKRKGRPRKFNDAVDRR 60
          MELRPPGNFMVRHESSDSDNIGDGEIDEEFRHGELSAEKQISMKKRKGRPRKFNDAVDRR
Sbjct: 1  MELRPPGNFMVRHESSDSDNIGDGEIDEEFRHGELSAEKQISMKKRKGRPRKFNDAVDRR 60

Query: 61 DPQSTPDSQTKPERRRGPRPGLSISQVLATLGTYA 96
          DPQSTPDSQTKPERRRGPRPGLSISQVLATLG YA
Sbjct: 61 DPQSTPDSQTKPERRRGPRPGLSISQVLATLGCYA 95

[Close]

BLAST of CSPI06G12190 vs. NCBI nr
Match: gi|700191709|gb|KGN46913.1| (hypothetical protein Csa_6G150520 [Cucumis sativus])

HSP 1 Score: 173.3 bits (438), Expect = 4.3e-40
Identity = 117/219 (53.42%), Postives = 141/219 (64.38%), Query Frame = 1


Query: 1   MELRPPGNFMVRHESSDSDNIGDGE--------IDEEFRHGELSAEKQISMKKRKGRPRK 60
           ME +   NF V+HES+DS N+ DGE        ID+E R GE +  +  +MKKRK R  K
Sbjct: 1   MEPQDRINFTVKHESTDSYNMEDGEQSSIGDRVIDKEDRLGESTGGRTTTMKKRKERSTK 60

Query: 61  FNDAVDRRDPQSTPDSQTKPERRR-GPRPGLSISQVLATLGTYASDYSC--FFPSLAPSS 120
            ND +D ++P S+ DSQT P R   G  PG    QVLA+LG YA D     F P +   +
Sbjct: 61  -NDTIDGKNPSSSADSQTIPNRPPLGHPPGFGKLQVLASLGGYAWDTFSRDFTPHIILVA 120

Query: 121 AVTNIVDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGMFEILQLSGWFD 180
              NIV+RISNF VP  R++CIISA G VSS+IIH PN+VAS L+FEG FEILQLSGW  
Sbjct: 121 PGENIVNRISNFSVPRSRTVCIISAVGLVSSIIIHDPNSVASTLKFEGTFEILQLSGWSH 180

Query: 181 GRDNKKQMTISFSTSNG--QVFGGIIVRSRLIAATPVQV 207
             D+ + MTISFS  +G  QVFGG  V S LIAATPVQV
Sbjct: 181 EGDDIRLMTISFSKLDGRNQVFGG-AVASSLIAATPVQV 217

The following BLAST results are available for this feature:

BLAST of CSPI06G12190 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AHL7_ARATH	5.3e-14	33.87	AT-hook motif nuclear-localized protein 7 OS=Arabidopsis thaliana GN=AHL7 PE=2 S...	[more]
AHL9_ARATH	2.7e-13	33.52	AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana GN=AHL9 PE=2 S...	[more]
AHL5_ARATH	1.3e-12	32.28	AT-hook motif nuclear-localized protein 5 OS=Arabidopsis thaliana GN=AHL5 PE=1 S...	[more]
AHL12_ARATH	1.7e-12	31.61	AT-hook motif nuclear-localized protein 12 OS=Arabidopsis thaliana GN=AHL12 PE=1...	[more]
AHL2_ARATH	8.5e-12	31.41	AT-hook motif nuclear-localized protein 2 OS=Arabidopsis thaliana GN=AHL2 PE=2 S...	[more]

BLAST of CSPI06G12190 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KES5_CUCSA	5.7e-55	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G150510 PE=4 SV=1	[more]
A0A0A0KBM8_CUCSA	3.0e-40	53.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G150520 PE=4 SV=1	[more]
U5GMD3_POPTR	6.8e-16	34.86	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s20060g PE=4 SV=1	[more]
B9SN72_RICCO	1.2e-15	33.85	DNA binding protein, putative OS=Ricinus communis GN=RCOM_1186140 PE=4 SV=1	[more]
B9HQK9_POPTR	1.5e-15	35.59	Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0009s15210g P...	[more]

BLAST of CSPI06G12190 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00200.1	3.0e-15	33.87	AT hook motif DNA-binding family protein	[more]
AT2G45850.1	1.5e-14	33.52	AT hook motif DNA-binding family protein	[more]
AT1G63470.1	7.4e-14	32.28	AT hook motif DNA-binding family protein	[more]
AT1G63480.1	9.7e-14	31.61	AT hook motif DNA-binding family protein	[more]
AT4G22770.1	4.8e-13	31.41	AT hook motif DNA-binding family protein	[more]

BLAST of CSPI06G12190 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700191708\|gb\|KGN46912.1\|	8.2e-55	100.00	hypothetical protein Csa_6G150510 [Cucumis sativus]	[more]
gi\|659117499\|ref\|XP_008458633.1\|	4.2e-51	60.58	PREDICTED: putative DNA-binding protein ESCAROLA isoform X1 [Cucumis melo]	[more]
gi\|659117495\|ref\|XP_008458631.1\|	5.3e-46	56.22	PREDICTED: uncharacterized protein LOC103497978 isoform X1 [Cucumis melo]	[more]
gi\|778722142\|ref\|XP_011658414.1\|	5.0e-44	98.95	PREDICTED: uncharacterized protein LOC105435994 [Cucumis sativus]	[more]
gi\|700191709\|gb\|KGN46913.1\|	4.3e-40	53.42	hypothetical protein Csa_6G150520 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005175	PPC_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G12190.1	CSPI06G12190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005175	PPC domain	PFAM	PF03479	DUF296	coord: 113..206 score: 7.8
IPR005175	PPC domain	PROFILE	PS51742	PPC	coord: 95..206 score: 20
None	No IPR available	GENE3D	G3DSA:3.30.1330.80		coord: 113..206 score: 7.7
None	No IPR available	PANTHER	PTHR31500	FAMILY NOT NAMED	coord: 43..206 score: 1.8
None	No IPR available	PANTHER	PTHR31500:SF14	SUBFAMILY NOT NAMED	coord: 43..206 score: 1.8
None	No IPR available	unknown	SSF117856	AF0104/ALDC/Ptd012-like	coord: 114..206 score: 9.42

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G12190	Cla008678	Watermelon (97103) v1	cpiwmB529
CSPI06G12190	Csa6G150510	Cucumber (Chinese Long) v2	cpicuB314
CSPI06G12190	MELO3C021459	Melon (DHL92) v3.5.1	cpimeB417
CSPI06G12190	ClCG02G021850	Watermelon (Charleston Gray)	cpiwcgB457
CSPI06G12190	MELO3C021460.2	Melon (DHL92) v3.6.1	cpimedB412
CSPI06G12190	CsaV3_6G014640	Cucumber (Chinese Long) v3	cpicucB364
CSPI06G12190	Cla97C02G047910	Watermelon (97103) v2	cpiwmbB450
CSPI06G12190	Bhi10G000069	Wax gourd	cpiwgoB611
CSPI06G12190	Cucsa.385430	Cucumber (Gy14) v1	cgycpiB570
CSPI06G12190	CmaCh02G013570	Cucurbita maxima (Rimu)	cmacpiB636
CSPI06G12190	CmoCh02G013940	Cucurbita moschata (Rifu)	cmocpiB628
CSPI06G12190	CsGy6G012260	Cucumber (Gy14) v2	cgybcpiB288
CSPI06G12190	Carg02607	Silver-seed gourd	carcpiB0964

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G12190	Bottle gourd (USVL1VR-Ls)	cpilsiB415
CSPI06G12190	Bottle gourd (USVL1VR-Ls)	cpilsiB441
CSPI06G12190	Bottle gourd (USVL1VR-Ls)	cpilsiB453
CSPI06G12190	Melon (DHL92) v3.6.1	cpimedB475
CSPI06G12190	Melon (DHL92) v3.6.1	cpimedB499
CSPI06G12190	Cucumber (Gy14) v2	cgybcpiB142
CSPI06G12190	Cucumber (Gy14) v2	cgybcpiB289
CSPI06G12190	Silver-seed gourd	carcpiB0188
CSPI06G12190	Silver-seed gourd	carcpiB0283
CSPI06G12190	Silver-seed gourd	carcpiB0374
CSPI06G12190	Cucumber (Chinese Long) v3	cpicucB366
CSPI06G12190	Watermelon (97103) v2	cpiwmbB443
CSPI06G12190	Watermelon (97103) v2	cpiwmbB480
CSPI06G12190	Wax gourd	cpiwgoB639
CSPI06G12190	Wild cucumber (PI 183967)	cpicpiB186
CSPI06G12190	Cucurbita maxima (Rimu)	cmacpiB272
CSPI06G12190	Cucurbita maxima (Rimu)	cmacpiB560
CSPI06G12190	Cucurbita maxima (Rimu)	cmacpiB860
CSPI06G12190	Cucurbita maxima (Rimu)	cmacpiB895
CSPI06G12190	Cucurbita moschata (Rifu)	cmocpiB549
CSPI06G12190	Cucurbita moschata (Rifu)	cmocpiB840
CSPI06G12190	Cucurbita moschata (Rifu)	cmocpiB875
CSPI06G12190	Cucumber (Chinese Long) v2	cpicuB316
CSPI06G12190	Melon (DHL92) v3.5.1	cpimeB486
CSPI06G12190	Melon (DHL92) v3.5.1	cpimeB515
CSPI06G12190	Watermelon (Charleston Gray)	cpiwcgB445
CSPI06G12190	Watermelon (Charleston Gray)	cpiwcgB489
CSPI06G12190	Watermelon (97103) v1	cpiwmB468
CSPI06G12190	Watermelon (97103) v1	cpiwmB525
CSPI06G12190	Cucurbita pepo (Zucchini)	cpecpiB293
CSPI06G12190	Cucurbita pepo (Zucchini)	cpecpiB756