CSPI06G08850 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAGAAAAAAAAGAAAAAGAAAAAAGAGTGTTAAAATTCAATTTTGTTTTTCTCTTTTTAAAACCCCAAAAAGATAATTAATAAACATGAAAATCAGTTTCGTGTCTGTTGCTGCTTCCGAAATTTCTCTGGTCCCTCATTTTGTTTTTGGGAATTTATAGATCCATGATAATTTTTTCATTATTCTGATCGAGTGTTTGGTTAGATTTTCAAATCTGCTGGGATCAAGGGCGACAAAAATGAATACTGGGGATTATATCAATATTCAACCCTCCGAGCTCAAATTCCCATGTGAGTATATCCTCCTTTCCCACTTTCCCCCCTCCTCCTTTTTGTTTCTTCCCAACTTTCTCCTTTTCTTCTCTCCAAAATCTCCTCAAAATGGCAAATTGTTTCTTTTTATGACTTTTTGCACTTGTATAATTGATGAATCCTTTGATGGGAACATTTTTCTTTTCTGGGTTTTCGTCTTTGATTCCTTTCCTCCCTTTATTCTTCAATTTTTACCCTTCTTTTGTTTGTGATCATCATGTTTTGACCTCTTTGGACGTTGAAAAGCATTTTTGGATGATGGGTTTTCGATTTTTTTTTTATTTTTTATTCAGTAATCCTTCAATGTTATGATTCTCCATAGTTGTGTAAGGATAGGATGTTGTCAAAGGAATGACCTGACCGTCTATGTTTAGTTGAGATGTGAAGGGTAATTTTTTTTTTTTTTTTTAGTAAAGAAGAAACGGTTTCATCAAAGAGGGTTGATTGTTGTTAATCACGAATTGCAAACACGAATTGTTGTTCTTAGAAGCAATTGTTTAATATTAGTAATCTGTCTCTACTTTAAGTTTGATCATGACTGCATTTTTTGTCTAATTCTGATTTATGGATGTTTGTTATGTCCTCTTATTTGTGTGTGTTTTCGTTTCTTTCACTTCTGTAAAAATGTAAAAACTTTGCTCGGTGGGTACTTTTCATGTGATGGAATAGTTGAATTGAGGAAGCAAAGTTCTTGTTCCTTGCAATTGACCAACAAAACGGACAAATATGTTGCCTTCAAGGTATGCCTTTTTCTGTTCAGTCTTGGTATGTTAGTTTGGTTTAATCTCGACGGCTATAACTCGGCAACGTACAATTTTTGAGTTCAGTCATCCTAATTTAACAGGTCAAAACCACCAATCCTAAGAAGTACTGCGTTCGTCCTAATGCTGGAATTATTTTGCCTAGTAGTGCAAGCAATATTACAGGTAAAGCCGTCTGCGGAAATAGTTAATTCGTTTTTCTCTATTTATGTAAAAATTATAAACCACACCTTGATTTTCAACTTCATGGTATCCTATCTACTAGATTAGCCTACGTGTTTTATTTTTCTTTTCATTTCTACTTTTGAATGATGCATATTTGATTTGCTGTTGGACTTTTTAGTTACCATGCAAGCTCCTAAGGAGGCACCTCCTGATATGCAATGCAAGGATAAGTTCTTAATTCAAAGTGTTGTAGCACCAGATGGTACAACATCGAAGGACATTAGTGCAGAATTGGTGGGAATGTCTTGTTGCTTCTTCCTTTTGTTATGTAATTTTTTTTATCAATAAAGATGTTATATTGTTGCTTATGTTTTGCATCTATGAAGTGTAGTTTAACAAGGGAGATGGTAAGGTAGTTGATGAGTTTAAGATGAGGGTTGTTTACATTTTTGCAAATCCTCCTTCGCCTGTCCCAGAAGGATCTGAAGAAGGATCTCCTCCAAGGACCACTGGAGTTGATGATGGAAGCCAAAATTTTGCTTTATTTGATGCCGTAAATTTCTTCCTAGAATTCTTTTCTAGATTGTTATTCTTATCCTTTCTTTTTTATCTATGATTGGAGACCAAGAAGTTGCTTTTTCATATTTTAATGGAATTTATTGTTAAACTTCAGGTTTCAAGATCTCTGGAGGAGCCTAAAGAGAAATCATCACAGGTAAGATATTCTTCTCTTGATTCTTATATAAACTTCAGTTTCCATGTATGAGTGTTTCATCTGCTTTATCACTTGAATAAGCTCTCTTTTTTTTATTTAGTTCTTTTACTTTGCACACTATTAAAAATTTTCGGTAACCTTGAAACTTGAATCGAATTTTTCTGACCACTCTTCAAAATGTTCTCTTTTCATTGTTTCTGTGTCCCATTCTAAGTTATATTAATGCCAATTGCCAATGAAGAGCCTGTGCAAAATGCATGGGAATGTGATTTACATTTACTTATGAAGGATTATTAATTCAAGTTGAATGTAGAACAGAAAGAACGGCGAGATATTCTCCTGAATGACCCAATGCGTGGATAAAATACTTTAACTAGAATTAAGGAAAAAATTATGTAGCTACGAACTACAAAATTTTGGGTAGAGCTAGACATAATAGGTGTGAATCTATCTGGGCACTTCCCTCCCTGTTTTCCCCTTTTCCATCATGAAAGAAGGGTAACATTTTCAATGTCTGGAACTTGTTATCCATATAATTGTTCAGAGGAAATTAGCAACTGTAAGGTATGTAATCATTGTTCTTTGGTCTTATGATTATTGGGTTTTTTTTTCAAGTGTGTGATCTTCCGAAGAGAACTTCTAAACAATGTGAAATTACCTTTTTCATTGTGATGGGGTTTGGGTGGGGCTGCGGGTGGGGGCCATTGAGCTATGACTTTATGGTTCTTTTTGTGTTTTTTAGATGGGCTGTGTCACAAGGAACTGTCCTATCCAATTTTGTGTATGTGTCTGTTTTCCTTGCCCAGAAAATAATGCAGGGTATAATATATGGTTGACTACCCTATCCCTTTTCCTGCCAAGCTTTGAATATTTTATCCCCAATTGGGATTATTTGGGGCTATGAGAGCTATTGTTGTTGAGTTTAAAGTTTAACAGTCATGATTAATCTTAAAATGAACACGATGGAGATCTTTGCTATATGTTTGGAAACTTTAGAAGCTTTCAGTTGACTTCCTACCAGAATCTTGAAATGTATAAATCATCACAAAGAAAATTTGTAGATAGGCTTGAAAAAATGTGCAATGAAAATAGCACTCCAGTACATCGTTAGGAGATTTGGCCATGTCTTGAAGAGCAGAATCTAGTACTTCCTTGAGAGATTTGGCTATGTCTTTGAAGATTCTTGCATCTTTTTCATTCCAAAATTTTCATGAATTCATTGGGTGTACCACTGAATTTATTGATGAGATATTATTTGTTATTTCACTCATTTGGGAGCTGTAGCATGTATCTGAAGGGGGCAGCACAATGTGTTTCTGGATAAGTGAATGTTGAAGCTTTTTCTTAGCATTATTTTGGAAAGTAGTGTTCGACAATTTTGATACTTCACGATGAAAATATTAATGCAGGCATGGTCTAACGTTTCTAAGTTGACTGAGGAGAAAGATGCTGCTTTACTAAAGAATCATAAACTACGCCAGGAGCTGGTAATTTCTTTTTAGAATTGCATGTTATTTTCTTTACCTCTAAGCTTCGTGTATCCTACATACTCTGCTTTGATCTATTTCTATAATTGTTTTTGTTTGGGAGGAAGATTTTCTGTGGAAGTAAGAAAATGTGGGAGGATAGTATGTTATATTTGGGTGAATTATGTTGAGGCTATGAGTGAGACTTTTATTGAAATGTTCATTTTATCATCAACACGTTGGTCATGATGATTGGCTAGAGATTTTTGGACAGATCTTGTGGAAATGAACTTTTACAAGTACTACAATCTCTCAATCAAGAATGATCAATTATCTTTTTTATTTTGACACAATAATGCAGAAAATACTATGATGCTTTCTCTTGAATGTAGATTTTTTATTCGAGGGTCGCCGAGCTTAGTCTCAAATAAAGGAAAGAGTTGAATCTTGTGAAGAGATGATCAATTCTTGAAGTCTTCTAGTCTTTGTATTCTTCAAGTCTTCATAAATTTTCAAAGCTATATAGTCTTCAATCACTTGGGAGTTCTCTCTCAAGTCTAGAATTTTGGGTGCAAAAAATGAAGGGTGATCTCCAATATGTATGATCTTTACATGGGCTTGGTTGATATTGGACTCAATCTCTCAGTTTGGACTCATTTGAGCCTGACCCTTTTATATCAGATATATAAGCTGTATGGTTCCTAAGGAATCATAAAATCTCCTCGTTTTTTAGTTTTTCTATGGAGTTCATTCTTTTTGTTTTCCTTTTTTCGTTTATACTTAAGGTTCTTTTTTAATAAACTCCAATTGGTGGAAATATTTAGAATCCCTTTGGGTTTATTGGATTGCTTCCTTGTTACCCTTTGCATTTTTGGGGTTTCTCGATGAAAGTTACTTTTCCAGAAAAAGGCAATCCATCTTATTTTGCTTGGTTATGAGGTTACCTTAAAAAGGACCTAACTATCTTACCATTTACAATCATTTTGCATAAGATTTCAAAGCACAAGCAAATGGATTTAACATGTCTCAAACACGTGTTTCATGTTTACCAATAATTTTTATCAGGTTTAAATTGTGTCATCAAGTGTGGTATCTTACACATGTATACCAGATTTTCAAGTTTTATAGTACGTTGGGTTAATAAATTGGCAACTCCTTCACGTTACACATCTGTAATTCTGCAATATGTTGTGGTGCATATTTGGTTATGGTTGATATTTACTTCTTATTTTTTACCATCGAATCTGTTTTCCTGGCTTACGATGAAACTTGCAGTTGATCGATATCTGCAAGTGAATCTATCTTTGTGTATATGCTTTTTCTCACTTTTCAATAAGTGTCTGGACTTGCTAAACAAAATCAGCTAATGTTAATCTTATCTCGTTGCTCAAGTTATGCTTTTTTTTTTATATATTTTCTTGCAGGAACTTCTGAGGAAAGAAGCAAGCGGAAGGCAGGGTGGCGGTTTCTCTGTATTGTTTGTGGTGCTAGTCGGTCTCATTGGAGTTCTGATTGGTTACTTGGTGAAGAAAACATAGAAAACTCAGACATTCCATTTTTTTTAAATTTTGTTTGATGCATTTTGCTGTTATTATCTGTGTTCTGTCCAGAATTAACAACCTTAAAATGTTTAGCGCATCAAGAAGACAGCTTTTGATGTCTTGTCATTGTTCTAGATTGACCCTGGATTGTTTTTTGAGAAATACTTGTTCAATGGATTCGTTTTAGCTGCTTGCTTGCTCTCTTGGTTC ATGAATACTGGGGATTATATCAATATTCAACCCTCCGAGCTCAAATTCCCATTTGAATTGAGGAAGCAAAGTTCTTGTTCCTTGCAATTGACCAACAAAACGGACAAATATGTTGCCTTCAAGGTCAAAACCACCAATCCTAAGAAGTACTGCGTTCGTCCTAATGCTGGAATTATTTTGCCTAGTAGTGCAAGCAATATTACAGTTACCATGCAAGCTCCTAAGGAGGCACCTCCTGATATGCAATGCAAGGATAAGTTCTTAATTCAAAGTGTTGTAGCACCAGATGGTACAACATCGAAGGACATTAGTGCAGAATTGTTTAACAAGGGAGATGGTAAGGTAGTTGATGAGTTTAAGATGAGGGTTGTTTACATTTTTGCAAATCCTCCTTCGCCTGTCCCAGAAGGATCTGAAGAAGGATCTCCTCCAAGGACCACTGGAGTTGATGATGGAAGCCAAAATTTTGCTTTATTTGATGCCGTTTCAAGATCTCTGGAGGAGCCTAAAGAGAAATCATCACAGGCATGGTCTAACGTTTCTAAGTTGACTGAGGAGAAAGATGCTGCTTTACTAAAGAATCATAAACTACGCCAGGAGCTGGAACTTCTGAGGAAAGAAGCAAGCGGAAGGCAGGGTGGCGGTTTCTCTGTATTGTTTGTGGTGCTAGTCGGTCTCATTGGAGTTCTGATTGGTTACTTGGTGAAGAAAACATAG ATGAATACTGGGGATTATATCAATATTCAACCCTCCGAGCTCAAATTCCCATTTGAATTGAGGAAGCAAAGTTCTTGTTCCTTGCAATTGACCAACAAAACGGACAAATATGTTGCCTTCAAGGTCAAAACCACCAATCCTAAGAAGTACTGCGTTCGTCCTAATGCTGGAATTATTTTGCCTAGTAGTGCAAGCAATATTACAGTTACCATGCAAGCTCCTAAGGAGGCACCTCCTGATATGCAATGCAAGGATAAGTTCTTAATTCAAAGTGTTGTAGCACCAGATGGTACAACATCGAAGGACATTAGTGCAGAATTGTTTAACAAGGGAGATGGTAAGGTAGTTGATGAGTTTAAGATGAGGGTTGTTTACATTTTTGCAAATCCTCCTTCGCCTGTCCCAGAAGGATCTGAAGAAGGATCTCCTCCAAGGACCACTGGAGTTGATGATGGAAGCCAAAATTTTGCTTTATTTGATGCCGTTTCAAGATCTCTGGAGGAGCCTAAAGAGAAATCATCACAGGCATGGTCTAACGTTTCTAAGTTGACTGAGGAGAAAGATGCTGCTTTACTAAAGAATCATAAACTACGCCAGGAGCTGGAACTTCTGAGGAAAGAAGCAAGCGGAAGGCAGGGTGGCGGTTTCTCTGTATTGTTTGTGGTGCTAGTCGGTCTCATTGGAGTTCTGATTGGTTACTTGGTGAAGAAAACATAG
BLAST of CSPI06G08850 vs. Swiss-Prot
Match: VAP13_ARATH (Vesicle-associated protein 1-3 OS=Arabidopsis thaliana GN=PVA13 PE=2 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 5.7e-84 Identity = 156/238 (65.55%), Postives = 195/238 (81.93%), Query Frame = 1
BLAST of CSPI06G08850 vs. Swiss-Prot
Match: VAP12_ARATH (Vesicle-associated protein 1-2 OS=Arabidopsis thaliana GN=PVA12 PE=1 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 1.0e-64 Identity = 128/238 (53.78%), Postives = 176/238 (73.95%), Query Frame = 1
BLAST of CSPI06G08850 vs. Swiss-Prot
Match: VAP11_ARATH (Vesicle-associated protein 1-1 OS=Arabidopsis thaliana GN=PVA11 PE=1 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 6.5e-64 Identity = 124/240 (51.67%), Postives = 175/240 (72.92%), Query Frame = 1
BLAST of CSPI06G08850 vs. Swiss-Prot
Match: VAP21_ARATH (Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21 PE=1 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 9.8e-44 Identity = 105/233 (45.06%), Postives = 142/233 (60.94%), Query Frame = 1
BLAST of CSPI06G08850 vs. Swiss-Prot
Match: VAP14_ARATH (Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14 PE=2 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.1e-39 Identity = 89/184 (48.37%), Postives = 121/184 (65.76%), Query Frame = 1
BLAST of CSPI06G08850 vs. TrEMBL
Match: A0A0A0KDW5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G109670 PE=4 SV=1) HSP 1 Score: 466.5 bits (1199), Expect = 2.0e-128 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1
BLAST of CSPI06G08850 vs. TrEMBL
Match: M5X0A2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010720mg PE=4 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 1.8e-97 Identity = 178/238 (74.79%), Postives = 211/238 (88.66%), Query Frame = 1
BLAST of CSPI06G08850 vs. TrEMBL
Match: A0A061DU81_THECC (Plant VAMP (Vesicle-associated membrane protein) family protein isoform 1 OS=Theobroma cacao GN=TCM_005557 PE=4 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 2.5e-94 Identity = 170/237 (71.73%), Postives = 211/237 (89.03%), Query Frame = 1
BLAST of CSPI06G08850 vs. TrEMBL
Match: B9RD79_RICCO (Vesicle-associated membrane protein, putative OS=Ricinus communis GN=RCOM_1610730 PE=4 SV=1) HSP 1 Score: 348.6 bits (893), Expect = 6.1e-93 Identity = 168/238 (70.59%), Postives = 206/238 (86.55%), Query Frame = 1
BLAST of CSPI06G08850 vs. TrEMBL
Match: V4TY67_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021988mg PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 5.1e-92 Identity = 170/238 (71.43%), Postives = 203/238 (85.29%), Query Frame = 1
BLAST of CSPI06G08850 vs. TAIR10
Match: AT4G00170.1 (AT4G00170.1 Plant VAMP (vesicle-associated membrane protein) family protein) HSP 1 Score: 312.0 bits (798), Expect = 3.2e-85 Identity = 156/238 (65.55%), Postives = 195/238 (81.93%), Query Frame = 1
BLAST of CSPI06G08850 vs. TAIR10
Match: AT2G45140.1 (AT2G45140.1 plant VAP homolog 12) HSP 1 Score: 248.1 bits (632), Expect = 5.7e-66 Identity = 128/238 (53.78%), Postives = 176/238 (73.95%), Query Frame = 1
BLAST of CSPI06G08850 vs. TAIR10
Match: AT3G60600.1 (AT3G60600.1 vesicle associated protein) HSP 1 Score: 245.4 bits (625), Expect = 3.7e-65 Identity = 124/240 (51.67%), Postives = 175/240 (72.92%), Query Frame = 1
BLAST of CSPI06G08850 vs. TAIR10
Match: AT5G47180.1 (AT5G47180.1 Plant VAMP (vesicle-associated membrane protein) family protein) HSP 1 Score: 178.3 bits (451), Expect = 5.5e-45 Identity = 105/233 (45.06%), Postives = 142/233 (60.94%), Query Frame = 1
BLAST of CSPI06G08850 vs. TAIR10
Match: AT1G51270.3 (AT1G51270.3 structural molecules;transmembrane receptors;structural molecules) HSP 1 Score: 164.9 bits (416), Expect = 6.3e-41 Identity = 89/184 (48.37%), Postives = 121/184 (65.76%), Query Frame = 1
BLAST of CSPI06G08850 vs. NCBI nr
Match: gi|449445449|ref|XP_004140485.1| (PREDICTED: vesicle-associated protein 1-3 [Cucumis sativus]) HSP 1 Score: 466.5 bits (1199), Expect = 2.9e-128 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1
BLAST of CSPI06G08850 vs. NCBI nr
Match: gi|659116566|ref|XP_008458137.1| (PREDICTED: vesicle-associated protein 1-3 [Cucumis melo]) HSP 1 Score: 465.3 bits (1196), Expect = 6.4e-128 Identity = 237/238 (99.58%), Postives = 238/238 (100.00%), Query Frame = 1
BLAST of CSPI06G08850 vs. NCBI nr
Match: gi|470142506|ref|XP_004306946.1| (PREDICTED: vesicle-associated protein 1-3 isoform X1 [Fragaria vesca subsp. vesca]) HSP 1 Score: 367.1 bits (941), Expect = 2.4e-98 Identity = 181/238 (76.05%), Postives = 213/238 (89.50%), Query Frame = 1
BLAST of CSPI06G08850 vs. NCBI nr
Match: gi|596004199|ref|XP_007218293.1| (hypothetical protein PRUPE_ppa010720mg [Prunus persica]) HSP 1 Score: 363.6 bits (932), Expect = 2.6e-97 Identity = 178/238 (74.79%), Postives = 211/238 (88.66%), Query Frame = 1
BLAST of CSPI06G08850 vs. NCBI nr
Match: gi|698493616|ref|XP_009793078.1| (PREDICTED: vesicle-associated protein 1-3 isoform X1 [Nicotiana sylvestris]) HSP 1 Score: 355.5 bits (911), Expect = 7.1e-95 Identity = 176/240 (73.33%), Postives = 212/240 (88.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |