CSPI06G09280 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G09280
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 7866659 .. 7867120 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTAAATCTTCAATTGGTAAGTTAGTTACTTGTTCAATCTTATAGTAAAACAGTAATTTACTTGTGTACTTTTATATTTGAAACTTCCACTAAAGTCTTGTATGAATGAAAATTGTAGGACCACAAGTTCCTCTATATGATGCTTGTACTAGTGGTGTTGTATCATCCTTGAATATGGAGCTGAAGGATGTTCCCTCGGCTGTACCTCCACCTCCCCCACCAACTCCTTTGCCAGACTCTGCTAAGTTGGGTTCTGTTGATGGTCCTGCTCTACGATTTCTTACTTTTACCTCCTCCACCTCCATTGGCACCTATGCCTGTAGCATCAAACTTGGGTTTACCATTACTTCCACCACCTCCTGGACGTCCACCAAGAGAACAAGTGGTAGGCCGCCCTCCTTTTTTGTTGCTTCCATCTTTGCAGCAGTCTACAATGATGCTCCTGTCTGGAAGCAGTGA

mRNA sequence

ATGTTTAAATCTTCAATTGGACCACAAGTTCCTCTATATGATGCTTGTACTAGTGGTGTTGTATCATCCTTGAATATGGAGCTGAAGGATGTTCCCTCGGCTGTACCTCCACCTCCCCCACCAACTCCTTTGCCAGACTCTGCTAAGTTGGGTTCTGTTGATGGTCCTGCTCTACGATTTCTTACTTTTACCTCCTCCACCTCCATTGGCACCTATGCCTGTAGCATCAAACTTGGGTTTACCATTACTTCCACCACCTCCTGGACGTCCACCAAGAGAACAAGTGGTAGGCCGCCCTCCTTTTTTGTTGCTTCCATCTTTGCAGCAGTCTACAATGATGCTCCTGTCTGGAAGCAGTGA

Coding sequence (CDS)

ATGTTTAAATCTTCAATTGGACCACAAGTTCCTCTATATGATGCTTGTACTAGTGGTGTTGTATCATCCTTGAATATGGAGCTGAAGGATGTTCCCTCGGCTGTACCTCCACCTCCCCCACCAACTCCTTTGCCAGACTCTGCTAAGTTGGGTTCTGTTGATGGTCCTGCTCTACGATTTCTTACTTTTACCTCCTCCACCTCCATTGGCACCTATGCCTGTAGCATCAAACTTGGGTTTACCATTACTTCCACCACCTCCTGGACGTCCACCAAGAGAACAAGTGGTAGGCCGCCCTCCTTTTTTGTTGCTTCCATCTTTGCAGCAGTCTACAATGATGCTCCTGTCTGGAAGCAGTGA
Homology
[Close]
BLAST of CSPI06G09280 vs. TrEMBL
Match: A0A0A0LQR9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G045630 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-16
Identity = 47/58 (81.03%), Postives = 49/58 (84.48%), Query Frame = 1 

Query: 1   MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL 59
           MFKSSIGP+VPL DA TSG   SLNME +DVP AVPPPPPP PLPDSAKLGS DGPAL
Sbjct: 149 MFKSSIGPRVPLSDASTSGAAPSLNMEPEDVPLAVPPPPPPPPLPDSAKLGSADGPAL 206

[Close]
BLAST of CSPI06G09280 vs. TrEMBL
Match: V7CDA6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G194500g PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.7e-09
Identity = 34/58 (58.62%), Postives = 40/58 (68.97%), Query Frame = 1 

Query: 1   MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL 59
           MFKSSIGP++PL  A +SG  SS+ ME +D   AVPPPPPP PLPD +   S DG  L
Sbjct: 149 MFKSSIGPRIPLSGASSSGAASSMEMETEDDVLAVPPPPPPPPLPDGSNASSADGTVL 206

[Close]
BLAST of CSPI06G09280 vs. TrEMBL
Match: A0A0S3R7Y2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G465500 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-07
Identity = 33/58 (56.90%), Postives = 38/58 (65.52%), Query Frame = 1 

Query: 1   MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL 59
           MFKSSIGP++PL  A +S   SS  ME +D   AVPPPPPP PLPD +   S DG  L
Sbjct: 149 MFKSSIGPRIPLSGASSSAGASSSTMETEDDVLAVPPPPPPPPLPDGSNASSADGTVL 206

[Close]
BLAST of CSPI06G09280 vs. TrEMBL
Match: A0A0L9TRR8_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g278600 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-07
Identity = 33/58 (56.90%), Postives = 38/58 (65.52%), Query Frame = 1 

Query: 1   MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL 59
           MFKSSIGP++PL  A +S   SS  ME +D   AVPPPPPP PLPD +   S DG  L
Sbjct: 149 MFKSSIGPRIPLSGASSSAGASSSTMETEDDVLAVPPPPPPPPLPDGSNASSADGTVL 206

[Close]
BLAST of CSPI06G09280 vs. TrEMBL
Match: A0A151SA90_CAJCA (WW domain-binding protein 11 OS=Cajanus cajan GN=KK1_026384 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.6e-07
Identity = 33/58 (56.90%), Postives = 38/58 (65.52%), Query Frame = 1 

Query: 1   MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL 59
           MFKSSIGP++PL  A +S   SSL  E +D   AVPPPPPP PLPD +   S DG  L
Sbjct: 149 MFKSSIGPRIPLSGASSSTAASSLATESEDDVLAVPPPPPPPPLPDGSSTSSADGAVL 206

[Close]
BLAST of CSPI06G09280 vs. NCBI nr
Match: gi|659067109|ref|XP_008437718.1| (PREDICTED: YLP motif-containing protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 95.5 bits (236), Expect = 6.7e-17
Identity = 48/58 (82.76%), Postives = 50/58 (86.21%), Query Frame = 1 

Query: 1   MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL 59
           MFKSSIGP+VPL DA TSG  SSLNME +DVP AVPPPPPP PLPDSAKLGS DGPAL
Sbjct: 127 MFKSSIGPRVPLSDASTSGAASSLNMEPEDVPLAVPPPPPPPPLPDSAKLGSADGPAL 184

[Close]
BLAST of CSPI06G09280 vs. NCBI nr
Match: gi|659067107|ref|XP_008437712.1| (PREDICTED: YLP motif-containing protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 95.5 bits (236), Expect = 6.7e-17
Identity = 48/58 (82.76%), Postives = 50/58 (86.21%), Query Frame = 1 

Query: 1   MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL 59
           MFKSSIGP+VPL DA TSG  SSLNME +DVP AVPPPPPP PLPDSAKLGS DGPAL
Sbjct: 149 MFKSSIGPRVPLSDASTSGAASSLNMEPEDVPLAVPPPPPPPPLPDSAKLGSADGPAL 206

[Close]
BLAST of CSPI06G09280 vs. NCBI nr
Match: gi|778657642|ref|XP_011651256.1| (PREDICTED: formin-like protein 14 isoform X2 [Cucumis sativus])

HSP 1 Score: 93.6 bits (231), Expect = 2.5e-16
Identity = 47/58 (81.03%), Postives = 49/58 (84.48%), Query Frame = 1 

Query: 1   MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL 59
           MFKSSIGP+VPL DA TSG   SLNME +DVP AVPPPPPP PLPDSAKLGS DGPAL
Sbjct: 127 MFKSSIGPRVPLSDASTSGAAPSLNMEPEDVPLAVPPPPPPPPLPDSAKLGSADGPAL 184

[Close]
BLAST of CSPI06G09280 vs. NCBI nr
Match: gi|449469478|ref|XP_004152447.1| (PREDICTED: WW domain-binding protein 11 isoform X1 [Cucumis sativus])

HSP 1 Score: 93.6 bits (231), Expect = 2.5e-16
Identity = 47/58 (81.03%), Postives = 49/58 (84.48%), Query Frame = 1 

Query: 1   MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL 59
           MFKSSIGP+VPL DA TSG   SLNME +DVP AVPPPPPP PLPDSAKLGS DGPAL
Sbjct: 149 MFKSSIGPRVPLSDASTSGAAPSLNMEPEDVPLAVPPPPPPPPLPDSAKLGSADGPAL 206

[Close]
BLAST of CSPI06G09280 vs. NCBI nr
Match: gi|593784637|ref|XP_007155359.1| (hypothetical protein PHAVU_003G194500g [Phaseolus vulgaris])

HSP 1 Score: 68.9 bits (167), Expect = 6.7e-09
Identity = 34/58 (58.62%), Postives = 40/58 (68.97%), Query Frame = 1 

Query: 1   MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL 59
           MFKSSIGP++PL  A +SG  SS+ ME +D   AVPPPPPP PLPD +   S DG  L
Sbjct: 149 MFKSSIGPRIPLSGASSSGAASSMEMETEDDVLAVPPPPPPPPLPDGSNASSADGTVL 206

The following BLAST results are available for this feature:
BLAST of CSPI06G09280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI06G09280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQR9_CUCSA1.8e-1681.03Uncharacterized protein OS=Cucumis sativus GN=Csa_1G045630 PE=4 SV=1[more]
V7CDA6_PHAVU4.7e-0958.62Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G194500g PE=4 SV=1[more]
A0A0S3R7Y2_PHAAN1.5e-0756.90Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G465500 PE=... [more]
A0A0L9TRR8_PHAAN1.5e-0756.90Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g278600 PE=4 SV=1[more]
A0A151SA90_CAJCA2.6e-0756.90WW domain-binding protein 11 OS=Cajanus cajan GN=KK1_026384 PE=4 SV=1[more]
BLAST of CSPI06G09280 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI06G09280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659067109|ref|XP_008437718.1|6.7e-1782.76PREDICTED: YLP motif-containing protein 1 isoform X2 [Cucumis melo][more]
gi|659067107|ref|XP_008437712.1|6.7e-1782.76PREDICTED: YLP motif-containing protein 1 isoform X1 [Cucumis melo][more]
gi|778657642|ref|XP_011651256.1|2.5e-1681.03PREDICTED: formin-like protein 14 isoform X2 [Cucumis sativus][more]
gi|449469478|ref|XP_004152447.1|2.5e-1681.03PREDICTED: WW domain-binding protein 11 isoform X1 [Cucumis sativus][more]
gi|593784637|ref|XP_007155359.1|6.7e-0958.62hypothetical protein PHAVU_003G194500g [Phaseolus vulgaris][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G09280.1CSPI06G09280.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G09280Silver-seed gourdcarcpiB0234
CSPI06G09280Silver-seed gourdcarcpiB0381
CSPI06G09280Silver-seed gourdcarcpiB0843
CSPI06G09280Cucumber (Chinese Long) v3cpicucB364
CSPI06G09280Cucumber (Chinese Long) v3cpicucB375
CSPI06G09280Watermelon (97103) v2cpiwmbB456
CSPI06G09280Watermelon (97103) v2cpiwmbB466
CSPI06G09280Wax gourdcpiwgoB566
CSPI06G09280Wax gourdcpiwgoB613
CSPI06G09280Wild cucumber (PI 183967)cpicpiB141
CSPI06G09280Wild cucumber (PI 183967)cpicpiB189
CSPI06G09280Cucumber (Gy14) v1cgycpiB111
CSPI06G09280Cucumber (Gy14) v1cgycpiB156
CSPI06G09280Cucurbita maxima (Rimu)cmacpiB527
CSPI06G09280Cucurbita maxima (Rimu)cmacpiB561
CSPI06G09280Cucurbita maxima (Rimu)cmacpiB623
CSPI06G09280Cucurbita moschata (Rifu)cmocpiB520
CSPI06G09280Cucurbita moschata (Rifu)cmocpiB551
CSPI06G09280Cucurbita moschata (Rifu)cmocpiB616
CSPI06G09280Cucumber (Chinese Long) v2cpicuB296
CSPI06G09280Cucumber (Chinese Long) v2cpicuB314
CSPI06G09280Cucumber (Chinese Long) v2cpicuB320
CSPI06G09280Melon (DHL92) v3.5.1cpimeB419
CSPI06G09280Melon (DHL92) v3.5.1cpimeB457
CSPI06G09280Melon (DHL92) v3.5.1cpimeB499
CSPI06G09280Watermelon (Charleston Gray)cpiwcgB448
CSPI06G09280Watermelon (Charleston Gray)cpiwcgB465
CSPI06G09280Watermelon (Charleston Gray)cpiwcgB473
CSPI06G09280Watermelon (97103) v1cpiwmB466
CSPI06G09280Watermelon (97103) v1cpiwmB535
CSPI06G09280Cucurbita pepo (Zucchini)cpecpiB251
CSPI06G09280Cucurbita pepo (Zucchini)cpecpiB294
CSPI06G09280Cucurbita pepo (Zucchini)cpecpiB757
CSPI06G09280Bottle gourd (USVL1VR-Ls)cpilsiB418
CSPI06G09280Bottle gourd (USVL1VR-Ls)cpilsiB432
CSPI06G09280Melon (DHL92) v3.6.1cpimedB414
CSPI06G09280Melon (DHL92) v3.6.1cpimedB450
CSPI06G09280Cucumber (Gy14) v2cgybcpiB151
CSPI06G09280Cucumber (Gy14) v2cgybcpiB288
CSPI06G09280Cucumber (Gy14) v2cgybcpiB328