CSPI06G00500 (gene) Wild cucumber (PI 183967)

NameCSPI06G00500
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionRNA binding protein, putative
LocationChr6 : 371545 .. 373790 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTCTTTTGGATTAAATAGTAATTGAGATTTATTGAATAGTGAAATGCTTATTCAAACCTGATTTTTGATACCCTTCTTCTTGCCTTTCTTCCTCCATCCCTTTGCACACTCGGCTGGCCTGACCCCTATCCCTCTCCGGCTACTACGTACTTCCCTTGTCGAACCAAATCCTGGACCCGCCGGGAAGGAGGTCGACACCCGCGAACACCCCTCAGCTACCCTCTCACTCCCGCCGCGACATACCACCGGTAAATTTTTTCAAATCCTTAGGGACTATTGCATCGATTCGGTTTATAATTCCGCTCAACTAGTTCTGAAAGACCGTATTTCTGTTTATAGGTTTCGGATTAGTAAGAATTCTAGTGCCCTAAAGATTCGTATATGGCCCCTTGCGTGAGTGCTCGTATGTTGTTTGTTTGAGTGCTTTATAATTTACTTTCCTAATAAATGTGGAGTTGATAAAATAATATACTATAATTGTTACTTAGGGTTGACATGCTTGTATTGAAGTGTATATTGCCTTCTGCAGAAATCCTTACAATTTCATTGTGGATCGTCGTTCTTTGCGACAGGTTTGAAGTGGGAGTAGCAAGCGCATTGAGCAGTAACATGGAGAGGCCGCAGAAATCTAGACCTCCCGAACTTATTAAGTTGAATGATGCAGCGAAATTGGTAATCACTTAAAAGTTTCTTTGGTCACTTTGTCATGGTTTTGTTCACATTCCTGTTCTTCTTTGCTGTCGGGTTTTGCGGCTAGGATTTTTATGCACCTTGATTTACATTTGCCCCATTATTATGCACCTTCATCATGGTATGCTTTTGGGTTTGATGGTGATTTAATTGTTTTGTGTTCCGCTTTTTCTCGATAAAATGTTAAATCTTTTACCCTGGATTAGATAGCCTTTTATGGAGTAAAGTAAACTTAGCACTCTAAACTCTTTGGATTGCAACATGAACTAAAGGTTGGTGATTAAAAGGTGTTCGCATTTGAGGTCCGTTTTGAAGTGAAATACTGAGCCTTTCCAATGAAGAGTTAGAACTTGGATATTTTCTAGGAAAGGAGAAAATTATATGGAAATGCAAATTACAAGAATTGGATGAGAAATTCAATTGAAAGGAAAAGGATTTCCTTGAACTTGTCACTGAATGCTTTGCGACAGTCATTCTTAAAGGATGTATTTAGAGGTGTGTGTCTACTTATAGGTCTTGCTTTCCCTGGTTATGGTCAATATTGTGAAGGTAGAAACTGTTGGAGATGACATCGAGGTGTGAAGGGTTGGGATGCACTCCTCGTTCCTAACTTTGGAATGATTTTTCATCTTCTTCCCTATGTTTGTGGATTAGAATTGGTGGGATTTTGCATCACGATGTGGTGCATAAAGACTTGTCCTGATATTTGACAAACTGAATATCCATCTTACGTGCAGGCAGCGCAGTTGATGAGCAAGATGACTAATTCCGAGTGGAAAGAAACTGGAGTTGATAGTGAATCAACTGCGATTGAACCCGAGATGCGACCTCCTAGGTCAGTATACAACGAACCTGTTTATTGTATGCCTCACACTAAGCTGTTTACTAACTCTAGACCTGTTCCTCTAGACTTGGACTTGGAGCCAAAGTAACACGCCATTTCAGAAATGGACCGTCTAATGACCCACTTGATAGAAAACTATATGCAAAGTTAGATGCTGGGAAAAAACAAGCAGCTAGAAAGATGTCGGAGGATACTCCCATACTTAACACTAAAGATGACAACGATGACGACGATGAAGAAGAAGAGAGTAGAACTGCCATCTTCAGTAAGAAGCGAGCACCAAAGCCAGTAACTATGCCTCCTTTGCAGGGGAAGAAAAAGAGAAGGTAACTTTTGCAGATAGGGAATATCGATTATGGAACAGGTTGTCTCCAAAGGTATTTAATTAGTTCCTAAGAAAGTACCAAATTAATCGAAAATACTGGGTAAGCGATGATATCTCATCAATATCCTTTTGTAGCATACAACCTTCAAATCTTTCTTGAGGCTGACTTTTCATAGTTATAGAGGTCGAATTGTTTTGATATCAAATTATAATGTTCCAACTTGCAAGTTCTATAAAATTGCTACCCTACAATTTTGGTTTAAAAGGTACTTTACCCATATGGTTGTTAACTTAGTTTCATTTTTTTCCCTGACCAGACTCATATTTCTGTTGGTACGATTAAACTTTATTGGTATGGCCATGCCAATATGGCATAATTTAACCT

mRNA sequence

ATGGAGAGGCCGCAGAAATCTAGACCTCCCGAACTTATTAAGTTGAATGATGCAGCGAAATTGGCAGCGCAGTTGATGAGCAAGATGACTAATTCCGAGTGGAAAGAAACTGGAGTTGATAGTGAATCAACTGCGATTGAACCCGAGATGCGACCTCCTAGACTTGGACTTGGAGCCAAAGTAACACGCCATTTCAGAAATGGACCGTCTAATGACCCACTTGATAGAAAACTATATGCAAAGTTAGATGCTGGGAAAAAACAAGCAGCTAGAAAGATGTCGGAGGATACTCCCATACTTAACACTAAAGATGACAACGATGACGACGATGAAGAAGAAGAGAGTAGAACTGCCATCTTCAGTAAGAAGCGAGCACCAAAGCCAGTAACTATGCCTCCTTTGCAGGGGAAGAAAAAGAGAAGGTAA

Coding sequence (CDS)

ATGGAGAGGCCGCAGAAATCTAGACCTCCCGAACTTATTAAGTTGAATGATGCAGCGAAATTGGCAGCGCAGTTGATGAGCAAGATGACTAATTCCGAGTGGAAAGAAACTGGAGTTGATAGTGAATCAACTGCGATTGAACCCGAGATGCGACCTCCTAGACTTGGACTTGGAGCCAAAGTAACACGCCATTTCAGAAATGGACCGTCTAATGACCCACTTGATAGAAAACTATATGCAAAGTTAGATGCTGGGAAAAAACAAGCAGCTAGAAAGATGTCGGAGGATACTCCCATACTTAACACTAAAGATGACAACGATGACGACGATGAAGAAGAAGAGAGTAGAACTGCCATCTTCAGTAAGAAGCGAGCACCAAAGCCAGTAACTATGCCTCCTTTGCAGGGGAAGAAAAAGAGAAGGTAA
BLAST of CSPI06G00500 vs. TrEMBL
Match: A0A0A0K9Y5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G004500 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 7.3e-70
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 1

Query: 1   MERPQKSRPPELIKLNDAAKLAAQLMSKMTNSEWKETGVDSESTAIEPEMRPPRLGLGAK 60
           MERPQKSRPPELIKLNDAAKLAAQLMSKMTNSEWKETGVDSESTAIEPEMRPPRLGLGAK
Sbjct: 1   MERPQKSRPPELIKLNDAAKLAAQLMSKMTNSEWKETGVDSESTAIEPEMRPPRLGLGAK 60

Query: 61  VTRHFRNGPSNDPLDRKLYAKLDAGKKQAARKMSEDTPILNTKDDN-DDDDEEEESRTAI 120
           VTRHFRNGPSNDPLDRKLYAKLDAGKKQAARKMSEDTPILNTKDDN DDDDEEEESRTAI
Sbjct: 61  VTRHFRNGPSNDPLDRKLYAKLDAGKKQAARKMSEDTPILNTKDDNDDDDDEEEESRTAI 120

Query: 121 FSKKRAPKPVTMPPLQGKKKRR 142
           FSKKRAPKPVTMPPLQGKKKRR
Sbjct: 121 FSKKRAPKPVTMPPLQGKKKRR 142

BLAST of CSPI06G00500 vs. TrEMBL
Match: A0A067L421_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04996 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.6e-24
Identity = 71/144 (49.31%), Postives = 97/144 (67.36%), Query Frame = 1

Query: 2   ERPQKSRPPELIKLNDAAKLAAQLMSKMTNSEWKETGVDSESTAIEPEMRPPRLGLGAKV 61
           E  +KS PP++++L+ A KLA Q ++ M+NS      V+ E   +EPE RP RLGLGAKV
Sbjct: 4   ETQKKSGPPQIVRLDKALKLAEQWVNNMSNS------VEDEKKEVEPEGRPNRLGLGAKV 63

Query: 62  TRHFRNGPSNDPLDRKLYAKLDAGKKQAARKMSEDTPI----LNTKDDNDDDDEEEESRT 121
            R FR GP NDP++RKL+AKL+AGK++AA+ + E  P      N+ D++DD D E ESR 
Sbjct: 64  AREFRVGPLNDPVERKLHAKLEAGKRKAAKSIEESLPTKNEGRNSNDNDDDSDGELESRN 123

Query: 122 AIFSKKRAPKPVTMPPLQGKKKRR 142
           + F+KKRA  P   P LQ KKK++
Sbjct: 124 SAFAKKRAGPPT--PSLQLKKKQK 139

BLAST of CSPI06G00500 vs. TrEMBL
Match: A0A067H2I0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032601mg PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-20
Identity = 67/142 (47.18%), Postives = 91/142 (64.08%), Query Frame = 1

Query: 2   ERPQKSRPPELIKLNDAAKLAAQLMSKMTNSEWKETGVDSESTAIEPEMRPPRLGLGAKV 61
           E  QK+ PP++ KL+ A KLA Q +  MT +       + E T IEPE RP RLGLGAKV
Sbjct: 4   EMQQKTGPPQIFKLDKALKLAEQWVDNMTKA------AEDEPTEIEPEARPSRLGLGAKV 63

Query: 62  TRHFRNGPSNDPLDRKLYAKLDAGKKQAARKMSEDTP-ILNTKDDNDDDD-EEEESRTAI 121
           +R  + GPSNDP++RKL   L+AGK+ AA+   E TP I +   DND+D+ E+ ESRT+ 
Sbjct: 64  SRQSKIGPSNDPVERKLQVSLNAGKRNAAKTAEESTPSIRDGHGDNDEDEAEDSESRTST 123

Query: 122 FSKKRAPKPVTMPPLQGKKKRR 142
           F+K+R   P +   LQ  KK++
Sbjct: 124 FAKRRPAPPTS--SLQALKKQK 137

BLAST of CSPI06G00500 vs. TrEMBL
Match: F6HCS1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0189g00090 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.4e-20
Identity = 66/137 (48.18%), Postives = 88/137 (64.23%), Query Frame = 1

Query: 4   PQKSRPPELIKLNDAAKLAAQLMSKMTNSEWKETGVDSESTAIEPEMRPPRLGLGAKVTR 63
           P K+ P +L+ LN A KLA Q +  M+      T ++ E T ++ E RP RLGLGAKV+R
Sbjct: 76  PPKTCPSQLVVLNKAFKLAEQWVKNMS------TPLEDEPTEVKLEARPSRLGLGAKVSR 135

Query: 64  HFRNGPSNDPLDRKLYAKLDAGKKQAARKMSEDT-PILNTKDDNDDDDEEEESRTAIFSK 123
             + GPSNDP++RKLYAKLDAGK+++++   E T    N  D++DD DE+ ESRT  FSK
Sbjct: 136 QSKIGPSNDPIERKLYAKLDAGKRKSSKSSKESTLSARNGSDNSDDSDEDLESRTKSFSK 195

Query: 124 KRAPKPVTMPPLQGKKK 140
           KR   P +   LQ  KK
Sbjct: 196 KRVVPPTS--SLQRNKK 204

BLAST of CSPI06G00500 vs. TrEMBL
Match: D7SJ36_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g03220 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 9.1e-20
Identity = 67/140 (47.86%), Postives = 88/140 (62.86%), Query Frame = 1

Query: 1   MERPQKSRPPELIKLNDAAKLAAQLMSKMTNSEWKETGVDSESTAIEPEMRPPRLGLGAK 60
           M  P K+ P +L+ LN A KLA Q +  M+      T +  E T ++ E RP RLGLGAK
Sbjct: 1   MSTPPKTCPSQLVVLNKAFKLAEQWVKNMS------TPLVDEPTDVKLEARPSRLGLGAK 60

Query: 61  VTRHFRNGPSNDPLDRKLYAKLDAGKKQAARKMSEDTPILNTKDDN-DDDDEEEESRTAI 120
           V+R  + GPSNDP++RKL+AKLDAGK+++A+ + E T    +  DN DD DE+ ESRT  
Sbjct: 61  VSRQSKIGPSNDPIERKLHAKLDAGKRKSAKSIKESTLSARSGSDNSDDSDEDLESRTKS 120

Query: 121 FSKKRAPKPVTMPPLQGKKK 140
           FSKKR   P +   LQ  KK
Sbjct: 121 FSKKRVVPPTS--SLQRNKK 132

BLAST of CSPI06G00500 vs. TAIR10
Match: AT3G61370.1 (AT3G61370.1 Protein of unknown function (DUF3245))

HSP 1 Score: 73.2 bits (178), Expect = 1.5e-13
Identity = 49/123 (39.84%), Postives = 72/123 (58.54%), Query Frame = 1

Query: 2   ERPQKSRPPELIKLNDAAKLAAQLMSKMTNSEWKETGVDSESTAIEPEMRPPRLGLGAKV 61
           E  +K   P++ K + A KLA + ++ MT    + T  D   TA   E RP RLGLGA+V
Sbjct: 4   ETAKKKGTPQIFKTDKAQKLAEKWVASMT----RPTEDDPIETA--QEERPHRLGLGAQV 63

Query: 62  TRHFRNGPSNDPLDRKLYAKLDAGKKQAARKMSEDTPILNTKDDNDDDDEEEESRTAIFS 121
           +R  +  PS+DPLD+KL AK  A K++ AR ++E         D+ +DD+E ES++  F 
Sbjct: 64  SRQTKRRPSDDPLDQKLEAKFAAVKRKNARLVAEAAGSSKNAGDDSEDDDESESKSQAFG 120

Query: 122 KKR 125
           KK+
Sbjct: 124 KKK 120

BLAST of CSPI06G00500 vs. TAIR10
Match: AT4G07940.1 (AT4G07940.1 Protein of unknown function (DUF3245))

HSP 1 Score: 58.2 bits (139), Expect = 4.9e-09
Identity = 34/72 (47.22%), Postives = 46/72 (63.89%), Query Frame = 1

Query: 54  RLGLGAKVTRHFRNGPSNDPLDRKLYAKLDAGKKQAARKMSEDT-PILNTKDDNDDDDEE 113
           +LGLGA+V+R  +  PS+DPLD+KL AK  AGK++ AR ++E      N  DDN+D DE 
Sbjct: 62  KLGLGAQVSRQKKRRPSDDPLDQKLEAKFAAGKRKNARLVAESAGSSKNAGDDNEDGDES 121

Query: 114 EESRTAIFSKKR 125
           E    A   KK+
Sbjct: 122 ESKSQAFGMKKK 133

BLAST of CSPI06G00500 vs. NCBI nr
Match: gi|449441462|ref|XP_004138501.1| (PREDICTED: uncharacterized protein LOC101222227 [Cucumis sativus])

HSP 1 Score: 271.2 bits (692), Expect = 1.1e-69
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 1

Query: 1   MERPQKSRPPELIKLNDAAKLAAQLMSKMTNSEWKETGVDSESTAIEPEMRPPRLGLGAK 60
           MERPQKSRPPELIKLNDAAKLAAQLMSKMTNSEWKETGVDSESTAIEPEMRPPRLGLGAK
Sbjct: 1   MERPQKSRPPELIKLNDAAKLAAQLMSKMTNSEWKETGVDSESTAIEPEMRPPRLGLGAK 60

Query: 61  VTRHFRNGPSNDPLDRKLYAKLDAGKKQAARKMSEDTPILNTKDDN-DDDDEEEESRTAI 120
           VTRHFRNGPSNDPLDRKLYAKLDAGKKQAARKMSEDTPILNTKDDN DDDDEEEESRTAI
Sbjct: 61  VTRHFRNGPSNDPLDRKLYAKLDAGKKQAARKMSEDTPILNTKDDNDDDDDEEEESRTAI 120

Query: 121 FSKKRAPKPVTMPPLQGKKKRR 142
           FSKKRAPKPVTMPPLQGKKKRR
Sbjct: 121 FSKKRAPKPVTMPPLQGKKKRR 142

BLAST of CSPI06G00500 vs. NCBI nr
Match: gi|659116729|ref|XP_008458228.1| (PREDICTED: uncharacterized protein LOC103497715 [Cucumis melo])

HSP 1 Score: 252.7 bits (644), Expect = 3.9e-64
Identity = 130/141 (92.20%), Postives = 136/141 (96.45%), Query Frame = 1

Query: 1   MERPQKSRPPELIKLNDAAKLAAQLMSKMTNSEWKETGVDSESTAIEPEMRPPRLGLGAK 60
           MERPQKSRPPE+IKLNDAAKLAAQLMSKMTNSEWKETGVD+ESTAIEPEMRPPRLGLGAK
Sbjct: 1   MERPQKSRPPEIIKLNDAAKLAAQLMSKMTNSEWKETGVDNESTAIEPEMRPPRLGLGAK 60

Query: 61  VTRHFRNGPSNDPLDRKLYAKLDAGKKQAARKMSEDTPILNTKDDNDDDDEEEESRTAIF 120
           VTRHFRNGPSNDPLDRKLYAKLDAGKKQAARKMSE+TP+L+ KDD D DDEEEESRTAIF
Sbjct: 61  VTRHFRNGPSNDPLDRKLYAKLDAGKKQAARKMSEETPVLDNKDD-DGDDEEEESRTAIF 120

Query: 121 SKKRAPKPVTMPPLQGKKKRR 142
           +KKRA KPVTMPP QGKKKRR
Sbjct: 121 NKKRAAKPVTMPPFQGKKKRR 140

BLAST of CSPI06G00500 vs. NCBI nr
Match: gi|802591946|ref|XP_012071311.1| (PREDICTED: uncharacterized protein LOC105633343 [Jatropha curcas])

HSP 1 Score: 119.4 bits (298), Expect = 5.1e-24
Identity = 71/144 (49.31%), Postives = 97/144 (67.36%), Query Frame = 1

Query: 2   ERPQKSRPPELIKLNDAAKLAAQLMSKMTNSEWKETGVDSESTAIEPEMRPPRLGLGAKV 61
           E  +KS PP++++L+ A KLA Q ++ M+NS      V+ E   +EPE RP RLGLGAKV
Sbjct: 4   ETQKKSGPPQIVRLDKALKLAEQWVNNMSNS------VEDEKKEVEPEGRPNRLGLGAKV 63

Query: 62  TRHFRNGPSNDPLDRKLYAKLDAGKKQAARKMSEDTPI----LNTKDDNDDDDEEEESRT 121
            R FR GP NDP++RKL+AKL+AGK++AA+ + E  P      N+ D++DD D E ESR 
Sbjct: 64  AREFRVGPLNDPVERKLHAKLEAGKRKAAKSIEESLPTKNEGRNSNDNDDDSDGELESRN 123

Query: 122 AIFSKKRAPKPVTMPPLQGKKKRR 142
           + F+KKRA  P   P LQ KKK++
Sbjct: 124 SAFAKKRAGPPT--PSLQLKKKQK 139

BLAST of CSPI06G00500 vs. NCBI nr
Match: gi|568876061|ref|XP_006491104.1| (PREDICTED: uncharacterized protein LOC102626074 [Citrus sinensis])

HSP 1 Score: 107.8 bits (268), Expect = 1.5e-20
Identity = 67/142 (47.18%), Postives = 91/142 (64.08%), Query Frame = 1

Query: 2   ERPQKSRPPELIKLNDAAKLAAQLMSKMTNSEWKETGVDSESTAIEPEMRPPRLGLGAKV 61
           E  QK+ PP++ KL+ A KLA Q +  MT +       + E T IEPE RP RLGLGAKV
Sbjct: 4   EMQQKTGPPQIFKLDKALKLAEQWVDNMTKA------AEDEPTEIEPEARPSRLGLGAKV 63

Query: 62  TRHFRNGPSNDPLDRKLYAKLDAGKKQAARKMSEDTP-ILNTKDDNDDDD-EEEESRTAI 121
           +R  + GPSNDP++RKL   L+AGK+ AA+   E TP I +   DND+D+ E+ ESRT+ 
Sbjct: 64  SRQSKIGPSNDPVERKLQVSLNAGKRNAAKTAEESTPSIRDGHGDNDEDEAEDSESRTST 123

Query: 122 FSKKRAPKPVTMPPLQGKKKRR 142
           F+K+R   P +   LQ  KK++
Sbjct: 124 FAKRRPAPPTS--SLQALKKQK 137

BLAST of CSPI06G00500 vs. NCBI nr
Match: gi|502105161|ref|XP_004492739.1| (PREDICTED: uncharacterized protein LOC101506165 [Cicer arietinum])

HSP 1 Score: 107.1 bits (266), Expect = 2.6e-20
Identity = 64/140 (45.71%), Postives = 91/140 (65.00%), Query Frame = 1

Query: 2   ERPQKSRPPELIKLNDAAKLAAQLMSKMTNSEWKETGVDSESTAIEPEMRPPRLGLGAKV 61
           E P+K+  P ++KLN A KLA   ++ M+ S       D E+T ++ E RP RLGLGAKV
Sbjct: 5   ENPKKTSAPPIVKLNKALKLAEAWVNNMSKS------ADDETTNVDMEGRPQRLGLGAKV 64

Query: 62  TRHFRNGPSNDPLDRKLYAKLDAGKKQAARKMSEDTPILNTKDDNDDDDEEEESRTAIFS 121
           +R  + GPSNDP++RKLYAKLDA K++AA    E +   +  D  DD+D+E+ESRT  F 
Sbjct: 65  SRQSKVGPSNDPVERKLYAKLDAEKRKAANIAKESSIASDNLD--DDEDDEDESRTNAFG 124

Query: 122 KKRAPKPVTMPPLQGKKKRR 142
           K++   P+T P + G KK++
Sbjct: 125 KRKVKAPLT-PNILGNKKQK 135

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K9Y5_CUCSA7.3e-7099.30Uncharacterized protein OS=Cucumis sativus GN=Csa_6G004500 PE=4 SV=1[more]
A0A067L421_JATCU3.6e-2449.31Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04996 PE=4 SV=1[more]
A0A067H2I0_CITSI1.1e-2047.18Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032601mg PE=4 SV=1[more]
F6HCS1_VITVI2.4e-2048.18Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0189g00090 PE=4 SV=... [more]
D7SJ36_VITVI9.1e-2047.86Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g03220 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT3G61370.11.5e-1339.84 Protein of unknown function (DUF3245)[more]
AT4G07940.14.9e-0947.22 Protein of unknown function (DUF3245)[more]
Match NameE-valueIdentityDescription
gi|449441462|ref|XP_004138501.1|1.1e-6999.30PREDICTED: uncharacterized protein LOC101222227 [Cucumis sativus][more]
gi|659116729|ref|XP_008458228.1|3.9e-6492.20PREDICTED: uncharacterized protein LOC103497715 [Cucumis melo][more]
gi|802591946|ref|XP_012071311.1|5.1e-2449.31PREDICTED: uncharacterized protein LOC105633343 [Jatropha curcas][more]
gi|568876061|ref|XP_006491104.1|1.5e-2047.18PREDICTED: uncharacterized protein LOC102626074 [Citrus sinensis][more]
gi|502105161|ref|XP_004492739.1|2.6e-2045.71PREDICTED: uncharacterized protein LOC101506165 [Cicer arietinum][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021641DUF3245
IPR021641DUF3245
IPR021641DUF3245
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G00500.2CSPI06G00500.2mRNA
CSPI06G00500.1CSPI06G00500.1mRNA
CSPI06G00500.3CSPI06G00500.3mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021641Protein of unknown function DUF3245PFAMPF11595DUF3245coord: 13..139
score: 2.1
NoneNo IPR availablePANTHERPTHR35741FAMILY NOT NAMEDcoord: 1..141
score: 3.9
NoneNo IPR availablePANTHERPTHR35741:SF1SUBFAMILY NOT NAMEDcoord: 1..141
score: 3.9

The following gene(s) are paralogous to this gene:

None