CSPI06G08810 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G08810
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 7400390 .. 7400563 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGTGAGAGAGGGGAGGATGAGTTTATTAAAATGGAATGGGAGGGAAGAGGAAGAGGAAGAGGAAGAAGGGCATCGGAGGGTGAGGAATGGGTGTGATCTGATACAAGAGGACGTGGACGTTTCAGATGGAGAGGACAGAGGAGGTGGTGGTGGTCAAAGGTCAAAGTGA

mRNA sequence

ATGTTTGTGAGAGAGGGGAGGATGAGTTTATTAAAATGGAATGGGAGGGAAGAGGAAGAGGAAGAGGAAGAAGGGCATCGGAGGGTGAGGAATGGGTGTGATCTGATACAAGAGGACGTGGACGTTTCAGATGGAGAGGACAGAGGAGGTGGTGGTGGTCAAAGGTCAAAGTGA

Coding sequence (CDS)

ATGTTTGTGAGAGAGGGGAGGATGAGTTTATTAAAATGGAATGGGAGGGAAGAGGAAGAGGAAGAGGAAGAAGGGCATCGGAGGGTGAGGAATGGGTGTGATCTGATACAAGAGGACGTGGACGTTTCAGATGGAGAGGACAGAGGAGGTGGTGGTGGTCAAAGGTCAAAGTGA
Homology
[Close]
BLAST of CSPI06G08810 vs. TrEMBL
Match: A0A0A0KDW2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G109630 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 8.8e-22
Identity = 54/57 (94.74%), Postives = 56/57 (98.25%), Query Frame = 1 

Query: 1  MFVREGRMSLLKWNGREEEEEEEEGHRRVRNGCDLIQEDVDVSDGEDRGGGGGQRSK 58
          MFVREG +SLLKWNGREEEEEEEEGHRRVRNGCDLIQEDV+VSDGEDRGGGGGQRSK
Sbjct: 1  MFVREGSISLLKWNGREEEEEEEEGHRRVRNGCDLIQEDVEVSDGEDRGGGGGQRSK 57

[Close]
BLAST of CSPI06G08810 vs. NCBI nr
Match: gi|700191363|gb|KGN46567.1| (hypothetical protein Csa_6G109630 [Cucumis sativus])

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-21
Identity = 54/57 (94.74%), Postives = 56/57 (98.25%), Query Frame = 1 

Query: 1  MFVREGRMSLLKWNGREEEEEEEEGHRRVRNGCDLIQEDVDVSDGEDRGGGGGQRSK 58
          MFVREG +SLLKWNGREEEEEEEEGHRRVRNGCDLIQEDV+VSDGEDRGGGGGQRSK
Sbjct: 1  MFVREGSISLLKWNGREEEEEEEEGHRRVRNGCDLIQEDVEVSDGEDRGGGGGQRSK 57

The following BLAST results are available for this feature:
BLAST of CSPI06G08810 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI06G08810 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDW2_CUCSA8.8e-2294.74Uncharacterized protein OS=Cucumis sativus GN=Csa_6G109630 PE=4 SV=1[more]
BLAST of CSPI06G08810 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI06G08810 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191363|gb|KGN46567.1|1.3e-2194.74hypothetical protein Csa_6G109630 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G08810.1CSPI06G08810.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G08810CsaV3_6G009160Cucumber (Chinese Long) v3cpicucB364
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G08810Wax gourdcpiwgoB549
CSPI06G08810Cucumber (Gy14) v1cgycpiB156
CSPI06G08810Cucurbita maxima (Rimu)cmacpiB383
CSPI06G08810Cucurbita maxima (Rimu)cmacpiB918
CSPI06G08810Cucurbita moschata (Rifu)cmocpiB372
CSPI06G08810Cucurbita moschata (Rifu)cmocpiB898
CSPI06G08810Cucumber (Chinese Long) v2cpicuB314
CSPI06G08810Melon (DHL92) v3.5.1cpimeB436
CSPI06G08810Watermelon (Charleston Gray)cpiwcgB503
CSPI06G08810Watermelon (97103) v1cpiwmB563
CSPI06G08810Cucurbita pepo (Zucchini)cpecpiB154
CSPI06G08810Cucurbita pepo (Zucchini)cpecpiB329
CSPI06G08810Bottle gourd (USVL1VR-Ls)cpilsiB404
CSPI06G08810Melon (DHL92) v3.6.1cpimedB435
CSPI06G08810Cucumber (Gy14) v2cgybcpiB288
CSPI06G08810Silver-seed gourdcarcpiB0593
CSPI06G08810Silver-seed gourdcarcpiB0637
CSPI06G08810Watermelon (97103) v2cpiwmbB495