CSPI06G06070 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACAAATGACACCTCTCTCAATTTTCCCACCAGATAGGGCGTTTGTTCCTCTTACTGCCCAATTCACTCGCGCCATCAACAAAGAGCTACAAATTCTGTGGATAAATTTTCATCCATGGCAATGGCGGTTTCCTTTTCACCTCTACATTTGAAGCCCTCATTCCACTCTTCTTCTCATTCTCAGTTTTCCTGCTCCCTCCGCCCTGCCGTCATCCTTCCGGTAACGCTACTCTCTTTCTCTTTCCGTTTCAATTTCAAATTTCGGATTACATCGACAGATTTATTTCAGTTTTGTTTTGTGTTGTGTTTTACAGGGTTTGGGGAACAACTCGGGTGATTATGATAAATTGAGGCTTCTTTTGAAAGAGCGGCATGGTGTTCACTCTGTGGTTGTTAAAGTGTCTAGAATTGACTGGCTGAGAAATGCTGCTGGATTGCTTGATCCTAATTACTGGCGCGGTACTCTCCGTCCTCGCCCTGTCCTAGATTGGTACTTCCACTGTCGTTTAGGTGTGAGTTAGGGATTTTTTTGGTTTGGAATCTGTTGGATTAACTGCATCGTTGCTTAAGCTGGTGAGCAGGTATCTAAAGAAAACAGATGAGGCAATCCAAGAAGCCAAGGAGTTAGCTCAAGGTATTTGTCTCATTTTTTCTTCTTTGTTCGCTCTGCTTTTTTATATTTATTTGTATTTGATGATCCAATTTAGACTCTATTGGAATTTTGTTTTAAAACTATCAATATGCACGGATTAATGTACGTAAATTACAGAAAATTGGTGCAATGAAGTAGATTGGGACAATTTTTCAATAATACAAACAGTTCCAATTTGATCCTCTGCAGTTAAACTATGTCAAGGAACAGACATTTACTTGCTGAACTGAAATGGTGGAAAAAATGCCATTGAATGCTAATGACTCCATAAGACTTGCCAAAAGAGCATTATTAGTCATGAGTACTATGCTTTTCAGTATAGTACATAGCAAAATATCATTCAATTATGCATAATTTAAATCAACGGCTTGGCATTCCGTGATAGATCTTGGAAGTGGAAAGTAAATAGTAAGCATATTGGTTTGTATACTAGGAAAAGATGGGAAAATGATACGACAGAATTTTATGTCAATGCTCAACTAATGTTGTTTTCCTCTTCTTACTCTTTTTTTGCTGTCCTTCATGAATTTTTGCTTTCATCTACAAATTCACAGCAGTCACAGTGTATTGCAGTTCCTTAAGATGGAATTATCTCAATCTTTAGGTGGGACTTTATCCTTGATCGGGCACTCAGCAGGCGGATGGCTTGCACGAGTTTACATGGAAGAATTTGGTATATCTCAAATTTCCATGTTGCTGACTCTTGGAACTCCTCACCTGTAAGTTAATATTTGTCTTGAATCTCAAATTTCTTCTTGAAGTTTAAAGCTTCTTTTTAGTTCACAAACTTTCAGGATAATTTTATTTAGGTTGATGAACTTTAAATTTTTTCATGTTATACTTTAAGCTTTCTTAAACATAATTATTTTACTCTTTGATGTTATGTTGTTTAATGAAGTTGTTTAGGTTAGCAAAGGCAAACATTAGGTGGAGTTGGGTATTAGCGGTATGACAATAAAGAAGACTAAAACGATAACTTTTTCTAAGAATTCAATAGCTAAATCAATATTTTCCAAGTTTATGGACCAAAATGAAACTTAAATGTACCTATATCACATAAATAAACATTTTTCATTAGAATGATGGATCACATGCTTGACTGAATGTCCTGTTGTTTCCTATTATCTCGAGCTTTGTGAAATTTTCATGTTTAAATACCAGAAAATAAAACAGTGGATCTTTCTTAGGCCGCCTCCAAAAGGTGTGCCAGGAGTGATTGACCAGACGAGGGGGCTTCTGAATTATGTGGACAAAAATTGCTCGAAAGCTGGGTACAATCCTGAATTGAAATTTGTATGTATAGCTGGAAGGTAAGTGGAAACTTTGAGACCTCATTTTCTGTTTTCTTTGCTGAAGAATTCTATCTGTTGCATCCTTAGGTGAAAATATAGCCTTGGACATATTTTATGTTTTCAATTTTGTTTTTAAAAGGAAAAGTTAGAGTGAGGAAAGGAAGATATGCTGTGAGGATGAAAAGAGAAGTAGTTGGAACTATATGTAGAGAGAGGAGATAAGTTAAAGAAACTTTGAGTTAGATATGCCACAGAGAGAAGTCCAAGAGAATGAGAAAAACAGGAGCTTGAGAGAACATAAGTTGGAGAGACGTTAGGAAAAAATGGGGAAGAAAATGTATTACAGGGTTACTCGTGAATGTGAAGAAGAGATAAAGGTTTGTTTTCAAAAATAAATGAAAAGCGTTCCAAATATTAATGAAAATCAGATGGATTATAAATAAGAACAACTATGTTAAACTTCAGTTTTTACTCCTTAAATTCAACTTGTGAATATATACGGTGAACTATGAGTCAACCACGACCAAATGCAGGTACATCAAAGGTTCTCGCTTGTTTGGTAACTCAGATGCAAACACCATTCTTGCAGCTGCTTCTATCTCCAGCAACCAACCGACTCCAGAGCTAGCTATCACAAACAACACTAGCAACTCAACTGACTCAACGACGACATCACTACGCGCTCGCTTTGTCGGGCAAGGATACAAGCAGGTAATCAAAATGAAGTACATTCAAAACAAGATATGAATGTGTTGTATTAAAATCTAATGTGTGAACTTGACCATTTTAACTTGTTAAGATAGTGATCAATCATAAAGTCAGAAGTTTTGAATATCCTTGTTCATAAGTTGAATACAAAATTAAAATAATGTTTGTGCATGTTTGGCTTTGGATCAGGTGTGTGGGGAGAGTGAGGTATGGGGAGATGGGGTTGTTCCAGAAGTGTCAGCTCATTTGGAGGGAGCACTCAACATTAGTTTTGATGGAGTCTATCATTCTCCTGTTGGATCTGATGATGAATTGAGACCCTGGTATGGTTCCCCTGCTATTCTTGATCAATGGGTTCATCATCTTCTCCATTAAATCTTGTTACCCCTCCTAGTCACTCTGAAATTAATAATATTCAATTTTTTTTATTCCATTCATCCTTGCTACACGGCTACCAACATTAGTGTAATTCAACTTGCTTGAAATTATGACATCAAGCCTCAAAATCTTACTCACCTATATACGGTTAGTAACAATTGTTTTCTTTT ATGGCAATGGCGGTTTCCTTTTCACCTCTACATTTGAAGCCCTCATTCCACTCTTCTTCTCATTCTCAGTTTTCCTGCTCCCTCCGCCCTGCCGTCATCCTTCCGGGTTTGGGGAACAACTCGGGTGATTATGATAAATTGAGGCTTCTTTTGAAAGAGCGGCATGGTGTTCACTCTGTGGTTGTTAAAGTGTCTAGAATTGACTGGCTGAGAAATGCTGCTGGATTGCTTGATCCTAATTACTGGCGCGGTACTCTCCGTCCTCGCCCTGTCCTAGATTGGTATCTAAAGAAAACAGATGAGGCAATCCAAGAAGCCAAGGAGTTAGCTCAAGGTGGGACTTTATCCTTGATCGGGCACTCAGCAGGCGGATGGCTTGCACGAGTTTACATGGAAGAATTTGGTATATCTCAAATTTCCATGTTGCTGACTCTTGGAACTCCTCACCTGCCGCCTCCAAAAGGTGTGCCAGGAGTGATTGACCAGACGAGGGGGCTTCTGAATTATGTGGACAAAAATTGCTCGAAAGCTGGGTACAATCCTGAATTGAAATTTGTATGTATAGCTGGAAGGTACATCAAAGGTTCTCGCTTGTTTGGTAACTCAGATGCAAACACCATTCTTGCAGCTGCTTCTATCTCCAGCAACCAACCGACTCCAGAGCTAGCTATCACAAACAACACTAGCAACTCAACTGACTCAACGACGACATCACTACGCGCTCGCTTTGTCGGGCAAGGATACAAGCAGGTGTGTGGGGAGAGTGAGGTATGGGGAGATGGGGTTGTTCCAGAAGTGTCAGCTCATTTGGAGGGAGCACTCAACATTAGTTTTGATGGAGTCTATCATTCTCCTGTTGGATCTGATGATGAATTGAGACCCTGGTATGGTTCCCCTGCTATTCTTGATCAATGGGTTCATCATCTTCTCCATTAA ATGGCAATGGCGGTTTCCTTTTCACCTCTACATTTGAAGCCCTCATTCCACTCTTCTTCTCATTCTCAGTTTTCCTGCTCCCTCCGCCCTGCCGTCATCCTTCCGGGTTTGGGGAACAACTCGGGTGATTATGATAAATTGAGGCTTCTTTTGAAAGAGCGGCATGGTGTTCACTCTGTGGTTGTTAAAGTGTCTAGAATTGACTGGCTGAGAAATGCTGCTGGATTGCTTGATCCTAATTACTGGCGCGGTACTCTCCGTCCTCGCCCTGTCCTAGATTGGTATCTAAAGAAAACAGATGAGGCAATCCAAGAAGCCAAGGAGTTAGCTCAAGGTGGGACTTTATCCTTGATCGGGCACTCAGCAGGCGGATGGCTTGCACGAGTTTACATGGAAGAATTTGGTATATCTCAAATTTCCATGTTGCTGACTCTTGGAACTCCTCACCTGCCGCCTCCAAAAGGTGTGCCAGGAGTGATTGACCAGACGAGGGGGCTTCTGAATTATGTGGACAAAAATTGCTCGAAAGCTGGGTACAATCCTGAATTGAAATTTGTATGTATAGCTGGAAGGTACATCAAAGGTTCTCGCTTGTTTGGTAACTCAGATGCAAACACCATTCTTGCAGCTGCTTCTATCTCCAGCAACCAACCGACTCCAGAGCTAGCTATCACAAACAACACTAGCAACTCAACTGACTCAACGACGACATCACTACGCGCTCGCTTTGTCGGGCAAGGATACAAGCAGGTGTGTGGGGAGAGTGAGGTATGGGGAGATGGGGTTGTTCCAGAAGTGTCAGCTCATTTGGAGGGAGCACTCAACATTAGTTTTGATGGAGTCTATCATTCTCCTGTTGGATCTGATGATGAATTGAGACCCTGGTATGGTTCCCCTGCTATTCTTGATCAATGGGTTCATCATCTTCTCCATTAA
BLAST of CSPI06G06070 vs. TrEMBL
Match: A0A0A0K9V1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G078580 PE=4 SV=1) HSP 1 Score: 641.7 bits (1654), Expect = 4.5e-181 Identity = 310/311 (99.68%), Postives = 311/311 (100.00%), Query Frame = 1
BLAST of CSPI06G06070 vs. TrEMBL
Match: M5X341_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009016mg PE=4 SV=1) HSP 1 Score: 472.6 bits (1215), Expect = 3.6e-130 Identity = 235/314 (74.84%), Postives = 271/314 (86.31%), Query Frame = 1
BLAST of CSPI06G06070 vs. TrEMBL
Match: B9SDA5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1515610 PE=4 SV=1) HSP 1 Score: 465.3 bits (1196), Expect = 5.8e-128 Identity = 222/309 (71.84%), Postives = 263/309 (85.11%), Query Frame = 1
BLAST of CSPI06G06070 vs. TrEMBL
Match: D7UB88_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0024g00660 PE=4 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 3.8e-127 Identity = 222/297 (74.75%), Postives = 255/297 (85.86%), Query Frame = 1
BLAST of CSPI06G06070 vs. TrEMBL
Match: B9I6F3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s06790g PE=4 SV=1) HSP 1 Score: 455.3 bits (1170), Expect = 6.0e-125 Identity = 218/313 (69.65%), Postives = 257/313 (82.11%), Query Frame = 1
BLAST of CSPI06G06070 vs. TAIR10
Match: AT5G17670.1 (AT5G17670.1 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 427.9 bits (1099), Expect = 5.2e-120 Identity = 213/316 (67.41%), Postives = 247/316 (78.16%), Query Frame = 1
BLAST of CSPI06G06070 vs. NCBI nr
Match: gi|449473958|ref|XP_004154031.1| (PREDICTED: uncharacterized protein LOC101213079 [Cucumis sativus]) HSP 1 Score: 641.7 bits (1654), Expect = 6.5e-181 Identity = 310/311 (99.68%), Postives = 311/311 (100.00%), Query Frame = 1
BLAST of CSPI06G06070 vs. NCBI nr
Match: gi|659120240|ref|XP_008460089.1| (PREDICTED: uncharacterized protein LOC103499004 [Cucumis melo]) HSP 1 Score: 619.0 bits (1595), Expect = 4.5e-174 Identity = 298/311 (95.82%), Postives = 307/311 (98.71%), Query Frame = 1
BLAST of CSPI06G06070 vs. NCBI nr
Match: gi|596013866|ref|XP_007218717.1| (hypothetical protein PRUPE_ppa009016mg [Prunus persica]) HSP 1 Score: 472.6 bits (1215), Expect = 5.2e-130 Identity = 235/314 (74.84%), Postives = 271/314 (86.31%), Query Frame = 1
BLAST of CSPI06G06070 vs. NCBI nr
Match: gi|255565972|ref|XP_002523974.1| (PREDICTED: uncharacterized protein LOC8282028 [Ricinus communis]) HSP 1 Score: 465.3 bits (1196), Expect = 8.3e-128 Identity = 222/309 (71.84%), Postives = 263/309 (85.11%), Query Frame = 1
BLAST of CSPI06G06070 vs. NCBI nr
Match: gi|225436219|ref|XP_002273572.1| (PREDICTED: uncharacterized protein LOC100248966 isoform X1 [Vitis vinifera]) HSP 1 Score: 462.6 bits (1189), Expect = 5.4e-127 Identity = 222/297 (74.75%), Postives = 255/297 (85.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |