CSPI05G18650 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G18650
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionSquamous cell carcinoma antigen recognized by T-cells 3
LocationChr5 : 19739922 .. 19741588 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTAAAAATAAATTTCCATAAAAATGAAATCGTAGTCCTCGGCAGTGTTCAGTTGTAGTCCTCGGCAGGAGCAGACTGTTTTCTTGGGGAACTTTCTCTTTGAAGTCCGACGCCATGGATGAACCCATTTCATCCAAAGCCGAAACTCCACTTCCAACTAACTCAGACCAAGGATACTCGGTAAATGGAGACGAACCCATGCCCGACCTTCCTCAGAACCCCGCCGATTCTTCTTCCTCCGACTCTGATTCTGAAGACGACGAATCCAACCAAAACCTTCACCTCCAGTCCCTTCAATCTCAGCTCTCCTCCAATCCCTCCGACTACGATGCTCACGTTCAAGTAATTTTCCTCTTCTTTCTTTAATGCCTTTCTTCCCCATCATTTCTTCACCCATTTCTGCACTTCTAACTTCTAATTTGATTTTGACGCCCTTTCCTGGTTCTTCTACTCTGTCTTTACCATTCCCACTACTTCAGTACATAAAGATTTTGAGGAAAGTTGGTGACATCGACAACCTCAGGAAAGCAAGGGAAGCAATGAGTGAGATATTTCCATTGACCCCTTCAATGTGGCAGGAATGGGCCGAGGACGAAGCATCTATTAGCACTGGGTAATCTCGTCCATTTGTTTCCTCTCTTGGCTGTTATACTGTTGCTCCCTAAATTCATTTCTGTTGTGCCATTCTTAGCATCTTCTGGGTTGGATTTGTTCCTAAGAGAACTGTTAATTTCGAAGTACTAACAAGCTCTTGAAATTTTATAAAAAAGAAAAGTGGATATTGGATTTCTCTTAATCCTTCTCTTGTTGGCAGTTGGCTATTTAACACTGGTTAATTCTGCTCTCAATGCTTTTGCAGACCCGAGGCTCTTGCTGCAATTGAGAGACTATATGAGCGAGGGGTGTTTGATTATCTGGTTTGTATTGTCGTGTCATTTGGAGATTAGCCCTTGGTTTTACGAGGCATGTTACATGTTAGACTGAAGAATGTTAGCATATTACCAATTTTACTTTTGCTGCAAGCATCAATAGTTTCTCCACATATGTCCTTTTATTCTTGAACGTAATGTGAGTTTTGAGACCTCATAGTATAAATCCATAAACTTCATCTATTGTCGAATTTAACCAATTGGATCTTGGGCTTTTACGTCCAAACATTTGTTGTTTTCTTATTTAATTTTATTTTTATTTTCAACAGCTAATTAGTTTCTTTGGGAATAAATATGGTTGTCTTTGAAATTCAGTTTTCTGCCCGAGTTTCTACTTCTAATGCATATAAGGAATCCTTTTAGAGGACAATGGTTTGCTTTGTAATTATGGCTGTTTTATTGAGAATAACGATATTTTGAACTTTGAAGTTGTAGAGGGTGTCATGATGTTTTCATTTTTTGTCTTGTTGATCATGATTACATGAGATGGTTAACTTTTCACTATGTTATGCAGTCAGTTTCTCTTTGGCTTGACTACTTAAATTTCATTCGAGAATATGATCCATTGGTGCAAGATTGTGCAACTTCTGGAATTAAAAAGGTTAGAGATTTATTTGAACGTGCTCTCACAGCCGCTGGTTTGCATTTCACTGAGGCTGAAAAATTATGGGAAGCATATAGAGATTTGGAGAAATCCATATATCAAACCATTGCTGAAACTGATGCTCAGGTTTAA

mRNA sequence

ATGGATGAACCCATTTCATCCAAAGCCGAAACTCCACTTCCAACTAACTCAGACCAAGGATACTCGGTAAATGGAGACGAACCCATGCCCGACCTTCCTCAGAACCCCGCCGATTCTTCTTCCTCCGACTCTGATTCTGAAGACGACGAATCCAACCAAAACCTTCACCTCCAGTCCCTTCAATCTCAGCTCTCCTCCAATCCCTCCGACTACGATGCTCACGTTCAATACATAAAGATTTTGAGGAAAGTTGGTGACATCGACAACCTCAGGAAAGCAAGGGAAGCAATGAGTGAGATATTTCCATTGACCCCTTCAATGTGGCAGGAATGGGCCGAGGACGAAGCATCTATTAGCACTGGACCCGAGGCTCTTGCTGCAATTGAGAGACTATATGAGCGAGGGGTGTTTGATTATCTGTCAGTTTCTCTTTGGCTTGACTACTTAAATTTCATTCGAGAATATGATCCATTGGTGCAAGATTGTGCAACTTCTGGAATTAAAAAGGTTAGAGATTTATTTGAACGTGCTCTCACAGCCGCTGGTTTGCATTTCACTGAGGCTGAAAAATTATGGGAAGCATATAGAGATTTGGAGAAATCCATATATCAAACCATTGCTGAAACTGATGCTCAGGTTTAA

Coding sequence (CDS)

ATGGATGAACCCATTTCATCCAAAGCCGAAACTCCACTTCCAACTAACTCAGACCAAGGATACTCGGTAAATGGAGACGAACCCATGCCCGACCTTCCTCAGAACCCCGCCGATTCTTCTTCCTCCGACTCTGATTCTGAAGACGACGAATCCAACCAAAACCTTCACCTCCAGTCCCTTCAATCTCAGCTCTCCTCCAATCCCTCCGACTACGATGCTCACGTTCAATACATAAAGATTTTGAGGAAAGTTGGTGACATCGACAACCTCAGGAAAGCAAGGGAAGCAATGAGTGAGATATTTCCATTGACCCCTTCAATGTGGCAGGAATGGGCCGAGGACGAAGCATCTATTAGCACTGGACCCGAGGCTCTTGCTGCAATTGAGAGACTATATGAGCGAGGGGTGTTTGATTATCTGTCAGTTTCTCTTTGGCTTGACTACTTAAATTTCATTCGAGAATATGATCCATTGGTGCAAGATTGTGCAACTTCTGGAATTAAAAAGGTTAGAGATTTATTTGAACGTGCTCTCACAGCCGCTGGTTTGCATTTCACTGAGGCTGAAAAATTATGGGAAGCATATAGAGATTTGGAGAAATCCATATATCAAACCATTGCTGAAACTGATGCTCAGGTTTAA
Homology
[Close]
BLAST of CSPI05G18650 vs. Swiss-Prot
Match: SART3_DANRE (Squamous cell carcinoma antigen recognized by T-cells 3 OS=Danio rerio GN=sart3 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.1e-30
Identity = 67/164 (40.85%), Postives = 98/164 (59.76%), Query Frame = 1 

Query: 43  DSDSEDDESNQNLHLQSLQSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFP 102
           + D+ +DE      +Q L+ QLS N  DY+ HV  IK+LR+ G +  LRKAR+ MSE+FP
Sbjct: 46  EEDTSEDERENEAEIQRLEEQLSINAFDYNCHVDLIKLLRQEGKLHRLRKARQKMSELFP 105

Query: 103 LTPSMWQEWAEDEASISTGPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDC 162
           LT  +W +W +DE  I+        +  L+ER + DY+   +WL+Y+ +      +    
Sbjct: 106 LTEEIWLDWLKDEIRITEDESDREKVYELFERAIKDYVCPEIWLEYVQY-----SIGGMG 165

Query: 163 ATSGIKKVRDLFERALTAAGLHFTEAEKLWEAYRDLEKSIYQTI 207
           A  GI++VR +FERALTA GLH T+   +WEAYR+ E  I  T+
Sbjct: 166 AQGGIERVRSIFERALTAVGLHMTKGASIWEAYREFEIVILSTV 204

[Close]
BLAST of CSPI05G18650 vs. Swiss-Prot
Match: SART3_MOUSE (Squamous cell carcinoma antigen recognized by T-cells 3 OS=Mus musculus GN=Sart3 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-26
Identity = 70/183 (38.25%), Postives = 110/183 (60.11%), Query Frame = 1 

Query: 24  NGDEPMPDLPQNPADSSSSDSDSEDDESNQN--LHLQSLQSQLSSNPSDYDAHVQYIKIL 83
           +GDE   D   + A+SS+ + + E DE  +   L ++ L+ QLS N  DY+ HV+ I++L
Sbjct: 66  DGDEE--DAMASSAESSAGEDEWEYDEEEEKNQLEIERLEEQLSINGYDYNCHVELIRLL 125

Query: 84  RKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASISTGPEALAAIERLYERGVFDYLS 143
           R  G++  +R AR+ MSE+FPLT  +W EW  DE S++        +  L+ER V DY+ 
Sbjct: 126 RLEGELSRVRAARQKMSELFPLTEELWLEWLHDEISMAMDGLDREHVYELFERAVKDYIC 185

Query: 144 VSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTAAGLHFTEAEKLWEAYRDLEKS 203
            ++WL+Y  +      + Q     G++KVR +FERAL++ GLH T+   +WEAYR+ E +
Sbjct: 186 PNIWLEYGQY--SVGGIGQ---KGGLEKVRSVFERALSSVGLHMTKGLAIWEAYREFESA 241

Query: 204 IYQ 205
           I +
Sbjct: 246 IVE 241

[Close]
BLAST of CSPI05G18650 vs. Swiss-Prot
Match: SART3_HUMAN (Squamous cell carcinoma antigen recognized by T-cells 3 OS=Homo sapiens GN=SART3 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.3e-26
Identity = 67/170 (39.41%), Postives = 102/170 (60.00%), Query Frame = 1 

Query: 37  ADSSSSDSDSEDDESNQN--LHLQSLQSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAR 96
           A+SS  + + E DE  +   L ++ L+ QLS N  DY+ HV  I++LR  G++  +R AR
Sbjct: 76  AESSPGEYEWEYDEEEEKNQLEIERLEEQLSINVYDYNCHVDLIRLLRLEGELTKVRMAR 135

Query: 97  EAMSEIFPLTPSMWQEWAEDEASISTGPEALAAIERLYERGVFDYLSVSLWLDYLNFIRE 156
           + MSEIFPLT  +W EW  DE S++        +  L+E+ V DY+  ++WL+Y  +   
Sbjct: 136 QKMSEIFPLTEELWLEWLHDEISMAQDGLDREHVYDLFEKAVKDYICPNIWLEYGQY--S 195

Query: 157 YDPLVQDCATSGIKKVRDLFERALTAAGLHFTEAEKLWEAYRDLEKSIYQ 205
              + Q     G++KVR +FERAL++ GLH T+   LWEAYR+ E +I +
Sbjct: 196 VGGIGQ---KGGLEKVRSVFERALSSVGLHMTKGLALWEAYREFESAIVE 240

[Close]
BLAST of CSPI05G18650 vs. Swiss-Prot
Match: SART3_PONAB (Squamous cell carcinoma antigen recognized by T-cells 3 OS=Pongo abelii GN=SART3 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.3e-26
Identity = 67/170 (39.41%), Postives = 102/170 (60.00%), Query Frame = 1 

Query: 37  ADSSSSDSDSEDDESNQN--LHLQSLQSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAR 96
           A+SS  + + E DE  +   L ++ L+ QLS N  DY+ HV  I++LR  G++  +R AR
Sbjct: 76  AESSPGEYEWEYDEEEEKNQLEIERLEEQLSINVYDYNCHVDLIRLLRLEGELTKVRMAR 135

Query: 97  EAMSEIFPLTPSMWQEWAEDEASISTGPEALAAIERLYERGVFDYLSVSLWLDYLNFIRE 156
           + MSEIFPLT  +W EW  DE S++        +  L+E+ V DY+  ++WL+Y  +   
Sbjct: 136 QKMSEIFPLTEELWLEWLHDEISMAQDGLDREHVYDLFEKAVKDYICPNIWLEYGQY--S 195

Query: 157 YDPLVQDCATSGIKKVRDLFERALTAAGLHFTEAEKLWEAYRDLEKSIYQ 205
              + Q     G++KVR +FERAL++ GLH T+   LWEAYR+ E +I +
Sbjct: 196 VGGIGQ---KGGLEKVRSVFERALSSVGLHMTKGLALWEAYREFESAIVE 240

[Close]
BLAST of CSPI05G18650 vs. Swiss-Prot
Match: YOW4_SCHPO (Uncharacterized RNA-binding protein C1861.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1861.04c PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.8e-12
Identity = 45/177 (25.42%), Postives = 86/177 (48.59%), Query Frame = 1 

Query: 43  DSDSEDDESNQNLHLQSLQSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFP 102
           D D ++    + L L  L      +P +YD+H++ I+ L+++     L +AR+    IFP
Sbjct: 15  DIDPQEQNEKKPLLLDELTKFTILHPYNYDSHIKLIEELKRLDKKKELSEARKTFQSIFP 74

Query: 103 LTPSMWQEWAEDEASISTGPEALAAIERLYERGVFDYLSVSLWLDYLNF---IREYDPLV 162
           L+  +W ++  DE       +    I+ L++  V DYLS+ +W  YL F   + +     
Sbjct: 75  LSEDLWVDYLLDECKNCRTLDDYVRIKTLFDLAVQDYLSIKIWCMYLEFTLNLMDTSSFE 134

Query: 163 QD-CATSGIKKVRD---LFERALTAAGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ 213
           Q+    +G+  + D   LFERA      HF++++ +W  Y +  ++    + E + +
Sbjct: 135 QEQSELNGVITLTDAHSLFERAYQTCKFHFSKSQCVWTLYLEFLQTFGDALFEGEEE 191

[Close]
BLAST of CSPI05G18650 vs. TrEMBL
Match: A0A0A0KP58_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G528420 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 5.6e-114
Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 1 

Query: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60
           MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL
Sbjct: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60

Query: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120
           QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST
Sbjct: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120

Query: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180
           GPEALAAIERLYERGVFDYLSVS WLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA
Sbjct: 121 GPEALAAIERLYERGVFDYLSVSFWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180

Query: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQV 214
           AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQV
Sbjct: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQV 213

[Close]
BLAST of CSPI05G18650 vs. TrEMBL
Match: M5XMN7_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015319mg PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 8.2e-65
Identity = 123/192 (64.06%), Postives = 158/192 (82.29%), Query Frame = 1 

Query: 24  NGDEPMPDLPQNPADSSSSDSDS---EDDESNQNLHLQSLQSQLSSNPSDYDAHVQYIKI 83
           NGD+PMPDLP     SS SDSDS   + D++ +NL LQ+L+++LS+NP +YDAHVQYIKI
Sbjct: 20  NGDQPMPDLPDQDPGSSDSDSDSGSEDGDQAQKNLQLQTLEAELSTNPGNYDAHVQYIKI 79

Query: 84  LRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASISTGPEALAAIERLYERGVFDYL 143
           LR++ DI+ LR+AREAM+E+FPLTPSMWQ+WA+DEAS+STG +A  AIE+LYERGVF+YL
Sbjct: 80  LRQIADIEKLRQAREAMNELFPLTPSMWQDWAKDEASLSTGSDAFPAIEKLYERGVFEYL 139

Query: 144 SVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTAAGLHFTEAEKLWEAYRDLEK 203
           S+SLW DYL+F++E DP V++C+ +GI K RDLFERALTAAGLH +E  KLWEAYR  E+
Sbjct: 140 SISLWRDYLDFVQENDPSVRECSPAGILKARDLFERALTAAGLHVSEGSKLWEAYRKFEQ 199

Query: 204 SIYQTIAETDAQ 213
           +I+    ETD Q
Sbjct: 200 AIFDATDETDNQ 211

[Close]
BLAST of CSPI05G18650 vs. TrEMBL
Match: A0A068TMV4_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00015071001 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.1e-61
Identity = 125/220 (56.82%), Postives = 167/220 (75.91%), Query Frame = 1 

Query: 2   DEPISSKAETPLPTNSDQGYSVNG----DEPMPDLPQNPADSSSSDSDSE-----DDESN 61
           D P+S   E P P   +Q  S+NG    D+ M D  QNP + S SDSDS+     DDE+ 
Sbjct: 8   DSPLSLPEELP-PQPVEQVTSINGNDDNDQSMADA-QNPKEDSDSDSDSDTESDSDDEAQ 67

Query: 62  QNLHLQSLQSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWA 121
            NL +Q+L+++LS+NPS+YDAHVQYI+ LRK GD++ LR+AREAMS +FPL+P +W+EWA
Sbjct: 68  LNLQIQTLEAELSNNPSNYDAHVQYIRALRKQGDVEKLRQAREAMSALFPLSPELWREWA 127

Query: 122 EDEASISTGPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRD 181
            DE ++S+GPEAL AIE+LYERGV DYLSV LW DY+NF++EYDPLV++C+T+GI K R+
Sbjct: 128 RDETTLSSGPEALPAIEQLYERGVLDYLSVDLWCDYINFVQEYDPLVRECSTNGISKARN 187

Query: 182 LFERALTAAGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ 213
           LFERA+ AAGLH  E  +++EAYR+ E++I  TI ETD +
Sbjct: 188 LFERAVIAAGLHVAEGSRIYEAYREFEQAIALTIGETDIE 225

[Close]
BLAST of CSPI05G18650 vs. TrEMBL
Match: A0A0J8C2Y4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g145740 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.3e-57
Identity = 115/213 (53.99%), Postives = 160/213 (75.12%), Query Frame = 1 

Query: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSE-DDESNQNLHLQS 60
           M EP+ S    P     D G   N       L  +  D SSS+S+SE DDE  + L L++
Sbjct: 1   MSEPMKSHEILPSENPDDNGEHTN------TLAASSMDESSSESNSESDDEVQEALELKT 60

Query: 61  LQSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIS 120
           L+S+LS +PS+YD HV+YIK+LRK+G+ID LR+ARE+MSEIFPLTP+MWQEWA+DE ++S
Sbjct: 61  LESELSRSPSNYDLHVKYIKLLRKLGEIDKLRQARESMSEIFPLTPTMWQEWAKDETTLS 120

Query: 121 TGPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALT 180
           + PEA+AAIE++YERG  DY+SV LW DYLNF++E++P +++C+ +G+ K R+LFERALT
Sbjct: 121 SRPEAIAAIEKIYERGASDYMSVPLWCDYLNFMQEHEPSIRECSAAGVSKARNLFERALT 180

Query: 181 AAGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ 213
           AAGLHF+E  K+WE YR+ E++I  TI ++D +
Sbjct: 181 AAGLHFSEGIKIWENYREFEQAICLTIEDSDTE 207

[Close]
BLAST of CSPI05G18650 vs. TrEMBL
Match: V4T006_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000238mg PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.7e-57
Identity = 115/201 (57.21%), Postives = 151/201 (75.12%), Query Frame = 1 

Query: 24  NGDEPMPDLPQNP-----------ADSSSSDSDSE---DDESNQNLHLQSLQSQLSSNPS 83
           +GD  +PD+  NP           +D+S SDSDS+   +DE+ Q++ LQ+LQ QLS+ PS
Sbjct: 17  DGDTVIPDVENNPKPTTKDNSSDSSDASDSDSDSDSESEDEAKQSMELQTLQYQLSNEPS 76

Query: 84  DYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASISTGPEALAAIE 143
           +YD HVQYIK+LRK+G+I+ LR+AREAM+EIFPLTP+MW+EWA DE SISTGPEAL  +E
Sbjct: 77  NYDTHVQYIKVLRKMGEIEKLRQAREAMNEIFPLTPAMWREWARDETSISTGPEALLGVE 136

Query: 144 RLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTAAGLHFTEAE 203
           ++YERGV DYLSV LW DYL F++EYDP +++    GI K R+LFERA+TAAGLH +E  
Sbjct: 137 KIYERGVSDYLSVPLWCDYLKFVQEYDPSIREFLPDGISKARNLFERAVTAAGLHVSEGS 196

Query: 204 KLWEAYRDLEKSIYQTIAETD 211
           K+WE YR+ E  I+  I ET+
Sbjct: 197 KIWELYREFELDIFCRIDETN 217

[Close]
BLAST of CSPI05G18650 vs. TAIR10
Match: AT4G24270.2 (AT4G24270.2 EMBRYO DEFECTIVE 140)

HSP 1 Score: 194.5 bits (493), Expect = 6.6e-50
Identity = 103/204 (50.49%), Postives = 141/204 (69.12%), Query Frame = 1 

Query: 10  ETPLPTNSDQGYS-VNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSLQSQLSSNP 69
           +T L +N+DQ     + + P    P +  DS  SDSDSED E+  N  + +L+S+LS+NP
Sbjct: 5   DTELVSNTDQKMEDASAENPARADPPSSDDSGDSDSDSED-EAESNQQIVTLESELSANP 64

Query: 70  SDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASISTGPEALAAI 129
            +YDA+VQYIK+LRK  +++ LR+AREAMS IFPL+PS+W EWA DEAS++   E +  I
Sbjct: 65  YNYDAYVQYIKLLRKTANLEKLRQAREAMSAIFPLSPSLWLEWARDEASLAAS-ENVPEI 124

Query: 130 ERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTAAGLHFTEA 189
             LYERG+ DY SVSLW DYL+F+ E+DP V+   + GI K+R LFERA+ AAG H TE 
Sbjct: 125 VMLYERGLSDYQSVSLWCDYLSFMLEFDPSVRGYPSEGISKMRSLFERAIPAAGFHVTEG 184

Query: 190 EKLWEAYRDLEKSIYQTIAETDAQ 213
            ++WE YR+ E+ +  TI E D +
Sbjct: 185 NRIWEGYREFEQGVLATIDEADIE 206

[Close]
BLAST of CSPI05G18650 vs. NCBI nr
Match: gi|700196228|gb|KGN51405.1| (hypothetical protein Csa_5G528420 [Cucumis sativus])

HSP 1 Score: 418.3 bits (1074), Expect = 8.0e-114
Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 1 

Query: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60
           MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL
Sbjct: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60

Query: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120
           QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST
Sbjct: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120

Query: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180
           GPEALAAIERLYERGVFDYLSVS WLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA
Sbjct: 121 GPEALAAIERLYERGVFDYLSVSFWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180

Query: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQV 214
           AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQV
Sbjct: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQV 213

[Close]
BLAST of CSPI05G18650 vs. NCBI nr
Match: gi|778703789|ref|XP_004142811.2| (PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 416.8 bits (1070), Expect = 2.3e-113
Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 1 

Query: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60
           MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL
Sbjct: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60

Query: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120
           QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST
Sbjct: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120

Query: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180
           GPEALAAIERLYERGVFDYLSVS WLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA
Sbjct: 121 GPEALAAIERLYERGVFDYLSVSFWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180

Query: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ 213
           AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ
Sbjct: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ 212

[Close]
BLAST of CSPI05G18650 vs. NCBI nr
Match: gi|778703792|ref|XP_011655427.1| (PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 416.8 bits (1070), Expect = 2.3e-113
Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 1 

Query: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60
           MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL
Sbjct: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60

Query: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120
           QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST
Sbjct: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120

Query: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180
           GPEALAAIERLYERGVFDYLSVS WLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA
Sbjct: 121 GPEALAAIERLYERGVFDYLSVSFWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180

Query: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ 213
           AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ
Sbjct: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ 212

[Close]
BLAST of CSPI05G18650 vs. NCBI nr
Match: gi|659121285|ref|XP_008460582.1| (PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 [Cucumis melo])

HSP 1 Score: 396.0 bits (1016), Expect = 4.3e-107
Identity = 200/212 (94.34%), Postives = 206/212 (97.17%), Query Frame = 1 

Query: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60
           MDEPISS AETPLPTNSDQG SVNGDEPMPDLPQNP+DSSSSDSDSEDDESNQNL L SL
Sbjct: 1   MDEPISSNAETPLPTNSDQGNSVNGDEPMPDLPQNPSDSSSSDSDSEDDESNQNLQLHSL 60

Query: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120
           QSQLSSN SDYDAHVQYIK+LRKVGDIDNLRKAREAMSEIFPL+PSMWQEWA+DEASI+T
Sbjct: 61  QSQLSSNASDYDAHVQYIKLLRKVGDIDNLRKAREAMSEIFPLSPSMWQEWAKDEASINT 120

Query: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180
           GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA
Sbjct: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180

Query: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ 213
           AGLHFTEAEKLWEAYRD EK+IYQTIAETDAQ
Sbjct: 181 AGLHFTEAEKLWEAYRDFEKAIYQTIAETDAQ 212

[Close]
BLAST of CSPI05G18650 vs. NCBI nr
Match: gi|659121287|ref|XP_008460583.1| (PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3 isoform X2 [Cucumis melo])

HSP 1 Score: 396.0 bits (1016), Expect = 4.3e-107
Identity = 200/212 (94.34%), Postives = 206/212 (97.17%), Query Frame = 1 

Query: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60
           MDEPISS AETPLPTNSDQG SVNGDEPMPDLPQNP+DSSSSDSDSEDDESNQNL L SL
Sbjct: 1   MDEPISSNAETPLPTNSDQGNSVNGDEPMPDLPQNPSDSSSSDSDSEDDESNQNLQLHSL 60

Query: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120
           QSQLSSN SDYDAHVQYIK+LRKVGDIDNLRKAREAMSEIFPL+PSMWQEWA+DEASI+T
Sbjct: 61  QSQLSSNASDYDAHVQYIKLLRKVGDIDNLRKAREAMSEIFPLSPSMWQEWAKDEASINT 120

Query: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180
           GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA
Sbjct: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180

Query: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ 213
           AGLHFTEAEKLWEAYRD EK+IYQTIAETDAQ
Sbjct: 181 AGLHFTEAEKLWEAYRDFEKAIYQTIAETDAQ 212

The following BLAST results are available for this feature:
BLAST of CSPI05G18650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SART3_DANRE1.1e-3040.85Squamous cell carcinoma antigen recognized by T-cells 3 OS=Danio rerio GN=sart3 ... [more]
SART3_MOUSE1.3e-2638.25Squamous cell carcinoma antigen recognized by T-cells 3 OS=Mus musculus GN=Sart3... [more]
SART3_HUMAN6.3e-2639.41Squamous cell carcinoma antigen recognized by T-cells 3 OS=Homo sapiens GN=SART3... [more]
SART3_PONAB6.3e-2639.41Squamous cell carcinoma antigen recognized by T-cells 3 OS=Pongo abelii GN=SART3... [more]
YOW4_SCHPO6.8e-1225.42Uncharacterized RNA-binding protein C1861.04c OS=Schizosaccharomyces pombe (stra... [more]
BLAST of CSPI05G18650 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KP58_CUCSA5.6e-11499.53Uncharacterized protein OS=Cucumis sativus GN=Csa_5G528420 PE=4 SV=1[more]
M5XMN7_PRUPE8.2e-6564.06Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015319mg PE=4 S... [more]
A0A068TMV4_COFCA1.1e-6156.82Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00015071001 PE=4 SV=1[more]
A0A0J8C2Y4_BETVU1.3e-5753.99Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g145740 PE=4 S... [more]
V4T006_9ROSI1.7e-5757.21Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000238mg PE=4 SV=1[more]
BLAST of CSPI05G18650 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G24270.26.6e-5050.49 EMBRYO DEFECTIVE 140[more]
BLAST of CSPI05G18650 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700196228|gb|KGN51405.1|8.0e-11499.53hypothetical protein Csa_5G528420 [Cucumis sativus][more]
gi|778703789|ref|XP_004142811.2|2.3e-11399.53PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 [C... [more]
gi|778703792|ref|XP_011655427.1|2.3e-11399.53PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3 isoform X2 [C... [more]
gi|659121285|ref|XP_008460582.1|4.3e-10794.34PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 [C... [more]
gi|659121287|ref|XP_008460583.1|4.3e-10794.34PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3 isoform X2 [C... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003107HAT
IPR011990TPR-like_helical_dom_sf
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006397 mRNA processing
biological_process GO:0006396 RNA processing
biological_process GO:0009560 embryo sac egg cell differentiation
cellular_component GO:0005634 nucleus
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G18650.1CSPI05G18650.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 123..154
score: 11.0coord: 85..117
score: 36.0coord: 165..201
score:
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 57..133
score: 4.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 62..205
score: 2.82