CSPI05G19400 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G19400
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionRetrotransposon protein
LocationChr5 : 20639267 .. 20640211 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAACCAAAACATTCGCACTATACTAGTTGTCTTCACATCCACCCATAATCAGTTAGTACTGCTATTGGATTCACTAATGAATGACAATAAGCGGGTGACCCATAAACCGTACGAATTGAGGCATCAAATTAGACAATTGTCATACTTCCGTATGATACACTCCTCCGACCTCGTTTATTGTGAAAGTACCAGAATGGACAGACGAACTTTTTCCATTCTATGTCACTTATTGAGGACGATTGCTGGTCTGACGTCGACCGAAATCGTCGATGGTCGCCATGTTTCTGCATATATTGGCACACGATGTCAAGAATAGAGTCATCCAGCGGGATTTTGTGCGATCAGGAGAGACTGTTTCCCGTCACTTTAACCTCGTACTGTTGGCGGTGTTGCGATTGCACAATGAGTTGTTGAAGAAACCCCAGCCAGTGACTAACACATGCACTGATTCACGATGGAGTTGCTTTGAGGTCCGCATATTACTATATTCTGTTACTTATCAATCACCACGTCAGTGACTAACTGGGTGGTATTTCATTCTGCAGAACTGCCTTGGGGCATTGGATGACACGTATATCAAGGTGAACATGTCGCAAACCGATAGGCATAGGTATAAAACACGTAAGGGAGAAGTTGCCACAAACGTCCTCGGTGTGTGTGATACGAAAGGCGACTTCGTCTTCGTATTGGCTGGTTGGGAAGGATCCGCAGCAGATTCGCGTATTCTTCGAGATGCTATTGCACGACCAAATGGACTGCATGTTCCTCACGGTAATCAAATGTTTTATGCCTCGAACATATACTTCCTACAACGTCAAGCAAATTAGTTCGATCTGACGCATTCGTAATAGGTTATTACTATCTATGCGACGTCGGATATCCCAATGCAGAGGGATTTCTAGCTCCCTATAGAGGACAAAGAGACCACTTGCAAGAGTAG

mRNA sequence

ATGGATAACCAAAACATTCGCACTATACTAGTTGTCTTCACATCCACCCATAATCAGTTAGTACTGCTATTGGATTCACTAATGAATGACAATAAGCGGGTGACCCATAAACCGTACGAATTGAGGCATCAAATTAGACAATTGTCATACTTCCGTATGATACACTCCTCCGACCTCGTTTATTGTGAAAGTACCAGAATGGACAGACGAACTTTTTCCATTCTATGTCACTTATTGAGGACGATTGCTGGTCTGACGTCGACCGAAATCGTCGATGGAGAGACTGTTTCCCGTCACTTTAACCTCGTACTGTTGGCGGTGTTGCGATTGCACAATGAGTTGTTGAAGAAACCCCAGCCAGTGACTAACACATGCACTGATTCACGATGGAGTTGCTTTGAGAACTGCCTTGGGGCATTGGATGACACGTATATCAAGGTGAACATGTCGCAAACCGATAGGCATAGGTATAAAACACGTAAGGGAGAAGTTGCCACAAACGTCCTCGGTGTGTGTTATTACTATCTATGCGACGTCGGATATCCCAATGCAGAGGGATTTCTAGCTCCCTATAGAGGACAAAGAGACCACTTGCAAGAGTAG

Coding sequence (CDS)

ATGGATAACCAAAACATTCGCACTATACTAGTTGTCTTCACATCCACCCATAATCAGTTAGTACTGCTATTGGATTCACTAATGAATGACAATAAGCGGGTGACCCATAAACCGTACGAATTGAGGCATCAAATTAGACAATTGTCATACTTCCGTATGATACACTCCTCCGACCTCGTTTATTGTGAAAGTACCAGAATGGACAGACGAACTTTTTCCATTCTATGTCACTTATTGAGGACGATTGCTGGTCTGACGTCGACCGAAATCGTCGATGGAGAGACTGTTTCCCGTCACTTTAACCTCGTACTGTTGGCGGTGTTGCGATTGCACAATGAGTTGTTGAAGAAACCCCAGCCAGTGACTAACACATGCACTGATTCACGATGGAGTTGCTTTGAGAACTGCCTTGGGGCATTGGATGACACGTATATCAAGGTGAACATGTCGCAAACCGATAGGCATAGGTATAAAACACGTAAGGGAGAAGTTGCCACAAACGTCCTCGGTGTGTGTTATTACTATCTATGCGACGTCGGATATCCCAATGCAGAGGGATTTCTAGCTCCCTATAGAGGACAAAGAGACCACTTGCAAGAGTAG
Homology
[Close]
BLAST of CSPI05G19400 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 5.3e-58
Identity = 131/266 (49.25%), Postives = 149/266 (56.02%), Query Frame = 1 

Query: 1   MDNQNIRTILVVFTSTHNQLVLLLDSLMNDNKRVTHKPYELRHQIRQLSYFRMIHSSDLV 60
           MD   + +I+  F ++  QL+L+L+ L ND KR+TH PYE RH+IRQL+YFRMIH     
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHG---- 60

Query: 61  YCESTRMDRRTFSILCHLLRTIAGLTSTEIVD---------------------------- 120
                               TIAGLTSTE+VD                            
Sbjct: 61  --------------------TIAGLTSTEVVDVEEMVAMFLHILAHDVKSRVIKREFMRS 120

Query: 121 GETVSRHFNLVLLAVLRLHNELLKKPQPVTNTCTDSRWSCFENCLGALDDTYIKVNMSQT 180
           GET+SRHFN+VLLAV+RLH ELLKKPQPV N CTD RW  FENCLGALD TYIKVN+  +
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 181 DRHRYKTRKGEVATNVLGVC--------------------------------------YY 201
           DR RY+TRKGEVATNVLGVC                                      YY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

[Close]
BLAST of CSPI05G19400 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 3.6e-54
Identity = 116/214 (54.21%), Postives = 130/214 (60.75%), Query Frame = 1 

Query: 53  MIHSSDLVYCESTRMDRRTFSILCHLLRTIAGLTSTEIVD-------------------- 112
           MIH SDLV  +STRMDRRTF+ILCHLLR +AGL+STEIVD                    
Sbjct: 1   MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 60

Query: 113 --------GETVSRHFNLVLLAVLRLHNELLKKPQPVTNTCTDSRWSCFENCLGALDDTY 172
                   GETVSRHFN+VLLAVLRL+ EL+K+P PVT+ C D RW CFENCLGALD TY
Sbjct: 61  IQQEFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTY 120

Query: 173 IKVNMSQTDRHRYKTRKGEVATNVLGVC-------------------------------- 201
           IKVN+   DR  ++TRKGE+ATNVLGVC                                
Sbjct: 121 IKVNVPAGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRILRDAISQENG 180

[Close]
BLAST of CSPI05G19400 vs. TrEMBL
Match: A0A068UN28_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019523001 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.3e-40
Identity = 90/162 (55.56%), Postives = 101/162 (62.35%), Query Frame = 1 

Query: 67  MDRRTFSILCHLLRTIAGLTST------EIV----------------------DGETVSR 126
           MDRRTF ILC ++R   GL +T      EIV                        ETVSR
Sbjct: 1   MDRRTFGILCEMIRDTGGLKATRNMSIEEIVAMFVYVLAHHKKSRTICGLFWRSRETVSR 60

Query: 127 HFNLVLLAVLRLHNELLKKPQPVTNTCTDSRWSCFENCLGALDDTYIKVNMSQTDRHRYK 186
            FNL LLAVL+LH  LLKKP+P+T  CTD RW CF+NCLGALD T I V      + RY+
Sbjct: 61  QFNLCLLAVLKLHTILLKKPEPITEDCTDERWKCFKNCLGALDGTLIDVTPPTEQKSRYR 120

Query: 187 TRKGEVATNVLGVCYYYLCDVGYPNAEGFLAPYRGQRDHLQE 201
           TRKG +ATNVLGVC YYL D GY NA+GFLAPYRGQR HL E
Sbjct: 121 TRKGSIATNVLGVCCYYLVDAGYCNADGFLAPYRGQRYHLNE 162

[Close]
BLAST of CSPI05G19400 vs. TrEMBL
Match: A0A068VE76_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00001334001 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.7e-40
Identity = 89/162 (54.94%), Postives = 101/162 (62.35%), Query Frame = 1 

Query: 67  MDRRTFSILCHLLRTIAGLTST------EIV----------------------DGETVSR 126
           MDRRTF ILC ++R   GL +T      EIV                        ETVSR
Sbjct: 1   MDRRTFGILCEMIRDTGGLKATRNMSIEEIVAMFVYVLAHHKKSRTICGLFWRSRETVSR 60

Query: 127 HFNLVLLAVLRLHNELLKKPQPVTNTCTDSRWSCFENCLGALDDTYIKVNMSQTDRHRYK 186
            FNL LLA+L+LH  LLKKP+P+T  CTD RW CF+NCLGALD T I V      + RY+
Sbjct: 61  QFNLCLLAILKLHTILLKKPEPITEDCTDERWKCFKNCLGALDGTLIDVTPPTEQKSRYR 120

Query: 187 TRKGEVATNVLGVCYYYLCDVGYPNAEGFLAPYRGQRDHLQE 201
           TRKG +ATNVLGVC YYL D GY NA+GFLAPYRGQR HL E
Sbjct: 121 TRKGSIATNVLGVCCYYLVDAGYCNADGFLAPYRGQRYHLNE 162

[Close]
BLAST of CSPI05G19400 vs. TrEMBL
Match: A5BND9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027369 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.5e-39
Identity = 104/262 (39.69%), Postives = 129/262 (49.24%), Query Frame = 1 

Query: 5   NIRTILVVFTSTHNQLVLLLDSLMNDNKRVTHKPYELRHQIRQLSYFRMIHSSDLVYCES 64
           N+ T L   T  H Q   L++   N            R  +R  +  R+I+ SD+   E 
Sbjct: 24  NMLTALCTTTRKHYQRRTLMERPAN------------REFLRVENLNRLIYGSDVACMEQ 83

Query: 65  TRMDRRTFSILCHLLRTIAGLTSTEIVD----------------------------GETV 124
            RMDR TF+ LC +LRTI  L  ++ +D                            GET+
Sbjct: 84  LRMDRHTFTTLCSMLRTIGKLKDSKYIDVEEMVALFLHILAHHVKNRVIKFRFLRSGETI 143

Query: 125 SRHFNLVLLAVLRLHNELLKKPQPVTNTCTDSRWSCFENCLGALDDTYIKVNMSQTDRHR 184
           SRHFN VL AV+RL   LLKKP+PV+   TD RW  F+NCLGALD TYIKVN+ + D+ R
Sbjct: 144 SRHFNAVLNAVIRLQGVLLKKPEPVSENSTDERWKWFKNCLGALDGTYIKVNVREGDKPR 203

Query: 185 YKTRKGEVATNVLGVC--------------------------------------YYYLCD 201
           Y+TRK E+ATNVLGVC                                      YYYL D
Sbjct: 204 YRTRKNEIATNVLGVCSQDMQFIYVLPGWEGSTSDSRVLRDAVSRRNGLTVPHGYYYLVD 263

[Close]
BLAST of CSPI05G19400 vs. NCBI nr
Match: gi|659109391|ref|XP_008454692.1| (PREDICTED: uncharacterized protein LOC103495048 [Cucumis melo])

HSP 1 Score: 272.3 bits (695), Expect = 6.7e-70
Identity = 147/266 (55.26%), Postives = 166/266 (62.41%), Query Frame = 1 

Query: 1   MDNQNIRTILVVFTSTHNQLVLLLDSLMNDNKRVTHKPYELRHQIRQLSYFRMIHSSDLV 60
           M    +  I+ VF ++  QL+L L+ L ND KR+TH PYE+RH+IRQL+YFRMIH SDLV
Sbjct: 1   MGEHELAYIVNVFIASQRQLLLTLELLKNDTKRITHIPYEIRHRIRQLAYFRMIHGSDLV 60

Query: 61  YCESTRMDRRTFSILCHLLRTIAGLTSTEIVD---------------------------- 120
             +STRMD+R F+ILCHLLRTIA LTSTE+VD                            
Sbjct: 61  CRQSTRMDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMYLHILAHDVKNRVIQREFMRS 120

Query: 121 GETVSRHFNLVLLAVLRLHNELLKKPQPVTNTCTDSRWSCFENCLGALDDTYIKVNMSQT 180
           GE +SRHFN+VLLAV+RLH ELLKKPQPV N CTD RW  FENCLGALD TYIKVN+  +
Sbjct: 121 GEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 181 DRHRYKTRKGEVATNVLGVC--------------------------------------YY 201
           DR RYKTRKGEVATNVLGVC                                      YY
Sbjct: 181 DRARYKTRKGEVATNVLGVCDTKGDFVYVLTDWEESDADSLILHDALSRPNGLKVPKGYY 240

[Close]
BLAST of CSPI05G19400 vs. NCBI nr
Match: gi|659113203|ref|XP_008456452.1| (PREDICTED: uncharacterized protein LOC103496395 [Cucumis melo])

HSP 1 Score: 258.1 bits (658), Expect = 1.3e-65
Identity = 133/206 (64.56%), Postives = 149/206 (72.33%), Query Frame = 1 

Query: 23  LLDSLMNDNKRVTHKPYELRHQIRQLSYFRMIHSSDLVYCESTRMDRRTFSILCHLLRTI 82
           +L+ L ND KRVTH PYE RH+IRQL+YFRMIH SDLV  +STRM+RR F+ILCHLLRTI
Sbjct: 1   MLELLKNDTKRVTHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMNRRCFAILCHLLRTI 60

Query: 83  AGLTSTEIVD----------------------------GETVSRHFNLVLLAVLRLHNEL 142
           AGLTST++VD                             ET+SRHFN+VLLAV+RLH EL
Sbjct: 61  AGLTSTKVVDVEEMVAMFLHILAHDVKNRVIQREFMRSSETISRHFNMVLLAVIRLHKEL 120

Query: 143 LKKPQPVTNTCTDSRWSCFENCLGALDDTYIKVNMSQTDRHRYKTRKGEVATNVLGVCYY 201
           LKKPQPV N CT+ RW  FENCLGALD  YIKVN+  +DR RY+TRKGEVATNV    YY
Sbjct: 121 LKKPQPVPNDCTNQRWRWFENCLGALDGMYIKVNVPASDRARYRTRKGEVATNV-PKGYY 180

[Close]
BLAST of CSPI05G19400 vs. NCBI nr
Match: gi|659131061|ref|XP_008465488.1| (PREDICTED: uncharacterized protein LOC103503107 [Cucumis melo])

HSP 1 Score: 240.4 bits (612), Expect = 2.8e-60
Identity = 127/228 (55.70%), Postives = 146/228 (64.04%), Query Frame = 1 

Query: 1   MDNQNIRTILVVFTSTHNQLVLLLDSLMNDNKRVTHKPYELRHQIRQLSYFRMIHSSDLV 60
           MD   + +I+  F ++  QL+L+L+ L ND KR+TH PYE RH+IRQL+YFRMIH S+LV
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSNLV 60

Query: 61  YCESTRMDRRTFSILCHLLRTIAGLTSTEIVD---------------------------- 120
              STRMDRR F ILCHLLRTIAGLTSTE++D                            
Sbjct: 61  CRRSTRMDRRCFVILCHLLRTIAGLTSTEVIDVEEMVAMFLHILAHNVKNRVIQREFMWS 120

Query: 121 GETVSRHFNLVLLAVLRLHNELLKKPQPVTNTCTDSRWSCFENCLGALDDTYIKVNMSQT 180
            ET+ RHFN+VLLAV+RLH ELLKKPQPV N CT  RW  FENCLGALD TYIKVN+  +
Sbjct: 121 SETIFRHFNMVLLAVIRLHEELLKKPQPVPNECTYQRWRWFENCLGALDRTYIKVNIPAS 180

Query: 181 DRHRYKTRKGEVATNVLGVCYYYLCDVGYPNAEGFLAPYRGQRDHLQE 201
           DR                  YYYL DVGYPN EGFLAPYR QR HLQE
Sbjct: 181 DR----------------ASYYYLVDVGYPNTEGFLAPYRSQRYHLQE 212

[Close]
BLAST of CSPI05G19400 vs. NCBI nr
Match: gi|307136287|gb|ADN34114.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 232.3 bits (591), Expect = 7.7e-58
Identity = 131/266 (49.25%), Postives = 149/266 (56.02%), Query Frame = 1 

Query: 1   MDNQNIRTILVVFTSTHNQLVLLLDSLMNDNKRVTHKPYELRHQIRQLSYFRMIHSSDLV 60
           MD   + +I+  F ++  QL+L+L+ L ND KR+TH PYE RH+IRQL+YFRMIH     
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHG---- 60

Query: 61  YCESTRMDRRTFSILCHLLRTIAGLTSTEIVD---------------------------- 120
                               TIAGLTSTE+VD                            
Sbjct: 61  --------------------TIAGLTSTEVVDVEEMVAMFLHILAHDVKSRVIKREFMRS 120

Query: 121 GETVSRHFNLVLLAVLRLHNELLKKPQPVTNTCTDSRWSCFENCLGALDDTYIKVNMSQT 180
           GET+SRHFN+VLLAV+RLH ELLKKPQPV N CTD RW  FENCLGALD TYIKVN+  +
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 181 DRHRYKTRKGEVATNVLGVC--------------------------------------YY 201
           DR RY+TRKGEVATNVLGVC                                      YY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

[Close]
BLAST of CSPI05G19400 vs. NCBI nr
Match: gi|307135889|gb|ADN33754.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 219.5 bits (558), Expect = 5.1e-54
Identity = 116/214 (54.21%), Postives = 130/214 (60.75%), Query Frame = 1 

Query: 53  MIHSSDLVYCESTRMDRRTFSILCHLLRTIAGLTSTEIVD-------------------- 112
           MIH SDLV  +STRMDRRTF+ILCHLLR +AGL+STEIVD                    
Sbjct: 1   MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 60

Query: 113 --------GETVSRHFNLVLLAVLRLHNELLKKPQPVTNTCTDSRWSCFENCLGALDDTY 172
                   GETVSRHFN+VLLAVLRL+ EL+K+P PVT+ C D RW CFENCLGALD TY
Sbjct: 61  IQQEFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTY 120

Query: 173 IKVNMSQTDRHRYKTRKGEVATNVLGVC-------------------------------- 201
           IKVN+   DR  ++TRKGE+ATNVLGVC                                
Sbjct: 121 IKVNVPAGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRILRDAISQENG 180

The following BLAST results are available for this feature:
BLAST of CSPI05G19400 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI05G19400 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GCB5_CUCME5.3e-5849.25Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
E5GBB2_CUCME3.6e-5454.21Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A068UN28_COFCA1.3e-4055.56Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019523001 PE=4 SV=1[more]
A0A068VE76_COFCA1.7e-4054.94Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00001334001 PE=4 SV=1[more]
A5BND9_VITVI1.5e-3939.69Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027369 PE=4 SV=1[more]
BLAST of CSPI05G19400 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI05G19400 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659109391|ref|XP_008454692.1|6.7e-7055.26PREDICTED: uncharacterized protein LOC103495048 [Cucumis melo][more]
gi|659113203|ref|XP_008456452.1|1.3e-6564.56PREDICTED: uncharacterized protein LOC103496395 [Cucumis melo][more]
gi|659131061|ref|XP_008465488.1|2.8e-6055.70PREDICTED: uncharacterized protein LOC103503107 [Cucumis melo][more]
gi|307136287|gb|ADN34114.1|7.7e-5849.25retrotransposon protein [Cucumis melo subsp. melo][more]
gi|307135889|gb|ADN33754.1|5.1e-5454.21retrotransposon protein [Cucumis melo subsp. melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G19400.1CSPI05G19400.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR22930UNCHARACTERIZEDcoord: 2..200
score: 5.5
NoneNo IPR availablePANTHERPTHR22930:SF27SUBFAMILY NOT NAMEDcoord: 2..200
score: 5.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI05G19400Cucsa.280200Cucumber (Gy14) v1cgycpiB421
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI05G19400Melon (DHL92) v3.6.1cpimedB331
CSPI05G19400Cucumber (Gy14) v2cgybcpiB225
CSPI05G19400Silver-seed gourdcarcpiB0464
CSPI05G19400Silver-seed gourdcarcpiB0915
CSPI05G19400Silver-seed gourdcarcpiB0990
CSPI05G19400Cucumber (Chinese Long) v3cpicucB284
CSPI05G19400Watermelon (97103) v2cpiwmbB358
CSPI05G19400Wax gourdcpiwgoB453
CSPI05G19400Cucurbita maxima (Rimu)cmacpiB306
CSPI05G19400Cucurbita maxima (Rimu)cmacpiB738
CSPI05G19400Cucurbita moschata (Rifu)cmocpiB298
CSPI05G19400Cucurbita moschata (Rifu)cmocpiB730
CSPI05G19400Cucumber (Chinese Long) v2cpicuB239
CSPI05G19400Melon (DHL92) v3.5.1cpimeB342
CSPI05G19400Watermelon (Charleston Gray)cpiwcgB388
CSPI05G19400Watermelon (97103) v1cpiwmB425
CSPI05G19400Cucurbita pepo (Zucchini)cpecpiB179
CSPI05G19400Cucurbita pepo (Zucchini)cpecpiB422
CSPI05G19400Bottle gourd (USVL1VR-Ls)cpilsiB329