CSPI06G06630 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G06630
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 5710779 .. 5713229 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTACTTTGTAATTTGCATTTAACATATTTCTCCATCCACATAAACATAAACATGGTTATTCTTTTATAGATCTTATTAGTAATAGAAATGTAGTGCTATCATAAGAATGGTTTATTATTTAGTACAAGATTATTTCCAAACTCAACATTGGCAAGTAAAAACAAACACATACCTTTTATTCTTTGATCCCTCCCCTCCCCTTTGATTTATCCTTGGCATAACAACATCAAAATCACAGTCTAACTCCTTCCTCACACATACAAACACACAAAGTGAAACTAAATTAACACATCAAATTAAACCAACAGCACACACAATAATATTATTCTTCACACATCATGAAACGCTAAATCACAATGATTCTACTTTTTCAGTCTCAATTTTATAATCATAAGTTGTAACACCTCTAAAAATCCCATCGTCCAAACGATGTGTCACTTGTCTCCCATCTTTCAAAGTGTCCCTTCGAGTGTAGGAGAAAGGAATATCACAACAAGCTTGTTTTACTACTGCACTAAACTTCACCTTCGACATTGCCGGTATCTTTATCTCCTCTCCTGACTCCACGAATGATTTTTCCTTCTCCGTTTCTTCCCTTGTCTTTTCCCCCGAAACCTCCAATGAAAGCTCAAACTTCAGACTTCCAACCGTTGGAATCTTGGAATTAAACCTAGTAGCAACTCCAAAAGTCGACGACACTGAAGAACTCCATGTTCTTTCCACCTTCTTCTCATACCTCAACTTCAAACTTACTTTATCAACGACTTTCGTGTTGTTAATCGCAACCCCTTTTGACACCGTGAGAGTCTTGTTGCCATAAACCCTTGCATCATTAACACGATAGTCAACATCTTCTATGCTTCTTGCAACAACAATCTCTGTTACTTCCAAACGTGCGGTTTCTGTTATCGTTGCAACAGCCGCATTAAGGCAGTCGGTCTTGCCTTCGGTTGTCAAGCTCTCGCAAAAATGGTTGTTTGCTTTGTTACGAAAAGCCACAATATTGTTATCAACTTTCACAGGCCAAAATAAAGTGTTGGGGTCGTCGTTTTCAGTGTCGATCGATTGACACCATATCCAATTTGGATCGCGAATCCAATACTTACCTGAACTCACATGTTTGATACGAACATATCCATCTTGCATGGATATTATCTGAAACACAACGGCAGGTTCCTCCGAGCTAGAACCCGAGAATTTGAGGTATTTTTCAGATGGTTCTAGATATTTGTCGTTGTTTCCTTTGAAAGCTACATATCTTGGTAGTATGAATATGGAGTCCCAATCCATGACGGCTGAGAGGGCAAGATTCTCATCAATAGTTGATATATCTTCTACTCTTGCAACTAAACAATCGTTATAAGGAAAAGGAGCTTCTTCAGCTATGCAAAGGAAGGCGTTGAGTTGAACATGACGAATGTAACAGAGTCCAGGTTTCTCCGATACAAAAATCGGTTCGAACAAAGTGCTCGACCATTTTGATGTATCATCTTCTTCTTCATTGGCAATGGCTGCAATATAGTCAGAGTTTTCGGATAAACGAACCCAGAATTTGTTGTTGTAACAGCACCTTATGTGGAAGAAACCTGGCTTAGTTTTTGATGAGCGGATGGCAAACTTCGAATACGGGCCAACAATGTTCTTGCTGGAGTATCGAAGAAGTCCATCCGTGTTTTCACTTTCGCTTATATACCGAAGGTATTTGTTGTTGCGGACGCATTTGAGGGAGAAGTTCTTTGGGATTACCTTTCCTGATTCTTCATCCTCTTCCACTTCTTCATAGTTTGCATCGTTTATATCACTCTTCATCAACTCTTTCTCTGCTTCATCTATCTCATCGGCTTTGTCTTCTTCACCACGTTCTCGTGCCATTTCATCATTAAGCATCTTCAATATATCGTCAGGGGCTTTTTCGCTTTCTTTTGAATCGCCTTGGTCAAAATGGAAGTCATCACCATAATAATCTTCATTAATTTGGTCCAATATAGTATCTTTAAGATCCTTTTTCGGCTTCTTTTCTTTGTTTTCAAATACTTTTTCACCCAAATTCTCAGTCGCCTTACCAACATTTTCTATAGCCTTTCCGGTGCCCTCCACGACGGTTCCAATGCCACCAACGACAGGCGCCTTCTCAGCCGCATTCCCCACTGTTTCAACAGCCTTTCCTGCTCCTTTCACAGCTCCTCCCAAAATGTCAGTCCCAGCTTTTCCCAATCCTTTGAAAAGATTCATCTTTTTTCTTTCTATTTTGTTTTTCTTCTTCCCTCTTCTCTTCTCTTACTAAATGTTGTGGTACAACTGAAGCTCCATTGAAGAGGAACTAATTTATATAGGATGATGAGAAGTAGCTTTTCACCTCTCACTTTGCTTACATAAATAATTATTTGAGGTGTAATTTGTCCTCTTTTTTGGAGATATTTTTGAAGAAAAAGGAAGATAAAGTATGGGGAC

mRNA sequence

ATGGAAGTCATCACCATAATAATCTTCATTAATTTGGTCCAATATAGTATCTTTAAGATCCTTTTTCGGCTTCTTTTCTTTGTTTTCAAATACTTTTTCACCCAAATTCTCAGTCGCCTTACCAACATTTTCTATAGCCTTTCCGGTGCCCTCCACGACGGTTCCAATGCCACCAACGACAGGCGCCTTCTCAGCCGCATTCCCCACTGTTTCAACAGCCTTTCCTGCTCCTTTCACAGCTCCTCCCAAAATGTCAGTCCCAGCTTTTCCCAATCCTTTGAAAAGATTCATCTTTTTTCTTTCTATTTTGTTTTTCTTCTTCCCTCTTCTCTTCTCTTACTAAATGTTGTGGTACAACTGAAGCTCCATTGA

Coding sequence (CDS)

ATGGAAGTCATCACCATAATAATCTTCATTAATTTGGTCCAATATAGTATCTTTAAGATCCTTTTTCGGCTTCTTTTCTTTGTTTTCAAATACTTTTTCACCCAAATTCTCAGTCGCCTTACCAACATTTTCTATAGCCTTTCCGGTGCCCTCCACGACGGTTCCAATGCCACCAACGACAGGCGCCTTCTCAGCCGCATTCCCCACTGTTTCAACAGCCTTTCCTGCTCCTTTCACAGCTCCTCCCAAAATGTCAGTCCCAGCTTTTCCCAATCCTTTGAAAAGATTCATCTTTTTTCTTTCTATTTTGTTTTTCTTCTTCCCTCTTCTCTTCTCTTACTAAATGTTGTGGTACAACTGAAGCTCCATTGA
Homology
[Close]
BLAST of CSPI06G06630 vs. TrEMBL
Match: A0A0A0KA19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G085105 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 4.4e-55
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

Query: 1   MEVITIIIFINLVQYSIFKILFRLLFFVFKYFFTQILSRLTNIFYSLSGALHDGSNATND 60
           MEVITIIIFINLVQYSIFKILFRLLFFVFKYFFTQILSRLTNIFYSLSGALHD SNATND
Sbjct: 1   MEVITIIIFINLVQYSIFKILFRLLFFVFKYFFTQILSRLTNIFYSLSGALHDSSNATND 60

Query: 61  RRLLSRIPHCFNSLSCSFHSSSQNVSPSFSQSFEKIHLFSFYFVFLLPSSLLLLNVVVQL 120
           RRLLSRIPHCFNSLSCSFHSSSQNVSPSFSQSFEKIHLFSFYFVFLLPSSLLLLNVVVQL
Sbjct: 61  RRLLSRIPHCFNSLSCSFHSSSQNVSPSFSQSFEKIHLFSFYFVFLLPSSLLLLNVVVQL 120

Query: 121 KLH 124
           KLH
Sbjct: 121 KLH 123

[Close]
BLAST of CSPI06G06630 vs. NCBI nr
Match: gi|700191124|gb|KGN46328.1| (hypothetical protein Csa_6G085105 [Cucumis sativus])

HSP 1 Score: 221.9 bits (564), Expect = 6.4e-55
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

Query: 1   MEVITIIIFINLVQYSIFKILFRLLFFVFKYFFTQILSRLTNIFYSLSGALHDGSNATND 60
           MEVITIIIFINLVQYSIFKILFRLLFFVFKYFFTQILSRLTNIFYSLSGALHD SNATND
Sbjct: 1   MEVITIIIFINLVQYSIFKILFRLLFFVFKYFFTQILSRLTNIFYSLSGALHDSSNATND 60

Query: 61  RRLLSRIPHCFNSLSCSFHSSSQNVSPSFSQSFEKIHLFSFYFVFLLPSSLLLLNVVVQL 120
           RRLLSRIPHCFNSLSCSFHSSSQNVSPSFSQSFEKIHLFSFYFVFLLPSSLLLLNVVVQL
Sbjct: 61  RRLLSRIPHCFNSLSCSFHSSSQNVSPSFSQSFEKIHLFSFYFVFLLPSSLLLLNVVVQL 120

Query: 121 KLH 124
           KLH
Sbjct: 121 KLH 123

The following BLAST results are available for this feature:
BLAST of CSPI06G06630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI06G06630 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KA19_CUCSA4.4e-5599.19Uncharacterized protein OS=Cucumis sativus GN=Csa_6G085105 PE=4 SV=1[more]
BLAST of CSPI06G06630 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI06G06630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191124|gb|KGN46328.1|6.4e-5599.19hypothetical protein Csa_6G085105 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G06630.1CSPI06G06630.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G06630Cucsa.362030Cucumber (Gy14) v1cgycpiB540
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G06630Silver-seed gourdcarcpiB0095
CSPI06G06630Silver-seed gourdcarcpiB0804
CSPI06G06630Cucumber (Chinese Long) v3cpicucB364
CSPI06G06630Watermelon (97103) v2cpiwmbB495
CSPI06G06630Wax gourdcpiwgoB548
CSPI06G06630Cucumber (Gy14) v1cgycpiB517
CSPI06G06630Cucurbita maxima (Rimu)cmacpiB379
CSPI06G06630Cucurbita maxima (Rimu)cmacpiB928
CSPI06G06630Cucurbita moschata (Rifu)cmocpiB367
CSPI06G06630Cucurbita moschata (Rifu)cmocpiB907
CSPI06G06630Cucumber (Chinese Long) v2cpicuB314
CSPI06G06630Melon (DHL92) v3.5.1cpimeB433
CSPI06G06630Watermelon (Charleston Gray)cpiwcgB503
CSPI06G06630Watermelon (97103) v1cpiwmB556
CSPI06G06630Cucurbita pepo (Zucchini)cpecpiB328
CSPI06G06630Bottle gourd (USVL1VR-Ls)cpilsiB404
CSPI06G06630Melon (DHL92) v3.6.1cpimedB431
CSPI06G06630Cucumber (Gy14) v2cgybcpiB288