CSPI06G08900 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTTCTCTTCTTCCCGCCTCCTTTCTCTCCCTTCTCTCTCTCTCTCTATCGATTCCAAGAACTCTCCATGGAATCAAAGCTTCGCACTATGCCTTCCAAACGCTCCTCCGTTGTTCATCAACCCCGAGCTCTACAAGCTGGATTCCACTTACCTTGCAAAAGACCTAAGACTACTCTCCCCCAACCGCACCCGGAAGAACATGCTTCCAATTTTTTTGCCAAAGATATACGCATCAAGCGAGTATTCTCCCCCAATTTACAGAATCACTCCTCGGTGTCATCCAGAGAGCCGATTAGCGATAGAGAAAGGCTAATAACCGTGAATGGAACTTGTTGGAATGAAGACGGTGGAGTCGGTAATACACATGTTGAATGCGATGAGGGTCGGCGATGTAATGGGAAGAGTGAGGAACCGGTGCACTCTACTCCTCCTGATGTGGATATTCTGACTCGGGGTTTTGTGTCGGCTTCTTCAAGTGGTTGTCCTCGATCAAGTAATGGAGGTGTTTTGGGAGATACTTGTGTGAAATCTGACTGTAGATTTGACTCTGTTGCTAGAACCGGATCGGTAAATATCTTCTTAAGTTGAATATTTCACAATTGGCTTGGTTTTATTTGTCTTTTGTGCTGATTTCTTGCAAATGTAGTCCTGTTGTTTTATTTAATAGGTCTCGTGGGGTTATAATTATAACTATAAGTTTATATTTTTGTTTAGCGATCGCCACTTGTATGATTCTTGATATTCTTTTGTTCATGTTGGTCTAATTTGGGTCTTGAAATTACGAATTAGGTGCTCAAACCATGTTCTAAACGAAAGTTATTCAAGGCTCCTGGCTCTATTGCCTACAAAAGATTGCTACCCTTTTTGATGGATAACGACAATTGTAACTTCTGTGCCCACTACATTTATTATTTTCTATCCAGGTTTGTTTTTAGGACTATACTTATTTCTATTGTTAATCTACTACAGACAAGCTACAAGATGATCCAAACTCAAAAAGTGAGAACAATTTGGTGAAGAAGTTGAATAATGAATCTGATCTGCGTAATCATGTCAAGGGCTCATCTTTTCTTGGTTCAGACACTTGTGTAAAGAATGCAATTTTTGCCTCCGGCATGTCATGTAAGACTACGAAGCTAAATTTACCACCTCCTGATAATGGAGATACTTCGAATTTTCAGAATGGTGGCGGTTTCAACAATAGCCAGAATACAATTAAAGAGGATTCTGGTTTGAAAAAAGATAATGCAGTTTGTGCCTCATCTCTTGACGAAGGGCTGACAGAGCAATCAAAAAATCCCGGGATAGATACGCTTGATAGTGGATCCATTTTTGTATCAGAAGTAGACAATGTTATGTCCCATGTTTCAGAGGATAGTAAAAGAGACGGTCATTTCAATGAACTCAAGATGTCATCATTAAATTCTAACATTGTTGATAGGCCATTGAATGAAGAAAGGAGGGATGGAAAACTTGGTAGTTCTACTGTTGGTGAAAATCATTGTAGCATTGCTACAGCGAGTAACAAGAAAAATGGCGCCTGTGTTAGAAACAAACTGGTGAGATACACGTAATGGTTTATTATTTTTATGCTTTTCTGCTTCCTCATTTAAACTTTATGCACGATTACTTTCAGTGAGTGCATAATATAATTTTGACATGAATATTCTACAGCCTTGAGAGTGATATCCAATTTGATCAACAAATTATTGTTTCATTGTTGTGTATTACTAATAAATCTAACAACTCGTTAGGTTCGCAATCCACTTGTACAACTGAAGTCAAAATACAGCCAATTTTCATTTAGCTATCGAAGGATGCGTCCATTCCTTGAGGATCTCTTCAAAGATAATCCAGAGAACTGTATGCATCCTCTCTCACAATTATAATATTTCTTTCATAATGTCATGCTTGTTTCTAATGCTATAGATTATCTTTAATGAATTTTTATATTTTTCAGGTGACTCGGGAAACATCAACAGTTCGGTACCAGAGAAAGAATTTCCAACTATGAATTTGCAACCACCGAGTTCAAACTCTCACAATTCCCAGGATAAATCTGAAGGCTTGGTATCTTGCAACATGCCAGTTGACGGAAACTCATATACTCCTTCAATGCATGTGTTGACTAGTAAGAAAGAAACAGATTGTGAAACAGATGAAGTTTTATTGCCTGCTGGAGTCGATGATAAACTTCTATCACCTCCAAACTTAACGTTGCACACTGAGCAGGAGATGTTGGATGAATGTAATTTGAAAACGGACCCTCAATTGCCTGGTGCAACATTTTTGAATGATCAAGCAGTGCTACCATTGTATCCTGCTGCTAGTTATGAAACTCTAATTGGAGAAGGATTCAGAATGACCTCTGAACAGTCACCAATCACTTCAGAAGACTGCACAAGTTTGAAAGATCGTGTTTCTGATGGTGCTAATATCGATGAGAGAAACAGCTTAGCACCAAATTCCTCTTCTGTAGAAGGAGGTATTCTGCCAGGAATTCACATAAATCATAGAAAGGGAATTCTAAAACGAAGCACACGAGGATGCAGAGGAATCTGCAATTGTCTGAACTGTTCCTCTTTTCGTCTTCATGCTGAAAGAGCATTTGAATTTTCTAGAAATCAACTGCAAGATGCTGAAGAAGTTGCTTCAGATTTGATGAAAGAGTTGTCGTATCTTCGCGGTGTCCTGGAAAAGTATTCTGATGTTGCAAAAGGGGATGCTGAATATCATCATTCAAATAAGGTAAGTGCTTAAATTAGATATTAATTTTTTTTATGCTTTTCCTCTGAAAGTTGGCTTGATTTAAGCTATTTCTATATCATATATAAACTAACAATGAAACTTTTGATATGTTCTTGTATTACATGCTAAAGCTAATTGATTGGCAGTCATTTTATTCCAAAACTTCAGTATTTCATTTGATTAATGGTGTGCTACTGTAATGCACATATTATCCTGGTAAATATCATCGTGGGAGAATTATTCATTCTAAAAACAGGAAACAATTACCTTATTTGATTTCTATTGTTGGAATTTATCATGACACCAGGACTGGACGGGGAGAACTTTAAATTTATATTTTTGGTCAAAAAGCCTCCATGGTCCTCAGCCAATTTTTATTATTCTCTTTTAATACTTTTCCAGGTGAAAGAAGCTTGTAGGAAAGCATCTGAAGCAGAGTTAACTGCCAAAGACCGCCTTCAACAAATGAACTATGAGCTTAACATTCATTGCAGAATCACGGTATTCCATTTACAAGTAGAAGTTTTCTATTTTCAACTTTAATCCTATAGAGATTATCTTTACTAAGTCGTTGAAAGTTCTGTTTTTGACAGTGTTCCCAACGACCGAATGTTAGGTTTTCTTGTGAAGTTGAGAAACTAGATATTGAAGATGTAAAATAGAGCAAAATGATGAACATTACAAATCTGTTACCGTCATAAAAGTTGCGGCCTTGACTCTTCAGCTTATGCAAGGCTGAGATTTCATGGATGGTCTTTCATTTCATTTGGGAATGCATCAGATGGGGAAAGGGTTGCATCTTGATGACGAAGGAACAGGTTTCATTCTAGATGATATCTACTTAATGCAATTTTTTAGACTCCTAAAATTCAAAGAGTCAATACAATTTTTTTTTTTCTTTAAAGAAAGAGAGTAGCATAGTAGTGATAGAGTGGATTATGTATCATGTAGAATACTGAGTGTTACGTGTACATTAACTTAATTTGTGGGACCTTCCCTTCTGCTAAATGGAATATTTGGTTGGCTAAAATGGATGATGGCTGGGGGTACCATATGCTCGTTTTTAGTGCTGGAAAATCTTTTGAAAAAGTATAACTTAAGTTGTCCACCGTGGGTTAAAATCATCAGTTGACTGGAAACATTCCAACCTCAACCTCAAGTCGGCATACATGCAGCTTTTCTTGGGATATACATTAGTTTAATTTATTTTGATGCATCAAAAGGTTTGATGTTTTGGCTACTCCACATGTTTATGAAGCATGTTGTGTAGAGATTAAGGATCAAGCTGCAATTTTCTCGACAGGGTTAAGGTGTAGATCAATTTGATAGAGCGAAAGTGTAGTGAAATATAAGATAATGTAATACAAAATATGATAACTCTTTTAAGTATTGGTGCTATGGGTGATTCTGGTTTGAATGACATAGTCGCATAAATTATAAACAGAAATGAGATTTGGACTAAAAGTATTATCTTAAGACTAAAAGAGGCCTAGAAGAGGCAGTTGATTTGGGTCTTGGTCTAAGCTAATATTATTGGTCTCGATGTAGGTCGAGCCTAATGAAGCATGCTTTGGCCCCAAGGATCAAATTGGGCCTAGGAGGGGGTTGTCGAAGTTAGCCAAATCTGAGGTCGAGCCTAACACGATGGCCACTGAAGCATGCCTTGACATGGGGAGAGAAAGAATGACCCTAACGTAG ATGGAATCAAAGCTTCGCACTATGCCTTCCAAACGCTCCTCCGTTGTTCATCAACCCCGAGCTCTACAAGCTGGATTCCACTTACCTTGCAAAAGACCTAAGACTACTCTCCCCCAACCGCACCCGGAAGAACATGCTTCCAATTTTTTTGCCAAAGATATACGCATCAAGCGAGTATTCTCCCCCAATTTACAGAATCACTCCTCGGTGTCATCCAGAGAGCCGATTAGCGATAGAGAAAGGCTAATAACCGTGAATGGAACTTGTTGGAATGAAGACGGTGGAGTCGGTAATACACATGTTGAATGCGATGAGGGTCGGCGATGTAATGGGAAGAGTGAGGAACCGGTGCACTCTACTCCTCCTGATGTGGATATTCTGACTCGGGGTTTTGTGTCGGCTTCTTCAAGTGGTTGTCCTCGATCAAGTAATGGAGGTGTTTTGGGAGATACTTGTGTGAAATCTGACTGTAGATTTGACTCTGTTGCTAGAACCGGATCGGTGCTCAAACCATGTTCTAAACGAAAGTTATTCAAGGCTCCTGGCTCTATTGCCTACAAAAGATTGCTACCCTTTTTGATGGATAACGACAATTACAAGCTACAAGATGATCCAAACTCAAAAAGTGAGAACAATTTGGTGAAGAAGTTGAATAATGAATCTGATCTGCGTAATCATGTCAAGGGCTCATCTTTTCTTGGTTCAGACACTTGTGTAAAGAATGCAATTTTTGCCTCCGGCATGTCATGTAAGACTACGAAGCTAAATTTACCACCTCCTGATAATGGAGATACTTCGAATTTTCAGAATGGTGGCGGTTTCAACAATAGCCAGAATACAATTAAAGAGGATTCTGGTTTGAAAAAAGATAATGCAGTTTGTGCCTCATCTCTTGACGAAGGGCTGACAGAGCAATCAAAAAATCCCGGGATAGATACGCTTGATAGTGGATCCATTTTTGTATCAGAAGTAGACAATGTTATGTCCCATGTTTCAGAGGATAGTAAAAGAGACGGTCATTTCAATGAACTCAAGATGTCATCATTAAATTCTAACATTGTTGATAGGCCATTGAATGAAGAAAGGAGGGATGGAAAACTTGGTAGTTCTACTGTTGGTGAAAATCATTGTAGCATTGCTACAGCGAGTAACAAGAAAAATGGCGCCTGTGTTAGAAACAAACTGGTTCGCAATCCACTTGTACAACTGAAGTCAAAATACAGCCAATTTTCATTTAGCTATCGAAGGATGCGTCCATTCCTTGAGGATCTCTTCAAAGATAATCCAGAGAACTGTGACTCGGGAAACATCAACAGTTCGGTACCAGAGAAAGAATTTCCAACTATGAATTTGCAACCACCGAGTTCAAACTCTCACAATTCCCAGGATAAATCTGAAGGCTTGGTATCTTGCAACATGCCAGTTGACGGAAACTCATATACTCCTTCAATGCATGTGTTGACTAGTAAGAAAGAAACAGATTGTGAAACAGATGAAGTTTTATTGCCTGCTGGAGTCGATGATAAACTTCTATCACCTCCAAACTTAACGTTGCACACTGAGCAGGAGATGTTGGATGAATGTAATTTGAAAACGGACCCTCAATTGCCTGGTGCAACATTTTTGAATGATCAAGCAGTGCTACCATTGTATCCTGCTGCTAGTTATGAAACTCTAATTGGAGAAGGATTCAGAATGACCTCTGAACAGTCACCAATCACTTCAGAAGACTGCACAAGTTTGAAAGATCGTGTTTCTGATGGTGCTAATATCGATGAGAGAAACAGCTTAGCACCAAATTCCTCTTCTGTAGAAGGAGGTATTCTGCCAGGAATTCACATAAATCATAGAAAGGGAATTCTAAAACGAAGCACACGAGGATGCAGAGGAATCTGCAATTGTCTGAACTGTTCCTCTTTTCGTCTTCATGCTGAAAGAGCATTTGAATTTTCTAGAAATCAACTGCAAGATGCTGAAGAAGTTGCTTCAGATTTGATGAAAGAGTTGTCGTATCTTCGCGGTGTCCTGGAAAAGTATTCTGATGTTGCAAAAGGGGATGCTGAATATCATCATTCAAATAAGGTGAAAGAAGCTTGTAGGAAAGCATCTGAAGCAGAGTTAACTGCCAAAGACCGCCTTCAACAAATGAACTATGAGCTTAACATTCATTGCAGAATCACGGTCGAGCCTAATGAAGCATGCTTTGGCCCCAAGGATCAAATTGGGCCTAGGAGGGGGTTGTCGAAGTTAGCCAAATCTGAGGTCGAGCCTAACACGATGGCCACTGAAGCATGCCTTGACATGGGGAGAGAAAGAATGACCCTAACGTAG ATGGAATCAAAGCTTCGCACTATGCCTTCCAAACGCTCCTCCGTTGTTCATCAACCCCGAGCTCTACAAGCTGGATTCCACTTACCTTGCAAAAGACCTAAGACTACTCTCCCCCAACCGCACCCGGAAGAACATGCTTCCAATTTTTTTGCCAAAGATATACGCATCAAGCGAGTATTCTCCCCCAATTTACAGAATCACTCCTCGGTGTCATCCAGAGAGCCGATTAGCGATAGAGAAAGGCTAATAACCGTGAATGGAACTTGTTGGAATGAAGACGGTGGAGTCGGTAATACACATGTTGAATGCGATGAGGGTCGGCGATGTAATGGGAAGAGTGAGGAACCGGTGCACTCTACTCCTCCTGATGTGGATATTCTGACTCGGGGTTTTGTGTCGGCTTCTTCAAGTGGTTGTCCTCGATCAAGTAATGGAGGTGTTTTGGGAGATACTTGTGTGAAATCTGACTGTAGATTTGACTCTGTTGCTAGAACCGGATCGGTGCTCAAACCATGTTCTAAACGAAAGTTATTCAAGGCTCCTGGCTCTATTGCCTACAAAAGATTGCTACCCTTTTTGATGGATAACGACAATTACAAGCTACAAGATGATCCAAACTCAAAAAGTGAGAACAATTTGGTGAAGAAGTTGAATAATGAATCTGATCTGCGTAATCATGTCAAGGGCTCATCTTTTCTTGGTTCAGACACTTGTGTAAAGAATGCAATTTTTGCCTCCGGCATGTCATGTAAGACTACGAAGCTAAATTTACCACCTCCTGATAATGGAGATACTTCGAATTTTCAGAATGGTGGCGGTTTCAACAATAGCCAGAATACAATTAAAGAGGATTCTGGTTTGAAAAAAGATAATGCAGTTTGTGCCTCATCTCTTGACGAAGGGCTGACAGAGCAATCAAAAAATCCCGGGATAGATACGCTTGATAGTGGATCCATTTTTGTATCAGAAGTAGACAATGTTATGTCCCATGTTTCAGAGGATAGTAAAAGAGACGGTCATTTCAATGAACTCAAGATGTCATCATTAAATTCTAACATTGTTGATAGGCCATTGAATGAAGAAAGGAGGGATGGAAAACTTGGTAGTTCTACTGTTGGTGAAAATCATTGTAGCATTGCTACAGCGAGTAACAAGAAAAATGGCGCCTGTGTTAGAAACAAACTGGTTCGCAATCCACTTGTACAACTGAAGTCAAAATACAGCCAATTTTCATTTAGCTATCGAAGGATGCGTCCATTCCTTGAGGATCTCTTCAAAGATAATCCAGAGAACTGTGACTCGGGAAACATCAACAGTTCGGTACCAGAGAAAGAATTTCCAACTATGAATTTGCAACCACCGAGTTCAAACTCTCACAATTCCCAGGATAAATCTGAAGGCTTGGTATCTTGCAACATGCCAGTTGACGGAAACTCATATACTCCTTCAATGCATGTGTTGACTAGTAAGAAAGAAACAGATTGTGAAACAGATGAAGTTTTATTGCCTGCTGGAGTCGATGATAAACTTCTATCACCTCCAAACTTAACGTTGCACACTGAGCAGGAGATGTTGGATGAATGTAATTTGAAAACGGACCCTCAATTGCCTGGTGCAACATTTTTGAATGATCAAGCAGTGCTACCATTGTATCCTGCTGCTAGTTATGAAACTCTAATTGGAGAAGGATTCAGAATGACCTCTGAACAGTCACCAATCACTTCAGAAGACTGCACAAGTTTGAAAGATCGTGTTTCTGATGGTGCTAATATCGATGAGAGAAACAGCTTAGCACCAAATTCCTCTTCTGTAGAAGGAGGTATTCTGCCAGGAATTCACATAAATCATAGAAAGGGAATTCTAAAACGAAGCACACGAGGATGCAGAGGAATCTGCAATTGTCTGAACTGTTCCTCTTTTCGTCTTCATGCTGAAAGAGCATTTGAATTTTCTAGAAATCAACTGCAAGATGCTGAAGAAGTTGCTTCAGATTTGATGAAAGAGTTGTCGTATCTTCGCGGTGTCCTGGAAAAGTATTCTGATGTTGCAAAAGGGGATGCTGAATATCATCATTCAAATAAGGTGAAAGAAGCTTGTAGGAAAGCATCTGAAGCAGAGTTAACTGCCAAAGACCGCCTTCAACAAATGAACTATGAGCTTAACATTCATTGCAGAATCACGGTCGAGCCTAATGAAGCATGCTTTGGCCCCAAGGATCAAATTGGGCCTAGGAGGGGGTTGTCGAAGTTAGCCAAATCTGAGGTCGAGCCTAACACGATGGCCACTGAAGCATGCCTTGACATGGGGAGAGAAAGAATGACCCTAACGTAG
BLAST of CSPI06G08900 vs. TrEMBL
Match: A0A0A0KDW7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G109720 PE=4 SV=1) HSP 1 Score: 1440.2 bits (3727), Expect = 0.0e+00 Identity = 721/727 (99.17%), Postives = 722/727 (99.31%), Query Frame = 1
BLAST of CSPI06G08900 vs. TrEMBL
Match: B9RY12_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1307340 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 9.6e-47 Identity = 201/638 (31.50%), Postives = 296/638 (46.39%), Query Frame = 1
BLAST of CSPI06G08900 vs. TrEMBL
Match: F6I4D0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0062g00260 PE=4 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 2.1e-41 Identity = 149/390 (38.21%), Postives = 214/390 (54.87%), Query Frame = 1
BLAST of CSPI06G08900 vs. TrEMBL
Match: A0A067EPI1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003216mg PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 6.0e-41 Identity = 151/442 (34.16%), Postives = 226/442 (51.13%), Query Frame = 1
BLAST of CSPI06G08900 vs. TrEMBL
Match: A0A0B0P126_GOSAR (Arginine--tRNA ligase OS=Gossypium arboreum GN=F383_07624 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 8.7e-40 Identity = 207/703 (29.45%), Postives = 302/703 (42.96%), Query Frame = 1
BLAST of CSPI06G08900 vs. TAIR10
Match: AT3G23740.1 (AT3G23740.1 unknown protein) HSP 1 Score: 137.9 bits (346), Expect = 2.7e-32 Identity = 123/361 (34.07%), Postives = 180/361 (49.86%), Query Frame = 1
BLAST of CSPI06G08900 vs. NCBI nr
Match: gi|449445692|ref|XP_004140606.1| (PREDICTED: uncharacterized protein LOC101214238 [Cucumis sativus]) HSP 1 Score: 1440.2 bits (3727), Expect = 0.0e+00 Identity = 721/727 (99.17%), Postives = 722/727 (99.31%), Query Frame = 1
BLAST of CSPI06G08900 vs. NCBI nr
Match: gi|659116572|ref|XP_008458140.1| (PREDICTED: uncharacterized protein LOC103497665 [Cucumis melo]) HSP 1 Score: 1232.6 bits (3188), Expect = 0.0e+00 Identity = 634/739 (85.79%), Postives = 661/739 (89.45%), Query Frame = 1
BLAST of CSPI06G08900 vs. NCBI nr
Match: gi|255555188|ref|XP_002518631.1| (PREDICTED: uncharacterized protein LOC8280963 [Ricinus communis]) HSP 1 Score: 196.8 bits (499), Expect = 1.4e-46 Identity = 201/638 (31.50%), Postives = 296/638 (46.39%), Query Frame = 1
BLAST of CSPI06G08900 vs. NCBI nr
Match: gi|658025998|ref|XP_008348417.1| (PREDICTED: uncharacterized protein LOC103411565 isoform X2 [Malus domestica]) HSP 1 Score: 194.5 bits (493), Expect = 6.8e-46 Identity = 137/362 (37.85%), Postives = 198/362 (54.70%), Query Frame = 1
BLAST of CSPI06G08900 vs. NCBI nr
Match: gi|658025996|ref|XP_008348416.1| (PREDICTED: uncharacterized protein LOC103411565 isoform X1 [Malus domestica]) HSP 1 Score: 194.1 bits (492), Expect = 8.9e-46 Identity = 135/358 (37.71%), Postives = 195/358 (54.47%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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