CSPI06G01010 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAATAGTTAAAAGGTAAAAACGTGGAGCGTTGGGTTTTACGAAAAACCCTAAATAGAAAACATCGAATCGAAGAAATAAGTTTGGTGGTTCCATCAGTTGGAGCATGAACCTCTACTTCAATGGCTATCTTTCTCAAACGTTCCTTCTCCTACAGAAATTTCATCCTTCTCCGTAATTTTGCAAATCAAACCTGTAACTTTTCCTTCTCTGTCAACCATTTCTCCCACTCATGGACCTCCGACACCTCTCCCCGATTTCCTCTTCCTCCTCCAGATTTCATCCGAGAGACTCGTCGGGGTTTTGCTAAAGGCCGAAAATCAAGTAACGATCATGTTGAATATATTATTTATTCTGTCCATGTTTCTCCTGCTCCGGTTTTGAATCGCTTTAATTTTTTTTTTTTTTTTTTTTTTTGTGTTGGGAACTTGGGAAGATGAATCTTCTACAAGTATGCCTGAGGCGTTGCCTGATATTCGACCCACGATTAAAGCAAACGCTAGCTCGCAAATGGAGGCTTCGATAGTTGCATTATCAGGAGAATTAAGCAAGCTTCGAACGGGCAGGGCATCACCTGGTACATTCACTGTCGTATTTATCTAACATTTACACTTCAAGGTTTTATTGTCTTAGCCTGCCCTTGTGATTGCTTACACTATCTCTTACACTGTACTTACAGGAATGCTTGACCACATTATAGTAGAAACTTCAGGTGTGAAGCTGCCGTTGAATCAGATTGCGGCTGTATCGGTCTTGGATTCTAAAACATTGTCAATAAATCCTTATGATCCCAGTGTAATCACCTTACGAAACCCTCTTCTTAAGTTATTTTATCATTTTTCTTCATCATGAGATGTGGTTAATTTCTCATGTTCGTGATTATTTGTGGTAAGGAGAACATGGGCCTGCTTTGATTGGTTTTTTGACTGCTTAAAAACATATATTTAAGTAATTAGAAATTCAATCCAAACATTCCATAGATTGTGCAATTCACTTAGCAGAGCAAATGTTGCATGTAATCTTTAAATTTTCATCTTTGGCAACTTTTGAAATGTATCAAATTGAGTTATGCTTTATTATTGTCATTATCGAAACAAGGTTTTTGTTTCTACTCTACCTGATGTGAGAATTCATAGACACTATCGACATATCTGTTAGTGTTCTTAGCTGAAAAGTGGTATTTGGAATGTCATTCTTATGATAATTACTCTTCTATGCAGACACTAAAGAATTTAGAAACTGCTATAATATCATCTCCTTTAGGTGTAGCACCAAGAGTAGACGGAGAGAGGTTAATTGCAGTCATTCCACCGTAAGTTTTCATGTTCTCTTCCACTGTCTATATGGTTGTTCTTTAAATGTTAAAGCATATTGTATCTGTGAGCTTGACCTTCACACTTTGACAAATATTTTATCCTGATGTTTCTCTTTTTATGCTTGCTATACCAGATTGACCAAAGAACATATCCAGGTATTCTCCAAATCATTTTGCATCTTTCCTTGTTATCCTTTTCTTGGTTCTATAATGCCTATATGGTGGACATTTCTATAGGCTATGTGTAAGCTGGTCACCAAGTGTTGCGAAGATTCCAGACAAAGCATACGACGAGCTCGCCAAAAGGTTGTTTTAGCTACATCTTCACTTCATATAATTAATTTTCAGAAATGTTTGCTAGTAATCATCTAGAGCATAAAAGATATTGGTTCCTGAGGTACCTTGTTTGGTAAGCTCAATAGTTGTAGAAGTCCCAAGAGGCATTATTTTTATGACACTTGCCTCATTCATTACTTTGTATCCAAAACAATCAAGTTTCATGTTAGCTTACAAAATAACCCCAGCTTCACTTCACCTGAATGATCGTGAAGTCATTATGTTAATACCACAAACTCATAGGTGTTAGCAAGTGTTCACAAGTGTTAGCAAGTCTTTCAGATAGTCCTAAGAGCCCTAGGTGTTAGCAAGGGTGTCGTAAAAGGACTTCATTTATTCACATCATTTACAGAACTGAGTTGATTTGTGGTTGATTCGCAGGCCATGGATACAGTTAAAAAGATTAGCTCAAGCTACCCAAAGGATGACATAAAAAGGCTGGAAAAGGAAGTGAGTTGAAGAAGTTGAATCTAATCAAATCATATTTCAATTTTGCTTTTTATTAATTAAATACTGTTACATTTTTGTTTCAGGTTGATGAATTGACTAAGAAGTTTATCAAGTCAGCCGAAGAACTGTGCAAGGGAAAGGAGAAGGAGATCACTGGAGGTTAAAGAAATTTATAGTTCACAATTTTGACAGATGAATCATTCTAATAATTTGTTTTTAAAATTAAGCCGTCCCGTTATAGAGCTTTTTATAATCACAGAGAGGGATGTAACAGTGGATGTTGAAATGGTAATTTCTCGTCAGCAAGCTCTGGTTCAATAGTTACCATTTCAATTTGTTTCAATTTTGATTCTTGTAGTGTAGGAAGCAATGAACTTGAAACCTCTACGAAATGAAATTCTCGGGTGATGTTTTGTAGATTTAACAATTGGAAGATTTTACTGAAACAAGCCGTATATGTGCTTTTTAGTACCTCCCGTTGTTACTTTGAA ATGGCTATCTTTCTCAAACGTTCCTTCTCCTACAGAAATTTCATCCTTCTCCGTAATTTTGCAAATCAAACCTGTAACTTTTCCTTCTCTGTCAACCATTTCTCCCACTCATGGACCTCCGACACCTCTCCCCGATTTCCTCTTCCTCCTCCAGATTTCATCCGAGAGACTCGTCGGGGTTTTGCTAAAGGCCGAAAATCAAATGAATCTTCTACAAGTATGCCTGAGGCGTTGCCTGATATTCGACCCACGATTAAAGCAAACGCTAGCTCGCAAATGGAGGCTTCGATAGTTGCATTATCAGGAGAATTAAGCAAGCTTCGAACGGGCAGGGCATCACCTGGAATGCTTGACCACATTATAGTAGAAACTTCAGGTGTGAAGCTGCCGTTGAATCAGATTGCGGCTGTATCGGTCTTGGATTCTAAAACATTGTCAATAAATCCTTATGATCCCAGTACACTAAAGAATTTAGAAACTGCTATAATATCATCTCCTTTAGGTGTAGCACCAAGAGTAGACGGAGAGAGGTTAATTGCAGTCATTCCACCATTGACCAAAGAACATATCCAGGCTATGTGTAAGCTGGTCACCAAGTGTTGCGAAGATTCCAGACAAAGCATACGACGAGCTCGCCAAAAGGTTGTTTTAGCTACATCTTCACTTCATATAATTAATTTTCAGAAATGTTTGCTAGTAATCATCTAG ATGGCTATCTTTCTCAAACGTTCCTTCTCCTACAGAAATTTCATCCTTCTCCGTAATTTTGCAAATCAAACCTGTAACTTTTCCTTCTCTGTCAACCATTTCTCCCACTCATGGACCTCCGACACCTCTCCCCGATTTCCTCTTCCTCCTCCAGATTTCATCCGAGAGACTCGTCGGGGTTTTGCTAAAGGCCGAAAATCAAATGAATCTTCTACAAGTATGCCTGAGGCGTTGCCTGATATTCGACCCACGATTAAAGCAAACGCTAGCTCGCAAATGGAGGCTTCGATAGTTGCATTATCAGGAGAATTAAGCAAGCTTCGAACGGGCAGGGCATCACCTGGAATGCTTGACCACATTATAGTAGAAACTTCAGGTGTGAAGCTGCCGTTGAATCAGATTGCGGCTGTATCGGTCTTGGATTCTAAAACATTGTCAATAAATCCTTATGATCCCAGTACACTAAAGAATTTAGAAACTGCTATAATATCATCTCCTTTAGGTGTAGCACCAAGAGTAGACGGAGAGAGGTTAATTGCAGTCATTCCACCATTGACCAAAGAACATATCCAGGCTATGTGTAAGCTGGTCACCAAGTGTTGCGAAGATTCCAGACAAAGCATACGACGAGCTCGCCAAAAGGTTGTTTTAGCTACATCTTCACTTCATATAATTAATTTTCAGAAATGTTTGCTAGTAATCATCTAG
BLAST of CSPI06G01010 vs. Swiss-Prot
Match: RRF_BACSK (Ribosome-recycling factor OS=Bacillus clausii (strain KSM-K16) GN=frr PE=3 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.7e-28 Identity = 69/178 (38.76%), Postives = 116/178 (65.17%), Query Frame = 1
BLAST of CSPI06G01010 vs. Swiss-Prot
Match: RRF_ALKOO (Ribosome-recycling factor OS=Alkaliphilus oremlandii (strain OhILAs) GN=frr PE=3 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 3.7e-28 Identity = 71/178 (39.89%), Postives = 110/178 (61.80%), Query Frame = 1
BLAST of CSPI06G01010 vs. Swiss-Prot
Match: RRF_BACHD (Ribosome-recycling factor OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=frr PE=3 SV=3) HSP 1 Score: 125.9 bits (315), Expect = 6.3e-28 Identity = 71/175 (40.57%), Postives = 111/175 (63.43%), Query Frame = 1
BLAST of CSPI06G01010 vs. Swiss-Prot
Match: RRF_GEOTN (Ribosome-recycling factor OS=Geobacillus thermodenitrificans (strain NG80-2) GN=frr PE=3 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.1e-27 Identity = 68/174 (39.08%), Postives = 110/174 (63.22%), Query Frame = 1
BLAST of CSPI06G01010 vs. Swiss-Prot
Match: RRF_DESVM (Ribosome-recycling factor OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=frr PE=3 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 5.4e-27 Identity = 69/179 (38.55%), Postives = 115/179 (64.25%), Query Frame = 1
BLAST of CSPI06G01010 vs. TrEMBL
Match: A0A0A0KA50_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G008020 PE=4 SV=1) HSP 1 Score: 501.9 bits (1291), Expect = 4.7e-139 Identity = 262/263 (99.62%), Postives = 262/263 (99.62%), Query Frame = 1
BLAST of CSPI06G01010 vs. TrEMBL
Match: A0A0G4AMA2_9ROSI (Ribosome recycling factor OS=Francoa sonchifolia PE=2 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 1.4e-82 Identity = 170/265 (64.15%), Postives = 216/265 (81.51%), Query Frame = 1
BLAST of CSPI06G01010 vs. TrEMBL
Match: I1M0P2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G194000 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 2.4e-82 Identity = 176/266 (66.17%), Postives = 210/266 (78.95%), Query Frame = 1
BLAST of CSPI06G01010 vs. TrEMBL
Match: A0A0B2S0L9_GLYSO (Ribosome-recycling factor OS=Glycine soja GN=glysoja_007400 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 2.4e-82 Identity = 176/266 (66.17%), Postives = 210/266 (78.95%), Query Frame = 1
BLAST of CSPI06G01010 vs. TrEMBL
Match: M5XD83_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010230mg PE=4 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 3.1e-82 Identity = 171/264 (64.77%), Postives = 208/264 (78.79%), Query Frame = 1
BLAST of CSPI06G01010 vs. TAIR10
Match: AT3G01800.1 (AT3G01800.1 Ribosome recycling factor) HSP 1 Score: 306.2 bits (783), Expect = 1.9e-83 Identity = 166/265 (62.64%), Postives = 211/265 (79.62%), Query Frame = 1
BLAST of CSPI06G01010 vs. TAIR10
Match: AT3G63190.1 (AT3G63190.1 ribosome recycling factor, chloroplast precursor) HSP 1 Score: 109.4 bits (272), Expect = 3.5e-24 Identity = 64/181 (35.36%), Postives = 105/181 (58.01%), Query Frame = 1
BLAST of CSPI06G01010 vs. NCBI nr
Match: gi|778709279|ref|XP_004138478.2| (PREDICTED: ribosome-recycling factor, chloroplastic [Cucumis sativus]) HSP 1 Score: 501.9 bits (1291), Expect = 6.8e-139 Identity = 262/263 (99.62%), Postives = 262/263 (99.62%), Query Frame = 1
BLAST of CSPI06G01010 vs. NCBI nr
Match: gi|659081500|ref|XP_008441363.1| (PREDICTED: ribosome-recycling factor, chloroplastic [Cucumis melo]) HSP 1 Score: 468.8 bits (1205), Expect = 6.4e-129 Identity = 246/263 (93.54%), Postives = 255/263 (96.96%), Query Frame = 1
BLAST of CSPI06G01010 vs. NCBI nr
Match: gi|694392399|ref|XP_009371676.1| (PREDICTED: ribosome-recycling factor, chloroplastic [Pyrus x bretschneideri]) HSP 1 Score: 323.6 bits (828), Expect = 3.3e-85 Identity = 175/266 (65.79%), Postives = 213/266 (80.08%), Query Frame = 1
BLAST of CSPI06G01010 vs. NCBI nr
Match: gi|658052756|ref|XP_008362112.1| (PREDICTED: ribosome-recycling factor, chloroplastic-like [Malus domestica]) HSP 1 Score: 322.4 bits (825), Expect = 7.4e-85 Identity = 174/266 (65.41%), Postives = 212/266 (79.70%), Query Frame = 1
BLAST of CSPI06G01010 vs. NCBI nr
Match: gi|836713587|gb|AKM76780.1| (ribosome recycling factor [Francoa sonchifolia]) HSP 1 Score: 314.3 bits (804), Expect = 2.0e-82 Identity = 170/265 (64.15%), Postives = 216/265 (81.51%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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