CSPI06G03690 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G03690
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Late embryogenesis abundant hydroxyproline-rich glycoprotein family, putative
Location	Chr6 : 3398261 .. 3399681 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTGTTTCTCTCTGTTTCTCTCCATTTTTCCAAAAATATTTCCCCCATATTCTCTCATTCTCTCTCACCCCCTCCTCCATTCAATTCAATCCCCTTCCATCTTTTCAATCCCTCATTTCCCATCCATTCCCTCCCTTTGATCCAAATCTCACTTCCTCAATACTCTCTCTCTTCCATGGCGGATTTGCCATTGAAACCGCCTCTCCAAAAGCCCCCTGGCTACAAGGATCACAACACCACCGCCACCTCCTCCTCCTCCGCCTCCACCGCCACCCACCTTCCTCCACCTCTCCGTCCCAAACCTCGTCCCCCTTCCTCCTACAAACCCAAGAAACGCAAACGCAATTGCTGCAGAACATGCTGCTGCATTTTTTGCTTCCTCATCCTCTTCCTCATCGTTGTTGCCGCCCTCGCCCTCGCTCTCTTCTACCTACTCTACGACCCAAAACTCCCCGTCTTCCACCTCCTCGCTTTCCGGATCTCGTCCTTCAAAGTCTCCGCCACACCGGACGGGTCGTTCCTCGACTCGCAAGTGTCGATTCGAGTGGAATTCAAGAATCCAAATGAGAAGCTTTCGATAAAGTATGGTAAGATTGAGTATGATGTCACGGTGGGGCAGGCGACGGAGTTTGGGAGGAGAGAGTTGGCTGGATTTACGCAGGGGAGGAGGAGTACAACGACGGTGAAGGCGGAGGCGGCGGTGAAGAATAAGATGCTGGCAGTTGAGGATGGGGGGAGGCTGTTGTCGAAGTTTCAGAGTAAGGCGCTGGAGGTGAAAGTTGAAGCGGAGACGGAGGTGGGTGTGGTTGTTCAAGGATGGGGATTGGGTCCGATCACCGTCAAGTTGGATTGTGAGTCTAAATTGAAGAATATTGATGGTGGTGATATGCCTACTTGCAACATCAATTTGCTCAGATGGTATTTTCTTCCATTCTCTTTTTCTCTTTTTCAATCATATCTTATATTCCTATAAATATAATTTTACTTACATATATTAACACTCTCCTATAATAATAATAATTTCTAATGTCTCTAATTCAATACTCTCATTATCTAATTCAATTGTTTTTATAAAACAAAAAGATTGGCTTAAATGTAAATGACTTTTTGAACCACCAAGAAATATCATCATGATTGCATCTTCCAAGGCTATCACTTCTTTGTTCCACATCTAATGAATTTGAAATATATATATAAACAAATGAATTATTGTAAAGTACTTATGGGTTCTTTTTTGCTTCTAACTGCAGGATCAATATACGTGGATGAAATTATTCCTCCCAAGAATTATATTTATATTGAAAATGATAATATAATCATTTTCTCGATAATATAATCATTTTCTCTCTCTTTTTTAATTTTTTATATTGGGGTGAAAATTTTCTTTTTGCAATTCTTTTCCTTTTTTCTTTTCCTACCC

mRNA sequence

ATGGCGGATTTGCCATTGAAACCGCCTCTCCAAAAGCCCCCTGGCTACAAGGATCACAACACCACCGCCACCTCCTCCTCCTCCGCCTCCACCGCCACCCACCTTCCTCCACCTCTCCGTCCCAAACCTCGTCCCCCTTCCTCCTACAAACCCAAGAAACGCAAACGCAATTGCTGCAGAACATGCTGCTGCATTTTTTGCTTCCTCATCCTCTTCCTCATCGTTGTTGCCGCCCTCGCCCTCGCTCTCTTCTACCTACTCTACGACCCAAAACTCCCCGTCTTCCACCTCCTCGCTTTCCGGATCTCGTCCTTCAAAGTCTCCGCCACACCGGACGGGTCGTTCCTCGACTCGCAAGTGTCGATTCGAGTGGAATTCAAGAATCCAAATGAGAAGCTTTCGATAAAGTATGGTAAGATTGAGTATGATGTCACGGTGGGGCAGGCGACGGAGTTTGGGAGGAGAGAGTTGGCTGGATTTACGCAGGGGAGGAGGAGTACAACGACGGTGAAGGCGGAGGCGGCGGTGAAGAATAAGATGCTGGCAGTTGAGGATGGGGGGAGGCTGTTGTCGAAGTTTCAGAGTAAGGCGCTGGAGGTGAAAGTTGAAGCGGAGACGGAGGTGGGTGTGGTTGTTCAAGGATGGGGATTGGGTCCGATCACCGTCAAGTTGGATTGTGAGTCTAAATTGAAGAATATTGATGGTGGTGATATGCCTACTTGCAACATCAATTTGCTCAGATGGATCAATATACGTGGATGA

Coding sequence (CDS)

ATGGCGGATTTGCCATTGAAACCGCCTCTCCAAAAGCCCCCTGGCTACAAGGATCACAACACCACCGCCACCTCCTCCTCCTCCGCCTCCACCGCCACCCACCTTCCTCCACCTCTCCGTCCCAAACCTCGTCCCCCTTCCTCCTACAAACCCAAGAAACGCAAACGCAATTGCTGCAGAACATGCTGCTGCATTTTTTGCTTCCTCATCCTCTTCCTCATCGTTGTTGCCGCCCTCGCCCTCGCTCTCTTCTACCTACTCTACGACCCAAAACTCCCCGTCTTCCACCTCCTCGCTTTCCGGATCTCGTCCTTCAAAGTCTCCGCCACACCGGACGGGTCGTTCCTCGACTCGCAAGTGTCGATTCGAGTGGAATTCAAGAATCCAAATGAGAAGCTTTCGATAAAGTATGGTAAGATTGAGTATGATGTCACGGTGGGGCAGGCGACGGAGTTTGGGAGGAGAGAGTTGGCTGGATTTACGCAGGGGAGGAGGAGTACAACGACGGTGAAGGCGGAGGCGGCGGTGAAGAATAAGATGCTGGCAGTTGAGGATGGGGGGAGGCTGTTGTCGAAGTTTCAGAGTAAGGCGCTGGAGGTGAAAGTTGAAGCGGAGACGGAGGTGGGTGTGGTTGTTCAAGGATGGGGATTGGGTCCGATCACCGTCAAGTTGGATTGTGAGTCTAAATTGAAGAATATTGATGGTGGTGATATGCCTACTTGCAACATCAATTTGCTCAGATGGATCAATATACGTGGATGA

Homology

[Close]

BLAST of CSPI06G03690 vs. TrEMBL
Match: A0A0A0KCD8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G042460 PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 1.1e-137
Identity = 252/253 (99.60%), Postives = 252/253 (99.60%), Query Frame = 1


Query: 1   MADLPLKPPLQKPPGYKDHNTTATSSSSASTATHLPPPLRPKPRPPSSYKPKKRKRNCCR 60
           MADLPLKPPLQKPPGYKDHNTTATSSSSASTATHLPPPLRPKPRPPSSYKPKKRKRNCCR
Sbjct: 1   MADLPLKPPLQKPPGYKDHNTTATSSSSASTATHLPPPLRPKPRPPSSYKPKKRKRNCCR 60

Query: 61  TCCCIFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVSATPDGSFLDSQV 120
           TCCCIFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVS TPDGSFLDSQV
Sbjct: 61  TCCCIFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVSTTPDGSFLDSQV 120

Query: 121 SIRVEFKNPNEKLSIKYGKIEYDVTVGQATEFGRRELAGFTQGRRSTTTVKAEAAVKNKM 180
           SIRVEFKNPNEKLSIKYGKIEYDVTVGQATEFGRRELAGFTQGRRSTTTVKAEAAVKNKM
Sbjct: 121 SIRVEFKNPNEKLSIKYGKIEYDVTVGQATEFGRRELAGFTQGRRSTTTVKAEAAVKNKM 180

Query: 181 LAVEDGGRLLSKFQSKALEVKVEAETEVGVVVQGWGLGPITVKLDCESKLKNIDGGDMPT 240
           LAVEDGGRLLSKFQSKALEVKVEAETEVGVVVQGWGLGPITVKLDCESKLKNIDGGDMPT
Sbjct: 181 LAVEDGGRLLSKFQSKALEVKVEAETEVGVVVQGWGLGPITVKLDCESKLKNIDGGDMPT 240

Query: 241 CNINLLRWINIRG 254
           CNINLLRWINIRG
Sbjct: 241 CNINLLRWINIRG 253

[Close]

BLAST of CSPI06G03690 vs. TrEMBL
Match: A0A061DTS6_THECC (Late embryogenesis abundant hydroxyproline-rich glycoprotein family, putative OS=Theobroma cacao GN=TCM_005206 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-52
Identity = 117/252 (46.43%), Postives = 161/252 (63.89%), Query Frame = 1


Query: 1   MADLPLKPPLQKPPGYKDHNTTATSSSSASTATHLPPPLRPKPRPPSSYKPKKRKRNCCR 60
           M + PLKP LQKPPGYKD +  A            PPP   KP  P S+ PKKR+  CCR
Sbjct: 1   MPEPPLKPVLQKPPGYKDPSAPAVKPGFR------PPPR--KPVLPPSFHPKKRRGGCCR 60

Query: 61  TCCCIFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVSATPDGSFLDSQV 120
            CCC FC   L LI++  +  A+FYL +DPKLP FH+ + RIS F V+  PDG++LD+Q 
Sbjct: 61  VCCCCFCIFFLILILLLLICGAVFYLWFDPKLPGFHVQSVRISRFNVTNKPDGTYLDAQT 120

Query: 121 SIRVEFKNPNEKLSIKYGKIEYDVTVGQA---TEFGRRELAGFTQGRRSTTTVKAEAAVK 180
           + R+E KNPN K++  YG  E DV+VG+    TE G   + GFT G+++TT++K E  V 
Sbjct: 121 TTRLEVKNPNAKMTYYYGNTEVDVSVGEGGDETELGTTTVHGFTMGKQNTTSLKVETKVI 180

Query: 181 NKMLAVEDGGRLLSKFQSKALEVKVEAETEVGVVVQGWGLGPITVKLDCES-KLKNIDGG 240
           NK++    G RL ++++SK+L V VEA T++G+ V G  +G + V + C+   LK +DGG
Sbjct: 181 NKLVDDGVGTRLQARYRSKSLRVSVEARTKIGLGVAGLKIGMVGVTVKCDGIALKRLDGG 240

Query: 241 DMPTCNINLLRW 249
           DMP C IN+L+W
Sbjct: 241 DMPKCVINMLKW 244

[Close]

BLAST of CSPI06G03690 vs. TrEMBL
Match: W9SAG5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003064 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 9.4e-52
Identity = 117/253 (46.25%), Postives = 164/253 (64.82%), Query Frame = 1


Query: 1   MADLPLKPP-LQKPPGYKDHNTTATSSSSASTATHLPPPLRPKPRPPSSYKPKKRKRNCC 60
           MA+ PLKPP LQKPPGY+D          A+    +  P + KP  P+S+ P+KR+RN C
Sbjct: 1   MAEQPLKPPPLQKPPGYRD---------PAAPGKPVARPPQRKPVLPASFHPRKRRRNWC 60

Query: 61  RTCCCIFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVSATPDGSFLDSQ 120
           RTCCC     +L L +  A+A  +FYL ++PKLPVFHL + RI  F V+  PDG++LD+ 
Sbjct: 61  RTCCCFVFVFLLLLTLAVAIAGGIFYLWFEPKLPVFHLQSLRIPQFNVTVKPDGTYLDAG 120

Query: 121 VSIRVEFKNPNEKLSIKYGKIEYDVTVG--QATEFGRRELAGFTQGRRSTTTVKAEAAVK 180
              R+E KNPN KL + YG    +V+VG  +  E GR++L GFTQG+ +TT++K E  VK
Sbjct: 121 TVTRIEVKNPNGKLELYYGGTHVEVSVGEDEDAELGRKDLEGFTQGKENTTSLKVETTVK 180

Query: 181 NKMLAVEDGGRLLSKFQSKALEVKVEAETEVGVVVQGWGLGPITVKLDCES-KLKNIDGG 240
           N+++    G RL S ++SK L VK+EA+T VG +VQG  +G + V + C    LK +D G
Sbjct: 181 NQLVDDGLGKRLKSGYKSKDLVVKIEAKTSVGYIVQGVKIGTVEVGVLCGGVSLKKLDSG 240

Query: 241 DMPTCNINLLRWI 250
           DMP C+I+LL+W+
Sbjct: 241 DMPKCSIDLLKWV 244

[Close]

BLAST of CSPI06G03690 vs. TrEMBL
Match: A0A0B0NJM7_GOSAR (D-alanine--poly (Phosphoribitol) ligase subunit 1 OS=Gossypium arboreum GN=F383_18367 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 5.7e-49
Identity = 111/255 (43.53%), Postives = 159/255 (62.35%), Query Frame = 1


Query: 1   MADLPLKPPLQKPPGYKDHNTTATSSSSASTATHLPPPLRPKPRPPSSYKPKKRKRNCCR 60
           M++ P+KP LQKPPGYKD       SS A      PPP   KP  P S+ PKKRK +  R
Sbjct: 1   MSEPPVKPVLQKPPGYKD------PSSPAGQRRFRPPPR--KPVLPPSFHPKKRKTSYGR 60

Query: 61  TCCCIFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVSATPDGSFLDSQV 120
            CCC FC   L  +++  +  A+FYL +DPKLP FH+ +FRIS F V+  PDG++LD++ 
Sbjct: 61  ACCCCFCIFFLIFLLLILICGAVFYLWFDPKLPGFHIQSFRISRFNVTKRPDGTYLDART 120

Query: 121 SIRVEFKNPNEKLSIKYGKIEYDVTVGQA---TEFGRRELAGFTQGRRSTTTVKAEAAVK 180
           + R+E KNPN K+   YG  E +V++G+    TE G   +  FT   ++T +++ E    
Sbjct: 121 TTRLEVKNPNRKMIYYYGDTEVEVSLGEGGYETELGTTTVPAFTMLEKNTRSLRVETKAS 180

Query: 181 NKMLAVEDGGRLLSKFQSKALEVKVEAETEVGVVVQGWGLGPITVKLDCES-KLKNIDGG 240
           NK++  E G +L ++++SK+L V VEA T+VGV V G  +G + V + C+    K +DGG
Sbjct: 181 NKLVVDEVGNKLRARYRSKSLPVNVEARTKVGVGVAGLKIGMVGVTVKCDGMSKKQLDGG 240

Query: 241 DMPTCNINLLRWINI 252
           DMP C IN+L+W+NI
Sbjct: 241 DMPKCVINMLKWLNI 247

[Close]

BLAST of CSPI06G03690 vs. TrEMBL
Match: A0A0D2QQD3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G105400 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.7e-48
Identity = 109/255 (42.75%), Postives = 159/255 (62.35%), Query Frame = 1


Query: 1   MADLPLKPPLQKPPGYKDHNTTATSSSSASTATHLPPPLRPKPRPPSSYKPKKRKRNCCR 60
           M++ P+KP LQKPPGYKD N      S A      PPP   KP  P S+ PKKRK +  R
Sbjct: 1   MSEPPVKPVLQKPPGYKDPN------SPAGQRRFRPPPR--KPVLPPSFHPKKRKTSYGR 60

Query: 61  TCCCIFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVSATPDGSFLDSQV 120
            CCC FC   L  +++  +  A+FYL +DP+LP FH+ +FRIS F V+  PDG++LD++ 
Sbjct: 61  ACCCCFCIFFLIFLLLILICGAVFYLWFDPQLPGFHIQSFRISRFNVTKRPDGTYLDART 120

Query: 121 SIRVEFKNPNEKLSIKYGKIEYDVTVGQA---TEFGRRELAGFTQGRRSTTTVKAEAAVK 180
           + R+E KNPN K++  YG  E +++ G+    TE G   +  FT   ++T +++ E    
Sbjct: 121 TTRLEVKNPNGKMTYYYGDTEVEISFGEGGYETELGTTTVPAFTMLEKNTRSLRVETIAS 180

Query: 181 NKMLAVEDGGRLLSKFQSKALEVKVEAETEVGVVVQGWGLGPITVKLDCES-KLKNIDGG 240
           NK++  E G +L ++++SK+L V VEA T+VGV V G  +G + V + C+    K +DGG
Sbjct: 181 NKLVVDEVGNKLRARYRSKSLPVNVEARTKVGVGVAGLKIGMVGVTVKCDGMSKKQLDGG 240

Query: 241 DMPTCNINLLRWINI 252
           DMP C IN+L+W+NI
Sbjct: 241 DMPKCVINMLKWLNI 247

[Close]

BLAST of CSPI06G03690 vs. TAIR10
Match: AT2G46300.1 (AT2G46300.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 187.2 bits (474), Expect = 1.3e-47
Identity = 105/260 (40.38%), Postives = 150/260 (57.69%), Query Frame = 1


Query: 1   MADLPLKPPLQKPPGYKDHNTTATSSSSASTATHLPPPLRPKPRP-----PSSYKPKKRK 60
           MAD  + P LQKPPGY+D N ++            PPP++ +P       P+SY+PKK++
Sbjct: 1   MADYQMNPVLQKPPGYRDPNMSSPPPP--------PPPIQQQPMRKAVPMPTSYRPKKKR 60

Query: 61  RNCCRTCCCIFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVSATPDGSF 120
           R+CCR CCC  C  ++  I +  +  A+FYL +DPKLP F L +FR+  FK++  PDG+ 
Sbjct: 61  RSCCRFCCCCICITLVLFIFLLLVGTAVFYLWFDPKLPTFSLASFRLDGFKLADDPDGAS 120

Query: 121 LDSQVSIRVEFKNPNEKLSIKYGKIEYDVTVGQA---TEFGRRELAGFTQGRRSTTTVKA 180
           L +    RVE KNPN KL   YG    D++VG     T  G   + GF QG +++T+VK 
Sbjct: 121 LSATAVARVEMKNPNSKLVFYYGNTAVDLSVGSGNDETGMGETTMNGFRQGPKNSTSVKV 180

Query: 181 EAAVKNKMLAVEDGGRLLSKFQSKALEVKVEAETEVGVVVQGWGLGPITVKLDCESKLKN 240
           E  VKN+++      RL +KFQSK L + V A+T+VG+ V G  +G + V L C     N
Sbjct: 181 ETTVKNQLVERGLAKRLAAKFQSKDLVINVVAKTKVGLGVGGIKIGMLAVNLRCGGVSLN 240

Query: 241 IDGGDMPTCNINLLRWINIR 253
               D P C +N L+W+ I+
Sbjct: 241 KLDTDSPKCILNTLKWVTIQ 252

[Close]

BLAST of CSPI06G03690 vs. TAIR10
Match: AT4G01110.1 (AT4G01110.1 unknown protein)

HSP 1 Score: 126.3 bits (316), Expect = 2.6e-29
Identity = 90/257 (35.02%), Postives = 140/257 (54.47%), Query Frame = 1


Query: 6   LKPPLQKPPGYKD-HNTTAT---SSSSASTATHLPPPLRPKPRPPSSYKPKKRKRNCCRT 65
           LKP LQKPPGY++ H+   T   SSSS+S+    PP       P + Y  KKR+ + CR 
Sbjct: 7   LKPVLQKPPGYRELHSQPQTPLGSSSSSSSMLRRPPK---HAIPAAFYPTKKRQWSRCRV 66

Query: 66  CCCIFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVSATPDG---SFLDS 125
            CC  C  +  +I++  L +++F+L Y P+LPV  L +FR+S+F  S    G   S L +
Sbjct: 67  FCCCVCITVAIVILLLILTVSVFFLYYSPRLPVVRLSSFRVSNFNFSGGKAGDGLSQLTA 126

Query: 126 QVSIRVEFKNPNEKLSIKYGKIEYDVTVGQ---ATEFGRRELAGFTQGRRSTTTVKAEAA 185
           + + R++F+NPN KL   YG ++  V+VG+    T  G  ++ GF +   + T V     
Sbjct: 127 EATARLDFRNPNGKLRYYYGNVDVAVSVGEDDFETSLGSTKVKGFVEKPGNRTVVIVPIK 186

Query: 186 VKNKMLAVEDGGRLLSKFQSKALEVKVEAETEVGVVVQGWGLGPITVKLDCES-KLKNID 245
           VK + +      RL +  +SK L VKV A+T+VG+ V    +  + V + C   +L+ +D
Sbjct: 187 VKKQQVDDPTVKRLRADMKSKKLVVKVMAKTKVGLGVGRRKIVTVGVTISCGGVRLQTLD 246

Query: 246 GGDMPTCNINLLRWINI 252
              M  C I +L+WI +
Sbjct: 247 -SKMSKCTIKMLKWIKL 259

[Close]

BLAST of CSPI06G03690 vs. TAIR10
Match: AT1G01453.2 (AT1G01453.2 unknown protein)

HSP 1 Score: 122.1 bits (305), Expect = 5.0e-28
Identity = 83/253 (32.81%), Postives = 132/253 (52.17%), Query Frame = 1


Query: 2   ADLPLKPPLQKPPGYKDHNTTATSSSSASTATHLPPPLRPKPRPPSSYKPKKRKRNCCRT 61
           A+ PL+P LQKPPG++D     ++  S +      P  RP+P  P+    KKR+ + CR 
Sbjct: 16  AEKPLQPALQKPPGFRDQQNQPSAPPSGTATL---PRRRPRPIHPAD---KKRRCSFCRV 75

Query: 62  CCCIFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVS--ATPDG-SFLDS 121
            CC  C L   ++++  +A+A+F+L Y PKLPV  L +F+IS+F  S   + DG SFL +
Sbjct: 76  FCCCVCILFAVILLLILIAVAVFFLWYSPKLPVVRLASFKISNFNFSDGKSDDGWSFLSA 135

Query: 122 QVSIRVEFKNPNEKLSIKYGKIEYDVTVGQ---ATEFGRRELAGFTQGRRSTTTVKAEAA 181
             +  ++F+NPN KL+  YG  +  V +G+    T     ++ GF +   + T V     
Sbjct: 136 DTTSVLDFRNPNGKLTFYYGDTDVAVILGEKDFETNLESTKVKGFIEKPGNRTAVIVPTT 195

Query: 182 VKNKMLAVEDGGRLLSKFQSKALEVKVEAETEVGVVVQGWGLGPITVKLDCESKLKNIDG 241
           V+ + +      RL  + +SK L V V A+T+VG+ V    +  + V L C   +     
Sbjct: 196 VRKRQVDDPTAKRLQVELKSKKLLVTVTAKTKVGLAVGSRKIVTVGVSLRCGGVILQTLD 255

Query: 242 GDMPTCNINLLRW 249
             M  C I +L+W
Sbjct: 256 SKMAQCTIKMLKW 262

[Close]

BLAST of CSPI06G03690 vs. TAIR10
Match: AT1G17620.1 (AT1G17620.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 72.4 bits (176), Expect = 4.5e-13
Identity = 58/227 (25.55%), Postives = 107/227 (47.14%), Query Frame = 1


Query: 9   PLQKPPGYKDHNTTATSSSSASTATHLPPPLRPKPRPPSSYKPKKRKRNCCRTCCCIFCF 68
           P  KPP         T+ +  +    L    RP  RPP+  +     R CC  CCC   F
Sbjct: 8   PASKPPAIVGGGAPTTNPTFPANKAQLYNANRPAYRPPAGRRRTSHTRGCCCRCCCWTIF 67

Query: 69  LILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVSATPDGSFLDSQVSIRVEFKN 128
           +I+ L+++ A A A+ YL+Y P+ P F +   +IS+   ++      L + +S+ V  +N
Sbjct: 68  VIILLLLIVAAASAVVYLIYRPQRPSFTVSELKISTLNFTSAVR---LTTAISLSVIARN 127

Query: 129 PNEKLSIKYGKIEYDVTVGQATE-------FGRRELAGFTQGRRSTTTVKAEAAVKNKML 188
           PN+ +   Y     D+T+ +A+         G+  +A F+ G+++TTT+++        L
Sbjct: 128 PNKNVGFIYDVT--DITLYKASTGGDDDVVIGKGTIAAFSHGKKNTTTLRSTIGSPPDEL 187

Query: 189 AVEDGGRLLSKFQS-KALEVKVEAETEVGVVVQGWGLGPITVKLDCE 228
                G+L    ++ KA+ +K+   ++V V +         +++ CE
Sbjct: 188 DEISAGKLKGDLKAKKAVAIKIVLNSKVKVKMGALKTPKSGIRVTCE 229

[Close]

BLAST of CSPI06G03690 vs. TAIR10
Match: AT1G65690.1 (AT1G65690.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-09
Identity = 49/169 (28.99%), Postives = 76/169 (44.97%), Query Frame = 1


Query: 9   PLQKPPGYKDHNTTATSSSSASTATHLPPPLRPKPRPPSSY----KPKKRKRNCCRTCCC 68
           P+Q P       T       +S + H  P   P  + P  +     PKKR+  CCR  C 
Sbjct: 9   PVQDPEAATARPTAPLVPRGSSRSEHGDPSKVPLNQRPQRFVPLAPPKKRRSCCCRCFCY 68

Query: 69  IFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVSATPDGSFLDSQVSIRV 128
            FCFL+L ++ V A ++ + YL++ PKLP + +   +++ F   A    S L +  ++ +
Sbjct: 69  TFCFLLLLVVAVGA-SIGILYLVFKPKLPDYSIDRLQLTRF---ALNQDSSLTTAFNVTI 128

Query: 129 EFKNPNEKLSIKYGKIEYDVTVGQATEFGRRELAGFTQGRRSTTTVKAE 174
             KNPNEK+ I Y             +     L  F QG  +TT +  E
Sbjct: 129 TAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVE 173

[Close]

BLAST of CSPI06G03690 vs. NCBI nr
Match: gi|449446257|ref|XP_004140888.1| (PREDICTED: uncharacterized protein LOC101205096 [Cucumis sativus])

HSP 1 Score: 497.3 bits (1279), Expect = 1.6e-137
Identity = 252/253 (99.60%), Postives = 252/253 (99.60%), Query Frame = 1


Query: 1   MADLPLKPPLQKPPGYKDHNTTATSSSSASTATHLPPPLRPKPRPPSSYKPKKRKRNCCR 60
           MADLPLKPPLQKPPGYKDHNTTATSSSSASTATHLPPPLRPKPRPPSSYKPKKRKRNCCR
Sbjct: 1   MADLPLKPPLQKPPGYKDHNTTATSSSSASTATHLPPPLRPKPRPPSSYKPKKRKRNCCR 60

Query: 61  TCCCIFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVSATPDGSFLDSQV 120
           TCCCIFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVS TPDGSFLDSQV
Sbjct: 61  TCCCIFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVSTTPDGSFLDSQV 120

Query: 121 SIRVEFKNPNEKLSIKYGKIEYDVTVGQATEFGRRELAGFTQGRRSTTTVKAEAAVKNKM 180
           SIRVEFKNPNEKLSIKYGKIEYDVTVGQATEFGRRELAGFTQGRRSTTTVKAEAAVKNKM
Sbjct: 121 SIRVEFKNPNEKLSIKYGKIEYDVTVGQATEFGRRELAGFTQGRRSTTTVKAEAAVKNKM 180

Query: 181 LAVEDGGRLLSKFQSKALEVKVEAETEVGVVVQGWGLGPITVKLDCESKLKNIDGGDMPT 240
           LAVEDGGRLLSKFQSKALEVKVEAETEVGVVVQGWGLGPITVKLDCESKLKNIDGGDMPT
Sbjct: 181 LAVEDGGRLLSKFQSKALEVKVEAETEVGVVVQGWGLGPITVKLDCESKLKNIDGGDMPT 240

Query: 241 CNINLLRWINIRG 254
           CNINLLRWINIRG
Sbjct: 241 CNINLLRWINIRG 253

[Close]

BLAST of CSPI06G03690 vs. NCBI nr
Match: gi|659089922|ref|XP_008445748.1| (PREDICTED: uncharacterized protein LOC103488682 [Cucumis melo])

HSP 1 Score: 463.8 bits (1192), Expect = 2.0e-127
Identity = 234/253 (92.49%), Postives = 243/253 (96.05%), Query Frame = 1


Query: 1   MADLPLKPPLQKPPGYKDHNTTATSSSSASTATHLPPPLRPKPRPPSSYKPKKRKRNCCR 60
           MADLP+KPPLQKPPGYKDH+T ATSSSSAST THLPPP R KPR PSSYKPKKRKRNCCR
Sbjct: 1   MADLPMKPPLQKPPGYKDHHTAATSSSSASTVTHLPPPPRSKPRLPSSYKPKKRKRNCCR 60

Query: 61  TCCCIFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVSATPDGSFLDSQV 120
           TCCCIFCFLILFLIVVAALALALFYL+YDPKLPVFHLLAFRIS+FKVSATPDGSFLD+QV
Sbjct: 61  TCCCIFCFLILFLIVVAALALALFYLIYDPKLPVFHLLAFRISTFKVSATPDGSFLDAQV 120

Query: 121 SIRVEFKNPNEKLSIKYGKIEYDVTVGQATEFGRRELAGFTQGRRSTTTVKAEAAVKNKM 180
           SIRVEFKNPN+KLSIKYGKIEYDV VGQATEFGRRELAGFTQ RRSTTTVKAEAAVKNKM
Sbjct: 121 SIRVEFKNPNDKLSIKYGKIEYDVMVGQATEFGRRELAGFTQDRRSTTTVKAEAAVKNKM 180

Query: 181 LAVEDGGRLLSKFQSKALEVKVEAETEVGVVVQGWGLGPITVKLDCESKLKNIDGGDMPT 240
           LAVEDG RLLSKFQSKALEVKVEAET VGVV+QGWGLGPITVKLDCE+KLKNI+GGDMP 
Sbjct: 181 LAVEDGARLLSKFQSKALEVKVEAETAVGVVIQGWGLGPITVKLDCETKLKNIEGGDMPI 240

Query: 241 CNINLLRWINIRG 254
           CNINLLRWINIRG
Sbjct: 241 CNINLLRWINIRG 253

[Close]

BLAST of CSPI06G03690 vs. NCBI nr
Match: gi|702333839|ref|XP_010055051.1| (PREDICTED: protein YLS9-like [Eucalyptus grandis])

HSP 1 Score: 216.5 bits (550), Expect = 5.5e-53
Identity = 115/254 (45.28%), Postives = 163/254 (64.17%), Query Frame = 1


Query: 1   MADLPLKPPLQKPPGYKDHNTTATSSSSASTATHLPP--PLRPKPRPPSSYKPKKRKRNC 60
           MA+ P KP LQKPPGY+D           S     PP  P R    PPS Y P+K++R+C
Sbjct: 1   MAEPPQKPMLQKPPGYRD----------PSVVVQQPPTQPYRKPVMPPSMY-PRKKRRSC 60

Query: 61  CRTCCCIFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVSATPDGSFLDS 120
           CR+CCC  C LI  ++ V  LA AL YL + PK+PVFHL +FRI  F V+A PDG++L +
Sbjct: 61  CRSCCCCLCVLIFLILCVLILAGALSYLWFGPKIPVFHLQSFRIPRFNVTAKPDGTYLKA 120

Query: 121 QVSIRVEFKNPNEKLSIKYGKIEYDVTVGQ--ATEFGRRELAGFTQGRRSTTTVKAEAAV 180
           Q  +RVE KNPN+KL + YG  + D+++G+    E G   L GFTQG+++ T++K    V
Sbjct: 121 QTVLRVEVKNPNQKLGLYYGGTDVDISLGRGGGIELGSDSLPGFTQGKKNVTSLKVTTEV 180

Query: 181 KNKMLAVEDGGRLLSKFQSKALEVKVEAETEVGVVVQGWGLGPITVKLDC-ESKLKNIDG 240
           +++++    G  L S ++SK+L VKV+  T VG ++QGW +G + V ++C E  +K ++G
Sbjct: 181 RDELVEDGAGAELRSGYRSKSLVVKVKVRTSVGAIIQGWKVGRVRVNVECGEVAMKEVEG 240

Query: 241 GDMPTCNINLLRWI 250
           G+MP C INLLRWI
Sbjct: 241 GEMPKCKINLLRWI 243

[Close]

BLAST of CSPI06G03690 vs. NCBI nr
Match: gi|590721513|ref|XP_007051635.1| (Late embryogenesis abundant hydroxyproline-rich glycoprotein family, putative [Theobroma cacao])

HSP 1 Score: 214.9 bits (546), Expect = 1.6e-52
Identity = 117/252 (46.43%), Postives = 161/252 (63.89%), Query Frame = 1


Query: 1   MADLPLKPPLQKPPGYKDHNTTATSSSSASTATHLPPPLRPKPRPPSSYKPKKRKRNCCR 60
           M + PLKP LQKPPGYKD +  A            PPP   KP  P S+ PKKR+  CCR
Sbjct: 1   MPEPPLKPVLQKPPGYKDPSAPAVKPGFR------PPPR--KPVLPPSFHPKKRRGGCCR 60

Query: 61  TCCCIFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVSATPDGSFLDSQV 120
            CCC FC   L LI++  +  A+FYL +DPKLP FH+ + RIS F V+  PDG++LD+Q 
Sbjct: 61  VCCCCFCIFFLILILLLLICGAVFYLWFDPKLPGFHVQSVRISRFNVTNKPDGTYLDAQT 120

Query: 121 SIRVEFKNPNEKLSIKYGKIEYDVTVGQA---TEFGRRELAGFTQGRRSTTTVKAEAAVK 180
           + R+E KNPN K++  YG  E DV+VG+    TE G   + GFT G+++TT++K E  V 
Sbjct: 121 TTRLEVKNPNAKMTYYYGNTEVDVSVGEGGDETELGTTTVHGFTMGKQNTTSLKVETKVI 180

Query: 181 NKMLAVEDGGRLLSKFQSKALEVKVEAETEVGVVVQGWGLGPITVKLDCES-KLKNIDGG 240
           NK++    G RL ++++SK+L V VEA T++G+ V G  +G + V + C+   LK +DGG
Sbjct: 181 NKLVDDGVGTRLQARYRSKSLRVSVEARTKIGLGVAGLKIGMVGVTVKCDGIALKRLDGG 240

Query: 241 DMPTCNINLLRW 249
           DMP C IN+L+W
Sbjct: 241 DMPKCVINMLKW 244

[Close]

BLAST of CSPI06G03690 vs. NCBI nr
Match: gi|703148826|ref|XP_010109444.1| (hypothetical protein L484_003064 [Morus notabilis])

HSP 1 Score: 211.8 bits (538), Expect = 1.4e-51
Identity = 117/253 (46.25%), Postives = 164/253 (64.82%), Query Frame = 1


Query: 1   MADLPLKPP-LQKPPGYKDHNTTATSSSSASTATHLPPPLRPKPRPPSSYKPKKRKRNCC 60
           MA+ PLKPP LQKPPGY+D          A+    +  P + KP  P+S+ P+KR+RN C
Sbjct: 1   MAEQPLKPPPLQKPPGYRD---------PAAPGKPVARPPQRKPVLPASFHPRKRRRNWC 60

Query: 61  RTCCCIFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVSATPDGSFLDSQ 120
           RTCCC     +L L +  A+A  +FYL ++PKLPVFHL + RI  F V+  PDG++LD+ 
Sbjct: 61  RTCCCFVFVFLLLLTLAVAIAGGIFYLWFEPKLPVFHLQSLRIPQFNVTVKPDGTYLDAG 120

Query: 121 VSIRVEFKNPNEKLSIKYGKIEYDVTVG--QATEFGRRELAGFTQGRRSTTTVKAEAAVK 180
              R+E KNPN KL + YG    +V+VG  +  E GR++L GFTQG+ +TT++K E  VK
Sbjct: 121 TVTRIEVKNPNGKLELYYGGTHVEVSVGEDEDAELGRKDLEGFTQGKENTTSLKVETTVK 180

Query: 181 NKMLAVEDGGRLLSKFQSKALEVKVEAETEVGVVVQGWGLGPITVKLDCES-KLKNIDGG 240
           N+++    G RL S ++SK L VK+EA+T VG +VQG  +G + V + C    LK +D G
Sbjct: 181 NQLVDDGLGKRLKSGYKSKDLVVKIEAKTSVGYIVQGVKIGTVEVGVLCGGVSLKKLDSG 240

Query: 241 DMPTCNINLLRWI 250
           DMP C+I+LL+W+
Sbjct: 241 DMPKCSIDLLKWV 244

The following BLAST results are available for this feature:

BLAST of CSPI06G03690 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI06G03690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCD8_CUCSA	1.1e-137	99.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G042460 PE=4 SV=1	[more]
A0A061DTS6_THECC	1.1e-52	46.43	Late embryogenesis abundant hydroxyproline-rich glycoprotein family, putative OS...	[more]
W9SAG5_9ROSA	9.4e-52	46.25	Uncharacterized protein OS=Morus notabilis GN=L484_003064 PE=4 SV=1	[more]
A0A0B0NJM7_GOSAR	5.7e-49	43.53	D-alanine--poly (Phosphoribitol) ligase subunit 1 OS=Gossypium arboreum GN=F383_...	[more]
A0A0D2QQD3_GOSRA	1.7e-48	42.75	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G105400 PE=4 SV=1	[more]

BLAST of CSPI06G03690 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46300.1	1.3e-47	40.38	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT4G01110.1	2.6e-29	35.02	unknown protein	[more]
AT1G01453.2	5.0e-28	32.81	unknown protein	[more]
AT1G17620.1	4.5e-13	25.55	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT1G65690.1	1.8e-09	28.99	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]

BLAST of CSPI06G03690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446257\|ref\|XP_004140888.1\|	1.6e-137	99.60	PREDICTED: uncharacterized protein LOC101205096 [Cucumis sativus]	[more]
gi\|659089922\|ref\|XP_008445748.1\|	2.0e-127	92.49	PREDICTED: uncharacterized protein LOC103488682 [Cucumis melo]	[more]
gi\|702333839\|ref\|XP_010055051.1\|	5.5e-53	45.28	PREDICTED: protein YLS9-like [Eucalyptus grandis]	[more]
gi\|590721513\|ref\|XP_007051635.1\|	1.6e-52	46.43	Late embryogenesis abundant hydroxyproline-rich glycoprotein family, putative [T...	[more]
gi\|703148826\|ref\|XP_010109444.1\|	1.4e-51	46.25	hypothetical protein L484_003064 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G03690.1	CSPI06G03690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 124..227 score: 9.9
None	No IPR available	PANTHER	PTHR31234	FAMILY NOT NAMED	coord: 5..252 score: 9.0
None	No IPR available	PANTHER	PTHR31234:SF12	LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN	coord: 5..252 score: 9.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G03690	Csa6G042460	Cucumber (Chinese Long) v2	cpicuB314
CSPI06G03690	MELO3C011673	Melon (DHL92) v3.5.1	cpimeB475
CSPI06G03690	MELO3C029922.2	Melon (DHL92) v3.6.1	cpimedB464
CSPI06G03690	CsaV3_6G003970	Cucumber (Chinese Long) v3	cpicucB364
CSPI06G03690	Bhi04G001613	Wax gourd	cpiwgoB595
CSPI06G03690	Cucsa.364900	Cucumber (Gy14) v1	cgycpiB540
CSPI06G03690	CsGy6G003660	Cucumber (Gy14) v2	cgybcpiB288

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G03690	Watermelon (97103) v2	cpiwmbB531