CSPI05G18570 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCAGGGCAAACAATGCATCTCACCACCCATCCTGAAGTGCCTAAAAATTTAAAAATCTTGACGACCCCAGCCTCATTTTTAGCCCTTCGTATGAAGAAAGAAAAAACTCTGTTCTTCAAGGTTCTCTGAAATTTGATCCACGAACTAGTCTAAGTGAGACTTGACTAATGGCAATGATTTTTTGTATTCCACATCTTCCACGATGAACTTACCATCATCAAACCAAATGCAGAAATAGGAGTCGTTAATTTGACTATTCACTTTGTTTGTTTGTCTTTTTTTGTTTGTGGTTTTATTGTAGGTTAGCATTTTTTCATTACTTCAATCAAAAGTTTCATCTTCTTTAAAGAAAAAGAAAAATTGACCTTCCTGACAGTCCCAGCTTATTCCACCTCTGTGTACACTGGGATGAAAGGATGGGCCTTAATCTAGTAAGAAGTTTAGTGTTATTTAGAATTGTTAAACTTTTGGTCCATTGATTTTACTATGAATCTATCATTTTGATTGATATAATGTTAACATTTCAGGTGCTTTCTGTGGCAGTATACAACCACTATAAGAGGATATATCATTCTTCATTGCAGAAAACGTTAGTTTGTAAGAGTTGTCTAGTTGTGTCCCTTTGCAATCCTTTTTGAAATATAATTTAAATATGCTTAATATTGCTTACCAATGTTTATGGAGTTCACTGCAATAGCCATATTTAAAGAAAAATAGTATTATTTCTGATGGAAAAATATTTCTGTGATGTATGATTGTGCTTGGCTTTGAGTTGGTGTCTACATTTGTATTTAGATCAGGGCAAGGACCGCTGGGTATTGAATTGGAGAATGATGATAATGAAACTGTGGAACTGGAAAAGAGTAATCTGTTGCTAATGGGTCCTACAGGCTCGGGTACGATTGATTTTCTTCTTTATTTGTTTTTTTGTAAGAGCCTTAATTTGTTAGAGGTTTTTGCTTAACCATTTATGGAATCTCTAAGGATAGGGAAGACATTACTCGCAAAAACCCTTGCTCGTGTGGTGAATGTGCCCTTCACCATAGCTGATGCTACTGCCTTAACTCAGGCAAGTGCATTTTCAGGATAGTTTTCTTTTCTTTTCTTGTTAGTGTCAGTGTCAGTGTTATGTTTTTTCTCTCTTTTTAAATTATATATAAACAGAACACTTCATCGACAAAACCAAAACAGCATACATGAAAAGGGGATATGTATGAGAAACATCTCCCTCCTAATCAAGTTAATCAAGAAAATGACAAAATTACAAAGTCCCCTCCCCTGTGAAGAGCACACTAGGCAGGGGCTTTATACTGTACGATTTACCAGAAATTACAAAAGGATTTATAGAAATTTGTAAAAAGTCTTATTATATCTTTCAATCCTAAGCAGCGCAAGTAAAGACTTCCTGCCATTTTTCTGGAGGACCCTAATTTTTCATAGAAGTCGTGGACAAGAGAGAATTTGAGGGAGCAAAGAGGAAGTATCCTTTGGTTTACACCTTTACACCAAGCCATGTAAAAAGTTCAAACTAACAAAAAAGAATAAAGTTTAAAGAATAACCTTCCAGCTCTTATTTGCAAGATGATGGTGAAGAAAGAGATGGCATTAAAAGTGGTGTTACCAATAATCTGCCCAAAGTAACTATGAGTCCCTATAATAATACTGATGGTGGTAGGCAGTAGACGTTGACTCAATGATAACGACAACTAGGTTTTACTCGTGGAGTTCAGTCTTTTTCTCCTTGGGGCTCCATCGGTCTTTTCCCAATAGGGAAGTGTCAGAGGTGACTTCTTTTCTTTCCTTGATTGAGAATTTTGACTTTAGACAGGAGAGGAAGGATGTTTGGGTGTGGAGTCATCTTGTAGTTTTTTCTTTCAGTTTTTACTTGACCTCTCTCCCGCTGTTGAGCCGGTTTTTGACGCTTTATGGAGGATAAAGATTCCAAAGAAGAAAGTTATGTTCTTTTTTGACAAGTTTTACTCGGGCATAGTGAACACAAAGTATAGGCTTTGGAGAAAGATGTCTTCTCTTTGGGTCCTTGGGGTTGTATCCTTTGTCGGAAGGCGGAGGAAACCTTGAGCATCTTCTTTGGGAGTGTCAGTTTTCTAGTTTTGTGCAGAATGGTTTCTTTAAGGAGTTCAGTTTCGCACGTGCTTGGCAGAGGGGTGTTTGTTTAATGATTGATTGGAGAGTTCCTCCTCCATCAATCTTTCAAAGAGAAAGGACGTTTTCTTTGGTAGCTGGGCTGTGTGCTTTGTGGGACCTTTGGGGGAGAGAAACAATTGTGTGTTTTGTGGCGTGGAGAGACTAATAAGATTCAGTCCTTAGTGAGGTTTCATGTTTCTCTTTGAGTTTGTCTCAATTTTTATTTTTTTAATTATTCTCTAGGTAATATTTTACTTAGACAGAAACCTTGTATCTAAGGGTTTTGTGGGCTTGGTTTTTTTGTATGCTGTTGCATGCTAATTTTTTTTTATCAACGAATGCAGTTGTTTTTATCAAAAGAAAAAAAAACTAGGTTTTTTTAATAAGAAACAGGGTTTATGTTCATAAAACCAGCAAAAGAGCCAAAAGGACAACCAAAGGGCAGGGTAGAGGAATTCTTGTGTGCTATTTAGATTGAGAGGAATTCTTGTATCTTCAAAAACAAGAAATGCTACTTCTAAGCTCTCCTCTTGTCAATAATGTATCTTTTTCTGTCTTGGTGTAATTTGAACCCTTTTTATTATTTTGATTTCTTCTTTGTCCTAGCTAACTGAATGGCTTTTTGAAAGTTACCGATAAGAAGTATCAATCAAATGATATGTTTCCTGAAAAAGTCAGGATCTGAATTGATACGATCATAGTTTGGAGGAATTGAGCCTCAATCATCTCAAAAATATTGTATTGATCAAAATAGTTCAAATTCTTTTTACCAAGCAGCACCTTTTCAGTTGGCTCAGTAGATTTTAATTCTCACTCTCCTTTGCAGGCAGGTTATGTCGGAGAGGATGTGGAATCAATATTATACAAGCTCCTTCTGGTATTCATTTATTTGTTTTCCCTCCTGTCTCAGTTACTTTCTAAGTCTTTTTTGCTTTCAGAAAAAGAAACATTTCATTGTTAAATGAAATAAAAAGCAATTAGTGACTACTGAGTACTGACTAAGAAAGATAAGCTAGAATGAATAAAAAGGTTCTTAATTTTGCGCCAAGAAAAAGAAGACCAAACCTTCTCCATATGAGTAGTGAAGGAGTAAGAAGTGTCAATAAACCGAGCAAAAATCTAAGTTTTGATTTAAATCATTTCAACCACTTTTAAATCTAAAGGGTCCTGGTAGAACTCAGGTTTAACAAAGGGCACAACTGTGATAAGCTAGAATGAATAAAAAGGTTCTTAAATTTGCGCCAGAAAAAAGACCGAACCTTCTCGCATAAGTAGTAAAGGAGTAAGAAGTGACAATAAACCGAGCAAAAATCTAAGTTTTGATTCAAATCATTCAACCACCTTCTTTGAATCTGATGGTTCCTGAGTAGATGGACTCTGAGGTTTAAAAAAGGGTACAACTGTGGTACGGTTTGTCTATTTAATTTTATATTCTAGAACTATTAAGTTTTTGAAGTGAGCAAAAATAATAGCACTTTTTTTTTTAGTAATAGAATTTATTAATTTTTTTGAAAAGGAAATGAGCCTGACCAACCTATACTGGCTTAGTTGTTAAGATTTCAAGGTCATCGGGTTTCTTGAACTGTGCCTAATAATTAATTAATTTATTTATTAATTTATTTGTTCCTTTCGAGAAACTATGTGAAGTTTCTGGTAAAAAAATTTTCAATATTTTTGTTGAATACTTTCATGCTTTCGTTAAATTATCCTTTTACCTTTGTTCTTTCCGTACATGGTGCTTTTAATTGTACAGGATGCAGAGTTCAACGTAGAAGCAGCTCAACGTGGGATAGTATATATTGATGAAGTTGATAAGATAACTAAGAAGGTATGCATTGTGAAATTGTCTAAGATCTACAGGCTGTCGTTGTCAAATTTATCAAATTTTTCCTAACTTGCTTTATTTCTTATTAGAGTGAGAGCTTAAACTCTGGCAGAGATGTATCTGGCGAGGGGGTCCAGCAGGCACTGCTGAAAATGCTTGAAGGAACTGTGGGTATTCAATTTGACAGTAATATCTTTCATTTTTTGATGTAGATAGTAGTTCGTTTATAATACTTTGTATTCTTCTTGGACCTTGCGAGGTATTTGTTTTATTATCATTCACTGTATTTTTTTCTTTTAATATTGGCTGGCTTCCTACTTTTAGAAAGAAAAAAGAGAAACAAAAATCATTTTGAACTTCTCATTTTAGTTCAAAGCTGTTTACTTTCTTTCAGGTAGTGGATGTTCCAGATACAGGTGCTCGAAAGCATCCTCGGGGTGATACAATTCAGGTGGAGCTGAACTGCAATTTAGTATTGTTTTTCTTGGTTTCCTTCCTTGATATAATTATACCATGCAATCACATTTCAATCCTACTGATGGAACACCAAGGTTGTGTTCTATCAATGGAACTTTTATTGATAAATGAAAGAATCGAATACAAGAACAAAATAAAATAATAAAGAAACGAATTGAGAAATCTCAATTCGGTTACAATATCTCTTTTACCTTCTCTCTCAAAGGTGCACAGATTCCAGATTCAATTCTCAAAATCGAACTACCCCTCCCTCCAATAA ATGGATTCAGGGCAAACAATGCATCTCACCACCCATCCTGAAGTGCCTAAAAATTTAAAAATCTTGACGACCCCAGCCTCATTTTTAGCCCTTCGTATGAAGAAAGAAAAAACTCTGTTCTTCAAGGTGCTTTCTGTGGCAGTATACAACCACTATAAGAGGATATATCATTCTTCATTGCAGAAAACATCAGGGCAAGGACCGCTGGGTATTGAATTGGAGAATGATGATAATGAAACTGTGGAACTGGAAAAGAGTAATCTGTTGCTAATGGGTCCTACAGGCTCGGGGAAGACATTACTCGCAAAAACCCTTGCTCGTGTGGTGAATGTGCCCTTCACCATAGCTGATGCTACTGCCTTAACTCAGGCAGGTTATGTCGGAGAGGATGTGGAATCAATATTATACAAGCTCCTTCTGGATGCAGAGTTCAACGTAGAAGCAGCTCAACGTGGGATAGTATATATTGATGAAGTTGATAAGATAACTAAGAAGAGTGAGAGCTTAAACTCTGGCAGAGATGTATCTGGCGAGGGGGTCCAGCAGGCACTGCTGAAAATGCTTGAAGGAACTGTAGTGGATGTTCCAGATACAGGTGCTCGAAAGCATCCTCGGGGTGATACAATTCAGGTGGAGCTGAACTGCAATTTAGTGCACAGATTCCAGATTCAATTCTCAAAATCGAACTACCCCTCCCTCCAATAA ATGGATTCAGGGCAAACAATGCATCTCACCACCCATCCTGAAGTGCCTAAAAATTTAAAAATCTTGACGACCCCAGCCTCATTTTTAGCCCTTCGTATGAAGAAAGAAAAAACTCTGTTCTTCAAGGTGCTTTCTGTGGCAGTATACAACCACTATAAGAGGATATATCATTCTTCATTGCAGAAAACATCAGGGCAAGGACCGCTGGGTATTGAATTGGAGAATGATGATAATGAAACTGTGGAACTGGAAAAGAGTAATCTGTTGCTAATGGGTCCTACAGGCTCGGGGAAGACATTACTCGCAAAAACCCTTGCTCGTGTGGTGAATGTGCCCTTCACCATAGCTGATGCTACTGCCTTAACTCAGGCAGGTTATGTCGGAGAGGATGTGGAATCAATATTATACAAGCTCCTTCTGGATGCAGAGTTCAACGTAGAAGCAGCTCAACGTGGGATAGTATATATTGATGAAGTTGATAAGATAACTAAGAAGAGTGAGAGCTTAAACTCTGGCAGAGATGTATCTGGCGAGGGGGTCCAGCAGGCACTGCTGAAAATGCTTGAAGGAACTGTAGTGGATGTTCCAGATACAGGTGCTCGAAAGCATCCTCGGGGTGATACAATTCAGGTGGAGCTGAACTGCAATTTAGTGCACAGATTCCAGATTCAATTCTCAAAATCGAACTACCCCTCCCTCCAATAA
BLAST of CSPI05G18570 vs. Swiss-Prot
Match: CLPX3_ARATH (CLP protease regulatory subunit CLPX3, mitochondrial OS=Arabidopsis thaliana GN=CLPX3 PE=2 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 3.6e-67 Identity = 132/171 (77.19%), Postives = 151/171 (88.30%), Query Frame = 1
BLAST of CSPI05G18570 vs. Swiss-Prot
Match: CLPX1_ARATH (CLP protease regulatory subunit CLPX1, mitochondrial OS=Arabidopsis thaliana GN=CLPX1 PE=2 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 6.2e-67 Identity = 133/171 (77.78%), Postives = 146/171 (85.38%), Query Frame = 1
BLAST of CSPI05G18570 vs. Swiss-Prot
Match: CLPX2_ARATH (CLP protease regulatory subunit CLPX2, mitochondrial OS=Arabidopsis thaliana GN=CLPX2 PE=3 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 2.1e-62 Identity = 125/173 (72.25%), Postives = 147/173 (84.97%), Query Frame = 1
BLAST of CSPI05G18570 vs. Swiss-Prot
Match: CLPX_MICAN (ATP-dependent Clp protease ATP-binding subunit ClpX OS=Microcystis aeruginosa (strain NIES-843) GN=clpX PE=3 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 1.7e-53 Identity = 107/171 (62.57%), Postives = 134/171 (78.36%), Query Frame = 1
BLAST of CSPI05G18570 vs. Swiss-Prot
Match: CLPX_CYAP7 (ATP-dependent Clp protease ATP-binding subunit ClpX OS=Cyanothece sp. (strain PCC 7424) GN=clpX PE=3 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 2.5e-52 Identity = 111/172 (64.53%), Postives = 137/172 (79.65%), Query Frame = 1
BLAST of CSPI05G18570 vs. TrEMBL
Match: A0A0A0KP53_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G527880 PE=4 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 2.1e-90 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 1
BLAST of CSPI05G18570 vs. TrEMBL
Match: F6HJZ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g01860 PE=4 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 1.7e-71 Identity = 140/171 (81.87%), Postives = 157/171 (91.81%), Query Frame = 1
BLAST of CSPI05G18570 vs. TrEMBL
Match: K4B1M5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 1.4e-70 Identity = 140/171 (81.87%), Postives = 154/171 (90.06%), Query Frame = 1
BLAST of CSPI05G18570 vs. TrEMBL
Match: K3YQR2_SETIT (Uncharacterized protein OS=Setaria italica GN=SETIT_016606mg PE=4 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 6.0e-69 Identity = 138/171 (80.70%), Postives = 152/171 (88.89%), Query Frame = 1
BLAST of CSPI05G18570 vs. TrEMBL
Match: C5XV02_SORBI (Putative uncharacterized protein Sb04g023280 OS=Sorghum bicolor GN=Sb04g023280 PE=4 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 1.0e-68 Identity = 138/171 (80.70%), Postives = 152/171 (88.89%), Query Frame = 1
BLAST of CSPI05G18570 vs. TAIR10
Match: AT1G33360.1 (AT1G33360.1 ATP-dependent Clp protease) HSP 1 Score: 256.1 bits (653), Expect = 2.0e-68 Identity = 132/171 (77.19%), Postives = 151/171 (88.30%), Query Frame = 1
BLAST of CSPI05G18570 vs. TAIR10
Match: AT5G53350.1 (AT5G53350.1 CLP protease regulatory subunit X) HSP 1 Score: 255.4 bits (651), Expect = 3.5e-68 Identity = 133/171 (77.78%), Postives = 146/171 (85.38%), Query Frame = 1
BLAST of CSPI05G18570 vs. TAIR10
Match: AT5G49840.1 (AT5G49840.1 ATP-dependent Clp protease) HSP 1 Score: 240.4 bits (612), Expect = 1.2e-63 Identity = 125/173 (72.25%), Postives = 147/173 (84.97%), Query Frame = 1
BLAST of CSPI05G18570 vs. NCBI nr
Match: gi|700196223|gb|KGN51400.1| (hypothetical protein Csa_5G527880 [Cucumis sativus]) HSP 1 Score: 340.1 bits (871), Expect = 3.0e-90 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 1
BLAST of CSPI05G18570 vs. NCBI nr
Match: gi|449450117|ref|XP_004142810.1| (PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1 [Cucumis sativus]) HSP 1 Score: 328.2 bits (840), Expect = 1.2e-86 Identity = 169/171 (98.83%), Postives = 171/171 (100.00%), Query Frame = 1
BLAST of CSPI05G18570 vs. NCBI nr
Match: gi|659121293|ref|XP_008460586.1| (PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1 [Cucumis melo]) HSP 1 Score: 321.2 bits (822), Expect = 1.5e-84 Identity = 165/171 (96.49%), Postives = 169/171 (98.83%), Query Frame = 1
BLAST of CSPI05G18570 vs. NCBI nr
Match: gi|731411260|ref|XP_010657908.1| (PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1 [Vitis vinifera]) HSP 1 Score: 279.6 bits (714), Expect = 4.9e-72 Identity = 141/171 (82.46%), Postives = 158/171 (92.40%), Query Frame = 1
BLAST of CSPI05G18570 vs. NCBI nr
Match: gi|297739450|emb|CBI29632.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 277.3 bits (708), Expect = 2.4e-71 Identity = 140/171 (81.87%), Postives = 157/171 (91.81%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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