CSPI06G04550 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTGGGTATAAATGTAGAGGGCGGAGTATGGTAAGAAGAGAGCATATCGAATTCAAAATCATTTGGCCGGTCGTCCCAACCTACCATCGTCCATGGCACTTCACTCTCACATTGAGAGAGTGCTCTGGACCCATGACCAAATTTCGGCTCGAGTCTCTGACCTTGCCTCCCAAATCTCCATCGCCTTCGACGGAGCCTCTTCCCCCCCAGTCTTTGTCGGCGTCGCCACCGGAGCCTTCATTTTCCTCGCCGACTTAGTCCGCCGCATCAACATTCCAATCGCAGTTGACTTCGTTCGTGTCGAATCTTACGGTTTCGGTACTCAGTCTAATGGTGCTCCTACAATCTCATCGGACTTGAAGGTCGATGTTAAGAACAAGCATGTAATTCTGGTATTTCCCTATTACTCGCTCCGTCTATGTTAAAGCCATTGGATTATTGTGCTTGTGTTTTTTTTTTTTTTCTTGTTCCTGTACCCTTTTCCGATGAAAAATTTAAAGAATTTTGTTTTTGGCTCTTAACGTGCTGTTCGGTTTTGTGCCTAATGGCTCCAGTTTACGTCGTCGCCTTGGACTCTCTCTTTTTAGGATTTTCTTTATTTCATGCCTTTATACTGAATCACTGAAGTATGTCTGTGGTAGAGGTAGATTCTGTTGTAATGTGCGTGTTCTTTTTTGGGAAATTTGGCATGTCAGATCCTTACTTTTAGGGTGGGAACATAAGGAAGAAATAATTTAAAGACTGGGGAGAATCAATATCAGATAGTTTATGGAATTGGATTTTGAATTTGTTCAAATTTTGGCATATATTCGAAAAGAGCACTTTCATATCCAGGAAATAAATCCGACAGTGTTAATCTGACAAAAAATTACGCGAGACTAAGTTCATGGTCCTGATAAATATTTATTTGTTAACAACTATGTGAGGCTGGCTGACATGCATACCCTTTTCTCTATGATTAGAATATTATTAATGAATTTCAGTTGATAATAGTACTTGTTCCTCATTGTTTTTCCTTCAGTTGAAGATAACTTTGGGAGTATTAAAAGATAAACTGTCGTCCTCAACTAAAGATTAATGAGATCAAGATATTTATTTGAAGAAGAGAAACTACGAACTTGTTCCTGTTTTCCATTTTTGAGTTCTGAATTTTAGGTTTTTATTTTCTTTTTAATTCTTTTCGATCGGAGATCTATTTGTCTTTTTGTTGACTGTGGGTGTAATTCTAGCCTACCCTTTTGTTCAACTTTTTAGCTGTTAACATATCCCAAAAAACAAAATAAAAAGTAAGAAGGTAGATTATAGATTCTCTTCGTCCGTGGGAGGATTGATCATTTGGAATATTGTGACATTGGTGATGTGATGCATCATCATTCAATCTCTTCATAAATGACTTATTGTATTTTTCTATGTTGTACTTTTTACTATCTGTCTCTTAAATCTTAATCATGTCAGATCTGTGAAATGTTGGTTGAGTCTATGGATCGTAATGTGAAATGGAAATGGCAATGGCATGAGTTAATCTGCATATCACTGCTAAGTAAAATCTCCTTGAAGAGCAGTTCTCTGTTCCATGGTTTTGATGGGTTTAATTTTCTTCTTTTGTCTCGTCATCAGCATTTCATAGATTGATTTTCATTTGTATTTGACGTGGGCTCTTAGTTGACATTTCTGCTGTAACTATTGTAAAACATGCTCAGCTTCTACTTAACTTTTATAATAAATCTCCTGTTAGGTCGAGGATATTGTAGATACTGGGAATACTTTATCATGTCTCATTGCTCACATGGAGGTAAAAGGAGCATCGTCTGTATCAGTATGCACTTTTCTTGATAAACCAACAAGACGACAAGTTAATTTTCCGTTAGTAGGCGAAGGAAAGTTCTACTCCGGATTCCAAGTAAGCTAAAATCGAATCTCCCTCTTAAAACAAGAACACAACACACACTGAAATGTCTTAGCCATCTATGGATTATTAAACTAGGAACATTACCTGACATTTCTTTGTATTGAAAAATTTCATAAAGATTTTCCAAGTAGTAGATAAATGAAGGTACCCCACAATGACCAATCACACATTCCTCTTCGGCTGGCATTAGTTGATTCATAGCTAAAAAGGTGTTTTTGTTTTCTCTATGATTTGTTTTGAGCAGTGTCCAGATTATTTTGTGGTCGGGTATGGAATGGACTTTGCGGAGCTGTACAGAAATTTACCATATGTTGGCATTTTGAAACCTGAATGTTACAAGTGATTAAATATAGCATCTCAGTACGGGAGGCATTATATTTACTATTTAGGTTTATATTTACTATTTAGGTTTGAATACTACTTCCATCCTCTACTTTTGGTTTCGTCATATACTTTCAAAAGGTTCATTTTGCTCTTATTACTGTTAACTTTGATTCATTTTAGTCCTTGTAGTTTCAAAAAGTGACCGTT ATGGCACTTCACTCTCACATTGAGAGAGTGCTCTGGACCCATGACCAAATTTCGGCTCGAGTCTCTGACCTTGCCTCCCAAATCTCCATCGCCTTCGACGGAGCCTCTTCCCCCCCAGTCTTTGTCGGCGTCGCCACCGGAGCCTTCATTTTCCTCGCCGACTTAGTCCGCCGCATCAACATTCCAATCGCAGTTGACTTCGTTCGTGTCGAATCTTACGGTTTCGGTACTCAGTCTAATGGTGCTCCTACAATCTCATCGGACTTGAAGGTCGATGTTAAGAACAAGCATGTAATTCTGGTCGAGGATATTGTAGATACTGGGAATACTTTATCATGTCTCATTGCTCACATGGAGGTAAAAGGAGCATCGTCTGTATCAGTATGCACTTTTCTTGATAAACCAACAAGACGACAAGTTAATTTTCCGTTAGTAGGCGAAGGAAAGTTCTACTCCGGATTCCAATGTCCAGATTATTTTGTGGTCGGGTATGGAATGGACTTTGCGGAGCTGTACAGAAATTTACCATATGTTGGCATTTTGAAACCTGAATGTTACAAGTGA ATGGCACTTCACTCTCACATTGAGAGAGTGCTCTGGACCCATGACCAAATTTCGGCTCGAGTCTCTGACCTTGCCTCCCAAATCTCCATCGCCTTCGACGGAGCCTCTTCCCCCCCAGTCTTTGTCGGCGTCGCCACCGGAGCCTTCATTTTCCTCGCCGACTTAGTCCGCCGCATCAACATTCCAATCGCAGTTGACTTCGTTCGTGTCGAATCTTACGGTTTCGGTACTCAGTCTAATGGTGCTCCTACAATCTCATCGGACTTGAAGGTCGATGTTAAGAACAAGCATGTAATTCTGGTCGAGGATATTGTAGATACTGGGAATACTTTATCATGTCTCATTGCTCACATGGAGGTAAAAGGAGCATCGTCTGTATCAGTATGCACTTTTCTTGATAAACCAACAAGACGACAAGTTAATTTTCCGTTAGTAGGCGAAGGAAAGTTCTACTCCGGATTCCAATGTCCAGATTATTTTGTGGTCGGGTATGGAATGGACTTTGCGGAGCTGTACAGAAATTTACCATATGTTGGCATTTTGAAACCTGAATGTTACAAGTGA
BLAST of CSPI06G04550 vs. Swiss-Prot
Match: HPRT_ENTFA (Hypoxanthine-guanine phosphoribosyltransferase OS=Enterococcus faecalis (strain ATCC 700802 / V583) GN=hpt PE=3 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.2e-36 Identity = 79/185 (42.70%), Postives = 118/185 (63.78%), Query Frame = 1
BLAST of CSPI06G04550 vs. Swiss-Prot
Match: TILS_LISIN (Bifunctional protein TilS/HprT OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=tilS/hprT PE=3 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.2e-36 Identity = 78/185 (42.16%), Postives = 120/185 (64.86%), Query Frame = 1
BLAST of CSPI06G04550 vs. Swiss-Prot
Match: TILS_LISMF (Bifunctional protein TilS/HprT OS=Listeria monocytogenes serotype 4b (strain F2365) GN=tilS/hprT PE=3 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.2e-36 Identity = 77/185 (41.62%), Postives = 120/185 (64.86%), Query Frame = 1
BLAST of CSPI06G04550 vs. Swiss-Prot
Match: TILS_LISMO (Bifunctional protein TilS/HprT OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=tilS/hprT PE=3 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.2e-36 Identity = 77/185 (41.62%), Postives = 120/185 (64.86%), Query Frame = 1
BLAST of CSPI06G04550 vs. Swiss-Prot
Match: HPRT_STAAC (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain COL) GN=hpt PE=3 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 3.8e-35 Identity = 75/184 (40.76%), Postives = 118/184 (64.13%), Query Frame = 1
BLAST of CSPI06G04550 vs. TrEMBL
Match: A0A0A0K9G9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G052780 PE=4 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 1.5e-102 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1
BLAST of CSPI06G04550 vs. TrEMBL
Match: A9PD32_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 2.8e-77 Identity = 141/186 (75.81%), Postives = 164/186 (88.17%), Query Frame = 1
BLAST of CSPI06G04550 vs. TrEMBL
Match: A5C9H5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g02520 PE=4 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 1.4e-76 Identity = 138/180 (76.67%), Postives = 158/180 (87.78%), Query Frame = 1
BLAST of CSPI06G04550 vs. TrEMBL
Match: A0A0B2PEX3_GLYSO (Bifunctional protein tilS/hprT OS=Glycine soja GN=glysoja_011524 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 2.4e-76 Identity = 139/185 (75.14%), Postives = 163/185 (88.11%), Query Frame = 1
BLAST of CSPI06G04550 vs. TrEMBL
Match: I1LDB6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G220400 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 2.4e-76 Identity = 139/185 (75.14%), Postives = 163/185 (88.11%), Query Frame = 1
BLAST of CSPI06G04550 vs. TAIR10
Match: AT1G71750.2 (AT1G71750.2 Hypoxanthine-guanine phosphoribosyltransferase) HSP 1 Score: 254.6 bits (649), Expect = 4.7e-68 Identity = 127/197 (64.47%), Postives = 154/197 (78.17%), Query Frame = 1
BLAST of CSPI06G04550 vs. NCBI nr
Match: gi|449446377|ref|XP_004140948.1| (PREDICTED: hypoxanthine-guanine phosphoribosyltransferase [Cucumis sativus]) HSP 1 Score: 380.2 bits (975), Expect = 2.1e-102 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1
BLAST of CSPI06G04550 vs. NCBI nr
Match: gi|659113720|ref|XP_008456720.1| (PREDICTED: hypoxanthine-guanine phosphoribosyltransferase [Cucumis melo]) HSP 1 Score: 365.5 bits (937), Expect = 5.4e-98 Identity = 180/187 (96.26%), Postives = 182/187 (97.33%), Query Frame = 1
BLAST of CSPI06G04550 vs. NCBI nr
Match: gi|720016124|ref|XP_010261055.1| (PREDICTED: hypoxanthine-guanine phosphoribosyltransferase [Nelumbo nucifera]) HSP 1 Score: 297.4 bits (760), Expect = 1.8e-77 Identity = 141/185 (76.22%), Postives = 162/185 (87.57%), Query Frame = 1
BLAST of CSPI06G04550 vs. NCBI nr
Match: gi|118484836|gb|ABK94285.1| (unknown [Populus trichocarpa]) HSP 1 Score: 296.2 bits (757), Expect = 4.0e-77 Identity = 141/186 (75.81%), Postives = 164/186 (88.17%), Query Frame = 1
BLAST of CSPI06G04550 vs. NCBI nr
Match: gi|955346928|ref|XP_003536401.2| (PREDICTED: hypoxanthine-guanine phosphoribosyltransferase-like isoform X1 [Glycine max]) HSP 1 Score: 295.4 bits (755), Expect = 6.9e-77 Identity = 140/187 (74.87%), Postives = 165/187 (88.24%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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