CSPI06G03220 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G03220
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 2820194 .. 2820406 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGGAGTTGTTTTAAGGAAACAGAGGAAAGACGAAAATTTCGAACATCGGAAACACGAAAAGATGAGCAAAGAAAATCAATGGTTTCAGAAGAAAACGGCGAAAACCCCTTTGCTCCATGGGGAGAGGCTGACGATTTTGCGATTAAAATGGAAGAAGAAGAAAGAAGAGGAACTTACAAGAAGTAAAGGGAGAAGCGAAATGGTGTAA

mRNA sequence

ATGGATGGAGTTGTTTTAAGGAAACAGAGGAAAGACGAAAATTTCGAACATCGGAAACACGAAAAGATGAGCAAAGAAAATCAATGGTTTCAGAAGAAAACGGCGAAAACCCCTTTGCTCCATGGGGAGAGGCTGACGATTTTGCGATTAAAATGGAAGAAGAAGAAAGAAGAGGAACTTACAAGAAGTAAAGGGAGAAGCGAAATGGTGTAA

Coding sequence (CDS)

ATGGATGGAGTTGTTTTAAGGAAACAGAGGAAAGACGAAAATTTCGAACATCGGAAACACGAAAAGATGAGCAAAGAAAATCAATGGTTTCAGAAGAAAACGGCGAAAACCCCTTTGCTCCATGGGGAGAGGCTGACGATTTTGCGATTAAAATGGAAGAAGAAGAAAGAAGAGGAACTTACAAGAAGTAAAGGGAGAAGCGAAATGGTGTAA
Homology
[Close]
BLAST of CSPI06G03220 vs. TrEMBL
Match: A0A0A0KC73_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G039530 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.2e-30
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1 

Query: 1  MDGVVLRKQRKDENFEHRKHEKMSKENQWFQKKTAKTPLLHGERLTILRLKWKKKKEEEL 60
          MDGVVLRKQRKDENFEHRKHEKMSKENQWFQKKTAKTPLLHGERLTILRLKWKKKKEEEL
Sbjct: 1  MDGVVLRKQRKDENFEHRKHEKMSKENQWFQKKTAKTPLLHGERLTILRLKWKKKKEEEL 60

Query: 61 TRSKGRSEMV 71
          TRSKGRSEMV
Sbjct: 61 TRSKGRSEMV 70

[Close]
BLAST of CSPI06G03220 vs. NCBI nr
Match: gi|700190758|gb|KGN45962.1| (hypothetical protein Csa_6G039530 [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 3.1e-30
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1 

Query: 1  MDGVVLRKQRKDENFEHRKHEKMSKENQWFQKKTAKTPLLHGERLTILRLKWKKKKEEEL 60
          MDGVVLRKQRKDENFEHRKHEKMSKENQWFQKKTAKTPLLHGERLTILRLKWKKKKEEEL
Sbjct: 1  MDGVVLRKQRKDENFEHRKHEKMSKENQWFQKKTAKTPLLHGERLTILRLKWKKKKEEEL 60

Query: 61 TRSKGRSEMV 71
          TRSKGRSEMV
Sbjct: 61 TRSKGRSEMV 70

The following BLAST results are available for this feature:
BLAST of CSPI06G03220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI06G03220 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KC73_CUCSA2.2e-30100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G039530 PE=4 SV=1[more]
BLAST of CSPI06G03220 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI06G03220 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190758|gb|KGN45962.1|3.1e-30100.00hypothetical protein Csa_6G039530 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G03220.1CSPI06G03220.1mRNA