CSPI06G02010 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCAATTCATTTCACGGTGAACATCTTTCCCTCTCTCAAATCTTCTACTCGAAGTTTCAACTTCAACACTATTTTCCCGCCACCGTCACTGCATCCTTCCTCTCTTCAAAATTCTTCACCATGGAGATTATGGAATACCTTCTTCTCCCTCTTTGAAATGGGAAGGACCGGAGCAGATGGAATCCCATAAACGAAATCTCAGAGCTCGAAAACCCCTCGCCGATTGTACCAATACAATCCTCTCCTCCCAATCGCCAGCTTCCAATTTCTCCGCATCTATCAAACCCCGCAAGCGTGTAAGCAAATCTGCGGTTAAAGATGTTGCCAACAACGAGAAGAAACGCGAACCAATTCTTGCTTCTGAATCTACATCCGTTAATTTGCGAGCTTCAAACCCTAGCTCCGATTTTCTTCCTACTGAACCTACTTCCGATGTTCCCACTGCAGAACCAAATCCTAGTTTTGATTCTCTTCCTTCAGAACCTAGTTCTAATCGTTTCCCTACGGAACTCGCCACTCCTCCGCGGCCTTCAGATTTGCCCTCTAGTTCGGGTAATTTTACTTTCTGGTATTCGTTGCTGCGTTATGATTTTGGTGTTTGTCCTTGTTTCTCTTTGTGGGATTACTGCTACTCTAAGCTTTAGTTACTTCAAATAGGAATTTAGTTTACTTGAAATACTACGTTGGAATTTTTAGGATTTCAAGCTATTTTGGGATTCGTTAAACATTTTAAGTAGAGGAGATTTGCTGTTTTACTGTCATGTTCTTGTGTGCGGTGTTGAAATTTCTGTGTGGGGGAAGATTATGCTTCTGAATGTCAATATTGGGATGTTGTTATCTTCAATTTTTCCATGGCTTGAAGTATTGATATTATATTATGCTTTAATGTCAGGAACAGATGGTGTTTCGGAGCCCCATACAGTCTACAGTCGAAGGCACCCTTCGAATAAAAGAAAGAGCGTTGAGAAAGCACTTGAACCATTTATTTTTTATACCGCATCAAAAATCCAAAATGGGTATGAAGCTCGTTGCACTCTTCTTTTTGAGAGAAAATTTCTTGTATATTTAAACCTTTGATTCGTTTAGTGGATTGAATTCCTTAAATCGAAGGGATTTAATCATAGGTTCATAATGTTACTGGGCTATTAAGAGTCCAATAGTTGTTTAGTTTCAAAGGAGCAAGTTGCCTGCTCTCTGCAATAATTTTCAACCTGGCTCTCCCCTGCTCAGCTTTTGTAAAAAAAAAAAAAAATTAAGCTGTTATGTATCCTGGGTTTATGTGTTGCCTTGGACTATTTTAACGATTACTAGTCTGGGTTGATCTTGTGCTGCTTTGACACTAGCTTTATCTACATTGTTGAAGAATTGCTGCCACCCAAAACAGGATTTGTCAACATTTTTCCTGTTTTATTTTTGTTGGTTAATTTGTTGCGCCTCAATTGTGTGACTGCTTTGGATATGAAAAGGTTTGGTATGTCGAGCCTTTCATATTTGTAACTTGTAGATGATAGCACTAATACTGCAATGTTTTTTTCTCTCAAGATATGGATGAATGGATACAAGAATCTTTCTTCTAATTCCTCTTTAACGGCTTTTTACTCATTTTATGTTAATTGTTCCCTTGCTTTTATGCAGAGGTAGAATAAGAGATGACAACAATAGCCCATCGAAAGCAAGGACTGTTCCTTGCAATAAGGTTTGTCTGAAAATATAGACGGCCCTTTTTCTATCTGTTGATCTAAATTTGGGGCGGCATACGTGTGTTGTATCCTTATCTTTGCTCCTTGAGTCTTTAGGCCGTAATTTGATGCTTGTTTTTGAAGTCAGCAAAATATGTGCTCTGGCCTTTCTCTCAGAAATGTGATGTTATCTGTTCTTATCTATACCACAATAATGAGCTTTGATCTTGATTAGTGATTAATTAGTAACATTGTACAACGTAATTTTTGGTCATGGTTTGCTTATATTTTTTACGGGATTGTTAAATTGATTTGAGACTGATTTTTTATTCTTTATAAAGAATGGTAAATACCTGGAATGAAACGGCAGAAATAGCACCCCCACCCCCCATTCAGTAGTCTTAACAGTCAAGATCACTGCATCTCAGTTTTAGAAGCTTTACTTTTTATAATGTGATGACCTGACAAGTGTGGTAATCGACCAATTGGTGTATTTAATAGTTTCACATGTTTCCCACTTGCCATTACCATTTGTTAGCAGTCAGATACTGGCCCTAAATCATTGCTCAGCAAATTAATCTAACGATGAGTAGCTATTGTTCTGGCAGAGGCTGCGTGCCAATGTACATGAGGAAGATGATTCCAAAATAGAGCTTCCAAGGGAATTTGTTGAACAGCAGAAAACATATTTTTCAGAAGTAGATGCATTTGAACTGCCCGTAGAGGAGGCTAAGTCATCTGACTCGGAGTAGATGGTTGTTCTGTATAGTATGTGTGAAGCATAGGCAATGTAACCCTTCAAGTTAATAGTTTGTATGGTGAAGCTAAGCTGGTAAAGTTGATGTTCATTACTCATATAAACGGCTTGCTTACTTCTATCAGTCAATGCAGGTGTTGTTTTCTCCCTAAACTCTTCAGAGAATCTTTTACCTTTTAGTGTCTTTTTAATCTTTTTTCTTTTGCTGTTAGGCTGAGAAAATTAGAATACCTAATCACATAGTTTTGAACCTCAACAGTAACATTTGCAAAAAGAAGTATTCAAATCGTGGCTGTATTTGGATAGATTAATAGGGCTTTGAACCGGATTAGAAATCTTAAATAAC ATGGAATCCCATAAACGAAATCTCAGAGCTCGAAAACCCCTCGCCGATTGTACCAATACAATCCTCTCCTCCCAATCGCCAGCTTCCAATTTCTCCGCATCTATCAAACCCCGCAAGCGTGTAAGCAAATCTGCGGTTAAAGATGTTGCCAACAACGAGAAGAAACGCGAACCAATTCTTGCTTCTGAATCTACATCCGTTAATTTGCGAGCTTCAAACCCTAGCTCCGATTTTCTTCCTACTGAACCTACTTCCGATGTTCCCACTGCAGAACCAAATCCTAGTTTTGATTCTCTTCCTTCAGAACCTAGTTCTAATCGTTTCCCTACGGAACTCGCCACTCCTCCGCGGCCTTCAGATTTGCCCTCTAGTTCGGGAACAGATGGTGTTTCGGAGCCCCATACAGTCTACAGTCGAAGGCACCCTTCGAATAAAAGAAAGAGCGTTGAGAAAGCACTTGAACCATTTATTTTTTATACCGCATCAAAAATCCAAAATGGAGGTAGAATAAGAGATGACAACAATAGCCCATCGAAAGCAAGGACTGTTCCTTGCAATAAGAGGCTGCGTGCCAATGTACATGAGGAAGATGATTCCAAAATAGAGCTTCCAAGGGAATTTGTTGAACAGCAGAAAACATATTTTTCAGAAGTAGATGCATTTGAACTGCCCGTAGAGGAGGCTAAGTCATCTGACTCGGAGTAG ATGGAATCCCATAAACGAAATCTCAGAGCTCGAAAACCCCTCGCCGATTGTACCAATACAATCCTCTCCTCCCAATCGCCAGCTTCCAATTTCTCCGCATCTATCAAACCCCGCAAGCGTGTAAGCAAATCTGCGGTTAAAGATGTTGCCAACAACGAGAAGAAACGCGAACCAATTCTTGCTTCTGAATCTACATCCGTTAATTTGCGAGCTTCAAACCCTAGCTCCGATTTTCTTCCTACTGAACCTACTTCCGATGTTCCCACTGCAGAACCAAATCCTAGTTTTGATTCTCTTCCTTCAGAACCTAGTTCTAATCGTTTCCCTACGGAACTCGCCACTCCTCCGCGGCCTTCAGATTTGCCCTCTAGTTCGGGAACAGATGGTGTTTCGGAGCCCCATACAGTCTACAGTCGAAGGCACCCTTCGAATAAAAGAAAGAGCGTTGAGAAAGCACTTGAACCATTTATTTTTTATACCGCATCAAAAATCCAAAATGGAGGTAGAATAAGAGATGACAACAATAGCCCATCGAAAGCAAGGACTGTTCCTTGCAATAAGAGGCTGCGTGCCAATGTACATGAGGAAGATGATTCCAAAATAGAGCTTCCAAGGGAATTTGTTGAACAGCAGAAAACATATTTTTCAGAAGTAGATGCATTTGAACTGCCCGTAGAGGAGGCTAAGTCATCTGACTCGGAGTAG
BLAST of CSPI06G02010 vs. TrEMBL
Match: A0A0A0KDF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G013930 PE=4 SV=1) HSP 1 Score: 445.3 bits (1144), Expect = 4.7e-122 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 1
BLAST of CSPI06G02010 vs. TrEMBL
Match: M5X875_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024253mg PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.0e-12 Identity = 80/234 (34.19%), Postives = 119/234 (50.85%), Query Frame = 1
BLAST of CSPI06G02010 vs. TrEMBL
Match: B9S4B1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0688790 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.5e-11 Identity = 68/198 (34.34%), Postives = 104/198 (52.53%), Query Frame = 1
BLAST of CSPI06G02010 vs. TrEMBL
Match: A0A0D2UVV1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G295300 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.6e-11 Identity = 73/232 (31.47%), Postives = 118/232 (50.86%), Query Frame = 1
BLAST of CSPI06G02010 vs. TrEMBL
Match: A0A0B0MUI9_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_29774 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.7e-10 Identity = 77/234 (32.91%), Postives = 117/234 (50.00%), Query Frame = 1
BLAST of CSPI06G02010 vs. TAIR10
Match: AT3G56250.1 (AT3G56250.1 unknown protein) HSP 1 Score: 68.6 bits (166), Expect = 6.0e-12 Identity = 74/238 (31.09%), Postives = 112/238 (47.06%), Query Frame = 1
BLAST of CSPI06G02010 vs. NCBI nr
Match: gi|449441570|ref|XP_004138555.1| (PREDICTED: uncharacterized protein LOC101214708 isoform X3 [Cucumis sativus]) HSP 1 Score: 445.3 bits (1144), Expect = 6.7e-122 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 1
BLAST of CSPI06G02010 vs. NCBI nr
Match: gi|778709634|ref|XP_011656428.1| (PREDICTED: uncharacterized protein LOC101214708 isoform X1 [Cucumis sativus]) HSP 1 Score: 439.1 bits (1128), Expect = 4.8e-120 Identity = 234/239 (97.91%), Postives = 234/239 (97.91%), Query Frame = 1
BLAST of CSPI06G02010 vs. NCBI nr
Match: gi|778709638|ref|XP_011656429.1| (PREDICTED: uncharacterized protein LOC101214708 isoform X2 [Cucumis sativus]) HSP 1 Score: 430.3 bits (1105), Expect = 2.2e-117 Identity = 232/239 (97.07%), Postives = 232/239 (97.07%), Query Frame = 1
BLAST of CSPI06G02010 vs. NCBI nr
Match: gi|659113797|ref|XP_008456760.1| (PREDICTED: putative protein TPRXL isoform X3 [Cucumis melo]) HSP 1 Score: 414.1 bits (1063), Expect = 1.7e-112 Identity = 216/234 (92.31%), Postives = 225/234 (96.15%), Query Frame = 1
BLAST of CSPI06G02010 vs. NCBI nr
Match: gi|659113793|ref|XP_008456758.1| (PREDICTED: putative protein TPRXL isoform X1 [Cucumis melo]) HSP 1 Score: 407.9 bits (1047), Expect = 1.2e-110 Identity = 216/239 (90.38%), Postives = 225/239 (94.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |