CSPI05G20510 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G20510
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr5 : 21581480 .. 21581754 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTGGCACTGCCATGATGTTAAATTGCCATCCAGGTTGGTTAAGGTGCTGGGAAGAGACAAACCAGACAAAGGTTTGTTATTACTTTCTAATAATTTTTTAAATAAAAAAATTAATTTTTAGTATATATTTTCTTTTACAATTCAACACAGAGTAGTGATTTGAACCTAGGGTCCATGAGGTATGGGAATGGGACTACATCCAGCAGCATTAAATTGACCTCTAAGATTGACAGTTGGTGCTGGATAGCCCAGATATGTTTGTGCCATTAG

mRNA sequence

ATGGAGTGGCACTGCCATGATGTTAAATTGCCATCCAGGTTGGTTAAGGTGCTGGGAAGAGACAAACCAGACAAAGGGTCCATGAGGTATGGGAATGGGACTACATCCAGCAGCATTAAATTGACCTCTAAGATTGACAGTTGGTGCTGGATAGCCCAGATATGTTTGTGCCATTAG

Coding sequence (CDS)

ATGGAGTGGCACTGCCATGATGTTAAATTGCCATCCAGGTTGGTTAAGGTGCTGGGAAGAGACAAACCAGACAAAGGGTCCATGAGGTATGGGAATGGGACTACATCCAGCAGCATTAAATTGACCTCTAAGATTGACAGTTGGTGCTGGATAGCCCAGATATGTTTGTGCCATTAG
Homology
[Close]
BLAST of CSPI05G20510 vs. TrEMBL
Match: A0A0A0KRT3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G581680 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 4.9e-28
Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 1 

Query: 1  MEWHCHDVKLPSRLVKVLGRDKPDKGSMRYGNGTTSSSIKLTSKIDSWCWIAQICLCH 59
          MEWHCHDVKLPSRLVKVLGRDKPDKGSMRYGNGTTSSSI+LTSKIDSWCWIAQICLCH
Sbjct: 1  MEWHCHDVKLPSRLVKVLGRDKPDKGSMRYGNGTTSSSIELTSKIDSWCWIAQICLCH 58

[Close]
BLAST of CSPI05G20510 vs. NCBI nr
Match: gi|700196407|gb|KGN51584.1| (hypothetical protein Csa_5G581680 [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 7.0e-28
Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 1 

Query: 1  MEWHCHDVKLPSRLVKVLGRDKPDKGSMRYGNGTTSSSIKLTSKIDSWCWIAQICLCH 59
          MEWHCHDVKLPSRLVKVLGRDKPDKGSMRYGNGTTSSSI+LTSKIDSWCWIAQICLCH
Sbjct: 1  MEWHCHDVKLPSRLVKVLGRDKPDKGSMRYGNGTTSSSIELTSKIDSWCWIAQICLCH 58

The following BLAST results are available for this feature:
BLAST of CSPI05G20510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI05G20510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRT3_CUCSA4.9e-2898.28Uncharacterized protein OS=Cucumis sativus GN=Csa_5G581680 PE=4 SV=1[more]
BLAST of CSPI05G20510 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI05G20510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700196407|gb|KGN51584.1|7.0e-2898.28hypothetical protein Csa_5G581680 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G20510.1CSPI05G20510.1mRNA