CSPI06G08770 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGCTCGCTCATCGTGTTGCTTCCAGTAGAGTTTGGACATTTTTGGTATGAAAAGAAACTTTAGAAGGTTATGGAATTAAATTATTGATGTGCAATAAGTTATAACAAAGATGTTCCTATCTAATTATTTTTTGTAGACTAATTATTGCACAAACTTCCAAATATATTACAAACCCAAGTTTTGGTGGATGAATATTCTTGAGTTGATTTGAGTTTGAGTTAAATGGGGTGTTTTTTTAGACTAATTTTAAAATTTTAGTGTATGCTTATAATTCTACCGTATTATATGTACTTGAATCTCTTAAATCTATTATATTATTTGTTCGAACAATGATCAAGAACCAAAATAGGATTGTTGAACCTAATTTGTATGTTATTTTCAGTCTTTGTGATTTTAGTTGTATGGTTGAAAGAAATGTGTTATATATTTTCTTTAATCTGATGTTTTTTCTATAACAATGAAGTGCTCAATTTTTTGTTTTTTGAAGTGGCCGCCACTCAAGATGCTACAAATGACACAAGTGGATACCTTACTCAAACCTTGAGTCTCCCTTATACTAATGAAGTAACTACTACTTGGAACAATACACTTGAGATGAAACTTGGTTTTGGATTAGAATTTAGTGGTGGGATTCCATTAATTACATCTGCAGGCATTATTGTTTCTGGAGAGATTTCGGGATCCTATTCTTGGGGAAAAACTTTGACCAAGAAGACGTCCAAAGAGTCGTCGTACGAAACCATCATGCCACCGAATACTTACGTGAAAGTGAGTTTGATAGCTACCAAGGGTAAGTGTGACATCCCCTTCTCGTACATGCAACGAGATGTTTACTGCGATGGAGCTGTGAAGACTGAAGAACGTGATGATGGGATATACACTGGCCTTAATTGCTACAGTTACAATTATGAAGTTGAAGAGAAGAAGATTTGA ATGACGCTCGCTCATCGTGTTGCTTCCATGGCCGCCACTCAAGATGCTACAAATGACACAAGTGGATACCTTACTCAAACCTTGAGTCTCCCTTATACTAATGAAGTAACTACTACTTGGAACAATACACTTGAGATGAAACTTGGTTTTGGATTAGAATTTAGTGGTGGGATTCCATTAATTACATCTGCAGGCATTATTGTTTCTGGAGAGATTTCGGGATCCTATTCTTGGGGAAAAACTTTGACCAAGAAGACGTCCAAAGAGTCGTCGTACGAAACCATCATGCCACCGAATACTTACGTGAAAGTGAGTTTGATAGCTACCAAGGGTAAGTGTGACATCCCCTTCTCGTACATGCAACGAGATGTTTACTGCGATGGAGCTGTGAAGACTGAAGAACGTGATGATGGGATATACACTGGCCTTAATTGCTACAGTTACAATTATGAAGTTGAAGAGAAGAAGATTTGA ATGACGCTCGCTCATCGTGTTGCTTCCATGGCCGCCACTCAAGATGCTACAAATGACACAAGTGGATACCTTACTCAAACCTTGAGTCTCCCTTATACTAATGAAGTAACTACTACTTGGAACAATACACTTGAGATGAAACTTGGTTTTGGATTAGAATTTAGTGGTGGGATTCCATTAATTACATCTGCAGGCATTATTGTTTCTGGAGAGATTTCGGGATCCTATTCTTGGGGAAAAACTTTGACCAAGAAGACGTCCAAAGAGTCGTCGTACGAAACCATCATGCCACCGAATACTTACGTGAAAGTGAGTTTGATAGCTACCAAGGGTAAGTGTGACATCCCCTTCTCGTACATGCAACGAGATGTTTACTGCGATGGAGCTGTGAAGACTGAAGAACGTGATGATGGGATATACACTGGCCTTAATTGCTACAGTTACAATTATGAAGTTGAAGAGAAGAAGATTTGA
BLAST of CSPI06G08770 vs. TrEMBL
Match: A0A0A0KCL3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108620 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 1.0e-56 Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 1
BLAST of CSPI06G08770 vs. TrEMBL
Match: A0A0D9XU75_9ORYZ (Uncharacterized protein OS=Leersia perrieri PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 1.7e-27 Identity = 66/150 (44.00%), Postives = 87/150 (58.00%), Query Frame = 1
BLAST of CSPI06G08770 vs. TrEMBL
Match: F6HZZ6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06090 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 3.8e-27 Identity = 58/145 (40.00%), Postives = 87/145 (60.00%), Query Frame = 1
BLAST of CSPI06G08770 vs. TrEMBL
Match: M0UVK0_HORVD (Uncharacterized protein OS=Hordeum vulgare var. distichum PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.5e-26 Identity = 65/147 (44.22%), Postives = 88/147 (59.86%), Query Frame = 1
BLAST of CSPI06G08770 vs. TrEMBL
Match: M0UVJ8_HORVD (Uncharacterized protein OS=Hordeum vulgare var. distichum PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.5e-26 Identity = 65/147 (44.22%), Postives = 88/147 (59.86%), Query Frame = 1
BLAST of CSPI06G08770 vs. NCBI nr
Match: gi|659117569|ref|XP_008458670.1| (PREDICTED: uncharacterized protein LOC103497999 [Cucumis melo]) HSP 1 Score: 267.7 bits (683), Expect = 1.3e-68 Identity = 131/148 (88.51%), Postives = 139/148 (93.92%), Query Frame = 1
BLAST of CSPI06G08770 vs. NCBI nr
Match: gi|700191360|gb|KGN46564.1| (hypothetical protein Csa_6G108620 [Cucumis sativus]) HSP 1 Score: 227.6 bits (579), Expect = 1.5e-56 Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 1
BLAST of CSPI06G08770 vs. NCBI nr
Match: gi|659117567|ref|XP_008458669.1| (PREDICTED: uncharacterized protein LOC103497997 [Cucumis melo]) HSP 1 Score: 136.0 bits (341), Expect = 5.9e-29 Identity = 63/141 (44.68%), Postives = 88/141 (62.41%), Query Frame = 1
BLAST of CSPI06G08770 vs. NCBI nr
Match: gi|645281008|ref|XP_008245436.1| (PREDICTED: uncharacterized protein LOC103343557 [Prunus mume]) HSP 1 Score: 132.9 bits (333), Expect = 5.0e-28 Identity = 65/154 (42.21%), Postives = 96/154 (62.34%), Query Frame = 1
BLAST of CSPI06G08770 vs. NCBI nr
Match: gi|225465425|ref|XP_002264858.1| (PREDICTED: uncharacterized protein LOC100241465 [Vitis vinifera]) HSP 1 Score: 129.4 bits (324), Expect = 5.5e-27 Identity = 58/145 (40.00%), Postives = 87/145 (60.00%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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