CSPI06G02810 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G02810
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 2251917 .. 2252635 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTACTCACTAGAGTTCGGACGGAGAACTAGTGGGTGGCTGGGCTTGCTCGAATTGAAGACGTGCAACTAAAAGTGTACAAATATGGGTTGAAGCCGCATAACCCGGACTACCCAACCCATATTATAAGGGTTGGGTTGGGTTAATTTTTTTTTATATTTTTTCGGGTTGGGTTGGGTCTCGAGTTGGAGGGTTGAAAATTTTGGTTCAACCCAACCCGAATTAAGATAACATATAAATAAACAAATAAGATGTATATATTATTTTAATAAAAACAAATTAGAGGTATATAAATTTTGAATTTATTGTATGAAAGTTTGAATTATGTATGTTTGAAATTTAAATGTAACAATTTCAAACTTTTATAACCATTAGAAACTAGAAAATGAGAAATTTTTTTTTAAATATTAATATATACAACCCAACAACCCAACCTAACCCATATTTTATGAGTTGGATTAGGTTAAAAACTTAATTCGTGTTATTCGAGTTGTCAATCCAAATAACTCGAAAACATGAGTTGGGTCGAGAATGTCTCCTTACCCAACCCGATTTCACCCCTATGTGCAACACACACAACAAGCTTCAGATGGGTTTCGACTAGGCTTCGTTGAAGCGTGGGCGCTTACAGCAAGGAGGATGTGACAGACGGAGATGTCGGAGAAAGTGGGGCAACAACGTTTAGGGAGGAAGGAGATGAAGAAGATGATGAATAG

mRNA sequence

ATGAAGTACTCACTAGAGTTCGGACGGAGAACTAGTGGGTGGCTGGGCTTGCTCGAATTGAAGACCGTGGGCGCTTACAGCAAGGAGGATGTGACAGACGGAGATGTCGGAGAAAGTGGGGCAACAACGTTTAGGGAGGAAGGAGATGAAGAAGATGATGAATAG

Coding sequence (CDS)

ATGAAGTACTCACTAGAGTTCGGACGGAGAACTAGTGGGTGGCTGGGCTTGCTCGAATTGAAGACCGTGGGCGCTTACAGCAAGGAGGATGTGACAGACGGAGATGTCGGAGAAAGTGGGGCAACAACGTTTAGGGAGGAAGGAGATGAAGAAGATGATGAATAG
Homology
[Close]
BLAST of CSPI06G02810 vs. TrEMBL
Match: A0A0A0K825_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G022270 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.4e-16
Identity = 49/54 (90.74%), Postives = 49/54 (90.74%), Query Frame = 1 

Query: 1  MKYSLEFGRRTSGWLGLLELKTVGAYSKEDVTDGDVGESGATTFREEGDEEDDE 55
          MKYSLEFGRRTSG LGLLELKTVGAYSKEDVTD DVGESGA  FREE DEEDDE
Sbjct: 1  MKYSLEFGRRTSGRLGLLELKTVGAYSKEDVTDEDVGESGAIAFREEEDEEDDE 54

[Close]
BLAST of CSPI06G02810 vs. NCBI nr
Match: gi|700190711|gb|KGN45915.1| (hypothetical protein Csa_6G022270 [Cucumis sativus])

HSP 1 Score: 92.8 bits (229), Expect = 2.0e-16
Identity = 49/54 (90.74%), Postives = 49/54 (90.74%), Query Frame = 1 

Query: 1  MKYSLEFGRRTSGWLGLLELKTVGAYSKEDVTDGDVGESGATTFREEGDEEDDE 55
          MKYSLEFGRRTSG LGLLELKTVGAYSKEDVTD DVGESGA  FREE DEEDDE
Sbjct: 1  MKYSLEFGRRTSGRLGLLELKTVGAYSKEDVTDEDVGESGAIAFREEEDEEDDE 54

The following BLAST results are available for this feature:
BLAST of CSPI06G02810 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI06G02810 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K825_CUCSA1.4e-1690.74Uncharacterized protein OS=Cucumis sativus GN=Csa_6G022270 PE=4 SV=1[more]
BLAST of CSPI06G02810 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI06G02810 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190711|gb|KGN45915.1|2.0e-1690.74hypothetical protein Csa_6G022270 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G02810.1CSPI06G02810.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G02810Csa6G022270Cucumber (Chinese Long) v2cpicuB314
CSPI06G02810CsaV3_6G003060Cucumber (Chinese Long) v3cpicucB364
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G02810Bottle gourd (USVL1VR-Ls)cpilsiB483
CSPI06G02810Melon (DHL92) v3.6.1cpimedB464
CSPI06G02810Cucumber (Gy14) v2cgybcpiB288
CSPI06G02810Silver-seed gourdcarcpiB0254
CSPI06G02810Watermelon (97103) v2cpiwmbB516
CSPI06G02810Wax gourdcpiwgoB586
CSPI06G02810Cucumber (Gy14) v1cgycpiB540
CSPI06G02810Cucurbita moschata (Rifu)cmocpiB901
CSPI06G02810Cucurbita moschata (Rifu)cmocpiB910
CSPI06G02810Melon (DHL92) v3.5.1cpimeB468
CSPI06G02810Melon (DHL92) v3.5.1cpimeB479
CSPI06G02810Watermelon (Charleston Gray)cpiwcgB530
CSPI06G02810Watermelon (97103) v1cpiwmB491