CSPI05G19350 (gene) Wild cucumber (PI 183967)

NameCSPI05G19350
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionRetrotransposable element Tf2
LocationChr5 : 20622535 .. 20623720 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGTGATATCAAAATTTATGTTGACCAATGCCCAGTTTGCCAACAAAACAAAATACAAGCCTTGTCTCCAGCTGGTTTGTTGCTGCCCCTTCCCAATCCCAACAGAATTTGGGAAGATATATCAATGGATTTCATAGAAGGCTTGCCACGATCTAAGGGGTTTGACATGATCCTTGTGGTAGTAGATCGTCTTAGCAAATATGCTCACTTTTTAACCTTGGGACACCCATTTTCAGCCAAAACAGTAGCCACACTGTTTATAAAGGAAGTGGTTCGTCTCCATGGGTACCCTCGCTCTATTGTATCCGATAGGGACCGTATGTTTTTGAGTCACTTTTGGAAAGAGATGTTCCGTTTGCAAGGAACTCAATTGAAGAGAAGTACGGCCTATCACTCGCAAACGGATGGGCAATCAGAAGTTGTGAACAAGAGTGTGGAGTTGTACTTGCGATGTTTTTGTCATGAAAAACCAACGACATGGAGTGAAAAATTAGCATGGGTAGAGTATTGACACAACACCACCTACCACGCATCCATACAGAATACTCCTTATGCAGTCGTTTATGGACGACCCCCCTCCAATTATTTCATATGGACATCCGAGTTCCACTCCAAATGATTCAGTAGAATCACAGTTGCAGTCTAGAGATGAGCTGCTGATTACTCTAAAGCATCACTTGCAACACGCCCAAGCACAAGTGAAGAATCTTGTGGACATACACCGTCGAGATGTGGTGTTTGACATTGGCGATTGGGTATATTTAGAAATACAACCGTATAAACAGTAGTCATTGGCTAAAAAACGTTACGAAAAGCTGTCACCAAATTTTTTTGGACCATACATGGTATTGGGGAGGATAGGGGAAGTAGCCTATTTGCTAGATCTACCAGATAATGCTCGAATCCACCTTGTTTTCCACATGTCACAACTGAAGAAGGCAGTGGGAGACAAGCATCATGTGCAGCCAAACATTTCCCTACTCAACGACCAAATGGAATTAGTGCTCGAGCCTGAAAATGTGACTGAACTGTGCTGGAATGATACCGAACGTGATTGGGAGTATTTAGTTCAGTGGAAAGATCAACCAGCACACGAAGCCACTTGGGAATCTGTTAGACCTCCAATATTATATCAGTACAGGAGGAGGGGAAATAAGTTTGTTAAGGGGGGAGACGTGTGA

mRNA sequence

ATGAAGAGTGATATCAAAATTTATGTTGACCAATGCCCAGTTTGCCAACAAAACAAAATACAAGCCTTGTCTCCAGCTGGTTTGTTGCTGCCCCTTCCCAATCCCAACAGAATTTGGGAAGATATATCAATGGATTTCATAGAAGGCTTGCCACGATCTAAGGGGTTTGACATGATCCTTGTGGTAGTAGATCGTCTTAGCAAATATGCTCACTTTTTAACCTTGGGACACCCATTTTCAGCCAAAACAGTAGCCACACTGTTTATAAAGGAAGTGGTTCGTCTCCATGGGTACCCTCGCTCTATTGTATCCGATAGGGACCGTATGTTTTTGAGTCACTTTTGGAAAGAGATGTTCCGTTTGCAAGGAACTCAATTGAAGAGAAGTACGGCCTATCACTCGCAAACGGATGGGCAATCAGAAGTTGTGAACAAGAGTGTGGAGTTAATACTCCTTATGCAGTCGTTTATGGACGACCCCCCTCCAATTATTTCATATGGACATCCGAGTTCCACTCCAAATGATTCAGTAGAATCACAGTTGCAGTCTAGAGATGAGCTGCTGATTACTCTAAAGCATCACTTGCAACACGCCCAAGCACAAGTGAAGAATCTTGTGGACATACACCGTCGAGATGTGGTGTTTGACATTGGCGATTGGTCATTGGCTAAAAAACGTTACGAAAAGCTGTCACCAAATTTTTTTGGACCATACATGGTATTGGGGAGGATAGGGGAAGTAGCCTATTTGCTAGATCTACCAGATAATGCTCGAATCCACCTTGTTTTCCACATGTCACAACTGAAGAAGGCAGTGGGAGACAAGCATCATGTGCAGCCAAACATTTCCCTACTCAACGACCAAATGGAATTAGTGCTCGAGCCTGAAAATGTGACTGAACTGTGCTGGAATGATACCGAACGTGATTGGGAGTATTTAGTTCAGTGGAAAGATCAACCAGCACACGAAGCCACTTGGGAATCTGTTAGACCTCCAATATTATATCAGTACAGGAGGAGGGGAAATAAGTTTGTTAAGGGGGGAGACGTGTGA

Coding sequence (CDS)

ATGAAGAGTGATATCAAAATTTATGTTGACCAATGCCCAGTTTGCCAACAAAACAAAATACAAGCCTTGTCTCCAGCTGGTTTGTTGCTGCCCCTTCCCAATCCCAACAGAATTTGGGAAGATATATCAATGGATTTCATAGAAGGCTTGCCACGATCTAAGGGGTTTGACATGATCCTTGTGGTAGTAGATCGTCTTAGCAAATATGCTCACTTTTTAACCTTGGGACACCCATTTTCAGCCAAAACAGTAGCCACACTGTTTATAAAGGAAGTGGTTCGTCTCCATGGGTACCCTCGCTCTATTGTATCCGATAGGGACCGTATGTTTTTGAGTCACTTTTGGAAAGAGATGTTCCGTTTGCAAGGAACTCAATTGAAGAGAAGTACGGCCTATCACTCGCAAACGGATGGGCAATCAGAAGTTGTGAACAAGAGTGTGGAGTTAATACTCCTTATGCAGTCGTTTATGGACGACCCCCCTCCAATTATTTCATATGGACATCCGAGTTCCACTCCAAATGATTCAGTAGAATCACAGTTGCAGTCTAGAGATGAGCTGCTGATTACTCTAAAGCATCACTTGCAACACGCCCAAGCACAAGTGAAGAATCTTGTGGACATACACCGTCGAGATGTGGTGTTTGACATTGGCGATTGGTCATTGGCTAAAAAACGTTACGAAAAGCTGTCACCAAATTTTTTTGGACCATACATGGTATTGGGGAGGATAGGGGAAGTAGCCTATTTGCTAGATCTACCAGATAATGCTCGAATCCACCTTGTTTTCCACATGTCACAACTGAAGAAGGCAGTGGGAGACAAGCATCATGTGCAGCCAAACATTTCCCTACTCAACGACCAAATGGAATTAGTGCTCGAGCCTGAAAATGTGACTGAACTGTGCTGGAATGATACCGAACGTGATTGGGAGTATTTAGTTCAGTGGAAAGATCAACCAGCACACGAAGCCACTTGGGAATCTGTTAGACCTCCAATATTATATCAGTACAGGAGGAGGGGAAATAAGTTTGTTAAGGGGGGAGACGTGTGA
BLAST of CSPI05G19350 vs. Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-30
Identity = 96/308 (31.17%), Postives = 144/308 (46.75%), Query Frame = 1

Query: 8    YVDQCPVCQQNKIQALSPAGLLLPLPNPNRIWEDISMDFIEGLP-RSKGFDMILVVVDRL 67
            Y+  C  CQ  K       GLL PLP     W DISMDF+ GLP  S   +MILVVVDR 
Sbjct: 1138 YIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRF 1197

Query: 68   SKYAHFLTLGHPFSAKTVATLFIKEVVRLHGYPRSIVSDRDRMFLSHFWKEMFRLQGTQL 127
            SK AHF+       A  +  L  + +   HG+PR+I SDRD    +  ++E+ +  G + 
Sbjct: 1198 SKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKS 1257

Query: 128  KRSTAYHSQTDGQSEVVNKSVELILLMQS---------------FMDDPPPI-------- 187
              S+A H QTDGQSE   +++  +L   +               F+ +  P         
Sbjct: 1258 TMSSANHPQTDGQSERTIQTLNRLLRAYASTNIQNWHVYLPQIEFVYNSTPTRTLGKSPF 1317

Query: 188  -ISYGHPSSTPNDSVESQLQSRD-----------ELLITLKHHLQHAQAQVKNLVDIHRR 247
             I  G+  +TP    + ++ +R             L I  K  L+HAQ +++   +  R+
Sbjct: 1318 EIDLGYLPNTPAIKSDDEVNARSFTAVELAKHLKALTIQTKEQLEHAQIEMETNNNQRRK 1377

Query: 248  DVVFDIGDWSLA-------KKRYEKLSPNFFGPYMVLGRIGEVAYLLDLPDNARIHLVFH 273
             ++ +IGD  L        K  Y K+   + GP+ V+ +I + AY LDL  + + H V +
Sbjct: 1378 PLLLNIGDHVLVHRDAYFKKGAYMKVQQIYVGPFRVVKKINDNAYELDLNSHKKKHRVIN 1437

BLAST of CSPI05G19350 vs. Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-I PE=3 SV=2)

HSP 1 Score: 132.1 bits (331), Expect = 1.2e-29
Identity = 94/305 (30.82%), Postives = 143/305 (46.89%), Query Frame = 1

Query: 8    YVDQCPVCQQNKIQALSPAGLLLPLPNPNRIWEDISMDFIEGLP-RSKGFDMILVVVDRL 67
            Y+  C  CQ  K       GLL PLP     W DISMDF+ GLP  S   +MILVVVDR 
Sbjct: 1164 YIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRF 1223

Query: 68   SKYAHFLTLGHPFSAKTVATLFIKEVVRLHGYPRSIVSDRDRMFLSHFWKEMFRLQGTQL 127
            SK AHF+       A  +  L  + +   HG+PR+I SDRD    +  ++E+ +  G + 
Sbjct: 1224 SKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKS 1283

Query: 128  KRSTAYHSQTDGQSEVVNKSVELILL------MQSF------------------MDDPPP 187
              S+A H QTDGQSE   +++  +L       +Q++                  +   P 
Sbjct: 1284 TMSSANHPQTDGQSERTIQTLNRLLRAYVSTNIQNWHVYLPQIEFVYNSTPTRTLGKSPF 1343

Query: 188  IISYGHPSSTPNDSVESQLQSRD-----------ELLITLKHHLQHAQAQVKNLVDIHRR 247
             I  G+  +TP    + ++ +R             L I  K  L+HAQ +++   +  R+
Sbjct: 1344 EIDLGYLPNTPAIKSDDEVNARSFTAVELAKHLKALTIQTKEQLEHAQIEMETNNNQRRK 1403

Query: 248  DVVFDIGDWSLA-------KKRYEKLSPNFFGPYMVLGRIGEVAYLLDLPDNARIHLVFH 270
             ++ +IGD  L        K  Y K+   + GP+ V+ +I + AY LDL  + + H V +
Sbjct: 1404 PLLLNIGDHVLVHRDAYFKKGAYMKVQQIYVGPFRVVKKINDNAYELDLNSHKKKHRVIN 1463

BLAST of CSPI05G19350 vs. Swiss-Prot
Match: TF28_SCHPO (Transposon Tf2-8 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-8 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.9e-26
Identity = 59/151 (39.07%), Postives = 84/151 (55.63%), Query Frame = 1

Query: 1    MKSDIKIYVDQCPVCQQNKIQALSPAGLLLPLPNPNRIWEDISMDFIEGLPRSKGFDMIL 60
            ++  I+ YV  C  CQ NK +   P G L P+P   R WE +SMDFI  LP S G++ + 
Sbjct: 946  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALF 1005

Query: 61   VVVDRLSKYAHFLTLGHPFSAKTVATLFIKEVVRLHGYPRSIVSDRDRMFLSHFWKEMFR 120
            VVVDR SK A  +      +A+  A +F + V+   G P+ I++D D +F S  WK+   
Sbjct: 1006 VVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAH 1065

Query: 121  LQGTQLKRSTAYHSQTDGQSEVVNKSVELIL 152
                 +K S  Y  QTDGQ+E  N++VE +L
Sbjct: 1066 KYNFVMKFSLPYRPQTDGQTERTNQTVEKLL 1096

BLAST of CSPI05G19350 vs. Swiss-Prot
Match: TF25_SCHPO (Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-5 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.9e-26
Identity = 59/151 (39.07%), Postives = 84/151 (55.63%), Query Frame = 1

Query: 1    MKSDIKIYVDQCPVCQQNKIQALSPAGLLLPLPNPNRIWEDISMDFIEGLPRSKGFDMIL 60
            ++  I+ YV  C  CQ NK +   P G L P+P   R WE +SMDFI  LP S G++ + 
Sbjct: 946  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALF 1005

Query: 61   VVVDRLSKYAHFLTLGHPFSAKTVATLFIKEVVRLHGYPRSIVSDRDRMFLSHFWKEMFR 120
            VVVDR SK A  +      +A+  A +F + V+   G P+ I++D D +F S  WK+   
Sbjct: 1006 VVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAH 1065

Query: 121  LQGTQLKRSTAYHSQTDGQSEVVNKSVELIL 152
                 +K S  Y  QTDGQ+E  N++VE +L
Sbjct: 1066 KYNFVMKFSLPYRPQTDGQTERTNQTVEKLL 1096

BLAST of CSPI05G19350 vs. Swiss-Prot
Match: TF24_SCHPO (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.9e-26
Identity = 59/151 (39.07%), Postives = 84/151 (55.63%), Query Frame = 1

Query: 1    MKSDIKIYVDQCPVCQQNKIQALSPAGLLLPLPNPNRIWEDISMDFIEGLPRSKGFDMIL 60
            ++  I+ YV  C  CQ NK +   P G L P+P   R WE +SMDFI  LP S G++ + 
Sbjct: 946  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALF 1005

Query: 61   VVVDRLSKYAHFLTLGHPFSAKTVATLFIKEVVRLHGYPRSIVSDRDRMFLSHFWKEMFR 120
            VVVDR SK A  +      +A+  A +F + V+   G P+ I++D D +F S  WK+   
Sbjct: 1006 VVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAH 1065

Query: 121  LQGTQLKRSTAYHSQTDGQSEVVNKSVELIL 152
                 +K S  Y  QTDGQ+E  N++VE +L
Sbjct: 1066 KYNFVMKFSLPYRPQTDGQTERTNQTVEKLL 1096

BLAST of CSPI05G19350 vs. TrEMBL
Match: A5CAG1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018166 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 5.4e-90
Identity = 182/376 (48.40%), Postives = 242/376 (64.36%), Query Frame = 1

Query: 1   MKSDIKIYVDQCPVCQQNKIQALSPAGLLLPLPNPNRIWEDISMDFIEGLPRSKGFDMIL 60
           MK+DIK +V++C VCQQNK   LS AGLL PLP P++IW+D++MDFIEGLP+S+G++ IL
Sbjct: 613 MKNDIKEFVEKCLVCQQNKTLTLSLAGLLQPLPIPDKIWDDVTMDFIEGLPKSEGYNFIL 672

Query: 61  VVVDRLSKYAHFLTLGHPFSAKTVATLFIKEVVRLHGYPRSIVSDRDRMFLSHFWKEMFR 120
           VVVDRLSKYAHF  L HPF A+TVA +F+++VV+LHG+PRSI+SDRD++FLS FW E+FR
Sbjct: 673 VVVDRLSKYAHFSLLKHPFXAQTVAAIFVRDVVKLHGFPRSIISDRDKVFLSRFWIELFR 732

Query: 121 LQGTQLKRSTAYHSQTDGQSEVVNKSVELILLMQSFMD---------------------- 180
           LQGT L  STAYH QTDGQ+EVVN+ VE  L   S+                        
Sbjct: 733 LQGTSLXHSTAYHXQTDGQTEVVNRCVETYLRCFSYNKPGRWSTWISWAEYWYNTTFHSS 792

Query: 181 ------------DPPPIISYGHPSSTPNDSVESQLQSRDELLITLKHHLQHAQAQVKNLV 240
                       DPPP+I +G   ST   +V+  LQ RD +L  LK HL  AQ+++K+  
Sbjct: 793 TNTTPFRAVYGRDPPPLIRFG-SDSTSVLAVDQLLQERDLILNELKDHLXCAQSKMKSSX 852

Query: 241 DIHRRDVVFDIGDW-----------SLAKKRYEKLSPNFFGPYMVLGRIGEVAYLLDLPD 300
           D HR  V F++GD+           SLAK+  EKLSP +FGPY V+ +I  VAY L+LP 
Sbjct: 853 DAHRXAVQFEVGDFVYIKLRPYXLRSLAKRPNEKLSPRYFGPYKVVXQIXXVAYRLELPX 912

Query: 301 NARIHLVFHMSQLKKAVGDKHHVQPNISLLNDQMELVLEPENVTEL--CWNDTERDWEYL 330
           +  IH VFH+S LK+A+G     QP   +L + +E ++EP+ V ++    N+ +   E L
Sbjct: 913 STTIHXVFHVSXLKRALGSADLCQPLSPILVEDLEWLVEPDQVLDIHQSPNNNQLGIEVL 972

BLAST of CSPI05G19350 vs. TrEMBL
Match: E2DMZ5_BETVU (Putative uncharacterized protein OS=Beta vulgaris PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 5.2e-85
Identity = 189/427 (44.26%), Postives = 240/427 (56.21%), Query Frame = 1

Query: 1    MKSDIKIYVDQCPVCQQNKIQALSPAGLLLPLPNPNRIWEDISMDFIEGLPRSKGFDMIL 60
            MK D+  +V  C +CQQ K   LSPAGLL PLP P  IWEDISMDF+EGLP+S+G+D IL
Sbjct: 1137 MKKDVTTFVQNCQICQQFKTSTLSPAGLLQPLPIPLAIWEDISMDFVEGLPKSQGWDTIL 1196

Query: 61   VVVDRLSKYAHFLTLGHPFSAKTVATLFIKEVVRLHGYPRSIVSDRDRMFLSHFWKEMFR 120
            VVVDRLSKYAHF+TL HPF+A TVA +FIKE+V+LHG+P +IVSDRD++F+S FWKE+F+
Sbjct: 1197 VVVDRLSKYAHFITLKHPFTAPTVAAVFIKEIVKLHGFPSTIVSDRDKVFMSLFWKELFK 1256

Query: 121  LQGTQLKRSTAYHSQTDGQSEVVNKSVELIL----------------------------- 180
            LQGT L RSTAYH Q+DGQ+EVVNKS+E  L                             
Sbjct: 1257 LQGTLLHRSTAYHPQSDGQTEVVNKSLEAYLRCFCNGRPKAWAQWISWAEYWYNTSTHSS 1316

Query: 181  -----LMQSFMDDPPPIISYGHPSSTPNDSVESQLQSRDELLITLKHHLQHAQAQVKNLV 240
                     +  D PP+  +    ST   S+E QL  RD  L  LK HL  AQ  +K   
Sbjct: 1317 SHFTPFKIVYGRDSPPLFRF-EKGSTAIFSLEEQLLDRDATLDELKFHLLEAQNSMKIQE 1376

Query: 241  DIHRRDVVFDIG-----------DWSLAKKRYEKLSPNFFGPYMVLGRIGEVAYLLDLPD 300
            D HRR V F+ G             SLAKKR EKL+P F+GP+ VL RIG+VAY L LP 
Sbjct: 1377 DKHRRAVHFEPGAMVYLKIQPYRHQSLAKKRNEKLAPRFYGPFSVLKRIGQVAYQLQLPL 1436

Query: 301  NARIHLVFHMSQLKKAVGDKHHVQPNISLLNDQMELVLEPENVTELCWNDTE--RDWEYL 351
             A++H VFH+SQLKKAVG           L + + L  +PE++  +  +  +     E L
Sbjct: 1437 GAKLHPVFHISQLKKAVGSLQSSPTIPPQLTNDLVLDAQPESLLNIRSHPQKPAEVTEVL 1496

BLAST of CSPI05G19350 vs. TrEMBL
Match: J3SDF5_BETVU (Ty3/gypsy retrotransposon protein OS=Beta vulgaris subsp. vulgaris PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 6.8e-85
Identity = 185/417 (44.36%), Postives = 240/417 (57.55%), Query Frame = 1

Query: 1    MKSDIKIYVDQCPVCQQNKIQALSPAGLLLPLPNPNRIWEDISMDFIEGLPRSKGFDMIL 60
            M+ ++  YV QC +CQQ K+    P GLL PLP P+ +WEDISMDFIEGLP SKG D IL
Sbjct: 1204 MRQEVARYVHQCLICQQQKVSQQHPRGLLQPLPIPSLVWEDISMDFIEGLPVSKGVDTIL 1263

Query: 61   VVVDRLSKYAHFLTLGHPFSAKTVATLFIKEVVRLHGYPRSIVSDRDRMFLSHFWKEMFR 120
            V+VDRLSKYAHFLTL HPF+A  VA LF+KEVVRLHG+P SIVSDRDR+FLS FWKE+FR
Sbjct: 1264 VIVDRLSKYAHFLTLRHPFTALMVADLFVKEVVRLHGFPSSIVSDRDRIFLSLFWKELFR 1323

Query: 121  LQGTQLKRSTAYHSQTDGQSEVVNKSVELIL-----------------LMQSFMDDP--- 180
            L GT LKRS+AYH QTDGQ+E+VN+++E  L                    S+   P   
Sbjct: 1324 LHGTTLKRSSAYHPQTDGQTEIVNRALETYLRCFVGGHPRSWAKWLPWAEFSYNTSPHTS 1383

Query: 181  -------------PPIISYGHPSSTPNDSVESQLQSRDELLITLKHHLQHAQAQVKNLVD 240
                         PP +       T  +S+E+ LQ RD ++  L+ +L  AQ ++K+  D
Sbjct: 1384 TKMSPFKVLYGRDPPHVVRAPKGQTSVESLEAMLQDRDAIIDDLQVNLVRAQQRMKHYAD 1443

Query: 241  IHRRDVVFDIGD-----------WSLAKKRYEKLSPNFFGPYMVLGRIGEVAYLLDLPDN 300
              R +V F +GD            SLAK+ +EKL+P F+GP+ VL RIG  AY L LP +
Sbjct: 1444 GSRTEVEFQVGDAVFLRLQPYRQRSLAKRPFEKLAPRFYGPFTVLQRIGATAYKLQLPPS 1503

Query: 301  ARIHLVFHMSQLKKAVGDKHHVQPNISLLNDQMELVLEPENVTEL--CWNDTERDWEYLV 344
            ++IH VFH+S LKK VG+   +      ++  MELV+EPE + ++       +   E L+
Sbjct: 1504 SKIHPVFHVSLLKKVVGNTPVLPTIPPHIDVDMELVVEPEELLDVRQIRQGKQTFTECLI 1563

BLAST of CSPI05G19350 vs. TrEMBL
Match: G9FIF5_BETVU (Putative uncharacterized protein OS=Beta vulgaris PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 7.6e-84
Identity = 182/378 (48.15%), Postives = 230/378 (60.85%), Query Frame = 1

Query: 1    MKSDIKIYVDQCPVCQQNKIQALSPAGLLLPLPNPNRIWEDISMDFIEGLPRSKGFDMIL 60
            MK D+  ++ +C VCQQNK  +L+PAGLL PLP P  IWED+SMDF+EGLP+S G+D IL
Sbjct: 973  MKQDVITFIQECAVCQQNKTSSLAPAGLLQPLPIPTLIWEDVSMDFVEGLPKSGGWDSIL 1032

Query: 61   VVVDRLSKYAHFLTLGHPFSAKTVATLFIKEVVRLHGYPRSIVSDRDRMFLSHFWKEMFR 120
            VVVDRLSKY HF+ L HPFSA TVA +FIKEVV+LHG+P +IVSDRD++F+S FWKE+F+
Sbjct: 1033 VVVDRLSKYGHFIGLRHPFSAATVAQVFIKEVVKLHGFPTTIVSDRDKVFMSIFWKELFK 1092

Query: 121  LQGTQLKRSTAYHSQTDGQSEVVNKSVELILLMQSFMDDPPPI----------------- 180
            LQ T L RSTAYH Q DGQ+EVVNKSVE  L  + F+   P                   
Sbjct: 1093 LQRTLLHRSTAYHPQLDGQTEVVNKSVEASL--RCFIQGKPHTWANWLCWAEYWYNTFKH 1152

Query: 181  ---------ISYGHP---------SSTPNDSVESQLQSRDELLITLKHHLQHAQAQVKNL 240
                     + YG P         +ST   ++E QL  RD +L  LK HL  AQ  ++  
Sbjct: 1153 SATNFTPFEVVYGRPPPPLYRYKRNSTAVAALEDQLLVRDAVLDELKLHLVTAQNNMRTQ 1212

Query: 241  VDIHRRDVVFDIGDW-----------SLAKKRYEKLSPNFFGPYMVLGRIGEVAYLLDLP 300
             D HRR++ F +GD            SLAK+  EKL+P ++GP+ VL RIG VAY LDLP
Sbjct: 1213 EDKHRREMHFGVGDMVYLRLQPYKQRSLAKRLNEKLAPRYYGPFPVLKRIGTVAYELDLP 1272

Query: 301  DNARIHLVFHMSQLKKAVGDKHHVQPNISLLNDQMELVLEPENVTELCWNDTER--DWEY 331
             +++IH VFH+SQL+KAVG          LL   + L   P  V  +  N   +    E 
Sbjct: 1273 PHSKIHPVFHISQLRKAVGTAPVFPVLPPLLTTDLVLPSSPSQVLGIRPNPLNQAAPAEI 1332

BLAST of CSPI05G19350 vs. TrEMBL
Match: E5GC18_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 9.9e-84
Identity = 173/305 (56.72%), Postives = 199/305 (65.25%), Query Frame = 1

Query: 1    MKSDIKIYVDQCPVCQQNKIQALSPAGLLLPLPNPNRIWEDISMDFIEGLPRSKGFDMIL 60
            MK+DIKIYVDQCPVCQQNK QALSPAGLL PLP P+RIWEDISMDFIEGLPRS+ FD +L
Sbjct: 897  MKNDIKIYVDQCPVCQQNKTQALSPAGLLQPLPIPSRIWEDISMDFIEGLPRSRTFDSVL 956

Query: 61   VVVDRLSKYAHFLTLGHPFSAKTVATLFIKEVVRLHGYPRSIVSDRDRMFLSHFWKEMFR 120
            VVVD+LSKYAHF+ L HPFSAKTVA  F KE+                            
Sbjct: 957  VVVDQLSKYAHFVALRHPFSAKTVAVEFTKEI---------------------------- 1016

Query: 121  LQGTQLKRSTAYHSQTDGQSEVVNKSVELIL------LMQSFMDD--------------- 180
              GT+LKRSTAYH QTDGQ+EVVNK +EL L        +++ D                
Sbjct: 1017 --GTKLKRSTAYHPQTDGQTEVVNKCLELYLRCLCQDRSKTWSDKLAWAEYWYNTNYHAS 1076

Query: 181  -------------PPPIISYGHPSSTPNDSVESQLQSRDELLITLKHHLQHAQAQVKNLV 240
                         PPPIISYG  ++TPNDSVE QLQ+RDE L TLK HLQHAQ Q+K   
Sbjct: 1077 IKTTPYAVVYGQPPPPIISYGQGNTTPNDSVEFQLQTRDETLATLKRHLQHAQDQMKKFA 1136

Query: 241  DIHRRDVVFDIGDW-----------SLAKKRYEKLSPNFFGPYMVLGRIGEVAYLLDLPD 261
            ++HRRDVVFDI DW           S+AK+R +KLSP +FGPYMV+GR+GEVAYLLDLPD
Sbjct: 1137 NVHRRDVVFDIEDWVYLKLQPYRQKSVAKRRCDKLSPKYFGPYMVMGRVGEVAYLLDLPD 1171

BLAST of CSPI05G19350 vs. NCBI nr
Match: gi|147807720|emb|CAN66553.1| (hypothetical protein VITISV_018166 [Vitis vinifera])

HSP 1 Score: 339.3 bits (869), Expect = 7.8e-90
Identity = 182/376 (48.40%), Postives = 242/376 (64.36%), Query Frame = 1

Query: 1   MKSDIKIYVDQCPVCQQNKIQALSPAGLLLPLPNPNRIWEDISMDFIEGLPRSKGFDMIL 60
           MK+DIK +V++C VCQQNK   LS AGLL PLP P++IW+D++MDFIEGLP+S+G++ IL
Sbjct: 613 MKNDIKEFVEKCLVCQQNKTLTLSLAGLLQPLPIPDKIWDDVTMDFIEGLPKSEGYNFIL 672

Query: 61  VVVDRLSKYAHFLTLGHPFSAKTVATLFIKEVVRLHGYPRSIVSDRDRMFLSHFWKEMFR 120
           VVVDRLSKYAHF  L HPF A+TVA +F+++VV+LHG+PRSI+SDRD++FLS FW E+FR
Sbjct: 673 VVVDRLSKYAHFSLLKHPFXAQTVAAIFVRDVVKLHGFPRSIISDRDKVFLSRFWIELFR 732

Query: 121 LQGTQLKRSTAYHSQTDGQSEVVNKSVELILLMQSFMD---------------------- 180
           LQGT L  STAYH QTDGQ+EVVN+ VE  L   S+                        
Sbjct: 733 LQGTSLXHSTAYHXQTDGQTEVVNRCVETYLRCFSYNKPGRWSTWISWAEYWYNTTFHSS 792

Query: 181 ------------DPPPIISYGHPSSTPNDSVESQLQSRDELLITLKHHLQHAQAQVKNLV 240
                       DPPP+I +G   ST   +V+  LQ RD +L  LK HL  AQ+++K+  
Sbjct: 793 TNTTPFRAVYGRDPPPLIRFG-SDSTSVLAVDQLLQERDLILNELKDHLXCAQSKMKSSX 852

Query: 241 DIHRRDVVFDIGDW-----------SLAKKRYEKLSPNFFGPYMVLGRIGEVAYLLDLPD 300
           D HR  V F++GD+           SLAK+  EKLSP +FGPY V+ +I  VAY L+LP 
Sbjct: 853 DAHRXAVQFEVGDFVYIKLRPYXLRSLAKRPNEKLSPRYFGPYKVVXQIXXVAYRLELPX 912

Query: 301 NARIHLVFHMSQLKKAVGDKHHVQPNISLLNDQMELVLEPENVTEL--CWNDTERDWEYL 330
           +  IH VFH+S LK+A+G     QP   +L + +E ++EP+ V ++    N+ +   E L
Sbjct: 913 STTIHXVFHVSXLKRALGSADLCQPLSPILVEDLEWLVEPDQVLDIHQSPNNNQLGIEVL 972

BLAST of CSPI05G19350 vs. NCBI nr
Match: gi|731338584|ref|XP_010680400.1| (PREDICTED: transposon Tf2-1 polyprotein isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 339.3 bits (869), Expect = 7.8e-90
Identity = 178/376 (47.34%), Postives = 237/376 (63.03%), Query Frame = 1

Query: 1    MKSDIKIYVDQCPVCQQNKIQALSPAGLLLPLPNPNRIWEDISMDFIEGLPRSKGFDMIL 60
            M+ ++  YV  C +CQQNK    +PAGLL PLP PN++WEDI+MDF+EGLP S+G D IL
Sbjct: 1153 MRKNVAQYVKDCQICQQNKTSTQNPAGLLQPLPPPNQVWEDITMDFVEGLPPSRGVDTIL 1212

Query: 61   VVVDRLSKYAHFLTLGHPFSAKTVATLFIKEVVRLHGYPRSIVSDRDRMFLSHFWKEMFR 120
            VVVDR +K+AHFL L HPF+A TVA  FIKE+VRLHG+P SI+SDRDR+F+S FWKE+FR
Sbjct: 1213 VVVDRFTKFAHFLGLKHPFTAATVAGTFIKEIVRLHGFPASIISDRDRVFMSLFWKELFR 1272

Query: 121  LQGTQLKRSTAYHSQTDGQSEVVNKSVELIL----------------------------- 180
            LQGT+LKRSTAYH QTDGQSE VNK++E  L                             
Sbjct: 1273 LQGTKLKRSTAYHPQTDGQSENVNKALETYLRCFVNGQPRKWAGWLPWVEFWYNTSPHVS 1332

Query: 181  -----LMQSFMDDPPPIISYGHPSSTPNDSVESQLQSRDELLITLKHHLQHAQAQVKNLV 240
                     +  DPPP++  GH + TP DS++S LQ RD +L  L+ +L  AQ ++K   
Sbjct: 1333 TKMTPFKALYGRDPPPLVRTGH-NQTPVDSLDSYLQERDAVLDDLRVNLLRAQQKMKFWA 1392

Query: 241  DIHRRDVVFDIGDW-----------SLAKKRYEKLSPNFFGPYMVLGRIGEVAYLLDLPD 300
            D  RRD++ ++G +           SLA++ YEKL+  ++GPY VL RIG VAY LDLP 
Sbjct: 1393 DKRRRDILLEVGSFVYLKLQPYRQKSLARRPYEKLAARYYGPYQVLERIGAVAYRLDLPA 1452

Query: 301  NARIHLVFHMSQLKKAVGDKHHVQPNISLLNDQMELVLEPENVTELCWN--DTERDWEYL 330
             ++IH VFH+SQLK A G+ H        L   +EL++EPE + ++ +     ++  E L
Sbjct: 1453 TSKIHPVFHVSQLKPAAGNIHQPSQLPEQLTQDLELIVEPEALLDVRYGAPGHKKPLEVL 1512

BLAST of CSPI05G19350 vs. NCBI nr
Match: gi|719968486|ref|XP_010264998.1| (PREDICTED: uncharacterized protein LOC104602841 [Nelumbo nucifera])

HSP 1 Score: 323.9 bits (829), Expect = 3.4e-85
Identity = 176/374 (47.06%), Postives = 233/374 (62.30%), Query Frame = 1

Query: 1    MKSDIKIYVDQCPVCQQNKIQALSPAGLLLPLPNPNRIWEDISMDFIEGLPRSKGFDMIL 60
            +K  ++ +V  C VCQ++K +A+SP GLL PLP P +IWEDI+MDFIE LP+SKGFD I+
Sbjct: 1234 IKCFVQEFVQACDVCQRSKYEAMSPVGLLQPLPIPEQIWEDIAMDFIEALPKSKGFDTIM 1293

Query: 61   VVVDRLSKYAHFLTLGHPFSAKTVATLFIKEVVRLHGYPRSIVSDRDRMFLSHFWKEMFR 120
            VVVDRLSKYAHF+ L HPFSA TVA  F+  +VRLHG PRSIVSDRD++F+S FW+E+F 
Sbjct: 1294 VVVDRLSKYAHFIPLSHPFSALTVAQAFLHNIVRLHGIPRSIVSDRDKVFMSFFWRELFT 1353

Query: 121  LQGTQLKRSTAYHSQTDGQSEVVNKSVELIL----------------------------- 180
            LQG++L+RS+AYH Q DGQSEVVN+ +E  L                             
Sbjct: 1354 LQGSELRRSSAYHPQADGQSEVVNRCLETYLRCFAADSPSRWSSWLSWAEYSYNTSFHTA 1413

Query: 181  -----LMQSFMDDPPPIISYGHPSSTPNDSVESQLQSRDELLITLKHHLQHAQAQVKNLV 240
                     +  DPPP+I Y    ST N  VE+ L  RD +L  L+ HL  AQ ++K+  
Sbjct: 1414 AGMTPFKVVYGRDPPPLIRY-ELGSTANADVEAVLLQRDAILGELRTHLHRAQQKMKDST 1473

Query: 241  DIHRRDVVFDIGDW-----------SLAKKRYEKLSPNFFGPYMVLGRIGEVAYLLDLPD 300
            D +RRDV FD+GDW           SL+++  EKL+P F+GP+ V+ RIG VAY L LP 
Sbjct: 1474 DANRRDVNFDVGDWVYVRVRPYRQQSLSRRVDEKLAPRFYGPFAVVERIGAVAYKLQLPL 1533

Query: 301  NARIHLVFHMSQLKKAVGDKHHVQPNISLLNDQMELVLEPENVTELCWNDTE--RDWEYL 328
            +ARIHLVFH+SQLKKA+G+       +S L+   E+++EP  V  +  +        E L
Sbjct: 1534 DARIHLVFHVSQLKKAIGNHLSSPVILSTLSADTEMLVEPAVVRGVRPSTMPGVTGSEVL 1593

BLAST of CSPI05G19350 vs. NCBI nr
Match: gi|261865347|gb|ACY01928.1| (hypothetical protein [Beta vulgaris])

HSP 1 Score: 322.8 bits (826), Expect = 7.5e-85
Identity = 189/427 (44.26%), Postives = 240/427 (56.21%), Query Frame = 1

Query: 1    MKSDIKIYVDQCPVCQQNKIQALSPAGLLLPLPNPNRIWEDISMDFIEGLPRSKGFDMIL 60
            MK D+  +V  C +CQQ K   LSPAGLL PLP P  IWEDISMDF+EGLP+S+G+D IL
Sbjct: 1137 MKKDVTTFVQNCQICQQFKTSTLSPAGLLQPLPIPLAIWEDISMDFVEGLPKSQGWDTIL 1196

Query: 61   VVVDRLSKYAHFLTLGHPFSAKTVATLFIKEVVRLHGYPRSIVSDRDRMFLSHFWKEMFR 120
            VVVDRLSKYAHF+TL HPF+A TVA +FIKE+V+LHG+P +IVSDRD++F+S FWKE+F+
Sbjct: 1197 VVVDRLSKYAHFITLKHPFTAPTVAAVFIKEIVKLHGFPSTIVSDRDKVFMSLFWKELFK 1256

Query: 121  LQGTQLKRSTAYHSQTDGQSEVVNKSVELIL----------------------------- 180
            LQGT L RSTAYH Q+DGQ+EVVNKS+E  L                             
Sbjct: 1257 LQGTLLHRSTAYHPQSDGQTEVVNKSLEAYLRCFCNGRPKAWAQWISWAEYWYNTSTHSS 1316

Query: 181  -----LMQSFMDDPPPIISYGHPSSTPNDSVESQLQSRDELLITLKHHLQHAQAQVKNLV 240
                     +  D PP+  +    ST   S+E QL  RD  L  LK HL  AQ  +K   
Sbjct: 1317 SHFTPFKIVYGRDSPPLFRF-EKGSTAIFSLEEQLLDRDATLDELKFHLLEAQNSMKIQE 1376

Query: 241  DIHRRDVVFDIG-----------DWSLAKKRYEKLSPNFFGPYMVLGRIGEVAYLLDLPD 300
            D HRR V F+ G             SLAKKR EKL+P F+GP+ VL RIG+VAY L LP 
Sbjct: 1377 DKHRRAVHFEPGAMVYLKIQPYRHQSLAKKRNEKLAPRFYGPFSVLKRIGQVAYQLQLPL 1436

Query: 301  NARIHLVFHMSQLKKAVGDKHHVQPNISLLNDQMELVLEPENVTELCWNDTE--RDWEYL 351
             A++H VFH+SQLKKAVG           L + + L  +PE++  +  +  +     E L
Sbjct: 1437 GAKLHPVFHISQLKKAVGSLQSSPTIPPQLTNDLVLDAQPESLLNIRSHPQKPAEVTEVL 1496

BLAST of CSPI05G19350 vs. NCBI nr
Match: gi|387965727|gb|AFK13856.1| (Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 322.4 bits (825), Expect = 9.8e-85
Identity = 185/417 (44.36%), Postives = 240/417 (57.55%), Query Frame = 1

Query: 1    MKSDIKIYVDQCPVCQQNKIQALSPAGLLLPLPNPNRIWEDISMDFIEGLPRSKGFDMIL 60
            M+ ++  YV QC +CQQ K+    P GLL PLP P+ +WEDISMDFIEGLP SKG D IL
Sbjct: 1204 MRQEVARYVHQCLICQQQKVSQQHPRGLLQPLPIPSLVWEDISMDFIEGLPVSKGVDTIL 1263

Query: 61   VVVDRLSKYAHFLTLGHPFSAKTVATLFIKEVVRLHGYPRSIVSDRDRMFLSHFWKEMFR 120
            V+VDRLSKYAHFLTL HPF+A  VA LF+KEVVRLHG+P SIVSDRDR+FLS FWKE+FR
Sbjct: 1264 VIVDRLSKYAHFLTLRHPFTALMVADLFVKEVVRLHGFPSSIVSDRDRIFLSLFWKELFR 1323

Query: 121  LQGTQLKRSTAYHSQTDGQSEVVNKSVELIL-----------------LMQSFMDDP--- 180
            L GT LKRS+AYH QTDGQ+E+VN+++E  L                    S+   P   
Sbjct: 1324 LHGTTLKRSSAYHPQTDGQTEIVNRALETYLRCFVGGHPRSWAKWLPWAEFSYNTSPHTS 1383

Query: 181  -------------PPIISYGHPSSTPNDSVESQLQSRDELLITLKHHLQHAQAQVKNLVD 240
                         PP +       T  +S+E+ LQ RD ++  L+ +L  AQ ++K+  D
Sbjct: 1384 TKMSPFKVLYGRDPPHVVRAPKGQTSVESLEAMLQDRDAIIDDLQVNLVRAQQRMKHYAD 1443

Query: 241  IHRRDVVFDIGD-----------WSLAKKRYEKLSPNFFGPYMVLGRIGEVAYLLDLPDN 300
              R +V F +GD            SLAK+ +EKL+P F+GP+ VL RIG  AY L LP +
Sbjct: 1444 GSRTEVEFQVGDAVFLRLQPYRQRSLAKRPFEKLAPRFYGPFTVLQRIGATAYKLQLPPS 1503

Query: 301  ARIHLVFHMSQLKKAVGDKHHVQPNISLLNDQMELVLEPENVTEL--CWNDTERDWEYLV 344
            ++IH VFH+S LKK VG+   +      ++  MELV+EPE + ++       +   E L+
Sbjct: 1504 SKIHPVFHVSLLKKVVGNTPVLPTIPPHIDVDMELVVEPEELLDVRQIRQGKQTFTECLI 1563

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
YG31B_YEAST1.4e-3031.17Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
YI31B_YEAST1.2e-2930.82Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
TF28_SCHPO7.9e-2639.07Transposon Tf2-8 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
TF25_SCHPO7.9e-2639.07Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
TF24_SCHPO7.9e-2639.07Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
Match NameE-valueIdentityDescription
A5CAG1_VITVI5.4e-9048.40Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018166 PE=4 SV=1[more]
E2DMZ5_BETVU5.2e-8544.26Putative uncharacterized protein OS=Beta vulgaris PE=4 SV=1[more]
J3SDF5_BETVU6.8e-8544.36Ty3/gypsy retrotransposon protein OS=Beta vulgaris subsp. vulgaris PE=4 SV=1[more]
G9FIF5_BETVU7.6e-8448.15Putative uncharacterized protein OS=Beta vulgaris PE=4 SV=1[more]
E5GC18_CUCME9.9e-8456.72Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|147807720|emb|CAN66553.1|7.8e-9048.40hypothetical protein VITISV_018166 [Vitis vinifera][more]
gi|731338584|ref|XP_010680400.1|7.8e-9047.34PREDICTED: transposon Tf2-1 polyprotein isoform X1 [Beta vulgaris subsp. vulgari... [more]
gi|719968486|ref|XP_010264998.1|3.4e-8547.06PREDICTED: uncharacterized protein LOC104602841 [Nelumbo nucifera][more]
gi|261865347|gb|ACY01928.1|7.5e-8544.26hypothetical protein [Beta vulgaris][more]
gi|387965727|gb|AFK13856.1|9.8e-8544.36Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf
IPR016197Chromo-like_dom_sf
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G19350.1CSPI05G19350.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 41..147
score: 1.3
IPR001584Integrase, catalytic corePROFILEPS50994INTEGRASEcoord: 31..209
score: 15
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 34..211
score: 1.2
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 31..153
score: 5.46
IPR016197Chromo domain-likeunknownSSF54160Chromo domain-likecoord: 258..329
score: 4.5
NoneNo IPR availableGENE3DG3DSA:2.40.50.40coord: 307..329
score: 1.
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 1..330
score: 2.4E
NoneNo IPR availablePANTHERPTHR24559:SF186SUBFAMILY NOT NAMEDcoord: 1..330
score: 2.4E

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None