CSPI05G18950 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G18950
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Transposon Ty3-I Gag-Pol polyprotein
Location	Chr5 : 20131901 .. 20133278 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCGGCGGCACAAGAGAGATCAACGATGAACGAGAAGACTACCGAATTATCGATGCGGAGTACTATGATGAAGAGTATCAACGAAGGCGAAGGATCATCAAGTCGTGAAGGTGAACCGATGAGCGTAGAGAGAAAAACGGTTGAGGATACTAACGGCGATCGAAATAAGTTCAAGAAAGTAGAGATGCCAATCTTCAATGGAGACGATCAGTTTCGTGGCTATTTCACGCCGAAAGGTACTTTCAAATCCATAGACTGACTAATTTTGAAAAAATGACTGTAGCGACTATAAGTTTCGAAGGTCCAACTTTAAATTGGTATCGGTCCCAAGAAGAGTGGGAAAAATTTATTGATTGGGCGAATTTAAAAGAGAGAGTATTGGTTTGATTCCGATCGACGAGGGAAGGATCGTTGTATGGGCGATTTTTGCGCATACAACAGACGACGACAGTGGAGGAGTATCGAAATCTGTTTGAAAATGGGTAGCTCCTTTATCAGACCTGCCCGAGAAGGTGGTAGAAGAAACTTTCATGTCAGGATTAAAGCCATGGATCCAAGCTGAAATGGATTTCTGTGAACCTAAAGGGTTATCACAGATGATGAGGATTGCACAGAAAGTAGAAAATAGAGAGGATATTAGGAGAGAAGCAAATCTTCCTGGATATTCAGGTGGAAAATTGAACAGTTCTGAAAATAGTACCAAAGTTAATACAACTGTGAATGCTGGAAATAATAAGGGGAGCATGAACTGGTCGATGAGAACGATTACATTGAGAGGGACTTCAAATGAAGAAGCACGAAAAGAAAGACCTATGAAGAGGCTGTCTGATGCCGAGTTTCAATCACGAAGGGAGAAGGGTCTATGTTTCCGATGCAATGAGAAATATTCTCACGATCATAAGTGTAAAGCTAAGGAGTATAGGGAATTACGTATGCTGGTAGTGATGGGGGAAAATGTTGAATATGAAATCATTGAAGAAGATAATACTGAACAGGAGGAGTTGAACACGATTGAGGTTACAGGAGACGAACAAACAGTGGTAGAGTTATCGATAAATTCAGTGGTTGGGTTATCCAATCCTGGAACTATGAAGGTGAAGGGAAAGATACAAGGAAGGGAAGTCATTGTGTTGATAGATTGTGGAGCCACACACAATTTTATATCAGAAGGTTTAGTTAAAGAGCTGCAGATTAACACCAAGATTACCTCAAATTATGGGGTCATTTTGGGTTCGGGAACAACCATTAAAGGAAAAGGAATATGTGAAGCCATTGAAATATGGTTAGGAGAATGGAAGGTGGTTGATCAATTTTTGCCTTTCGAGTTAGGAGGGGTGGATGCTATTAAACCACCAATTCATCCAAAAGCTTAA

mRNA sequence

ATGGAATCGGCGGCACAAGAGAGATCAACGATGAACGAGAAGACTACCGAATTATCGATGCGGAGTACTATGATGAAGAGTATCAACGAAGGCGAAGGATCATCAAGTCGTGAAGGTGAACCGATGAGCGTAGAGAGAAAAACGGTTGAGGATACTAACGGCGATCGAAATAAGTTCAAGAAAGTAGAGATGCCAATCTTCAATGGAGACGATCAGTTTCGTGGCTATTTCACGCCGAAAGCTCCTTTATCAGACCTGCCCGAGAAGGTGGTAGAAGAAACTTTCATGTCAGGATTAAAGCCATGGATCCAAGCTGAAATGGATTTCTGTGAACCTAAAGGGTTATCACAGATGATGAGGATTGCACAGAAAGTAGAAAATAGAGAGGATATTAGGAGAGAAGCAAATCTTCCTGGATATTCAGGTGGAAAATTGAACAGTTCTGAAAATAGTACCAAAGTTAATACAACTGTGAATGCTGGAAATAATAAGGGGAGCATGAACTGGTCGATGAGAACGATTACATTGAGAGGGACTTCAAATGAAGAAGCACGAAAAGAAAGACCTATGAAGAGGCTGTCTGATGCCGAGTTTCAATCACGAAGGGAGAAGGGTCTATGTTTCCGATGCAATGAGAAATATTCTCACGATCATAAGTGTAAAGCTAAGGAGTATAGGGAATTACGTATGCTGGTAGTGATGGGGGAAAATGTTGAATATGAAATCATTGAAGAAGATAATACTGAACAGGAGGAGTTGAACACGATTGAGGTTACAGGAGACGAACAAACAGTGGTAGAGTTATCGATAAATTCAGTGGTTGGGTTATCCAATCCTGGAACTATGAAGGTGAAGGGAAAGATACAAGGAAGGGAAGTCATTGTGTTGATAGATTGTGGAGCCACACACAATTTTATATCAGAAGGTTTAGTTAAAGAGCTGCAGATTAACACCAAGATTACCTCAAATTATGGGGTCATTTTGGGTTCGGGAACAACCATTAAAGGAAAAGGAATATGTGAAGCCATTGAAATATGGTTAGGAGAATGGAAGGTGGTTGATCAATTTTTGCCTTTCGAGTTAGGAGGGGTGGATGCTATTAAACCACCAATTCATCCAAAAGCTTAA

Coding sequence (CDS)

ATGGAATCGGCGGCACAAGAGAGATCAACGATGAACGAGAAGACTACCGAATTATCGATGCGGAGTACTATGATGAAGAGTATCAACGAAGGCGAAGGATCATCAAGTCGTGAAGGTGAACCGATGAGCGTAGAGAGAAAAACGGTTGAGGATACTAACGGCGATCGAAATAAGTTCAAGAAAGTAGAGATGCCAATCTTCAATGGAGACGATCAGTTTCGTGGCTATTTCACGCCGAAAGCTCCTTTATCAGACCTGCCCGAGAAGGTGGTAGAAGAAACTTTCATGTCAGGATTAAAGCCATGGATCCAAGCTGAAATGGATTTCTGTGAACCTAAAGGGTTATCACAGATGATGAGGATTGCACAGAAAGTAGAAAATAGAGAGGATATTAGGAGAGAAGCAAATCTTCCTGGATATTCAGGTGGAAAATTGAACAGTTCTGAAAATAGTACCAAAGTTAATACAACTGTGAATGCTGGAAATAATAAGGGGAGCATGAACTGGTCGATGAGAACGATTACATTGAGAGGGACTTCAAATGAAGAAGCACGAAAAGAAAGACCTATGAAGAGGCTGTCTGATGCCGAGTTTCAATCACGAAGGGAGAAGGGTCTATGTTTCCGATGCAATGAGAAATATTCTCACGATCATAAGTGTAAAGCTAAGGAGTATAGGGAATTACGTATGCTGGTAGTGATGGGGGAAAATGTTGAATATGAAATCATTGAAGAAGATAATACTGAACAGGAGGAGTTGAACACGATTGAGGTTACAGGAGACGAACAAACAGTGGTAGAGTTATCGATAAATTCAGTGGTTGGGTTATCCAATCCTGGAACTATGAAGGTGAAGGGAAAGATACAAGGAAGGGAAGTCATTGTGTTGATAGATTGTGGAGCCACACACAATTTTATATCAGAAGGTTTAGTTAAAGAGCTGCAGATTAACACCAAGATTACCTCAAATTATGGGGTCATTTTGGGTTCGGGAACAACCATTAAAGGAAAAGGAATATGTGAAGCCATTGAAATATGGTTAGGAGAATGGAAGGTGGTTGATCAATTTTTGCCTTTCGAGTTAGGAGGGGTGGATGCTATTAAACCACCAATTCATCCAAAAGCTTAA

Homology

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BLAST of CSPI05G18950 vs. TrEMBL
Match: A5B2I6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043911 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 5.3e-51
Identity = 126/289 (43.60%), Postives = 181/289 (62.63%), Query Frame = 1


Query: 80   KAPLSDLPEKVVEETFMSGLKPWIQAEMDFCEPKGLSQMMRIAQKVENREDIRREANLPG 139
            + PL  + E+V+E TFM+GL P I+AE    +P GL  +M +AQ+VE+R    R A  P 
Sbjct: 875  ETPLKGISEEVMESTFMNGLLPEIRAEQRLLQPYGLGHLMEMAQRVEDRNLAMRAAREP- 934

Query: 140  YSGGKLNSSENSTKVNTTVNAGNNKGSMNWSMRTITLRGTSNEEARKERPMKRLSDAEFQ 199
                   +   STK+ +T N G  K   N+  R + + G      R+E P+KRL+++E Q
Sbjct: 935  -------NGPKSTKMLSTANRGEWKIGENFQTRAVAV-GEKTMSQRREIPIKRLTESELQ 994

Query: 200  SRREKGLCFRCNEKYSHDHKCKAKEYRELRMLVVMGENVEYEIIEEDNTEQEELNTIEVT 259
            +RREKGL F+C EK+S  H+CK    +ELR+L+V      +E  EED+ + ++  T E  
Sbjct: 995  ARREKGLWFKCEEKFSPGHRCK----KELRVLLV------HEDEEEDDNQFDDRATEEPA 1054

Query: 260  GDE-QTVVELSINSVVGLSNPGTMKVKGKIQGREVIVLIDCGATHNFISEGLVKELQINT 319
              E +  VELS+NSVVGL+ PGTMK+KG I  +EVI+L+D GATHNF+S  LV++L +  
Sbjct: 1055 LIELKDAVELSLNSVVGLTTPGTMKIKGTIGSKEVIILVDSGATHNFLSLELVQQLTLPL 1114

Query: 320  KITSNYGVILGSGTTIKGKGICEAIEIWLGEWKVVDQFLPFELGGVDAI 368
              T++YGV++G+G ++KGKGIC  + I +    VV+ FLP ELG  D I
Sbjct: 1115 TTTTSYGVMMGTGISVKGKGICRGVCISMQGLTVVEDFLPLELGNTDVI 1144

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BLAST of CSPI05G18950 vs. TrEMBL
Match: E5GC18_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.7e-44
Identity = 119/298 (39.93%), Postives = 180/298 (60.40%), Query Frame = 1


Query: 81  APLSDLPEKVVEETFMSGLKPWIQAEMDFCEPKGLSQMMRIAQKVENREDIRREANLPGY 140
           APL ++ E+V+E TF +GL P I+ E+      GL  +M  AQ  E + ++ +    P Y
Sbjct: 174 APLPEMAEEVLEGTFTNGLDPRIRKEVFAMRVVGLEDLMEAAQLAEEKAEVTKGGPYP-Y 233

Query: 141 SGGK------LNSSENS-----TKVNTTVNAGNNKGSMNWSMRTITLRGTSNEEARKERP 200
              K      L SS  +     TK+ T      N+ S + + ++ T+ G      R+E  
Sbjct: 234 PYSKEAAKTNLGSSPKTFGSPPTKMVTLAKKVVNQTSNSNTSQSHTVGGGG----RREPS 293

Query: 201 MKRLSDAEFQSRREKGLCFRCNEKYSHDHKCKAKEYRELRMLVVMGENVEYEIIEEDNTE 260
            +R  D++ Q+R+EKGLC+RC++ +S  H+CK    REL++ VV  + ++ E+ EEDN  
Sbjct: 294 YRRWIDSKLQARKEKGLCYRCDKPFSKGHRCKN---RELKLCVVADDLIDTEMSEEDN-- 353

Query: 261 QEELNTIEVTGDEQTVVELSINSVVGLSNPGTMKVKGKIQGREVIVLIDCGATHNFISEG 320
             +   +E+      +VELS++SVVGL+ PGT K+KGK++ REV+V+IDCGATHNFIS  
Sbjct: 354 --DGGMVEIG----PIVELSLSSVVGLTAPGTSKIKGKVEDREVVVMIDCGATHNFISLR 413

Query: 321 LVKELQINTKITSNYGVILGSGTTIKGKGICEAIEIWLGEWKVVDQFLPFELGGVDAI 368
           LV+E+QI T  T+ YGVI+GSG  ++GKG+C  + + L    VV+ FLP ELG +D +
Sbjct: 414 LVEEMQIATTETTQYGVIMGSGKAVQGKGMCTGVVVGLPGLTVVEDFLPLELGHLDMV 455

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BLAST of CSPI05G18950 vs. TrEMBL
Match: A0A087GW89_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA5G106200 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.1e-40
Identity = 116/310 (37.42%), Postives = 166/310 (53.55%), Query Frame = 1


Query: 71  DQFRGYFTPKAPLSDLPEKVVEETFMSGLKPWIQAEMDFCEPKGLSQMMRIAQKVENRED 130
           D  R +    A   DL E  +E  FM G KP I+A M   +P  L +MM +A+ V + + 
Sbjct: 221 DYCRDFIFLAAQALDLQESALELAFMIGRKPTIRARMKSFDPHHLEKMMSVAKTVADWDL 280

Query: 131 IRREANLPGYSGGKLNSSENSTKVNTT---------VNAGNNKGSMNWSMRTITLRG--- 190
              E  +  + GG+  S  N  K                 N K +   S  T +  G   
Sbjct: 281 TEEEGPVSNHRGGERGSRGNQIKSGGPNQYSGQKHGTRPQNKKPNNGSSTTTTSFCGGDT 340

Query: 191 -TSNEEARKERPMKRLSDAEFQSRREKGLCFRCNEKYSHDHKCKAKEYRELRMLVVMGEN 250
              N   R + P +RL+ AE    R +GLCFRC+EK+   H+C     REL +++V  E 
Sbjct: 341 KNPNNHNRVKPPFRRLTQAEMAQGRAEGLCFRCDEKWYERHRCPR---RELSVVIVQEEG 400

Query: 251 VEYEIIEEDNTEQEELNTIEVTGDEQTVVELSINSVVGLSNPGTMKVKGKIQGREVIVLI 310
            + E +EED T+ +E     VT  E     LS+NS+VG+S+P TMK+K K+ G EV+V+I
Sbjct: 401 PDKEWVEEDETDSDEEG---VTVAEMAT--LSLNSLVGISSPRTMKLKAKMLGTEVVVMI 460

Query: 311 DCGATHNFISEGLVKELQINTKITSNYGVILGSGTTIKGKGICEAIEIWLGEWKVVDQFL 368
           D GA+HNFISE LVK+L + T+ +  YGV++G+ T + G+GIC  + + + +  VV  FL
Sbjct: 461 DSGASHNFISEPLVKKLSMKTEESHCYGVMMGTRTEVVGRGICREVNLVMQDITVVTDFL 520

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BLAST of CSPI05G18950 vs. TrEMBL
Match: A0A087FZI0_ARAAL (Uncharacterized protein (Fragment) OS=Arabis alpina GN=AALP_AAs71112U000100 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.6e-39
Identity = 114/301 (37.87%), Postives = 173/301 (57.48%), Query Frame = 1


Query: 85  DLPEKVVEETFMSGLKPWIQAEMDFCEPKGLSQMMRIAQKVENREDIRREANLP-GYSGG 144
           ++PE V+E TFM+GL+P I+   +   P+ L+ MM  A+KV +  D   EA  P GYSGG
Sbjct: 40  EVPEFVLEWTFMNGLRPEIRTRTETFAPRTLAMMMSTAKKVASWTD--SEAPPPRGYSGG 99

Query: 145 KLNSSENSTKVNTTVNAG-NNKGSMNWSMRTITLRGTS---------------NEEARKE 204
               S    KV +T + G  N+G      + IT  G +               N + R +
Sbjct: 100 ----SNRGNKVGSTKHQGPTNQGGFRPQNKPITTFGPAKTTNANAPRFEDRNPNRQNRVK 159

Query: 205 RPMKRLSDAEFQSRREKGLCFRCNEKYSHDHKCKAKEYRELRMLVVMGENVEYEIIEED- 264
            P +RL+ AE + R+ +G+CF C+EK     +C    Y+E ++L+V  +  E E+ E D 
Sbjct: 160 PPFRRLTQAEVEWRKAEGMCFCCDEKGHSRPQC---PYKEFQLLIVQEDGHEVEMEESDE 219

Query: 265 NTEQEELNTIEVTGDEQTVVELSINSVVGLSNPGTMKVKGKIQGREVIVLIDCGATHNFI 324
           ++++E + TI        V  LS+NS+VG+S+P  +K+ G IQG  V++LID G THNFI
Sbjct: 220 DSDEEAIQTI------AGVATLSLNSMVGISSPRIVKMGGTIQGEPVVILIDSGETHNFI 279

Query: 325 SEGLVKELQINTKITSNYGVILGSGTTIKGKGICEAIEIWLGEWKVVDQFLPFELGGVDA 368
           SE +V +L +  + T  YGV++G+G T++G+GIC+ +E+ +    VV QFLP ELG  D 
Sbjct: 280 SEKIVTQLGLRVEGTKGYGVVMGTGLTVQGQGICKEVELSVQGLSVVAQFLPLELGSADV 325

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BLAST of CSPI05G18950 vs. TrEMBL
Match: A0A087GAS3_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G317800 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.3e-38
Identity = 109/294 (37.07%), Postives = 167/294 (56.80%), Query Frame = 1


Query: 85  DLPEKVVEETFMSGLKPWIQAEMDFCEPKGLSQMMRIAQKV----ENREDIRREANLPGY 144
           ++PE V+E TFM+GL+P I+   +   P+ L+ MM  A+KV    ++    +R     G+
Sbjct: 191 EVPEFVLEWTFMNGLRPEIRTRAETFAPRTLATMMSTAKKVASWIDSEASPQRGYGGGGH 250

Query: 145 SGGKLNSSENSTKVNTTVNAGNNKGSMNWSMRTITLRGTS-------NEEARKERPMKRL 204
            G K+   +     + +     N+    +     T   T        N + R + P +RL
Sbjct: 251 KGNKVGPIKPQGPSHQSGFKPQNRPITTFGPAKATNINTQRSEDRNPNRQNRVKPPFRRL 310

Query: 205 SDAEFQSRREKGLCFRCNEKYSHDHKCKAKEYRELRMLVVMGENVEYEIIEEDNTEQEEL 264
           + AE   R+ +GLCFRC+EK     +C    Y+E ++L+V  +  E E+ EE + E +E 
Sbjct: 311 TQAEVDWRKAEGLCFRCDEKGHSRPQCP---YKEFQLLIVQKDGSELEL-EEADEESDEE 370

Query: 265 NTIEVTGDEQTVVELSINSVVGLSNPGTMKVKGKIQGREVIVLIDCGATHNFISEGLVKE 324
              E+ G    +  LS+NS+VG+S+P T+K++G IQG  V+VLID GATHNFISE +V  
Sbjct: 371 TIQEIAG----MATLSLNSMVGISSPRTVKIRGVIQGEHVVVLIDSGATHNFISEKIVTL 430

Query: 325 LQINTKITSNYGVILGSGTTIKGKGICEAIEIWLGEWKVVDQFLPFELGGVDAI 368
           L++ T+ T  YGV+ G+G T++G+GIC+A+E+ L    VV  FLP ELG  D I
Sbjct: 431 LRLRTEETKGYGVVTGTGLTVQGQGICKAVELSLQGLLVVAHFLPLELGSADVI 476

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BLAST of CSPI05G18950 vs. TAIR10
Match: AT3G29750.1 (AT3G29750.1 Eukaryotic aspartyl protease family protein)

HSP 1 Score: 62.0 bits (149), Expect = 9.0e-10
Identity = 42/120 (35.00%), Postives = 59/120 (49.17%), Query Frame = 1


Query: 249 EQEELNTIEVT---GDEQTVVELSINSVVGLSNPGTMKVKGKIQGREVIVLIDCGATHNF 308
           E EEL     T   G EQ V++L+ N          M+  G I   +V+V ID GAT NF
Sbjct: 96  ELEELEQDSYTLRQGMEQLVIDLTRNK--------GMRFYGFILDHKVVVAIDSGATDNF 155

Query: 309 ISEGLVKELQINTKITSNYGVILGSGTTIKGKGICEAIEIWLGEWKVVDQFLPFELGGVD 366
           I   L   L++ T IT+   V+LG    I+  G C  I +W+ E ++ + FL  +L   D
Sbjct: 156 ILVELAFSLKLPTSITNQASVLLGQRQCIQSVGTCLGIRLWVQEVEITENFLLLDLAKTD 207

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BLAST of CSPI05G18950 vs. TAIR10
Match: AT3G30770.1 (AT3G30770.1 Eukaryotic aspartyl protease family protein)

HSP 1 Score: 57.0 bits (136), Expect = 2.9e-08
Identity = 33/105 (31.43%), Postives = 55/105 (52.38%), Query Frame = 1


Query: 261 DEQTVVELSINSVVGLSNPGTMKVKGKIQGREVIVLIDCGATHNFISEGLVKELQINTKI 320
           D +T+ ++   S    +    M+  G I   +V+V+ID GAT+NFIS+ L   L++ T  
Sbjct: 263 DFKTIRQVKRQSTTEFTKGKDMRFYGFISCHKVVVVIDSGATNNFISDELALVLKLPTST 322

Query: 321 TSNYGVILGSGTTIKGKGICEAIEIWLGEWKVVDQFLPFELGGVD 366
           T+   V+LG    I+  G C  I + + E ++ + FL  +L   D
Sbjct: 323 TNQASVLLGQRQCIQTIGTCFGINLLVQEVEINENFLLLDLTKTD 367

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BLAST of CSPI05G18950 vs. NCBI nr
Match: gi|659119521|ref|XP_008459701.1| (PREDICTED: uncharacterized protein LOC103498741 [Cucumis melo])

HSP 1 Score: 337.8 bits (865), Expect = 2.4e-89
Identity = 174/288 (60.42%), Postives = 222/288 (77.08%), Query Frame = 1


Query: 81  APLSDLPEKVVEETFMSGLKPWIQAEMDFCEPKGLSQMMRIAQKVENREDIRREANLPGY 140
           AP++DLPE+V+E+TFM+GL PW+++E+ F  PKGL++MM +AQ VENRE +R EA L GY
Sbjct: 230 APVNDLPERVIEDTFMNGLLPWVRSEVVFYRPKGLAEMMEVAQMVENREIVRTEAKLNGY 289

Query: 141 SGGKLNSSENSTKVNTTVN-AGNNKGSMNWSMRTITLRGTSNEEARKERPMKRLSDAEFQ 200
           SGG++     S +  T+   AG +K + ++ +RTITLR ++  E R+E   KRL DAEFQ
Sbjct: 290 SGGRMTGQIGSNRKATSGGVAGESKSNTSFPIRTITLRSSAPTENRREGTYKRLPDAEFQ 349

Query: 201 SRREKGLCFRCNEKYSHDHKCKAKEYRELRMLVVMGENVEYEIIEEDNTEQEELNTIEVT 260
           +R+EKGLCFRCNEKYS DHKC+ KE RELRM VV     EYEI+EE+  E++EL  IEV 
Sbjct: 350 ARKEKGLCFRCNEKYSADHKCRLKEQRELRMFVVTEGREEYEIVEEEK-EEKELGRIEVN 409

Query: 261 GDEQTVVELSINSVVGLSNPGTMKVKGKIQGREVIVLIDCGATHNFISEGLVKELQINTK 320
            D  TVVELSINSVVGL++PGTMKV+GK+ G EVI+LIDCGATHNF+SE LVK+L +  K
Sbjct: 410 EDITTVVELSINSVVGLNDPGTMKVRGKLLGEEVIILIDCGATHNFVSEKLVKKLILPIK 469

Query: 321 ITSNYGVILGSGTTIKGKGICEAIEIWLGEWKVVDQFLPFELGGVDAI 368
            TS+YGVILGSG  ++GKGICE +E+ L  WK+V+ FLP ELGGVD I
Sbjct: 470 ETSHYGVILGSGAAVQGKGICEKLEVQLNGWKIVEDFLPIELGGVDVI 516

[Close]

BLAST of CSPI05G18950 vs. NCBI nr
Match: gi|659109397|ref|XP_008454696.1| (PREDICTED: uncharacterized protein LOC103495051 [Cucumis melo])

HSP 1 Score: 286.6 bits (732), Expect = 6.4e-74
Identity = 152/252 (60.32%), Postives = 195/252 (77.38%), Query Frame = 1


Query: 81  APLSDLPEKVVEETFMSGLKPWIQAEMDFCEPKGLSQMMRIAQKVENREDIRREANLPGY 140
           AP++DLPE+V+ +TFM+GL PW+++E+ FC PK L++MM  AQ VENRE  R EA + GY
Sbjct: 230 APVNDLPERVILDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQMVENREIARIEAKMSGY 289

Query: 141 SGGKLNSSEN-STKVNTTVNAGNNKGSMNWSMRTITLRGTSNEEARKERPMKRLSDAEFQ 200
           SGGK+ +  N + K +T   AG+NK +  + +RTITLR +   E ++E   KRL DAEFQ
Sbjct: 290 SGGKITAYNNVAGKTSTGGVAGDNKNNTVFPIRTITLRSSVPNENQREGTYKRLPDAEFQ 349

Query: 201 SRREKGLCFRCNEKYSHDHKCKAKEYRELRMLVVMGENVEYEIIEEDNTEQEELNTIEVT 260
           +R+EKGLCFRCNEKYS DHKC+ +E RELRM VV  E  EYEI+EE+N E+ EL+ IE+ 
Sbjct: 350 ARKEKGLCFRCNEKYSADHKCRLREQRELRMFVVTAERDEYEIVEEEN-ERRELSCIELK 409

Query: 261 GDEQTVVELSINSVVGLSNPGTMKVKGKIQGREVIVLIDCGATHNFISEGLVKELQINTK 320
            D  TVVELSINSVVGL++PGTMKV+GK+ G EV++LIDCGATHNF+SE LVK+L +  K
Sbjct: 410 EDVTTVVELSINSVVGLNDPGTMKVRGKLFGEEVVILIDCGATHNFVSEKLVKKLSLPIK 469

Query: 321 ITSNYGVILGSG 332
            TS+YGVILGSG
Sbjct: 470 ETSHYGVILGSG 480

[Close]

BLAST of CSPI05G18950 vs. NCBI nr
Match: gi|659134102|ref|XP_008467029.1| (PREDICTED: uncharacterized protein LOC103504456, partial [Cucumis melo])

HSP 1 Score: 219.2 bits (557), Expect = 1.3e-53
Identity = 126/222 (56.76%), Postives = 156/222 (70.27%), Query Frame = 1


Query: 71  DQFRGYFTPK-APLSDLPEKVVEETFMSGLKPWIQAEMDFCEPKGLSQMMRIAQKVENRE 130
           +++R  F    APLSD+ ++VVEETFMSGL PWI+AE+  C PKGL++MMR AQ VE+RE
Sbjct: 212 EEYRNLFDKLVAPLSDVEDRVVEETFMSGLFPWIRAEVILCRPKGLAEMMRTAQLVEDRE 271

Query: 131 DIRREANLPGYSGGKLNSSENSTKVNTTVNAGN--NKGSMNWSMRTITLRGTSNEEARKE 190
            +R  ANL GY GGK +S+  ST      +  N  NK +  + +RTITL+  ++ E RKE
Sbjct: 272 VLRNAANLNGYIGGK-SSTPTSTGTKHYYHQQNKENKANAPFPIRTITLKSPNSGETRKE 331

Query: 191 RPMKRLSDAEFQSRREKGLCFRCNEKYSHDHKCKAKEYRELRMLVVMGENVEYEIIEEDN 250
              KRL DAEFQ RREKGLCF+CNEKYS DHKCK +E RELRM VV   N E EI+EE  
Sbjct: 332 GTSKRLPDAEFQLRREKGLCFKCNEKYSADHKCKMREQRELRMFVVKDNNEELEIVEETE 391

Query: 251 TEQEELNTIEVTGDEQTVVELSINSVVGLSNPGTMKVKGKIQ 290
           T+  EL T+EV       VELSINSVVGL++PGTMKV+G +Q
Sbjct: 392 TDTAELRTVEVRPQATACVELSINSVVGLNDPGTMKVRGTLQ 432

[Close]

BLAST of CSPI05G18950 vs. NCBI nr
Match: gi|147854459|emb|CAN78588.1| (hypothetical protein VITISV_043911 [Vitis vinifera])

HSP 1 Score: 209.9 bits (533), Expect = 7.6e-51
Identity = 126/289 (43.60%), Postives = 181/289 (62.63%), Query Frame = 1


Query: 80   KAPLSDLPEKVVEETFMSGLKPWIQAEMDFCEPKGLSQMMRIAQKVENREDIRREANLPG 139
            + PL  + E+V+E TFM+GL P I+AE    +P GL  +M +AQ+VE+R    R A  P 
Sbjct: 875  ETPLKGISEEVMESTFMNGLLPEIRAEQRLLQPYGLGHLMEMAQRVEDRNLAMRAAREP- 934

Query: 140  YSGGKLNSSENSTKVNTTVNAGNNKGSMNWSMRTITLRGTSNEEARKERPMKRLSDAEFQ 199
                   +   STK+ +T N G  K   N+  R + + G      R+E P+KRL+++E Q
Sbjct: 935  -------NGPKSTKMLSTANRGEWKIGENFQTRAVAV-GEKTMSQRREIPIKRLTESELQ 994

Query: 200  SRREKGLCFRCNEKYSHDHKCKAKEYRELRMLVVMGENVEYEIIEEDNTEQEELNTIEVT 259
            +RREKGL F+C EK+S  H+CK    +ELR+L+V      +E  EED+ + ++  T E  
Sbjct: 995  ARREKGLWFKCEEKFSPGHRCK----KELRVLLV------HEDEEEDDNQFDDRATEEPA 1054

Query: 260  GDE-QTVVELSINSVVGLSNPGTMKVKGKIQGREVIVLIDCGATHNFISEGLVKELQINT 319
              E +  VELS+NSVVGL+ PGTMK+KG I  +EVI+L+D GATHNF+S  LV++L +  
Sbjct: 1055 LIELKDAVELSLNSVVGLTTPGTMKIKGTIGSKEVIILVDSGATHNFLSLELVQQLTLPL 1114

Query: 320  KITSNYGVILGSGTTIKGKGICEAIEIWLGEWKVVDQFLPFELGGVDAI 368
              T++YGV++G+G ++KGKGIC  + I +    VV+ FLP ELG  D I
Sbjct: 1115 TTTTSYGVMMGTGISVKGKGICRGVCISMQGLTVVEDFLPLELGNTDVI 1144

[Close]

BLAST of CSPI05G18950 vs. NCBI nr
Match: gi|307136175|gb|ADN34016.1| (ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 188.3 bits (477), Expect = 2.4e-44
Identity = 119/298 (39.93%), Postives = 180/298 (60.40%), Query Frame = 1


Query: 81  APLSDLPEKVVEETFMSGLKPWIQAEMDFCEPKGLSQMMRIAQKVENREDIRREANLPGY 140
           APL ++ E+V+E TF +GL P I+ E+      GL  +M  AQ  E + ++ +    P Y
Sbjct: 174 APLPEMAEEVLEGTFTNGLDPRIRKEVFAMRVVGLEDLMEAAQLAEEKAEVTKGGPYP-Y 233

Query: 141 SGGK------LNSSENS-----TKVNTTVNAGNNKGSMNWSMRTITLRGTSNEEARKERP 200
              K      L SS  +     TK+ T      N+ S + + ++ T+ G      R+E  
Sbjct: 234 PYSKEAAKTNLGSSPKTFGSPPTKMVTLAKKVVNQTSNSNTSQSHTVGGGG----RREPS 293

Query: 201 MKRLSDAEFQSRREKGLCFRCNEKYSHDHKCKAKEYRELRMLVVMGENVEYEIIEEDNTE 260
            +R  D++ Q+R+EKGLC+RC++ +S  H+CK    REL++ VV  + ++ E+ EEDN  
Sbjct: 294 YRRWIDSKLQARKEKGLCYRCDKPFSKGHRCKN---RELKLCVVADDLIDTEMSEEDN-- 353

Query: 261 QEELNTIEVTGDEQTVVELSINSVVGLSNPGTMKVKGKIQGREVIVLIDCGATHNFISEG 320
             +   +E+      +VELS++SVVGL+ PGT K+KGK++ REV+V+IDCGATHNFIS  
Sbjct: 354 --DGGMVEIG----PIVELSLSSVVGLTAPGTSKIKGKVEDREVVVMIDCGATHNFISLR 413

Query: 321 LVKELQINTKITSNYGVILGSGTTIKGKGICEAIEIWLGEWKVVDQFLPFELGGVDAI 368
           LV+E+QI T  T+ YGVI+GSG  ++GKG+C  + + L    VV+ FLP ELG +D +
Sbjct: 414 LVEEMQIATTETTQYGVIMGSGKAVQGKGMCTGVVVGLPGLTVVEDFLPLELGHLDMV 455

The following BLAST results are available for this feature:

BLAST of CSPI05G18950 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI05G18950 vs. TrEMBL


Match Name	E-value	Identity	Description
A5B2I6_VITVI	5.3e-51	43.60	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043911 PE=4 SV=1	[more]
E5GC18_CUCME	1.7e-44	39.93	Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A087GW89_ARAAL	1.1e-40	37.42	Uncharacterized protein OS=Arabis alpina GN=AALP_AA5G106200 PE=4 SV=1	[more]
A0A087FZI0_ARAAL	1.6e-39	37.87	Uncharacterized protein (Fragment) OS=Arabis alpina GN=AALP_AAs71112U000100 PE=4...	[more]
A0A087GAS3_ARAAL	2.3e-38	37.07	Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G317800 PE=4 SV=1	[more]

BLAST of CSPI05G18950 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G29750.1	9.0e-10	35.00	Eukaryotic aspartyl protease family protein	[more]
AT3G30770.1	2.9e-08	31.43	Eukaryotic aspartyl protease family protein	[more]

BLAST of CSPI05G18950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119521\|ref\|XP_008459701.1\|	2.4e-89	60.42	PREDICTED: uncharacterized protein LOC103498741 [Cucumis melo]	[more]
gi\|659109397\|ref\|XP_008454696.1\|	6.4e-74	60.32	PREDICTED: uncharacterized protein LOC103495051 [Cucumis melo]	[more]
gi\|659134102\|ref\|XP_008467029.1\|	1.3e-53	56.76	PREDICTED: uncharacterized protein LOC103504456, partial [Cucumis melo]	[more]
gi\|147854459\|emb\|CAN78588.1\|	7.6e-51	43.60	hypothetical protein VITISV_043911 [Vitis vinifera]	[more]
gi\|307136175\|gb\|ADN34016.1\|	2.4e-44	39.93	ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021109	Peptidase_aspartic_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G18950.1	CSPI05G18950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021109	Aspartic peptidase domain	unknown	SSF50630	Acid proteases	coord: 276..357 score: 1.9
None	No IPR available	PFAM	PF13975	gag-asp_proteas	coord: 284..345 score: 3.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI05G18950	CsaV3_5G028250	Cucumber (Chinese Long) v3	cpicucB294
CSPI05G18950	Bhi12G000867	Wax gourd	cpiwgoB453

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI05G18950	Cucumber (Chinese Long) v2	cpicuB239
CSPI05G18950	Melon (DHL92) v3.5.1	cpimeB374
CSPI05G18950	Bottle gourd (USVL1VR-Ls)	cpilsiB339
CSPI05G18950	Melon (DHL92) v3.6.1	cpimedB366
CSPI05G18950	Cucumber (Gy14) v2	cgybcpiB225
CSPI05G18950	Cucumber (Chinese Long) v3	cpicucB284
CSPI05G18950	Cucumber (Gy14) v1	cgycpiB296