CSPI06G11120 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G11120
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionSAM-dependent methyltransferase
LocationChr6 : 9722288 .. 9727293 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTATCTTTGAAATTTGGGTCAAAATGGGTGGCGGTTGCTACCTCCGAATCAGTCGTAGGACGTCAAAGACACTTGAGAAATCTTTGCTGTTTTTCCAACCGTATTCAGTCAAATGGATTATCTTCTCAATATCAGATTGATTTCAATTCACCATTGTCGTCGAAACATTCTTTGCCTTTGGAAGGTTACATTTCAACTCTGTTGTATTTATATTCGCAAAATTTTGATGTTAGATAGAGTCCTATTTACCATCGTAATATTAACTTTGTATTTGGGGGGTATTAAATTTGATTCTTGGGATGGTTATTGAGGTATGCTAGTTTGATAGGGGGTTTAGTGAGAAGATTGTTGATAATGTTCTTTTTTTTTTAAATAAAAAATTTATCATTCGAGTTTGATTGAAATTTGATATGTTCTTGTGAAACTGTGGATGATGTGATTTAGGACTGGAGGATGTCATGGTCGGCTACTTTTTTGGGAAGAAGAGGGCGACAGAAGTTGCTCACTCGTATGTGTTTGTATTATCCTTTATCAGCTGACTTTTTTGAGCATTTTTAAGTAGGTTGTATGTTCTTTGCTTTAAGTATTTTGTTCTTCACTGGCCTCTCTTTCTGAATCCAACGGTCTCTATTGGGTTGTATGGGCAGTAGTTTCAAAGCTATGCCCTGTTTTTCTAAACTCGTAAGTGCATTATGGCTTTTGGAAATCTATTCCACAGAAGATTTTGCATGATGGGTAGTTTACTGGTTTATTGTAGCTTTTCAAGCCTTTGCTCAAAATTATACTTCAATCAATATGAGTTGAGAATCACAGGCAGTATGGGCTTGAGAGTATACCATAGTTGGAATATGGAGTTGGAATTTAACTCTTATTTCTTTTTTGTTGAAAGGAACACTTTCATTGAGAAAAAAATGAAAGAATTCAAGGCATTCAGAAAAACCAGCCCACAGAGAAAGAGGAACACCCTTGTAAAGAAAGGGACTTCAACTATGTAAAATAGCACCTATAGAATAATTACAAAAGCCTACAAAGAAACATGATACCAGACAAGGGACCAAATCTTGCTAGGGCCCCTCTTCACACCTCTAAAAACCCTATTGTTCCACTCACCACACACCATCCATAAGATACCATGCACCCCTGCAAATCAAAAAGAATTTAACCCATCTTACTCATTAGTTTTCTTGTGGAGAAAGTATTCATCAAGACTCTTGAGAGTGGGTTTTCTTTTTTGCGGACTTCGCTTATTCCATCTTTTAGCTTGTGTTCTCACAAGATACAACACATATTCAAAATACATAGGACTTTTTCCATGGTTTAGAATTTAGAATGTAACATTTTTTATTTCTTGCTTTTTAGTTGTTGATCCTTCTGGTTTTGTGATGAGAAGTATTAAAAGTTAATTTTCATGGCTAGCTATTAATTACTTTTTCTTTGTTCATCAGTGTTTGGAAATGTGTTGTCAAAAAAGGGGATACAGTAGTAGATGCTACTTGTGGAAATGGTTATGATACTCTAGCTATGGTCAAGATGGTTGCAGATGAATCTGGTTCTGCACGTGTTTATGCAATGGATGTACAAAATGAGGCTTTAGAAAGTACTTCTGCATTGCTGGACGAATCACTCAGTGAAAAAGAGGTATCCTTTGGTCTATCACATTTTAGATGAATCCATGATTTTCTTCCATTACATAACAGCATATACAGCCTATAACTTGTTCCAACTAATGGCCTACAGCCCAAAATGGTAGATATGATGGTTTTCGATAGTCTAAAGTTTATTTAGCATGGTAATGTATGCTGATTTCATGTGATCTAACTATTTGTGACTTTGAGCTGCTCTTCAGGTTTATTTCTGTCAATTCACTTTCAAAAAATGAGATGAACTGATGACTTTACCTTCTGATTTGTCTAGTTTGTCTTTAGAAATGTTTGTTGAAGTGCTTATAGTTTCTAGTTTTATGTAGAAGAAACTTGTTAAACTCTCTTCCATTTGCCACAGCAGAATGGAGGATGTCATTCTAGAGGATTCCCCTGTTAGGTAATAGTTCCACATTTTCTGCTTAGTAATGCAAAAAGAATTATATATGAAGCCAGATTTGTTTTTGTAATTGACACCTATCCTTTCTTGCAAATTTTTTTTGGCTATTAGTGTGAATCTTGAACAATCATTCGAGAAATGTGAGAAAGAAAAAGAAAGAATTCAAATAAACTATCTGTGATTAGATATACCAGTTAAGTTAATGCTCATCTATTTTTAGTCTTGTTGCATTTAACCTAGGGTACCTACCTGGTGGTAACAAAGCAATCACTACAAAGTCAGAAACAACATTTCAAGCACTTAAAGCTGCACACAGGATTCTGAAACCTGGAGGGCTTATCAGCCTAGTGGTTTATGTGGGGCATCCTGGTGGAATGTAATACTTCTGATCCTTCTCTTTTTCTTCCCACTGCTTTCCATGCTTATTTCTCTATCCTAAAGGTAGCAATTTTGGAATTTAAACTTTTATCTATTTATCTTTGTTCTGGTGGACAAATCCTTGAATGCTTCAATCAGTGCAAATTTCATCTTTTTCTTTCATCAGCAGAAAATTATTTCAGAAGTTGATGGAATGGGTTACTAGGGCTAAATGCTCACTTTAATTCCATTTCAATGGGAGGACAAAGGTAGTAATTTTTTAGGTACTTAGCACCTTAGAGAACTACACCCCAAAAGCCAGCATTAGGGTGGGAGAGCCAAGCTACTTAAGTATCACATTGGTCATCACATTCTAACCAACGTGGGACGAACGCATCCCACTCTACCTTGGTTTCTAACAACATTTGTAAAGACTCATCCTCGAACTAATAGATTGATAATAACAGAAACAACTACAACAGCCACCTTTTGATAGGGTGGTACTCTTCCAAGTTTGGATATTCTCCACAACTTAACAAAGCACAAGCATATCCCCTTCACTCACTCACTCTACTATTTATAACAAGATCCACTAACTACACCCTATTTAGTGATCATATATCCCTTATCTAAGATAATTACCATTATACCCTCTTGCCTAATATCATACTTATCTAGGTACGTTGCATAATTCAATCTCTGAACTTGATATGGCTCTAGTTTCTTTAAAATAAATTGTGAAGGATCACTTCTTGGAGTTATAACACACTGGTATGGACATTGGAGGAATGGTTGCAACGAATTATGTAACGTTTGTCATTTAAGAGTTTATGGTCTGTGGCTGGTGTGGGTTGGATAGTCTAATGTGAGCTGTTATTCTGCAACACTGACTTGATTTTAGTTGTTGACCTACATTCTAGTTTGATATGTAACGGTTTTATTTTCTAATGCTTAGGGAAGAATTGGAGACTATCGAAAAATTTTCTAGCGACCTGGCTGTTGAGAATTGGATTTGTTGTAAGCTACAGATGTTAAACCGGCCACTAGCTCCAGTGCCTGTATTCTTATTCAAGAGATGAAAGTGGTAAGCATTTTTTATTCTTCCATCTGATTCCCAACAACTCCTAGCTTCTCTAAAAAAGTGTTGGTTATTATCATTTATTTAGTAGAAAATGAAGAACTATTAGCAATAGCATAACCAAATTAGATTTGGCTCCATGTAGTATGGAGGCCTAAATATTACCTTGTCATGTGACCAAGTTTCTCACCTTGTCATGTCTCAAACTTAGACCAAGTCAAAACCTATGATGTCATTCAGTAACCATTGTTTTATGTTTTGAAAATTAAGTCTACAAACAGCCCCTTCCACCTTGAAATTTCTTTGCTTATCAATTTTTTATCCATCTTTATAAAAACCAAGCCAAATTTTGAAAACTAAAATATTAAAAAGCTGCTTTTTATTTTTGGAATTTGGCTAAGAATGGAAATATTGTACTTAAGAAATAGGCAAACCATCATAAGAAAATGGTAGAAAGTAGGCTTAATTTTCAAAAACCAAAATAAAAAAACGAAATAATTACCAAATGGGGCTTTATGGTGTGTGGATTTGGATTTAGTGGCATCAAGAAATTATGGCTACATATGACACAGTAATTTCTGTAGTCTAACCATCTCTATGAGTCACAAAGTAGGTTTGTGCAGCTACAAATCACTATTCAATAAGTTGGTGTTTCATGATCCTTGTCTCATCCTTGAGTCTATAATTTGAAGCCTCATAGCATGTATTGTAGGAGTCAGAACAAAACTAAACCAAAACGAGTCAAAATTGTGTTTGTGACTTCGACATAGGATGTATTGTTCGTTTCTTACCTTGAATCGTAAAGAACGAAGCAAGTCGGATCAATCCGATTCAGAAAAAACCAATTGAGTCATAGGTAGTACTCGATACTCTTCATGCAGTCCTCTATTAACTTTTCTTATTCATTTGCCACTCAAGCACTTGGTTCAAGCATTGAAGTAACTTAGATAATCATCATACCATTACCAGTACCAGTTCAAGTTTAGAGAGAGAAAGAGCTTTTTTTCTTGAAGCCACTGTTGAAAATGACTTGGGTTTTGTTTATTAATGAATTATAGGAAGGATTTTTATTAAATACTAGTTTTGACAACTGTTCTGTTGCAATTGAGGCAAACCATTGATCAACTAACGAAAACATGCTTTGAAGAGCCTTCTGGAAATCGAGTTCATATCAGCATTAAATTTGTTGTTTAATTTGAACAATGCAAATTTTATTGATTAATGTTGTGGATATTATAGCTTGTAATGATACTTCTGCATTTGATATTTTGTTCAGACAGTTTATGAAGTTGGGACAATGCTCATGCATAGTTCACTTGCTATTGCCTCTTTTGGTAGCCTTGGTGGCATTGGATTAATTTCATATCAATCTTGTCATGCAGCTTCATTACCACAAGTAAGTCACAGTAAAGTTATAATTTATTATAGCTCAATGTTACTTGACATGTATTTATTTTATCGAAGTCGGGGGTTCAAATATCTAACGTGTCACTTGTACTGAAAAAATGGAGTACTATCAATTTCGTGC

mRNA sequence

ATGTTATCTTTGAAATTTGGGTCAAAATGGGTGGCGGTTGCTACCTCCGAATCAGTCGTAGGACGTCAAAGACACTTGAGAAATCTTTGCTGTTTTTCCAACCGTATTCAGTCAAATGGATTATCTTCTCAATATCAGATTGATTTCAATTCACCATTGTCGTCGAAACATTCTTTGCCTTTGGAAGGACTGGAGGATGTCATGGTCGGCTACTTTTTTGGGAAGAAGAGGGCGACAGAAGTTGCTCACTCTGTTTGGAAATGTGTTGTCAAAAAAGGGGATACAGTAGTAGATGCTACTTGTGGAAATGGTTATGATACTCTAGCTATGGTCAAGATGGTTGCAGATGAATCTGGTTCTGCACGTGTTTATGCAATGGATGTACAAAATGAGGCTTTAGAAAGTACTTCTGCATTGCTGGACGAATCACTCAGTGAAAAAGAGAAGAAACTTGTTAAACTCTCTTCCATTTGCCACAGCAGAATGGAGGATGTCATTCTAGAGGATTCCCCTGTTAGTCTTGTTGCATTTAACCTAGGGTACCTACCTGGTGGTAACAAAGCAATCACTACAAAGTCAGAAACAACATTTCAAGCACTTAAAGCTGCACACAGGATTCTGAAACCTGGAGGGCTTATCAGCCTAGTGGTTTATGTGGGGCATCCTGGTGGAATGGAAGAATTGGAGACTATCGAAAAATTTTCTAGCGACCTGGCTGTTGAGAATTGGATTTGTTGTAAGCTACAGATGTTAAACCGGCCACTAGCTCCAGTGCCTGTATTCTTATTCAAGAGATGA

Coding sequence (CDS)

ATGTTATCTTTGAAATTTGGGTCAAAATGGGTGGCGGTTGCTACCTCCGAATCAGTCGTAGGACGTCAAAGACACTTGAGAAATCTTTGCTGTTTTTCCAACCGTATTCAGTCAAATGGATTATCTTCTCAATATCAGATTGATTTCAATTCACCATTGTCGTCGAAACATTCTTTGCCTTTGGAAGGACTGGAGGATGTCATGGTCGGCTACTTTTTTGGGAAGAAGAGGGCGACAGAAGTTGCTCACTCTGTTTGGAAATGTGTTGTCAAAAAAGGGGATACAGTAGTAGATGCTACTTGTGGAAATGGTTATGATACTCTAGCTATGGTCAAGATGGTTGCAGATGAATCTGGTTCTGCACGTGTTTATGCAATGGATGTACAAAATGAGGCTTTAGAAAGTACTTCTGCATTGCTGGACGAATCACTCAGTGAAAAAGAGAAGAAACTTGTTAAACTCTCTTCCATTTGCCACAGCAGAATGGAGGATGTCATTCTAGAGGATTCCCCTGTTAGTCTTGTTGCATTTAACCTAGGGTACCTACCTGGTGGTAACAAAGCAATCACTACAAAGTCAGAAACAACATTTCAAGCACTTAAAGCTGCACACAGGATTCTGAAACCTGGAGGGCTTATCAGCCTAGTGGTTTATGTGGGGCATCCTGGTGGAATGGAAGAATTGGAGACTATCGAAAAATTTTCTAGCGACCTGGCTGTTGAGAATTGGATTTGTTGTAAGCTACAGATGTTAAACCGGCCACTAGCTCCAGTGCCTGTATTCTTATTCAAGAGATGA
Homology
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BLAST of CSPI06G11120 vs. Swiss-Prot
Match: YTQB_BACSU (Putative rRNA methylase YtqB OS=Bacillus subtilis (strain 168) GN=ytqB PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 8.4e-20
Identity = 59/165 (35.76%), Postives = 90/165 (54.55%), Query Frame = 1 

Query: 76  KRATEVAHSVWKCVVKKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQNEALES 135
           K+    +  + K    +GD VVDAT GNG+DT  + ++V +   +  VYA D+Q  A+ +
Sbjct: 4   KKILPYSKELLKMAAGEGDIVVDATMGNGHDTQFLAELVGE---NGHVYAFDIQESAVAN 63

Query: 136 TSALLDESLSEKEKKLVKLSSICHSRMEDVILEDS--PVSLVAFNLGYLPGGNKAITTKS 195
           T     E L +  +    L    H ++ + +  ++   V+   FNLGYLPGG+K+ITT  
Sbjct: 64  TK----ERLGDMYQARTTLFHKSHDKIAESLPPETHGKVAAAVFNLGYLPGGDKSITTNG 123

Query: 196 ETTFQALKAAHRILKPGGLISLVVYVGHPGGMEELETIEKFSSDL 239
            +T +A++    I+K  GLI LVVY GHP G  E   + +F  DL
Sbjct: 124 SSTIKAIEQLLSIMKDEGLIVLVVYHGHPEGKAEKNDVLEFCRDL 161

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BLAST of CSPI06G11120 vs. TrEMBL
Match: A0A0A0KEF8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G136560 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 3.4e-145
Identity = 262/265 (98.87%), Postives = 264/265 (99.62%), Query Frame = 1 

Query: 1   MLSLKFGSKWVAVATSESVVGRQRHLRNLCCFSNRIQSNGLSSQYQIDFNSPLSSKHSLP 60
           MLSLKFGSKWVAVATSESVVGRQRHLR+LCCFSNRIQSNGLSSQYQIDFNSPLSSKHSL 
Sbjct: 1   MLSLKFGSKWVAVATSESVVGRQRHLRDLCCFSNRIQSNGLSSQYQIDFNSPLSSKHSLS 60

Query: 61  LEGLEDVMVGYFFGKKRATEVAHSVWKCVVKKGDTVVDATCGNGYDTLAMVKMVADESGS 120
           LEGLEDVMVGYFFGKKRATEVAHSVWKC+VKKGDTVVDATCGNGYDTLAMVKMVADESGS
Sbjct: 61  LEGLEDVMVGYFFGKKRATEVAHSVWKCIVKKGDTVVDATCGNGYDTLAMVKMVADESGS 120

Query: 121 ARVYAMDVQNEALESTSALLDESLSEKEKKLVKLSSICHSRMEDVILEDSPVSLVAFNLG 180
           ARVYAMDVQNEALESTSALLDESLSEKEKKLVKLSSICHSRMEDVILEDSPVSLVAFNLG
Sbjct: 121 ARVYAMDVQNEALESTSALLDESLSEKEKKLVKLSSICHSRMEDVILEDSPVSLVAFNLG 180

Query: 181 YLPGGNKAITTKSETTFQALKAAHRILKPGGLISLVVYVGHPGGMEELETIEKFSSDLAV 240
           YLPGGNKAITTKSETTFQALKAAHRILKPGGLISLVVYVGHPGGMEELETIEKFSSDLAV
Sbjct: 181 YLPGGNKAITTKSETTFQALKAAHRILKPGGLISLVVYVGHPGGMEELETIEKFSSDLAV 240

Query: 241 ENWICCKLQMLNRPLAPVPVFLFKR 266
           ENWICCKLQMLNRPLAPVPVFLFKR
Sbjct: 241 ENWICCKLQMLNRPLAPVPVFLFKR 265

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BLAST of CSPI06G11120 vs. TrEMBL
Match: B9HGT8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s08000g PE=4 SV=2)

HSP 1 Score: 314.7 bits (805), Expect = 1.1e-82
Identity = 154/220 (70.00%), Postives = 184/220 (83.64%), Query Frame = 1 

Query: 46  QIDFNSPLSSKHSLPLEGLEDVMVGYFFGKKRATEVAHSVWKCVVKKGDTVVDATCGNGY 105
           ++  N+ ++S    PL G E+ +VGY FGKK+ATEVAH +WK VV+ GDTV+DATCGNGY
Sbjct: 41  KLSANTAITSLMQNPLSGAEEDLVGYVFGKKKATEVAHLIWKRVVQNGDTVIDATCGNGY 100

Query: 106 DTLAMVKMVADESGSARVYAMDVQNEALESTSALLDESLSEKEKKLVKLSSICHSRMEDV 165
           DTLAM+KMVADE G  RVY MD+Q +AL+ TS+LLDES++ KEK+LVKL SICHSRME++
Sbjct: 101 DTLAMLKMVADELGRGRVYGMDIQGDALKRTSSLLDESVTLKEKELVKLFSICHSRMEEI 160

Query: 166 ILEDSPVSLVAFNLGYLPGGNKAITTKSETTFQALKAAHRILKPGGLISLVVYVGHPGGM 225
           +  +SPV LVAFNLGYLPGG+K ITT SETT  AL+AA +IL PGGLISLVVYVGHPGGM
Sbjct: 161 VPANSPVRLVAFNLGYLPGGDKTITTASETTQLALEAAKKILIPGGLISLVVYVGHPGGM 220

Query: 226 EELETIEKFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR 266
           EELET+E F+S L+V+NWICCK QMLNRPLAPV V LFKR
Sbjct: 221 EELETVEAFASGLSVDNWICCKFQMLNRPLAPVLVLLFKR 260

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BLAST of CSPI06G11120 vs. TrEMBL
Match: B9RHZ5_RICCO (S-adenosylmethionine-dependent methyltransferase, putative OS=Ricinus communis GN=RCOM_1574690 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.3e-80
Identity = 147/213 (69.01%), Postives = 181/213 (84.98%), Query Frame = 1 

Query: 53  LSSKHSLPLEGLEDVMVGYFFGKKRATEVAHSVWKCVVKKGDTVVDATCGNGYDTLAMVK 112
           ++S    P  GLED +VGY  GKK+ATEVAH VWK V++KGDTVVDATCGNG+DTLA++K
Sbjct: 54  ITSSVDSPFSGLEDDLVGYVLGKKKATEVAHLVWKHVLQKGDTVVDATCGNGHDTLALLK 113

Query: 113 MVADESGSARVYAMDVQNEALESTSALLDESLSEKEKKLVKLSSICHSRMEDVILEDSPV 172
           MVADESG+  VY MD+Q++AL++TS+LLDE+++ +EK+LVKL SICHSRME+++ E++PV
Sbjct: 114 MVADESGNGHVYGMDIQSDALDNTSSLLDETVTSEEKELVKLFSICHSRMEEIVPENTPV 173

Query: 173 SLVAFNLGYLPGGNKAITTKSETTFQALKAAHRILKPGGLISLVVYVGHPGGMEELETIE 232
            LVAFNLGYLPGG+KAITT  E T  AL+AA R+L PGGLISLVVYVGHPGG EELET+E
Sbjct: 174 RLVAFNLGYLPGGDKAITTVPEKTLLALEAAKRVLMPGGLISLVVYVGHPGGREELETVE 233

Query: 233 KFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR 266
            F+S L V++WICCK QMLNRP+APV  FLFKR
Sbjct: 234 TFASGLPVDDWICCKFQMLNRPVAPVVAFLFKR 266

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BLAST of CSPI06G11120 vs. TrEMBL
Match: A0A0B2SWH0_GLYSO (Putative rRNA methylase ytqB OS=Glycine soja GN=glysoja_019393 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 8.6e-80
Identity = 148/238 (62.18%), Postives = 185/238 (77.73%), Query Frame = 1 

Query: 30  CCFSNRIQSNGLSSQYQIDFNSPLSSKH--SLPLEGLEDVMVGYFFGKKRATEVAHSVWK 89
           CC+   I+ NG+ S      +S  SS      P  GLED +V Y FGKKRAT++AH VWK
Sbjct: 48  CCYEKPIKQNGIFSVASDLQSSSFSSSFPKDSPFSGLEDALVSYLFGKKRATDIAHMVWK 107

Query: 90  CVVKKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQNEALESTSALLDESLSEK 149
            VV+KGDTV+DATCGNG+DTLAM+ +VAD+S +  VYA+D+Q +AL++TS LL+ESL+  
Sbjct: 108 HVVQKGDTVIDATCGNGFDTLAMLNLVADDSHNGCVYALDIQKDALDNTSLLLEESLNPN 167

Query: 150 EKKLVKLSSICHSRMEDVILEDSPVSLVAFNLGYLPGGNKAITTKSETTFQALKAAHRIL 209
           EK+LVKL +ICHS+ME+ +  ++ V LVAFNLGYLPGG+K I T+S+TT  AL+AA RIL
Sbjct: 168 EKQLVKLFNICHSKMENAVPRNASVRLVAFNLGYLPGGDKEIITRSKTTLLALEAAKRIL 227

Query: 210 KPGGLISLVVYVGHPGGMEELETIEKFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR 266
            PGGLIS+VVYVGHPGG EELE +E F+  L VENWICCKLQMLNRP AP+P+FLFKR
Sbjct: 228 MPGGLISIVVYVGHPGGREELEVVESFAGRLCVENWICCKLQMLNRPCAPIPIFLFKR 285

[Close]
BLAST of CSPI06G11120 vs. TrEMBL
Match: A0A0B0MP09_GOSAR (Putative rRNA methylase ytqB OS=Gossypium arboreum GN=F383_20250 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 3.3e-79
Identity = 152/240 (63.33%), Postives = 189/240 (78.75%), Query Frame = 1 

Query: 27  RNLCCFSNRI-QSNGLSSQYQIDFNSPLSSKHSLPLEGLEDVMVGYFFGKKRATEVAHSV 86
           + LCC +N +  +NG +S             +S PL GLED +VGY FGKK+ATEVAH V
Sbjct: 18  KTLCCSTNSLLHTNGGTS-------------NSSPLSGLEDELVGYIFGKKKATEVAHLV 77

Query: 87  WKCVVKKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQNEALESTSALLDESLS 146
           W+ V+ KGD V+DATCGNGYDT+AM+KMVADESG  RVY +D+Q EALE+TS+LLDE+++
Sbjct: 78  WRHVLHKGDIVIDATCGNGYDTVAMLKMVADESGHGRVYGIDIQTEALENTSSLLDETVT 137

Query: 147 EKEKKLVKLSSICHSRMEDVILEDSPVSLVAFNLGYLPGGNKAITTKSETTFQALKAAHR 206
           +KEK+LVKL  ICHSRM++V+ E++ V LVAFNLGYLPGG+K I T S+TT  AL+A+ +
Sbjct: 138 QKEKELVKLFPICHSRMDEVLPENTAVRLVAFNLGYLPGGDKGIITTSKTTLLALEASKK 197

Query: 207 ILKPGGLISLVVYVGHPGGMEELETIEKFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR 266
           +L  GGLISLVVYVGHPGG EELET+E F+S L V+ WICCK QMLNRPLAPV VF+FKR
Sbjct: 198 MLILGGLISLVVYVGHPGGREELETVEAFASGLCVDGWICCKFQMLNRPLAPVLVFIFKR 244

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BLAST of CSPI06G11120 vs. TAIR10
Match: AT1G16445.1 (AT1G16445.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 293.9 bits (751), Expect = 1.0e-79
Identity = 142/219 (64.84%), Postives = 176/219 (80.37%), Query Frame = 1 

Query: 49  FNSPLSSKHSLPLEGLEDVMVGYFFGKKRATEVAHSVWKCVVKKGDTVVDATCGNGYDTL 108
           F+S  S   + P+ GLEDV VGY FG+K+ATEVAH VW+ V++KGDTV+DATCGNG DTL
Sbjct: 54  FSSTPSHSRNFPIRGLEDVFVGYLFGRKKATEVAHVVWEQVIQKGDTVIDATCGNGNDTL 113

Query: 109 AMVKMVADESGSAR--VYAMDVQNEALESTSALLDESLSEKEKKLVKLSSICHSRMEDVI 168
           AM+KMV  +S      VYAMD+Q +A+ESTS+LLD+++  KEK+ VKL ++CHS+M +++
Sbjct: 114 AMLKMVMHDSVGCGGYVYAMDIQKDAIESTSSLLDQAVGSKEKECVKLFNLCHSKMGEIV 173

Query: 169 LEDSPVSLVAFNLGYLPGGNKAITTKSETTFQALKAAHRILKPGGLISLVVYVGHPGGME 228
            E++ V +VAFNLGYLPGGNK+I T S+TT  ALKAA RILKPGGLISLVVY+GHPGG E
Sbjct: 174 PENARVRMVAFNLGYLPGGNKSIITLSDTTLSALKAAERILKPGGLISLVVYIGHPGGRE 233

Query: 229 ELETIEKFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR 266
           ELE +E F S L V +WICCK QMLNRPLAPV VF+FKR
Sbjct: 234 ELEVVEAFGSGLPVSDWICCKFQMLNRPLAPVLVFMFKR 272

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BLAST of CSPI06G11120 vs. NCBI nr
Match: gi|449444276|ref|XP_004139901.1| (PREDICTED: uncharacterized protein LOC101214958 isoform X1 [Cucumis sativus])

HSP 1 Score: 522.3 bits (1344), Expect = 4.9e-145
Identity = 262/265 (98.87%), Postives = 264/265 (99.62%), Query Frame = 1 

Query: 1   MLSLKFGSKWVAVATSESVVGRQRHLRNLCCFSNRIQSNGLSSQYQIDFNSPLSSKHSLP 60
           MLSLKFGSKWVAVATSESVVGRQRHLR+LCCFSNRIQSNGLSSQYQIDFNSPLSSKHSL 
Sbjct: 1   MLSLKFGSKWVAVATSESVVGRQRHLRDLCCFSNRIQSNGLSSQYQIDFNSPLSSKHSLS 60

Query: 61  LEGLEDVMVGYFFGKKRATEVAHSVWKCVVKKGDTVVDATCGNGYDTLAMVKMVADESGS 120
           LEGLEDVMVGYFFGKKRATEVAHSVWKC+VKKGDTVVDATCGNGYDTLAMVKMVADESGS
Sbjct: 61  LEGLEDVMVGYFFGKKRATEVAHSVWKCIVKKGDTVVDATCGNGYDTLAMVKMVADESGS 120

Query: 121 ARVYAMDVQNEALESTSALLDESLSEKEKKLVKLSSICHSRMEDVILEDSPVSLVAFNLG 180
           ARVYAMDVQNEALESTSALLDESLSEKEKKLVKLSSICHSRMEDVILEDSPVSLVAFNLG
Sbjct: 121 ARVYAMDVQNEALESTSALLDESLSEKEKKLVKLSSICHSRMEDVILEDSPVSLVAFNLG 180

Query: 181 YLPGGNKAITTKSETTFQALKAAHRILKPGGLISLVVYVGHPGGMEELETIEKFSSDLAV 240
           YLPGGNKAITTKSETTFQALKAAHRILKPGGLISLVVYVGHPGGMEELETIEKFSSDLAV
Sbjct: 181 YLPGGNKAITTKSETTFQALKAAHRILKPGGLISLVVYVGHPGGMEELETIEKFSSDLAV 240

Query: 241 ENWICCKLQMLNRPLAPVPVFLFKR 266
           ENWICCKLQMLNRPLAPVPVFLFKR
Sbjct: 241 ENWICCKLQMLNRPLAPVPVFLFKR 265

[Close]
BLAST of CSPI06G11120 vs. NCBI nr
Match: gi|778713068|ref|XP_011656977.1| (PREDICTED: uncharacterized protein LOC101214958 isoform X2 [Cucumis sativus])

HSP 1 Score: 516.2 bits (1328), Expect = 3.5e-143
Identity = 261/265 (98.49%), Postives = 263/265 (99.25%), Query Frame = 1 

Query: 1   MLSLKFGSKWVAVATSESVVGRQRHLRNLCCFSNRIQSNGLSSQYQIDFNSPLSSKHSLP 60
           MLSLKFGSKWVAVATSESVVGRQRHLR+LCCFSNRIQSNGLSSQYQIDFNSPLSSKHSL 
Sbjct: 1   MLSLKFGSKWVAVATSESVVGRQRHLRDLCCFSNRIQSNGLSSQYQIDFNSPLSSKHSLS 60

Query: 61  LEGLEDVMVGYFFGKKRATEVAHSVWKCVVKKGDTVVDATCGNGYDTLAMVKMVADESGS 120
           LEGLEDVMVGYFFGKKRATEVAHSVWKC+VKKGDTVVDATCGNGYDTLAMVKMVADESGS
Sbjct: 61  LEGLEDVMVGYFFGKKRATEVAHSVWKCIVKKGDTVVDATCGNGYDTLAMVKMVADESGS 120

Query: 121 ARVYAMDVQNEALESTSALLDESLSEKEKKLVKLSSICHSRMEDVILEDSPVSLVAFNLG 180
           ARVYAMDVQNEALESTSALLDESLSEKE KLVKLSSICHSRMEDVILEDSPVSLVAFNLG
Sbjct: 121 ARVYAMDVQNEALESTSALLDESLSEKE-KLVKLSSICHSRMEDVILEDSPVSLVAFNLG 180

Query: 181 YLPGGNKAITTKSETTFQALKAAHRILKPGGLISLVVYVGHPGGMEELETIEKFSSDLAV 240
           YLPGGNKAITTKSETTFQALKAAHRILKPGGLISLVVYVGHPGGMEELETIEKFSSDLAV
Sbjct: 181 YLPGGNKAITTKSETTFQALKAAHRILKPGGLISLVVYVGHPGGMEELETIEKFSSDLAV 240

Query: 241 ENWICCKLQMLNRPLAPVPVFLFKR 266
           ENWICCKLQMLNRPLAPVPVFLFKR
Sbjct: 241 ENWICCKLQMLNRPLAPVPVFLFKR 264

[Close]
BLAST of CSPI06G11120 vs. NCBI nr
Match: gi|743926111|ref|XP_011007212.1| (PREDICTED: uncharacterized protein LOC105112966 isoform X1 [Populus euphratica])

HSP 1 Score: 320.1 bits (819), Expect = 3.7e-84
Identity = 157/216 (72.69%), Postives = 185/216 (85.65%), Query Frame = 1 

Query: 50  NSPLSSKHSLPLEGLEDVMVGYFFGKKRATEVAHSVWKCVVKKGDTVVDATCGNGYDTLA 109
           N+ ++S    PL G E+ +VGY FGKK+ATEVAH +WK VV+ GDTV+DATCGNGYDTLA
Sbjct: 45  NTAITSLVQYPLSGAEEDLVGYVFGKKKATEVAHLIWKRVVQNGDTVIDATCGNGYDTLA 104

Query: 110 MVKMVADESGSARVYAMDVQNEALESTSALLDESLSEKEKKLVKLSSICHSRMEDVILED 169
           M+KMVADESG  RVY MD+Q +AL+STS+LLDES++ KEK+LVKL SICHSRME+++ E+
Sbjct: 105 MLKMVADESGRGRVYGMDIQGDALKSTSSLLDESVTWKEKELVKLFSICHSRMEEIVPEN 164

Query: 170 SPVSLVAFNLGYLPGGNKAITTKSETTFQALKAAHRILKPGGLISLVVYVGHPGGMEELE 229
           SPV LVAFNLGYLPGG+K ITT SETT  AL+AA +IL PGGLISLVVYVGHPGGMEELE
Sbjct: 165 SPVRLVAFNLGYLPGGDKMITTVSETTQLALEAAKKILIPGGLISLVVYVGHPGGMEELE 224

Query: 230 TIEKFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR 266
           T+E F+S L+V+NWICCK QMLNRPLAPV V LFKR
Sbjct: 225 TVEAFASGLSVDNWICCKFQMLNRPLAPVLVLLFKR 260

[Close]
BLAST of CSPI06G11120 vs. NCBI nr
Match: gi|743926113|ref|XP_011007213.1| (PREDICTED: uncharacterized protein LOC105112966 isoform X2 [Populus euphratica])

HSP 1 Score: 320.1 bits (819), Expect = 3.7e-84
Identity = 157/216 (72.69%), Postives = 185/216 (85.65%), Query Frame = 1 

Query: 50  NSPLSSKHSLPLEGLEDVMVGYFFGKKRATEVAHSVWKCVVKKGDTVVDATCGNGYDTLA 109
           N+ ++S    PL G E+ +VGY FGKK+ATEVAH +WK VV+ GDTV+DATCGNGYDTLA
Sbjct: 45  NTAITSLVQYPLSGAEEDLVGYVFGKKKATEVAHLIWKRVVQNGDTVIDATCGNGYDTLA 104

Query: 110 MVKMVADESGSARVYAMDVQNEALESTSALLDESLSEKEKKLVKLSSICHSRMEDVILED 169
           M+KMVADESG  RVY MD+Q +AL+STS+LLDES++ KEK+LVKL SICHSRME+++ E+
Sbjct: 105 MLKMVADESGRGRVYGMDIQGDALKSTSSLLDESVTWKEKELVKLFSICHSRMEEIVPEN 164

Query: 170 SPVSLVAFNLGYLPGGNKAITTKSETTFQALKAAHRILKPGGLISLVVYVGHPGGMEELE 229
           SPV LVAFNLGYLPGG+K ITT SETT  AL+AA +IL PGGLISLVVYVGHPGGMEELE
Sbjct: 165 SPVRLVAFNLGYLPGGDKMITTVSETTQLALEAAKKILIPGGLISLVVYVGHPGGMEELE 224

Query: 230 TIEKFSSDLAVENWICCKLQMLNRPLAPVPVFLFKR 266
           T+E F+S L+V+NWICCK QMLNRPLAPV V LFKR
Sbjct: 225 TVEAFASGLSVDNWICCKFQMLNRPLAPVLVLLFKR 260

[Close]
BLAST of CSPI06G11120 vs. NCBI nr
Match: gi|743926115|ref|XP_011007214.1| (PREDICTED: uncharacterized protein LOC105112966 isoform X3 [Populus euphratica])

HSP 1 Score: 318.2 bits (814), Expect = 1.4e-83
Identity = 156/215 (72.56%), Postives = 184/215 (85.58%), Query Frame = 1 

Query: 50  NSPLSSKHSLPLEGLEDVMVGYFFGKKRATEVAHSVWKCVVKKGDTVVDATCGNGYDTLA 109
           N+ ++S    PL G E+ +VGY FGKK+ATEVAH +WK VV+ GDTV+DATCGNGYDTLA
Sbjct: 45  NTAITSLVQYPLSGAEEDLVGYVFGKKKATEVAHLIWKRVVQNGDTVIDATCGNGYDTLA 104

Query: 110 MVKMVADESGSARVYAMDVQNEALESTSALLDESLSEKEKKLVKLSSICHSRMEDVILED 169
           M+KMVADESG  RVY MD+Q +AL+STS+LLDES++ KEK+LVKL SICHSRME+++ E+
Sbjct: 105 MLKMVADESGRGRVYGMDIQGDALKSTSSLLDESVTWKEKELVKLFSICHSRMEEIVPEN 164

Query: 170 SPVSLVAFNLGYLPGGNKAITTKSETTFQALKAAHRILKPGGLISLVVYVGHPGGMEELE 229
           SPV LVAFNLGYLPGG+K ITT SETT  AL+AA +IL PGGLISLVVYVGHPGGMEELE
Sbjct: 165 SPVRLVAFNLGYLPGGDKMITTVSETTQLALEAAKKILIPGGLISLVVYVGHPGGMEELE 224

Query: 230 TIEKFSSDLAVENWICCKLQMLNRPLAPVPVFLFK 265
           T+E F+S L+V+NWICCK QMLNRPLAPV V LFK
Sbjct: 225 TVEAFASGLSVDNWICCKFQMLNRPLAPVLVLLFK 259

The following BLAST results are available for this feature:
BLAST of CSPI06G11120 vs. Swiss-Prot
Match NameE-valueIdentityDescription
YTQB_BACSU8.4e-2035.76Putative rRNA methylase YtqB OS=Bacillus subtilis (strain 168) GN=ytqB PE=3 SV=1[more]
BLAST of CSPI06G11120 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KEF8_CUCSA3.4e-14598.87Uncharacterized protein OS=Cucumis sativus GN=Csa_6G136560 PE=4 SV=1[more]
B9HGT8_POPTR1.1e-8270.00Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s08000g PE=4 SV=2[more]
B9RHZ5_RICCO1.3e-8069.01S-adenosylmethionine-dependent methyltransferase, putative OS=Ricinus communis G... [more]
A0A0B2SWH0_GLYSO8.6e-8062.18Putative rRNA methylase ytqB OS=Glycine soja GN=glysoja_019393 PE=4 SV=1[more]
A0A0B0MP09_GOSAR3.3e-7963.33Putative rRNA methylase ytqB OS=Gossypium arboreum GN=F383_20250 PE=4 SV=1[more]
BLAST of CSPI06G11120 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G16445.11.0e-7964.84 S-adenosyl-L-methionine-dependent methyltransferases superfamily pro... [more]
BLAST of CSPI06G11120 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449444276|ref|XP_004139901.1|4.9e-14598.87PREDICTED: uncharacterized protein LOC101214958 isoform X1 [Cucumis sativus][more]
gi|778713068|ref|XP_011656977.1|3.5e-14398.49PREDICTED: uncharacterized protein LOC101214958 isoform X2 [Cucumis sativus][more]
gi|743926111|ref|XP_011007212.1|3.7e-8472.69PREDICTED: uncharacterized protein LOC105112966 isoform X1 [Populus euphratica][more]
gi|743926113|ref|XP_011007213.1|3.7e-8472.69PREDICTED: uncharacterized protein LOC105112966 isoform X2 [Populus euphratica][more]
gi|743926115|ref|XP_011007214.1|1.4e-8372.56PREDICTED: uncharacterized protein LOC105112966 isoform X3 [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010719rRNA_methylase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G11120.1CSPI06G11120.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010719Putative rRNA methylasePFAMPF06962rRNA_methylasecoord: 123..262
score: 7.0
NoneNo IPR availablePANTHERPTHR35276FAMILY NOT NAMEDcoord: 33..265
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G11120Cla013460Watermelon (97103) v1cpiwmB544
CSPI06G11120Csa6G136560Cucumber (Chinese Long) v2cpicuB314
CSPI06G11120MELO3C019639Melon (DHL92) v3.5.1cpimeB420
CSPI06G11120ClCG02G018630Watermelon (Charleston Gray)cpiwcgB472
CSPI06G11120Lsi10G015180Bottle gourd (USVL1VR-Ls)cpilsiB409
CSPI06G11120MELO3C019639.2Melon (DHL92) v3.6.1cpimedB433
CSPI06G11120CsaV3_6G013550Cucumber (Chinese Long) v3cpicucB364
CSPI06G11120Cla97C02G044550Watermelon (97103) v2cpiwmbB465
CSPI06G11120Bhi10G000737Wax gourdcpiwgoB602
CSPI06G11120Cucsa.118480Cucumber (Gy14) v1cgycpiB156
CSPI06G11120CmaCh20G002800Cucurbita maxima (Rimu)cmacpiB570
CSPI06G11120CmoCh20G003030Cucurbita moschata (Rifu)cmocpiB558
CSPI06G11120Cp4.1LG16g07050Cucurbita pepo (Zucchini)cpecpiB284
CSPI06G11120CsGy6G011260Cucumber (Gy14) v2cgybcpiB288
CSPI06G11120Carg03426Silver-seed gourdcarcpiB0370
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G11120Bottle gourd (USVL1VR-Ls)cpilsiB429
CSPI06G11120Melon (DHL92) v3.6.1cpimedB449
CSPI06G11120Cucumber (Gy14) v2cgybcpiB329
CSPI06G11120Silver-seed gourdcarcpiB0427
CSPI06G11120Silver-seed gourdcarcpiB0566
CSPI06G11120Cucumber (Chinese Long) v3cpicucB376
CSPI06G11120Watermelon (97103) v2cpiwmbB535
CSPI06G11120Wax gourdcpiwgoB567
CSPI06G11120Wild cucumber (PI 183967)cpicpiB190
CSPI06G11120Cucumber (Gy14) v1cgycpiB356
CSPI06G11120Cucurbita maxima (Rimu)cmacpiB140
CSPI06G11120Cucurbita maxima (Rimu)cmacpiB528
CSPI06G11120Cucurbita moschata (Rifu)cmocpiB129
CSPI06G11120Cucurbita moschata (Rifu)cmocpiB521
CSPI06G11120Cucumber (Chinese Long) v2cpicuB321
CSPI06G11120Melon (DHL92) v3.5.1cpimeB456
CSPI06G11120Watermelon (Charleston Gray)cpiwcgB439
CSPI06G11120Watermelon (97103) v1cpiwmB461
CSPI06G11120Cucurbita pepo (Zucchini)cpecpiB252
CSPI06G11120Cucurbita pepo (Zucchini)cpecpiB690