CSPI06G10620 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G10620
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 9230771 .. 9230980 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATCAGAGGGAAGAAGTGCAGTGGCGGTGGCGGTGGCGGTGGTAGCCTTGGCCGTCCTGAAGAGTGGGTCCGGGCGGTGGGCACCACAGGAAAAGGGATTGGGAAGAGGAAACAAAGAGAAACAGAGGAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAATGGAATTGGGGGTTTACGGAAAAGGAAAAGGAATGACATTTCCTTAG

mRNA sequence

ATGACATCAGAGGGAAGAAGTGCAGTGGCGGTGGCGGTGGCGGTGGTAGCCTTGGCCGTCCTGAAGAGTGGGTCCGGGCGGTGGGCACCACAGGAAAAGGGATTGGGAAGAGGAAACAAAGAGAAACAGAGGAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAATGGAATTGGGGGTTTACGGAAAAGGAAAAGGAATGACATTTCCTTAG

Coding sequence (CDS)

ATGACATCAGAGGGAAGAAGTGCAGTGGCGGTGGCGGTGGCGGTGGTAGCCTTGGCCGTCCTGAAGAGTGGGTCCGGGCGGTGGGCACCACAGGAAAAGGGATTGGGAAGAGGAAACAAAGAGAAACAGAGGAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAATGGAATTGGGGGTTTACGGAAAAGGAAAAGGAATGACATTTCCTTAG
Homology
[Close]
BLAST of CSPI06G10620 vs. TrEMBL
Match: A0A0A0KB46_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128630 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 7.1e-26
Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 1 

Query: 1  MTSEGRSAVAV--AVAVVALAVLKSGSGRWAPQEKGLGRGNKEKQRRRRRGRGRGRMELG 60
          MTSEGRSAVAV  AVAVVALAVLKSGSGRWAPQEKGLGRGNKEKQRRRRRGRGRGRMELG
Sbjct: 1  MTSEGRSAVAVAVAVAVVALAVLKSGSGRWAPQEKGLGRGNKEKQRRRRRGRGRGRMELG 60

Query: 61 VYGKGKGMTFP 70
          VYGKGKGMTFP
Sbjct: 61 VYGKGKGMTFP 71

[Close]
BLAST of CSPI06G10620 vs. NCBI nr
Match: gi|700191549|gb|KGN46753.1| (hypothetical protein Csa_6G128630 [Cucumis sativus])

HSP 1 Score: 124.0 bits (310), Expect = 1.0e-25
Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 1 

Query: 1  MTSEGRSAVAV--AVAVVALAVLKSGSGRWAPQEKGLGRGNKEKQRRRRRGRGRGRMELG 60
          MTSEGRSAVAV  AVAVVALAVLKSGSGRWAPQEKGLGRGNKEKQRRRRRGRGRGRMELG
Sbjct: 1  MTSEGRSAVAVAVAVAVVALAVLKSGSGRWAPQEKGLGRGNKEKQRRRRRGRGRGRMELG 60

Query: 61 VYGKGKGMTFP 70
          VYGKGKGMTFP
Sbjct: 61 VYGKGKGMTFP 71

The following BLAST results are available for this feature:
BLAST of CSPI06G10620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI06G10620 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KB46_CUCSA7.1e-2697.18Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128630 PE=4 SV=1[more]
BLAST of CSPI06G10620 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI06G10620 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191549|gb|KGN46753.1|1.0e-2597.18hypothetical protein Csa_6G128630 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G10620.1CSPI06G10620.1mRNA