CSPI06G06660 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G06660
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Hfr-2-like protein
Location	Chr6 : 5751747 .. 5753326 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAAGAAAGAAAGGAAGAAAAGAAAGGATGAATCTTTCCAGAGGACGTAGGAAAGCTGGGACTGACAATTTGGAAGGAGCAGATGAAGCAGAGAAGAAGTTGATGAAGAGCGATTATAAGGATGGTTTGATGTTGAACCAAGGACAAGTGATAGAAGATGAAAAATTAAAAAAGGTAATCCCCAAGAATCTCTTCCTCAAATCCATCCGCAATGGCAAATATCTTCGCTACATAAGCGAAAGTGAAAACGCGGACGGGCTTCTTCAATACTCCAGCAAGAACATGGTTGGACCGTATTCGAAATTTGTCCTTCATGGATCGAAAACCAAGCCAGGTTTCTTCCATATAAGATGTTGTTACAACAACAAATTCTGGGTTCGTTTATCCGAAGACTCGAACTACATTGCAGCCAAAGCCAATGAAGAAGAGGATGATACATCGAAATGGTCGTGCACTTTGTTCGAACCAATAATTTTTGCACCTGATAGAACCGAGCTCTACTACATCCGTCATGTTCAACTCAACACCTTCCTGTTCATGGCCGAAGGAGATCCTTCACCTTACAACGATTGTTTAGTTGCAAGAGAAGAAGACATGAGAACCACTGACAAGGATCTTGTCCTCTCGGTCGTGACGGATTGGGACTCCATATTTGTACTACCAAAATACATAGCTTTCAAAAGCAACAACGATCGATATCTCAAACCATATAGAAAATACCTCAAATTCTCAGCTTCTAGCGTGGAAGATCCAGTCGTTGTGTTTGAGATAATACCCATGCAAGATGGATACGTTCGTATAAAACATGTGAGTTCAGGTAAGTATTGGATTCTAGATCCGAATTGGATATGTTGTGAATCAATTGACATCAACAGAGACGACCCCAACACTTTGTTTTTTCCTGTAAAAGTGGATAACAATATCGTGGCTTTTCGCAATAAAGAGAACGACCGTTTTTGCAAGAGTTTGACAATAGACGGGAAGACGAATTGCCTTAATGCCGCGACGAAACAATAACGGAGGATGCACGTTTGGAGGTAAAGGAGATTATTGTAGCAAGAAGCGTAGAAGATGTGGAGTATCGTGTTAAAGATGCAAGGGTTTATGGGAAGAAAATTCACAGTGTGTCCAAAGGGGTTGCTATTAACAATACTAAAGTTGATGATAAAGTAAGTATGAAGTTTAGCTATGAGAGGGTGGTGGAAAGAACATGGAGTTCATCCATGTCGTCGACTTTCGGAATTGCTACTAGGTTTAATGCAATGATTCCGGGGGTTGGGAGGATGAAGTTTGAGCTTTCGATGGAGGCTTCAAGTGCAAACGCGAGGCAAGAAACAGAGAAGGAAAAATCAATGGTGGAGACGGAAGAGACAATAACGATACCGGCAATGTCAAAGGTGAAGTTTAGTGCAGTGGTAACACATGCTTATTGTGATGTTCCTTTTTCGTATACTCGAAGGGACACTTTGAAAGATGGGAGACAAGTGACACATCGTTTCGAAGATGGGCTTTACACAGGTGTTACAACTTATGACTATAAGTTCGAGACTGAAAAAGTAGAATCATATTCTGATTAA

mRNA sequence

ATGAATCTTTCCAGAGGACGTAGGAAAGCTGGGACTGACAATTTGGAAGGAGCAGATGAAGCAGAGAAGAAGTTGATGAAGAGCGATTATAAGGATGGTTTGATGTTGAACCAAGGACAAGTGATAGAAGATGAAAAATTAAAAAAGGTAATCCCCAAGAATCTCTTCCTCAAATCCATCCGCAATGGCAAATATCTTCGCTACATAAGCGAAAGTGAAAACGCGGACGGGCTTCTTCAATACTCCAGCAAGAACATGGTTGGACCGTATTCGAAATTTGTCCTTCATGGATCGAAAACCAAGCCAGGTTTCTTCCATATAAGATGTTGTTACAACAACAAATTCTGGGTTCGTTTATCCGAAGACTCGAACTACATTGCAGCCAAAGCCAATGAAGAAGAGGATGATACATCGAAATGGTCGTGCACTTTGTTCGAACCAATAATTTTTGCACCTGATAGAACCGAGCTCTACTACATCCGTCATGTTCAACTCAACACCTTCCTGTTCATGGCCGAAGGAGATCCTTCACCTTACAACGATTGTTTAGTTGCAAGAGAAGAAGACATGAGAACCACTGACAAGGATCTTGTCCTCTCGGTCGTGACGGATTGGGACTCCATATTTGTACTACCAAAATACATAGCTTTCAAAAGCAACAACGATCGATATCTCAAACCATATAGAAAATACCTCAAATTCTCAGCTTCTAGCGTGGAAGATCCAGTCGTTGTGTTTGAGATAATACCCATGCAAGATGGATACGTTCGTATAAAACATGTGAGTTCAGGTAAGTATTGGATTCTAGATCCGAATTGGATATGTTGTGAATCAATTGACATCAACAGAGACGACCCCAACACTTTGTTTTTTCCTGTAAAGGAGATTATTGTAGCAAGAAGCGTAGAAGATGTGGAGTATCGTGTTAAAGATGCAAGGGTTTATGGGAAGAAAATTCACAGTGTGTCCAAAGGGGTTGCTATTAACAATACTAAAGTTGATGATAAAGTAAGTATGAAGTTTAGCTATGAGAGGGTGGTGGAAAGAACATGGAGTTCATCCATGTCGTCGACTTTCGGAATTGCTACTAGGTTTAATGCAATGATTCCGGGGGTTGGGAGGATGAAGTTTGAGCTTTCGATGGAGGCTTCAAGTGCAAACGCGAGGCAAGAAACAGAGAAGGAAAAATCAATGGTGGAGACGGAAGAGACAATAACGATACCGGCAATGTCAAAGGTGAAGTTTAGTGCAGTGGTAACACATGCTTATTGTGATGTTCCTTTTTCGTATACTCGAAGGGACACTTTGAAAGATGGGAGACAAGTGACACATCGTTTCGAAGATGGGCTTTACACAGGTGTTACAACTTATGACTATAAGTTCGAGACTGAAAAAGTAGAATCATATTCTGATTAA

Coding sequence (CDS)

ATGAATCTTTCCAGAGGACGTAGGAAAGCTGGGACTGACAATTTGGAAGGAGCAGATGAAGCAGAGAAGAAGTTGATGAAGAGCGATTATAAGGATGGTTTGATGTTGAACCAAGGACAAGTGATAGAAGATGAAAAATTAAAAAAGGTAATCCCCAAGAATCTCTTCCTCAAATCCATCCGCAATGGCAAATATCTTCGCTACATAAGCGAAAGTGAAAACGCGGACGGGCTTCTTCAATACTCCAGCAAGAACATGGTTGGACCGTATTCGAAATTTGTCCTTCATGGATCGAAAACCAAGCCAGGTTTCTTCCATATAAGATGTTGTTACAACAACAAATTCTGGGTTCGTTTATCCGAAGACTCGAACTACATTGCAGCCAAAGCCAATGAAGAAGAGGATGATACATCGAAATGGTCGTGCACTTTGTTCGAACCAATAATTTTTGCACCTGATAGAACCGAGCTCTACTACATCCGTCATGTTCAACTCAACACCTTCCTGTTCATGGCCGAAGGAGATCCTTCACCTTACAACGATTGTTTAGTTGCAAGAGAAGAAGACATGAGAACCACTGACAAGGATCTTGTCCTCTCGGTCGTGACGGATTGGGACTCCATATTTGTACTACCAAAATACATAGCTTTCAAAAGCAACAACGATCGATATCTCAAACCATATAGAAAATACCTCAAATTCTCAGCTTCTAGCGTGGAAGATCCAGTCGTTGTGTTTGAGATAATACCCATGCAAGATGGATACGTTCGTATAAAACATGTGAGTTCAGGTAAGTATTGGATTCTAGATCCGAATTGGATATGTTGTGAATCAATTGACATCAACAGAGACGACCCCAACACTTTGTTTTTTCCTGTAAAGGAGATTATTGTAGCAAGAAGCGTAGAAGATGTGGAGTATCGTGTTAAAGATGCAAGGGTTTATGGGAAGAAAATTCACAGTGTGTCCAAAGGGGTTGCTATTAACAATACTAAAGTTGATGATAAAGTAAGTATGAAGTTTAGCTATGAGAGGGTGGTGGAAAGAACATGGAGTTCATCCATGTCGTCGACTTTCGGAATTGCTACTAGGTTTAATGCAATGATTCCGGGGGTTGGGAGGATGAAGTTTGAGCTTTCGATGGAGGCTTCAAGTGCAAACGCGAGGCAAGAAACAGAGAAGGAAAAATCAATGGTGGAGACGGAAGAGACAATAACGATACCGGCAATGTCAAAGGTGAAGTTTAGTGCAGTGGTAACACATGCTTATTGTGATGTTCCTTTTTCGTATACTCGAAGGGACACTTTGAAAGATGGGAGACAAGTGACACATCGTTTCGAAGATGGGCTTTACACAGGTGTTACAACTTATGACTATAAGTTCGAGACTGAAAAAGTAGAATCATATTCTGATTAA

Homology

[Close]

BLAST of CSPI06G06660 vs. TrEMBL
Match: A0A0A0KA25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G086140 PE=4 SV=1)

HSP 1 Score: 927.2 bits (2395), Expect = 8.2e-267
Identity = 459/471 (97.45%), Postives = 464/471 (98.51%), Query Frame = 1


Query: 1   MNLSRGRRKAGTDNLEGADEAEKKLMKSDYKDGLMLNQGQVIEDEKLKKVIPKNLFLKSI 60
           MNLSRGRRKAGTDNLEGADEAEKKLMKSDYKDGLMLNQGQVIEDEKLKKVIPKNLFLKSI
Sbjct: 1   MNLSRGRRKAGTDNLEGADEAEKKLMKSDYKDGLMLNQGQVIEDEKLKKVIPKNLFLKSI 60

Query: 61  RNGKYLRYISESENADGLLQYSSKNMVGPYSKFVLHGSKTKPGFFHIRCCYNNKFWVRLS 120
           RNGKYLRYIS+ ENADGLLQYSSKNMVGPYSKFVLHGSKTKPGFFHIRCCYNNKFWVRLS
Sbjct: 61  RNGKYLRYISKGENADGLLQYSSKNMVGPYSKFVLHGSKTKPGFFHIRCCYNNKFWVRLS 120

Query: 121 EDSNYIAAKANEEEDDTSKWSCTLFEPIIFAPDRTELYYIRHVQLNTFLFMAEGDPSPYN 180
           EDSNYIAAKANEEEDDTSKWSCTLFEPIIFAPDRTELYYIRHVQLNTFLFMAEGDPSPYN
Sbjct: 121 EDSNYIAAKANEEEDDTSKWSCTLFEPIIFAPDRTELYYIRHVQLNTFLFMAEGDPSPYN 180

Query: 181 DCLVAREEDMRTTDKDLVLSVVTDWDSIFVLPKYIAFKSNNDRYLKPYRKYLKFSASSVE 240
           DCLVAREEDMRTTDKDLVLSVVTDWDSIFVLPKYIAFKSNNDRYL+PYRKYLKFSASSVE
Sbjct: 181 DCLVAREEDMRTTDKDLVLSVVTDWDSIFVLPKYIAFKSNNDRYLEPYRKYLKFSASSVE 240

Query: 241 DPVVVFEIIPMQDGYVRIKHVSSGKYWILDPNWICCESIDINRDDPNTLFFPVKEIIVAR 300
           DPV+VFEIIPMQDGYVRIKHVSSGKYWILDPNWICCESIDINRDDPNTLF PVK     R
Sbjct: 241 DPVIVFEIIPMQDGYVRIKHVSSGKYWILDPNWICCESIDINRDDPNTLFLPVKVDNNIR 300

Query: 301 SVEDVEYRVKDARVYGKKIHSVSKGVAINNTKVDDKVSMKFSYERVVERTWSSSMSSTFG 360
           SVEDVEYRVKDARVYGKKIHSVSKGVAINNTKVDDKVSMKFSYERVVERTWSSSMSSTFG
Sbjct: 301 SVEDVEYRVKDARVYGKKIHSVSKGVAINNTKVDDKVSMKFSYERVVERTWSSSMSSTFG 360

Query: 361 IATRFNAMIPGVGRMKFELSMEASSANARQETEKEKSMVETEETITIPAMSKVKFSAVVT 420
           IATRFNAMIPGVGRMKFELSMEASSA+ARQETEKEKSMVETEETITIPAMSKVKFSAVVT
Sbjct: 361 IATRFNAMIPGVGRMKFELSMEASSASARQETEKEKSMVETEETITIPAMSKVKFSAVVT 420

Query: 421 HAYCDVPFSYTRRDTLKDGRQVTHRFEDGLYTGVTTYDYKFETEKVESYSD 472
           HAYCDVPFSYTRRDTLKDGRQVTHRFEDGL+TGVTTYDYKFETEKVESYSD
Sbjct: 421 HAYCDVPFSYTRRDTLKDGRQVTHRFEDGLFTGVTTYDYKFETEKVESYSD 471

[Close]

BLAST of CSPI06G06660 vs. TrEMBL
Match: A0A0A0K983_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G085120 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 6.7e-128
Identity = 226/276 (81.88%), Postives = 245/276 (88.77%), Query Frame = 1


Query: 19  DEAEKKLMKSDYKDGLMLNQGQVIEDEKLKKVIPKNLFLKSIRNGKYLRYISESENADGL 78
           DEAEKKLMKSD  D    N  +  E+E+L KVIPKNL LKSIRNGKYLRYISESENADGL
Sbjct: 123 DEAEKKLMKSDIDDS---NYEEEEENEELTKVIPKNLSLKSIRNGKYLRYISESENADGL 182

Query: 79  LQYSSKNMVGPYSKFVLHGSKTKPGFFHIRCCYNNKFWVRLSEDSNYIAAKANEEEDDTS 138
           L++S KN+VGPYSKF +H SKTKPGFFHIRCCYNNKFWVRLSEDSNYIAA ANEEEDDTS
Sbjct: 183 LRFSGKNIVGPYSKFSVHASKTKPGFFHIRCCYNNKFWVRLSEDSNYIAAVANEEEDDTS 242

Query: 139 KWSCTLFEPIIFAPDRTELYYIRHVQLNTFLFMAEGDPSPYNDCLVAREEDMRTTDKDLV 198
           KWSCTLFEPI F P++T LYYIRHVQLNTFL MAEGDPSPYNDCLVAR ED+ T D++LV
Sbjct: 243 KWSCTLFEPI-FVPEKTGLYYIRHVQLNTFLCMAEGDPSPYNDCLVARVEDITTIDENLV 302

Query: 199 LSVVTDWDSIFVLPKYIAFKSNNDRYLKPYRKYLKFSASSVEDPVVVFEIIPMQDGYVRI 258
           L  VTDWDSIF+LPKY+AFKSNNDRYL+P  KYLKFSASSVEDP VVFEII MQDGYVRI
Sbjct: 303 LLAVTDWDSIFILPKYVAFKSNNDRYLEPSGKYLKFSASSVEDPAVVFEIISMQDGYVRI 362

Query: 259 KHVSSGKYWILDPNWICCESIDINRDDPNTLFFPVK 295
           KHVSSGKYWI DP+WI C+SIDINRD+PNTLF+PVK
Sbjct: 363 KHVSSGKYWIRDPDWIWCDSIDINRDNPNTLFWPVK 394

[Close]

BLAST of CSPI06G06660 vs. TrEMBL
Match: A0A0A0KD65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G085100 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 7.7e-116
Identity = 207/294 (70.41%), Postives = 236/294 (80.27%), Query Frame = 1


Query: 1   MNLSRGRRKAGTDNLEGADEAEKKLMKSDYKDGLMLNQGQVIEDEKLKKVIPKNLFLKSI 60
           +N    R +   D  +  DEAEK+LMKSD  D    N  +V EDE+  KVIPKN  LK +
Sbjct: 117 LNDEMARERGEEDKADEIDEAEKELMKSDINDA---NYEEVEEDEESGKVIPKNFSLKCV 176

Query: 61  RNGKYLRYISESENADGLLQYSSKNMVGPYSKFVLHGSKTKPGFFHIRCCYNNKFWVRLS 120
           RN KYLRYISESEN DGLL+YSSKN+VGPYSKF +  SKTKPGFFHIRCCYNNKFWVRLS
Sbjct: 177 RNNKYLRYISESENTDGLLRYSSKNIVGPYSKFAIRSSKTKPGFFHIRCCYNNKFWVRLS 236

Query: 121 EDSNYIAAKANEEEDDTSKWSCTLFEPIIFAPDRTELYYIRHVQLNTFLFMAEGDPSPYN 180
           E+S+YIAA ANEEEDDTSKWS TLFEPI F  ++  L YIRHVQLN FL +AEG P PYN
Sbjct: 237 ENSDYIAAIANEEEDDTSKWSSTLFEPI-FVSEKPGLCYIRHVQLNAFLCIAEGAPFPYN 296

Query: 181 DCLVAREEDMRTTDKDLVLSVVTDWDSIFVLPKYIAFKSNNDRYLKPYRKYLKFSASSVE 240
           DCLVAR ED+ T D++L LS V DWDSIF+LP+Y+AFK NND+YL+P  KYLKFS SS E
Sbjct: 297 DCLVARVEDISTIDENLALSAVMDWDSIFILPRYVAFKGNNDKYLEPSEKYLKFSGSSSE 356

Query: 241 DPVVVFEIIPMQDGYVRIKHVSSGKYWILDPNWICCESIDINRDDPNTLFFPVK 295
           +P VVF+II MQDGYVRIKHVSSGKYWI DP+WI C+SIDINRD+PNTLF+PVK
Sbjct: 357 EPAVVFQIISMQDGYVRIKHVSSGKYWIRDPDWIWCDSIDINRDNPNTLFWPVK 406

[Close]

BLAST of CSPI06G06660 vs. TrEMBL
Match: A0A0A0KEX2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G084600 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.9e-56
Identity = 115/258 (44.57%), Postives = 161/258 (62.40%), Query Frame = 1


Query: 42  IEDEKLKKVIPKNLFLKSIRNGKYLRYISESENADGLLQYSSKNMVGPYSKFVLHGSKTK 101
           +E+E     +PK   LKS +NG+YLRYI++ +   G L +S  ++V P++KF +  +K K
Sbjct: 1   MEEESQLNTVPKYFTLKSRQNGRYLRYINDDKTMHGFLTFSGTHVVSPFAKFEVEKAKEK 60

Query: 102 P--GFFHIRCCYNNKFWVRLSEDSNYIAAKANEEEDDTSKWSCTLFEPIIFAPDRTELYY 161
              G  HIRCCYNNK+WVR SE S YI AKANE  +D +K+S TLFEP +F  D+ +++ 
Sbjct: 61  SNKGLVHIRCCYNNKYWVRWSEKSKYIVAKANEPNEDRTKFSSTLFEPTVFNNDQ-KIFR 120

Query: 162 IRHVQLNTFLFMAEGDPSPYNDCLVAREEDMRTTDKDLVLSVVTDWDSIFVLPKYIAFKS 221
            +HVQLN ++ +       + D L A          DL    + DW ++FVLPK++AFK 
Sbjct: 121 FKHVQLNHYVELRYHKAKQFQDALFANGLAFGFDKSDLF--TIFDWSTLFVLPKHVAFKG 180

Query: 222 NNDRYLKPY---RKYLKFSASSVEDPVVVFEIIPMQDGYVRIKHVSSGKYWILDPNWICC 281
           NN  YLK +    KYL+FS S V DP V  +I    DG+VRIK+   GK+WI DPNWI  
Sbjct: 181 NNGHYLKVHSSGTKYLEFSGSDVGDPRVGNQIFTTADGHVRIKNDYLGKFWIRDPNWILV 240

Query: 282 ESIDINRDDPNTLFFPVK 295
           ++ + + DDPN LF+PV+
Sbjct: 241 KASESDFDDPNNLFWPVR 255

[Close]

BLAST of CSPI06G06660 vs. TrEMBL
Match: A0A0A0KBV4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G085110 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.5e-55
Identity = 113/258 (43.80%), Postives = 165/258 (63.95%), Query Frame = 1


Query: 42  IEDEKLKKVIPKNLFLKSIRNGKYLRYISESENADGLLQYSSKNMVGPYSKFVLHGSKTK 101
           +E+E     +PK   LKS +NG+YLRYI++ +   G L++S  ++V P++KF +  +K K
Sbjct: 1   MEEESQLNTVPKYFTLKSRQNGRYLRYINDDKTMHGFLKFSGTHVVSPFAKFEVEKAKEK 60

Query: 102 P--GFFHIRCCYNNKFWVRLSEDSNYIAAKANEEEDDTSKWSCTLFEPIIFAPDRTELYY 161
              G  H+RCCYNNK+WVR SE S YI A ANE  +D +K+S TLFEP I+  D+  ++ 
Sbjct: 61  SNKGLVHVRCCYNNKYWVRWSEKSKYIVATANEPNEDKTKFSSTLFEP-IYNHDQ-NVFR 120

Query: 162 IRHVQLNTFLFMAEGDPSPYNDCLVAREEDMRTTDKDLVLSVVTDWDSIFVLPKYIAFKS 221
            +HVQLN ++ + + +   + D L A  +     + DL+   + DW ++FVLPK++AFK 
Sbjct: 121 FKHVQLNRYIQLRQHNTRQFQDALFAGSKGFEYDESDLL--TIVDWSTLFVLPKHVAFKG 180

Query: 222 NNDRYLKPY---RKYLKFSASSVEDPVVVFEIIPMQDGYVRIKHVSSGKYWILDPNWICC 281
           +N  YLK +    KYL+FS S V DP V  +I    DG+VRIK+    K+WI DPNWI  
Sbjct: 181 DNGHYLKVHSSGTKYLEFSGSDVGDPRVGNQIFTTSDGHVRIKNDYLEKFWIRDPNWIHV 240

Query: 282 ESIDINRDDPNTLFFPVK 295
           ++ + N DDPNTLF+PV+
Sbjct: 241 KASESNFDDPNTLFWPVR 254

[Close]

BLAST of CSPI06G06660 vs. NCBI nr
Match: gi|778722046|ref|XP_004140681.2| (PREDICTED: uncharacterized protein LOC101212469 [Cucumis sativus])

HSP 1 Score: 927.2 bits (2395), Expect = 1.2e-266
Identity = 459/471 (97.45%), Postives = 464/471 (98.51%), Query Frame = 1


Query: 1   MNLSRGRRKAGTDNLEGADEAEKKLMKSDYKDGLMLNQGQVIEDEKLKKVIPKNLFLKSI 60
           MNLSRGRRKAGTDNLEGADEAEKKLMKSDYKDGLMLNQGQVIEDEKLKKVIPKNLFLKSI
Sbjct: 1   MNLSRGRRKAGTDNLEGADEAEKKLMKSDYKDGLMLNQGQVIEDEKLKKVIPKNLFLKSI 60

Query: 61  RNGKYLRYISESENADGLLQYSSKNMVGPYSKFVLHGSKTKPGFFHIRCCYNNKFWVRLS 120
           RNGKYLRYIS+ ENADGLLQYSSKNMVGPYSKFVLHGSKTKPGFFHIRCCYNNKFWVRLS
Sbjct: 61  RNGKYLRYISKGENADGLLQYSSKNMVGPYSKFVLHGSKTKPGFFHIRCCYNNKFWVRLS 120

Query: 121 EDSNYIAAKANEEEDDTSKWSCTLFEPIIFAPDRTELYYIRHVQLNTFLFMAEGDPSPYN 180
           EDSNYIAAKANEEEDDTSKWSCTLFEPIIFAPDRTELYYIRHVQLNTFLFMAEGDPSPYN
Sbjct: 121 EDSNYIAAKANEEEDDTSKWSCTLFEPIIFAPDRTELYYIRHVQLNTFLFMAEGDPSPYN 180

Query: 181 DCLVAREEDMRTTDKDLVLSVVTDWDSIFVLPKYIAFKSNNDRYLKPYRKYLKFSASSVE 240
           DCLVAREEDMRTTDKDLVLSVVTDWDSIFVLPKYIAFKSNNDRYL+PYRKYLKFSASSVE
Sbjct: 181 DCLVAREEDMRTTDKDLVLSVVTDWDSIFVLPKYIAFKSNNDRYLEPYRKYLKFSASSVE 240

Query: 241 DPVVVFEIIPMQDGYVRIKHVSSGKYWILDPNWICCESIDINRDDPNTLFFPVKEIIVAR 300
           DPV+VFEIIPMQDGYVRIKHVSSGKYWILDPNWICCESIDINRDDPNTLF PVK     R
Sbjct: 241 DPVIVFEIIPMQDGYVRIKHVSSGKYWILDPNWICCESIDINRDDPNTLFLPVKVDNNIR 300

Query: 301 SVEDVEYRVKDARVYGKKIHSVSKGVAINNTKVDDKVSMKFSYERVVERTWSSSMSSTFG 360
           SVEDVEYRVKDARVYGKKIHSVSKGVAINNTKVDDKVSMKFSYERVVERTWSSSMSSTFG
Sbjct: 301 SVEDVEYRVKDARVYGKKIHSVSKGVAINNTKVDDKVSMKFSYERVVERTWSSSMSSTFG 360

Query: 361 IATRFNAMIPGVGRMKFELSMEASSANARQETEKEKSMVETEETITIPAMSKVKFSAVVT 420
           IATRFNAMIPGVGRMKFELSMEASSA+ARQETEKEKSMVETEETITIPAMSKVKFSAVVT
Sbjct: 361 IATRFNAMIPGVGRMKFELSMEASSASARQETEKEKSMVETEETITIPAMSKVKFSAVVT 420

Query: 421 HAYCDVPFSYTRRDTLKDGRQVTHRFEDGLYTGVTTYDYKFETEKVESYSD 472
           HAYCDVPFSYTRRDTLKDGRQVTHRFEDGL+TGVTTYDYKFETEKVESYSD
Sbjct: 421 HAYCDVPFSYTRRDTLKDGRQVTHRFEDGLFTGVTTYDYKFETEKVESYSD 471

[Close]

BLAST of CSPI06G06660 vs. NCBI nr
Match: gi|778722042|ref|XP_004140683.2| (PREDICTED: uncharacterized protein LOC101212952 [Cucumis sativus])

HSP 1 Score: 465.7 bits (1197), Expect = 9.7e-128
Identity = 226/276 (81.88%), Postives = 245/276 (88.77%), Query Frame = 1


Query: 19  DEAEKKLMKSDYKDGLMLNQGQVIEDEKLKKVIPKNLFLKSIRNGKYLRYISESENADGL 78
           DEAEKKLMKSD  D    N  +  E+E+L KVIPKNL LKSIRNGKYLRYISESENADGL
Sbjct: 123 DEAEKKLMKSDIDDS---NYEEEEENEELTKVIPKNLSLKSIRNGKYLRYISESENADGL 182

Query: 79  LQYSSKNMVGPYSKFVLHGSKTKPGFFHIRCCYNNKFWVRLSEDSNYIAAKANEEEDDTS 138
           L++S KN+VGPYSKF +H SKTKPGFFHIRCCYNNKFWVRLSEDSNYIAA ANEEEDDTS
Sbjct: 183 LRFSGKNIVGPYSKFSVHASKTKPGFFHIRCCYNNKFWVRLSEDSNYIAAVANEEEDDTS 242

Query: 139 KWSCTLFEPIIFAPDRTELYYIRHVQLNTFLFMAEGDPSPYNDCLVAREEDMRTTDKDLV 198
           KWSCTLFEPI F P++T LYYIRHVQLNTFL MAEGDPSPYNDCLVAR ED+ T D++LV
Sbjct: 243 KWSCTLFEPI-FVPEKTGLYYIRHVQLNTFLCMAEGDPSPYNDCLVARVEDITTIDENLV 302

Query: 199 LSVVTDWDSIFVLPKYIAFKSNNDRYLKPYRKYLKFSASSVEDPVVVFEIIPMQDGYVRI 258
           L  VTDWDSIF+LPKY+AFKSNNDRYL+P  KYLKFSASSVEDP VVFEII MQDGYVRI
Sbjct: 303 LLAVTDWDSIFILPKYVAFKSNNDRYLEPSGKYLKFSASSVEDPAVVFEIISMQDGYVRI 362

Query: 259 KHVSSGKYWILDPNWICCESIDINRDDPNTLFFPVK 295
           KHVSSGKYWI DP+WI C+SIDINRD+PNTLF+PVK
Sbjct: 363 KHVSSGKYWIRDPDWIWCDSIDINRDNPNTLFWPVK 394

[Close]

BLAST of CSPI06G06660 vs. NCBI nr
Match: gi|659120440|ref|XP_008460195.1| (PREDICTED: uncharacterized protein LOC103499080 [Cucumis melo])

HSP 1 Score: 461.8 bits (1187), Expect = 1.4e-126
Identity = 224/276 (81.16%), Postives = 243/276 (88.04%), Query Frame = 1


Query: 19  DEAEKKLMKSDYKDGLMLNQGQVIEDEKLKKVIPKNLFLKSIRNGKYLRYISESENADGL 78
           DEAEKKLMKSD  D    N  +  E+E+L KVIPKNL LKSIRNGKYLRYISESENADGL
Sbjct: 119 DEAEKKLMKSDIDDS---NYEEEEENEELTKVIPKNLSLKSIRNGKYLRYISESENADGL 178

Query: 79  LQYSSKNMVGPYSKFVLHGSKTKPGFFHIRCCYNNKFWVRLSEDSNYIAAKANEEEDDTS 138
           L+YS KN+VGPYSKF +H SKTKPGFFHIRCCYNNKFWVRLSEDSNYIAA ANEEEDDTS
Sbjct: 179 LRYSGKNIVGPYSKFSVHASKTKPGFFHIRCCYNNKFWVRLSEDSNYIAAIANEEEDDTS 238

Query: 139 KWSCTLFEPIIFAPDRTELYYIRHVQLNTFLFMAEGDPSPYNDCLVAREEDMRTTDKDLV 198
           KWSCTLFEPI F P++T  YYIRHVQLNTFL MAEGDPSPYNDCLVAR ED+   D++LV
Sbjct: 239 KWSCTLFEPI-FVPEKTGFYYIRHVQLNTFLCMAEGDPSPYNDCLVARVEDITAIDENLV 298

Query: 199 LSVVTDWDSIFVLPKYIAFKSNNDRYLKPYRKYLKFSASSVEDPVVVFEIIPMQDGYVRI 258
           LS VTDWDSIF+LPKY+AFKSNND+YL+P  KYLKFSASSVEDP VVFEII MQDGYVRI
Sbjct: 299 LSAVTDWDSIFILPKYVAFKSNNDQYLEPSGKYLKFSASSVEDPAVVFEIIAMQDGYVRI 358

Query: 259 KHVSSGKYWILDPNWICCESIDINRDDPNTLFFPVK 295
           KHVSSGKYWI DP+WI C+SIDI RD+PNTLF+PVK
Sbjct: 359 KHVSSGKYWIRDPDWIWCDSIDIKRDNPNTLFWPVK 390

[Close]

BLAST of CSPI06G06660 vs. NCBI nr
Match: gi|700191123|gb|KGN46327.1| (hypothetical protein Csa_6G085100 [Cucumis sativus])

HSP 1 Score: 425.6 bits (1093), Expect = 1.1e-115
Identity = 207/294 (70.41%), Postives = 236/294 (80.27%), Query Frame = 1


Query: 1   MNLSRGRRKAGTDNLEGADEAEKKLMKSDYKDGLMLNQGQVIEDEKLKKVIPKNLFLKSI 60
           +N    R +   D  +  DEAEK+LMKSD  D    N  +V EDE+  KVIPKN  LK +
Sbjct: 117 LNDEMARERGEEDKADEIDEAEKELMKSDINDA---NYEEVEEDEESGKVIPKNFSLKCV 176

Query: 61  RNGKYLRYISESENADGLLQYSSKNMVGPYSKFVLHGSKTKPGFFHIRCCYNNKFWVRLS 120
           RN KYLRYISESEN DGLL+YSSKN+VGPYSKF +  SKTKPGFFHIRCCYNNKFWVRLS
Sbjct: 177 RNNKYLRYISESENTDGLLRYSSKNIVGPYSKFAIRSSKTKPGFFHIRCCYNNKFWVRLS 236

Query: 121 EDSNYIAAKANEEEDDTSKWSCTLFEPIIFAPDRTELYYIRHVQLNTFLFMAEGDPSPYN 180
           E+S+YIAA ANEEEDDTSKWS TLFEPI F  ++  L YIRHVQLN FL +AEG P PYN
Sbjct: 237 ENSDYIAAIANEEEDDTSKWSSTLFEPI-FVSEKPGLCYIRHVQLNAFLCIAEGAPFPYN 296

Query: 181 DCLVAREEDMRTTDKDLVLSVVTDWDSIFVLPKYIAFKSNNDRYLKPYRKYLKFSASSVE 240
           DCLVAR ED+ T D++L LS V DWDSIF+LP+Y+AFK NND+YL+P  KYLKFS SS E
Sbjct: 297 DCLVARVEDISTIDENLALSAVMDWDSIFILPRYVAFKGNNDKYLEPSEKYLKFSGSSSE 356

Query: 241 DPVVVFEIIPMQDGYVRIKHVSSGKYWILDPNWICCESIDINRDDPNTLFFPVK 295
           +P VVF+II MQDGYVRIKHVSSGKYWI DP+WI C+SIDINRD+PNTLF+PVK
Sbjct: 357 EPAVVFQIISMQDGYVRIKHVSSGKYWIRDPDWIWCDSIDINRDNPNTLFWPVK 406

[Close]

BLAST of CSPI06G06660 vs. NCBI nr
Match: gi|645281008|ref|XP_008245436.1| (PREDICTED: uncharacterized protein LOC103343557 [Prunus mume])

HSP 1 Score: 270.8 bits (691), Expect = 4.6e-69
Identity = 164/465 (35.27%), Postives = 255/465 (54.84%), Query Frame = 1


Query: 51  IPKNLFLKSIRNGKYLRYISESENADGLLQYSSKNMVGPYSKFVLHGSKTKPGFFHIRCC 110
           +P+ + LKS  N KYL Y+ E     G L++S   +V  YSKF +  +K   G  HIRCC
Sbjct: 5   LPRYMVLKSRYNAKYLSYVKEDVQIHGFLKFSGDEVVSLYSKFHVEMAKGGNGLVHIRCC 64

Query: 111 YNNKFWVRLSEDSNYIAAKANEEEDDTSKWSCTLFEPI-IFAPDRTELYYIRHVQLNTFL 170
           YNNK+WVR SE+  +I A ANE E+D SKWSCTLFEP+ +   D  +    RHVQL  + 
Sbjct: 65  YNNKYWVRWSENHYWIVAGANEPEEDQSKWSCTLFEPVYVDNKDPAQGVRFRHVQLGHYA 124

Query: 171 FMAEGDPSPYNDCLVAREEDMRTTDKDLV-LSVVTDWDSIFVLPKYIAFKSNNDRYL--K 230
            +    P P + CL A        DKDL  + ++ DW+++ VLPK+++FK +N +YL  +
Sbjct: 125 CLWRVAP-PKDSCLFA---GSAAPDKDLCDICLIVDWETLLVLPKHVSFKGDNGKYLSAR 184

Query: 231 PYRK--YLKFSASSVEDPVVVFEIIPMQDGYVRIKHVSSGKYWILDPNWICCES-IDINR 290
            +++  +L+FS++ V +  V  E+    DG VRIK    GK+W   PNWI  +S +D N 
Sbjct: 185 TFKRLPFLQFSSTDVGESSVGNEVFSNGDGSVRIKSNHFGKFWRRSPNWIWADSNLDGNE 244

Query: 291 DDPNTLFFPVK---EIIVARSVEDVEY-------------------RVKDAR------VY 350
            + + LF+P+K     +  R++ +  +                    VK+A+      V 
Sbjct: 245 SNKDMLFWPIKLNDNKVALRNLGNDNFCFRLTTDGFESCLNAGRPSIVKEAQMEVEELVV 304

Query: 351 GKKIHSVSKGV-----------------AINNTKVDDKVSMKFSYERVVERTWSSSMSST 410
            + I++V+  +                 A+N T+ ++ + ++ SY+     TW+SS+S  
Sbjct: 305 SRSIYNVNFRLLDSRIYSQRVVSMATGDAVNRTQEENTIDLRLSYKDSRSSTWNSSVSMK 364

Query: 411 FGIATRFNAMIPGVGRMKFELSMEASSANARQETEKEKSMVETEETITIPAMSKVKFSAV 464
            G++T+    +P + + + E+S E ++     ET   +S VET   + +P MS VK S +
Sbjct: 365 LGLSTKVQTGVPLIAKGEIEISTEFATEFQWGETNTSESEVETVYRVVVPPMSMVKVSLM 424

The following BLAST results are available for this feature:

BLAST of CSPI06G06660 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI06G06660 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA25_CUCSA	8.2e-267	97.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G086140 PE=4 SV=1	[more]
A0A0A0K983_CUCSA	6.7e-128	81.88	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G085120 PE=4 SV=1	[more]
A0A0A0KD65_CUCSA	7.7e-116	70.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G085100 PE=4 SV=1	[more]
A0A0A0KEX2_CUCSA	6.9e-56	44.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G084600 PE=4 SV=1	[more]
A0A0A0KBV4_CUCSA	1.5e-55	43.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G085110 PE=4 SV=1	[more]

BLAST of CSPI06G06660 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI06G06660 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778722046\|ref\|XP_004140681.2\|	1.2e-266	97.45	PREDICTED: uncharacterized protein LOC101212469 [Cucumis sativus]	[more]
gi\|778722042\|ref\|XP_004140683.2\|	9.7e-128	81.88	PREDICTED: uncharacterized protein LOC101212952 [Cucumis sativus]	[more]
gi\|659120440\|ref\|XP_008460195.1\|	1.4e-126	81.16	PREDICTED: uncharacterized protein LOC103499080 [Cucumis melo]	[more]
gi\|700191123\|gb\|KGN46327.1\|	1.1e-115	70.41	hypothetical protein Csa_6G085100 [Cucumis sativus]	[more]
gi\|645281008\|ref\|XP_008245436.1\|	4.6e-69	35.27	PREDICTED: uncharacterized protein LOC103343557 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008998	Agglutinin
IPR023307	Aerolysin-like toxin, beta complex domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G06660.1	CSPI06G06660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008998	Agglutinin domain	PFAM	PF07468	Agglutinin	coord: 212..285 score: 8.8E-7coord: 51..198 score: 2.0
IPR008998	Agglutinin domain	SMART	SM00791	agglutinin	coord: 209..335 score: 4.8E-6coord: 49..203 score: 1.
IPR008998	Agglutinin domain	unknown	SSF50382	Agglutinin	coord: 51..195 score: 1.96E-35coord: 205..293 score: 6.41
IPR023307	Aerolysin-like toxin, beta complex domain	GENE3D	G3DSA:2.170.15.10		coord: 310..466 score: 2.0
None	No IPR available	GENE3D	G3DSA:2.80.10.50		coord: 50..208 score: 2.3E-39coord: 211..309 score: 3.7
None	No IPR available	PANTHER	PTHR39244	FAMILY NOT NAMED	coord: 50..469 score: 2.4
None	No IPR available	PANTHER	PTHR39244:SF1	SUBFAMILY NOT NAMED	coord: 50..469 score: 2.4
None	No IPR available	unknown	SSF56973	Aerolisin/ETX pore-forming domain	coord: 271..464 score: 1.01

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G06660	Csa6G085100	Cucumber (Chinese Long) v2	cpicuB314
CSPI06G06660	ClCG06G001060	Watermelon (Charleston Gray)	cpiwcgB503

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G06660	Cucumber (Chinese Long) v3	cpicucB364
CSPI06G06660	Watermelon (97103) v2	cpiwmbB495
CSPI06G06660	Wax gourd	cpiwgoB548
CSPI06G06660	Cucumber (Gy14) v1	cgycpiB517
CSPI06G06660	Cucurbita maxima (Rimu)	cmacpiB379
CSPI06G06660	Cucurbita maxima (Rimu)	cmacpiB928
CSPI06G06660	Cucurbita moschata (Rifu)	cmocpiB367
CSPI06G06660	Cucurbita moschata (Rifu)	cmocpiB907
CSPI06G06660	Melon (DHL92) v3.5.1	cpimeB433
CSPI06G06660	Watermelon (97103) v1	cpiwmB556
CSPI06G06660	Cucurbita pepo (Zucchini)	cpecpiB328
CSPI06G06660	Bottle gourd (USVL1VR-Ls)	cpilsiB404
CSPI06G06660	Melon (DHL92) v3.6.1	cpimedB431
CSPI06G06660	Cucumber (Gy14) v2	cgybcpiB288
CSPI06G06660	Silver-seed gourd	carcpiB0095
CSPI06G06660	Silver-seed gourd	carcpiB0804