CSPI06G02380 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G02380
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
Description60S ribosomal protein L3
LocationChr6 : 1759093 .. 1762053 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGATATCTAGGGTTTTTCATCCGCCTTGTGCAGTTGCAGTAGCCGCAGGGGAAGTACGGGTTCTTTCTTTCTCCTTCGCTCTTTGTTTCTTCTTAACCCTAATTTATCTCTGATTTTGAGTGGTTTTGTCCATTTTTGCATTGGACCTTGTTCCATGTTTCTACTTTGAAGTTGATATCTTTCTGTTTCTACTCATTTTCGCGTTTGGTTTATGTGAAGGTTTAGTAAATGCGGTTGCACTTGAACATATTCTGTGGTTATTTTGTTATTGAATGATCTTGCACTCTGATTTGTAGAGATGCAGCCTAGCAACATTTTGGATTTTAAAAATTGATTTTTGTTATAAGTAATTGCCTATTCTGAGTTAGATATACTTGTAGGAGATGGTTACTTAAGATAATAGTTAAAAAAAGTTCCATCTTTTGATTGTTTAATTGTGATTGTGGTCTATTTCTTCTCTTTCTTATAGTGTTTGGTATTGATAAATTATTTTCCTTGATATTGAATAAATGTTTGTTGGTTATGTGAAGGAAGAAGATGTCTCACAGGAAATTTGAGCACCCAAGGCACGGGTCCCTTGGATTTCTTCCAAGAAAACGAGCAGCTCGTCACCGTGGAAAAGGTTCTTTTTCTTTTACGTTTTGACTAGTTTAACGTATTATGTTTGAACGTAAGTGTATATTGATTAAAACAACCAAAGAGACGTATGATATTTCGTAGATGAGTGAAATTTTTAATTATATGATTGTAACACGATGACAGATATTTCGTATATTGATTTTACAACTTTCCCAGTTGAGACATGATCAACAATCAACATTTATGTATTTTAGTATTGTATAGTGAGAACTGAGCTTTTCTTAATTTGTTTTCCAATCTGCAGTGAAGGCTTTTCCAAAGGATGACGCAACCAAGCCTTGCAGGTTGACTGCCTTTTTGGGTTACAAGGCTGGAATGACCCACATTGTCAGGGAGGTTGAGAAGCCAGGATCTAGTACGTGTTCTTTGAATTCACTAATTTATTTGGATGACCTTGTTGTGTGCATTTCATTAACTTTTATGAAGCTTGCAATTAATTCTTACATTTGGTTTCTATTTTGTGTTATTTGTAGAACTTCACAAGAAGGAGACATGTGAGCCTGTGACAATCATTGAGACCCCACCAATGGTGATTGTTGGTGTTGTTGGATATGTAAAGACCCCACGTGGCCTCCGCACTTTGGGCACTGTATGGGCTCAGCATTTGAGTGAGGAAGTTAGGAGGAGGTTCTATAAGAACTGGTGCAAATCAAAGAAGAAGGCTTTCGCTAAGTACTCTAAACAATATGAAACTGATGAGGGAAAGAAGACCATCCAGGAGAAGCTTGAGAAGCTGAAGAAATATGCATCTGTGATCCGTGTTTTGGCTCATACTCAGGTAATGAAGTGGACGTAAATTCAACTGAGTATCCTATATTTATGTAGAAATAGTATATTAGATTAATTTCAGAATGAACATATCCGTTTTCAGTTTTCATTATAAGAACTCTTTATTCTTGGTCTATTTGAATTTGTTGGTTAGTCTATTTGTGCAGGCAACAGATCTATATATTTCTCTTGCTCGTCTAAATCCAATTGTCCTTGAATATGAAGTCTGTTGGTAGACTAATTTTTCTTGCTGGTTACTCTATTAAAGCTGTTGAAGATATCATTGGTTTTTCTGTTCTCGTCTTATTTAAGGATATCAACCTACTGATCTGTATTATGTTTTAATGTTTTAGAACATAGTGCACTTTAGTAATGTGCTTGGTTTTGTTATCTGGTGAGGTTTCATATTGTTTACTAACTCGGGCAAGTTGTTTCACCAAGATGAATTGTTTTGTACTTATTGTGCACACTAGTAATGTTACTTACGTTTAAAGGTTTATTACTTTAATGCATTGCTTTGACTTTTGTAGATCACCAAGATGAAGGGATTGAAGCAAAAGAAAGCACACCTGATGGAGATCCAGGTCAATGGTGGTTCAATTGCTCAGAAGGTGGACTATGCCTACGGTTTCTTTGAGAAGCAAGTTCCAGTAGAAGCTGTTTTCCAGAAAGATGAGATGATTGACCTTATTGGTGTGACCAAGGGTAAAGGTTATGAAGGTGTTGTCACTCGTTGGGGTGTTACACGTCTCCCTCGTAAGACTCACAGGGGTCTTAGGAAGGTGGCTTGTATTGGTGCATGGCATCCTGCTAGAGTGTCATTCACTGTTGCCAGGGCTGGTCAGAACGGTTACCATCACCGAACTGAAATGAACAAAAAGGTCTACAAAATTGGAAAGACGGGGCAGGAATCGCACACTGCTATTACTGAATTCGACAGGTTAGCTTGCTACATTAGGTTGAATAGCGATTTCAAAGTAGCTCTCGTATTTTGTCTCTTATTTTGCTTCCTTTGTTTGAAACAGGACTGAGAAGGACATTACTCCCATGGGTGGTTTCCCTCACTACGGTATCGTGAAGAGTGACTACTTGATGATTAAGGGAGGTTGTGTTGGACCCAAGAAGAGGGTCATCACCCTTCGTCAGTCTCTTCTCAAACAAACTTCTCGTGTGGCTCTTGAGGAGATCAAACTTAAGTTCATCGATACATCCTCCAAGTTTGGCCATGGACGCTTCCAGACAACACAGGAGAAACAGAAGTTCTTTGGTCGCCTCAAGGCTTAGATTTAACTGCCCTCCTTTATCCATGGTTGTTTTTTTGGTTCCTATCATCCCTGAATTTTTGTTGTCTGTCTTTTATTTCGAGTATTTTGAGTAGTGGAGTTTTTGTTATTAAATTTAAATTTTGAACTTATAGTTTCCTATTAATGAGACTTGATTTCTCCTTTTACAATTTGTGTCTTCCTCTTATTTTAATCATAACAACCGATATGATGTCTACGTGAGTCATTTTTAGTATTTTTAAACTCTCCTTAAAGGATTAAGATTTTGACG

mRNA sequence

ATGTCTCACAGGAAATTTGAGCACCCAAGGCACGGGTCCCTTGGATTTCTTCCAAGAAAACGAGCAGCTCGTCACCGTGGAAAAGTGAAGGCTTTTCCAAAGGATGACGCAACCAAGCCTTGCAGGTTGACTGCCTTTTTGGGTTACAAGGCTGGAATGACCCACATTGTCAGGGAGGTTGAGAAGCCAGGATCTAAACTTCACAAGAAGGAGACATGTGAGCCTGTGACAATCATTGAGACCCCACCAATGGTGATTGTTGGTGTTGTTGGATATGTAAAGACCCCACGTGGCCTCCGCACTTTGGGCACTGTATGGGCTCAGCATTTGAGTGAGGAAGTTAGGAGGAGGTTCTATAAGAACTGGTGCAAATCAAAGAAGAAGGCTTTCGCTAAGTACTCTAAACAATATGAAACTGATGAGGGAAAGAAGACCATCCAGGAGAAGCTTGAGAAGCTGAAGAAATATGCATCTGTGATCCGTGTTTTGGCTCATACTCAGATCACCAAGATGAAGGGATTGAAGCAAAAGAAAGCACACCTGATGGAGATCCAGGTCAATGGTGGTTCAATTGCTCAGAAGGTGGACTATGCCTACGGTTTCTTTGAGAAGCAAGTTCCAGTAGAAGCTGTTTTCCAGAAAGATGAGATGATTGACCTTATTGGTGTGACCAAGGGTAAAGGTTATGAAGGTGTTGTCACTCGTTGGGGTGTTACACGTCTCCCTCGTAAGACTCACAGGGGTCTTAGGAAGGTGGCTTGTATTGGTGCATGGCATCCTGCTAGAGTGTCATTCACTGTTGCCAGGGCTGGTCAGAACGGTTACCATCACCGAACTGAAATGAACAAAAAGGTCTACAAAATTGGAAAGACGGGGCAGGAATCGCACACTGCTATTACTGAATTCGACAGGACTGAGAAGGACATTACTCCCATGGGTGGTTTCCCTCACTACGGTATCGTGAAGAGTGACTACTTGATGATTAAGGGAGGTTGTGTTGGACCCAAGAAGAGGGTCATCACCCTTCGTCAGTCTCTTCTCAAACAAACTTCTCGTGTGGCTCTTGAGGAGATCAAACTTAAGTTCATCGATACATCCTCCAAGTTTGGCCATGGACGCTTCCAGACAACACAGGAGAAACAGAAGTTCTTTGGTCGCCTCAAGGCTTAG

Coding sequence (CDS)

ATGTCTCACAGGAAATTTGAGCACCCAAGGCACGGGTCCCTTGGATTTCTTCCAAGAAAACGAGCAGCTCGTCACCGTGGAAAAGTGAAGGCTTTTCCAAAGGATGACGCAACCAAGCCTTGCAGGTTGACTGCCTTTTTGGGTTACAAGGCTGGAATGACCCACATTGTCAGGGAGGTTGAGAAGCCAGGATCTAAACTTCACAAGAAGGAGACATGTGAGCCTGTGACAATCATTGAGACCCCACCAATGGTGATTGTTGGTGTTGTTGGATATGTAAAGACCCCACGTGGCCTCCGCACTTTGGGCACTGTATGGGCTCAGCATTTGAGTGAGGAAGTTAGGAGGAGGTTCTATAAGAACTGGTGCAAATCAAAGAAGAAGGCTTTCGCTAAGTACTCTAAACAATATGAAACTGATGAGGGAAAGAAGACCATCCAGGAGAAGCTTGAGAAGCTGAAGAAATATGCATCTGTGATCCGTGTTTTGGCTCATACTCAGATCACCAAGATGAAGGGATTGAAGCAAAAGAAAGCACACCTGATGGAGATCCAGGTCAATGGTGGTTCAATTGCTCAGAAGGTGGACTATGCCTACGGTTTCTTTGAGAAGCAAGTTCCAGTAGAAGCTGTTTTCCAGAAAGATGAGATGATTGACCTTATTGGTGTGACCAAGGGTAAAGGTTATGAAGGTGTTGTCACTCGTTGGGGTGTTACACGTCTCCCTCGTAAGACTCACAGGGGTCTTAGGAAGGTGGCTTGTATTGGTGCATGGCATCCTGCTAGAGTGTCATTCACTGTTGCCAGGGCTGGTCAGAACGGTTACCATCACCGAACTGAAATGAACAAAAAGGTCTACAAAATTGGAAAGACGGGGCAGGAATCGCACACTGCTATTACTGAATTCGACAGGACTGAGAAGGACATTACTCCCATGGGTGGTTTCCCTCACTACGGTATCGTGAAGAGTGACTACTTGATGATTAAGGGAGGTTGTGTTGGACCCAAGAAGAGGGTCATCACCCTTCGTCAGTCTCTTCTCAAACAAACTTCTCGTGTGGCTCTTGAGGAGATCAAACTTAAGTTCATCGATACATCCTCCAAGTTTGGCCATGGACGCTTCCAGACAACACAGGAGAAACAGAAGTTCTTTGGTCGCCTCAAGGCTTAG
Homology
[Close]
BLAST of CSPI06G02380 vs. Swiss-Prot
Match: RL3_ORYSJ (60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2)

HSP 1 Score: 709.1 bits (1829), Expect = 2.6e-203
Identity = 338/389 (86.89%), Postives = 370/389 (95.12%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKR++RHRGKVK+FPKDD +KPC LT+F+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETPP+VIVG+V YVKTPRGLR+L +VWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAF KY+ +Y++D GKK IQ +LEK+KKYAS++RV+AHTQI KMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQ+NGG+IA KVDY Y FFEK++PV+AVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYKIGK+GQESH A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKDITPMGGFPHYG+VK DYLMIKG CVGPKKRV+TLRQSLLKQTSR+ALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 390
           KFIDTSSKFGHGRFQTT EKQ+FFG+LKA
Sbjct: 361 KFIDTSSKFGHGRFQTTDEKQRFFGKLKA 389

[Close]
BLAST of CSPI06G02380 vs. Swiss-Prot
Match: RL32_ARATH (60S ribosomal protein L3-2 OS=Arabidopsis thaliana GN=ARP2 PE=2 SV=4)

HSP 1 Score: 695.3 bits (1793), Expect = 3.9e-199
Identity = 334/386 (86.53%), Postives = 365/386 (94.56%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD TKPCRLT+FLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETPPMV+VGVVGYVKTPRGLR+L TVWAQHLSEE+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAF +YSK++ET+EGKK IQ +LEK+KKY SVIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           L EIQ+NGG IA+KVDYA   FEKQVPV+A+FQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVY++GK GQE+H+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEKDITPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQ+LLKQTSR+A+EEIKL
Sbjct: 301 EYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGR 387
           KFID +S  GHGRFQT+QEK KF+GR
Sbjct: 361 KFIDAASNGGHGRFQTSQEKAKFYGR 386

[Close]
BLAST of CSPI06G02380 vs. Swiss-Prot
Match: RL31_ARATH (60S ribosomal protein L3-1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=5)

HSP 1 Score: 691.0 bits (1782), Expect = 7.3e-198
Identity = 329/387 (85.01%), Postives = 364/387 (94.06%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD TKPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAF  Y+KQY++++GKK IQ +LEK+KKYA+VIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGG+IAQKVD+AY FFEKQ+P+EAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y++GK G E+HTA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEKD+TPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQSLL QTSR+ALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRL 388
           KFIDT+S FGHGRFQT+ EK +F+ R+
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]
BLAST of CSPI06G02380 vs. Swiss-Prot
Match: RL3_MOUSE (60S ribosomal protein L3 OS=Mus musculus GN=Rpl3 PE=1 SV=3)

HSP 1 Score: 544.3 bits (1401), Expect = 1.1e-153
Identity = 267/394 (67.77%), Postives = 329/394 (83.50%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKF  PRHGSLGFLPRKR++RHRGKVK+FPKDDA+KP  LTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           ++PGSK++KKE  E VTI+ETPPMV+VG+VGYV+TPRGLRT  TV+A+H+S+E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAF KY K+++ D GKK +++    +KKY  VIR++AHTQ+ ++  L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQM-RLLPLRQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG++A+K+D+A    E+QVPV  VF +DEMID+IGVTKGKGY+GV +RW   +
Sbjct: 181 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIG-----KTGQ-E 300
           LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YKIG     K G+  
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 300

Query: 301 SHTAITEFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVA 360
            + A T++D ++K I P+GGF HYG V +D++M+KG  VG KKRV+TLR+SLL QT R A
Sbjct: 301 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 360

Query: 361 LEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLK 389
           LE+I LKFIDT+SKFGHGRFQT +EK+ F G LK
Sbjct: 361 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393

[Close]
BLAST of CSPI06G02380 vs. Swiss-Prot
Match: RL3_RAT (60S ribosomal protein L3 OS=Rattus norvegicus GN=Rpl3 PE=1 SV=3)

HSP 1 Score: 542.3 bits (1396), Expect = 4.2e-153
Identity = 266/394 (67.51%), Postives = 328/394 (83.25%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKF  PRHGSLGFLPRKR++RHRGKVK+FPKDD +KP  LTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           ++PGSK++KKE  E VTI+ETPPMV+VG+VGYV+TPRGLRT  TV+A+H+S+E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAF KY K+++ D GKK +++    +KKY  VIR++AHTQ+ ++  L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQM-RLLPLRQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG++A+K+D+A    E+QVPV  VF +DEMID+IGVTKGKGY+GV +RW   +
Sbjct: 181 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIG-----KTGQ-E 300
           LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YKIG     K G+  
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 300

Query: 301 SHTAITEFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVA 360
            + A T++D ++K I P+GGF HYG V +D++M+KG  VG KKRV+TLR+SLL QT R A
Sbjct: 301 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 360

Query: 361 LEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLK 389
           LE+I LKFIDT+SKFGHGRFQT +EK+ F G LK
Sbjct: 361 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393

[Close]
BLAST of CSPI06G02380 vs. TrEMBL
Match: A0A0A0KAJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014790 PE=3 SV=1)

HSP 1 Score: 785.4 bits (2027), Expect = 3.2e-224
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 390
           KFIDTSSKFGHGRFQTTQEKQKFFGRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389

[Close]
BLAST of CSPI06G02380 vs. TrEMBL
Match: W9S5Y9_9ROSA (60S ribosomal protein L3 OS=Morus notabilis GN=L484_004471 PE=3 SV=1)

HSP 1 Score: 743.4 bits (1918), Expect = 1.4e-211
Identity = 361/389 (92.80%), Postives = 379/389 (97.43%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD TKPC+LTAFLGYKAGMTHIVREV
Sbjct: 22  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCKLTAFLGYKAGMTHIVREV 81

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VT+IETPPMVIVGVVGYVKTPRGLRTL TVWAQHLSEEV+RRFYK
Sbjct: 82  EKPGSKLHKKETCEAVTVIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEEVKRRFYK 141

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAF KYSKQYE+DEGKK IQ +LEKLKKYA+VIRVLAHTQI KMKGLKQKKAH
Sbjct: 142 NWCKSKKKAFTKYSKQYESDEGKKNIQAQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 201

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG+IAQKVD+AYGFFEKQVPV+AVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 202 LMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 261

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GK GQESHTAIT
Sbjct: 262 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKAGQESHTAIT 321

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKDITP+GGFPHYG+VK D+L+IKG CVGPKKRV+TLRQSLLKQTSRVALEEIKL
Sbjct: 322 EFDRTEKDITPIGGFPHYGVVKDDFLLIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKL 381

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 390
           KFIDTSSKFGHGRFQTTQEKQKF+GRLKA
Sbjct: 382 KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 410

[Close]
BLAST of CSPI06G02380 vs. TrEMBL
Match: V4SJ48_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001454mg PE=3 SV=1)

HSP 1 Score: 741.9 bits (1914), Expect = 4.0e-211
Identity = 358/389 (92.03%), Postives = 379/389 (97.43%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDD +KPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETPPM++VGVVGYVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAF KYSKQYETDEGKK+IQ +LEK+KKYASV+RVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG+IA+KVDYAYGFFEKQ+PV+AVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GK GQESHT IT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKDITPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQSLLKQTSR+ALEEIK+
Sbjct: 301 EFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKI 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 390
           KFIDTSSKFGHGRFQTTQEKQK++GR+KA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKYYGRMKA 389

[Close]
BLAST of CSPI06G02380 vs. TrEMBL
Match: A0A059BT61_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02696 PE=3 SV=1)

HSP 1 Score: 741.5 bits (1913), Expect = 5.2e-211
Identity = 355/389 (91.26%), Postives = 379/389 (97.43%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDD TKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VT++ETPPMV+VGVVGYVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTVVETPPMVVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAF KYSKQYET++GKK IQ +LEK+KKYA+++RVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETEDGKKNIQAQLEKIKKYATIVRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG+IAQKVD+AYGFFEKQ+P++AVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GK GQESHTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKAGQESHTAIT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEK+ITPMGGFPHYG+VK DYLMIKG CVGPKKRV+TLRQSLLKQTSRVALE+IKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGLVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRVALEDIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 390
           KFIDTSSKFGHGRFQTTQEKQK++GRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKYYGRLKA 389

[Close]
BLAST of CSPI06G02380 vs. TrEMBL
Match: I3NMK3_HEVBR (60S ribosomal protein L3B OS=Hevea brasiliensis GN=RPL3B PE=2 SV=1)

HSP 1 Score: 740.7 bits (1911), Expect = 9.0e-211
Identity = 356/389 (91.52%), Postives = 378/389 (97.17%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD TKPC+LTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCKLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTI+ETPPMVIVGVVGYVKTPRGLRTL TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAF KYSKQYETD+GKK+IQ +LEK+KKYA V+RVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETDDGKKSIQAQLEKIKKYAHVVRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG+IAQKVD+AYGFFEKQ+P++AVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK GQESHTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGQESHTAIT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           ++DRTEKDITPMGGFPHYG+VK DY+MIKG CVGPKKRV+TLR+SLL QTSRVALEEIKL
Sbjct: 301 DYDRTEKDITPMGGFPHYGVVKDDYIMIKGCCVGPKKRVVTLRRSLLTQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 390
           KFIDTSSKFGHGRFQTTQEKQKFFGRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389

[Close]
BLAST of CSPI06G02380 vs. TAIR10
Match: AT1G61580.1 (AT1G61580.1 R-protein L3 B)

HSP 1 Score: 695.3 bits (1793), Expect = 2.2e-200
Identity = 334/386 (86.53%), Postives = 365/386 (94.56%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD TKPCRLT+FLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETPPMV+VGVVGYVKTPRGLR+L TVWAQHLSEE+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAF +YSK++ET+EGKK IQ +LEK+KKY SVIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           L EIQ+NGG IA+KVDYA   FEKQVPV+A+FQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVY++GK GQE+H+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEKDITPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQ+LLKQTSR+A+EEIKL
Sbjct: 301 EYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGR 387
           KFID +S  GHGRFQT+QEK KF+GR
Sbjct: 361 KFIDAASNGGHGRFQTSQEKAKFYGR 386

[Close]
BLAST of CSPI06G02380 vs. TAIR10
Match: AT1G43170.1 (AT1G43170.1 ribosomal protein 1)

HSP 1 Score: 691.0 bits (1782), Expect = 4.1e-199
Identity = 329/387 (85.01%), Postives = 364/387 (94.06%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD TKPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAF  Y+KQY++++GKK IQ +LEK+KKYA+VIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGG+IAQKVD+AY FFEKQ+P+EAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y++GK G E+HTA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEKD+TPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQSLL QTSR+ALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRL 388
           KFIDT+S FGHGRFQT+ EK +F+ R+
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]
BLAST of CSPI06G02380 vs. NCBI nr
Match: gi|778709790|ref|XP_011656458.1| (PREDICTED: 60S ribosomal protein L3 [Cucumis sativus])

HSP 1 Score: 785.4 bits (2027), Expect = 4.5e-224
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 390
           KFIDTSSKFGHGRFQTTQEKQKFFGRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389

[Close]
BLAST of CSPI06G02380 vs. NCBI nr
Match: gi|659126253|ref|XP_008463090.1| (PREDICTED: 60S ribosomal protein L3 [Cucumis melo])

HSP 1 Score: 785.0 bits (2026), Expect = 5.9e-224
Identity = 388/389 (99.74%), Postives = 389/389 (100.00%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKIGKTGQESHTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 390
           KFIDTSSKFGHGRFQTTQEKQKFFGRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389

[Close]
BLAST of CSPI06G02380 vs. NCBI nr
Match: gi|703138965|ref|XP_010106863.1| (60S ribosomal protein L3 [Morus notabilis])

HSP 1 Score: 743.4 bits (1918), Expect = 2.0e-211
Identity = 361/389 (92.80%), Postives = 379/389 (97.43%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD TKPC+LTAFLGYKAGMTHIVREV
Sbjct: 22  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCKLTAFLGYKAGMTHIVREV 81

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VT+IETPPMVIVGVVGYVKTPRGLRTL TVWAQHLSEEV+RRFYK
Sbjct: 82  EKPGSKLHKKETCEAVTVIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEEVKRRFYK 141

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAF KYSKQYE+DEGKK IQ +LEKLKKYA+VIRVLAHTQI KMKGLKQKKAH
Sbjct: 142 NWCKSKKKAFTKYSKQYESDEGKKNIQAQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 201

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG+IAQKVD+AYGFFEKQVPV+AVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 202 LMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 261

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GK GQESHTAIT
Sbjct: 262 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKAGQESHTAIT 321

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKDITP+GGFPHYG+VK D+L+IKG CVGPKKRV+TLRQSLLKQTSRVALEEIKL
Sbjct: 322 EFDRTEKDITPIGGFPHYGVVKDDFLLIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKL 381

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 390
           KFIDTSSKFGHGRFQTTQEKQKF+GRLKA
Sbjct: 382 KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 410

[Close]
BLAST of CSPI06G02380 vs. NCBI nr
Match: gi|567883859|ref|XP_006434488.1| (hypothetical protein CICLE_v10001454mg [Citrus clementina])

HSP 1 Score: 741.9 bits (1914), Expect = 5.8e-211
Identity = 358/389 (92.03%), Postives = 379/389 (97.43%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDD +KPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETPPM++VGVVGYVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAF KYSKQYETDEGKK+IQ +LEK+KKYASV+RVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG+IA+KVDYAYGFFEKQ+PV+AVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GK GQESHT IT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKDITPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQSLLKQTSR+ALEEIK+
Sbjct: 301 EFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKI 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 390
           KFIDTSSKFGHGRFQTTQEKQK++GR+KA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKYYGRMKA 389

[Close]
BLAST of CSPI06G02380 vs. NCBI nr
Match: gi|702373594|ref|XP_010062104.1| (PREDICTED: 60S ribosomal protein L3 [Eucalyptus grandis])

HSP 1 Score: 741.5 bits (1913), Expect = 7.5e-211
Identity = 355/389 (91.26%), Postives = 379/389 (97.43%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDD TKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VT++ETPPMV+VGVVGYVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTVVETPPMVVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAF KYSKQYET++GKK IQ +LEK+KKYA+++RVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETEDGKKNIQAQLEKIKKYATIVRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG+IAQKVD+AYGFFEKQ+P++AVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GK GQESHTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKAGQESHTAIT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEK+ITPMGGFPHYG+VK DYLMIKG CVGPKKRV+TLRQSLLKQTSRVALE+IKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGLVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRVALEDIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 390
           KFIDTSSKFGHGRFQTTQEKQK++GRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKYYGRLKA 389

The following BLAST results are available for this feature:
BLAST of CSPI06G02380 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL3_ORYSJ2.6e-20386.8960S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2[more]
RL32_ARATH3.9e-19986.5360S ribosomal protein L3-2 OS=Arabidopsis thaliana GN=ARP2 PE=2 SV=4[more]
RL31_ARATH7.3e-19885.0160S ribosomal protein L3-1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=5[more]
RL3_MOUSE1.1e-15367.7760S ribosomal protein L3 OS=Mus musculus GN=Rpl3 PE=1 SV=3[more]
RL3_RAT4.2e-15367.5160S ribosomal protein L3 OS=Rattus norvegicus GN=Rpl3 PE=1 SV=3[more]
BLAST of CSPI06G02380 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAJ9_CUCSA3.2e-224100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014790 PE=3 SV=1[more]
W9S5Y9_9ROSA1.4e-21192.8060S ribosomal protein L3 OS=Morus notabilis GN=L484_004471 PE=3 SV=1[more]
V4SJ48_9ROSI4.0e-21192.03Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001454mg PE=3 SV=1[more]
A0A059BT61_EUCGR5.2e-21191.26Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02696 PE=3 SV=1[more]
I3NMK3_HEVBR9.0e-21191.5260S ribosomal protein L3B OS=Hevea brasiliensis GN=RPL3B PE=2 SV=1[more]
BLAST of CSPI06G02380 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G61580.12.2e-20086.53 R-protein L3 B[more]
AT1G43170.14.1e-19985.01 ribosomal protein 1[more]
BLAST of CSPI06G02380 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778709790|ref|XP_011656458.1|4.5e-224100.00PREDICTED: 60S ribosomal protein L3 [Cucumis sativus][more]
gi|659126253|ref|XP_008463090.1|5.9e-22499.74PREDICTED: 60S ribosomal protein L3 [Cucumis melo][more]
gi|703138965|ref|XP_010106863.1|2.0e-21192.8060S ribosomal protein L3 [Morus notabilis][more]
gi|567883859|ref|XP_006434488.1|5.8e-21192.03hypothetical protein CICLE_v10001454mg [Citrus clementina][more]
gi|702373594|ref|XP_010062104.1|7.5e-21191.26PREDICTED: 60S ribosomal protein L3 [Eucalyptus grandis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000597Ribosomal_L3
IPR009000Transl_B-barrel_sf
IPR019926Ribosomal_L3_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G02380.1CSPI06G02380.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000597Ribosomal protein L3PFAMPF00297Ribosomal_L3coord: 1..370
score: 2.0E
IPR009000Translation protein, beta-barrel domainunknownSSF50447Translation proteinscoord: 4..370
score: 2.83E
IPR019926Ribosomal protein L3, conserved sitePROSITEPS00474RIBOSOMAL_L3coord: 212..235
scor
NoneNo IPR availableGENE3DG3DSA:2.40.30.10coord: 44..91
score: 9.0E-19coord: 233..370
score: 1.2
NoneNo IPR availableGENE3DG3DSA:3.30.1430.10coord: 92..208
score: 1.3
NoneNo IPR availablePANTHERPTHR1136360S RIBOSOMAL PROTEIN L3-RELATEDcoord: 1..388
score:
NoneNo IPR availablePANTHERPTHR11363:SF660S RIBOSOMAL PROTEIN L3-2coord: 1..388
score: