CSPI05G18350 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAACAAGTTCAATGACGCAAGAGGCACGTCATCAGTGGGCGACACGTTAGGTTAGACATTGTTACATAATCAATTAATTGCATAAACTTGGAGTTCTATTTCTGATATCATTATGTTTTTATAGATGGCTCTCAACCTACTGCTCGCACTCCTAGAAGACGAGAGCACTTGAGGAACTTGAAGTTGGATAGATACGTGCAGCGAAATGGGAAGATCCCCATATCCATCGCTCCAGGAAAAGATAAACCGATCTCCCCACATGCCATTCTCTTCAGTTGTACCATTAGCGAGTTAACGCGAGATACTTTTCCAAGTTACGCTCTTAAGTGGACTGGCACTACTCCGGAGTACATCAAGCTTGTGAAGGAAAGTTTACAGGTAAGTTTTTAAATTACCCGTACACATATGTTACCTATGTATATATATATAATCCTAATCTGTGTGTAATTTTATTTTGTAGCAATGGTTTATGTTGGATGTCACAGATCCAACACTTACTCGGTTTGTTGAGCATTAAATGCTTACCACCTGGAAGGAGTTCAAGGGGCAGAACCACCGTCATTTTAAGAAGTTCAGTGATCCTGAACAAGCACGTGCCAACCCACCCTCCAGATTGAAGAATCGTGTGGAAGATTGGCACTTCCTCTGCGATCTCTACCTTACTTGA ATGTCAACAAGTTCAATGACGCAAGAGGCACGTCATCAGTGGGCGACACATGGCTCTCAACCTACTGCTCGCACTCCTAGAAGACGAGAGCACTTGAGGAACTTGAAGTTGGATAGATACGTGCAGCGAAATGGGAAGATCCCCATATCCATCGCTCCAGGAAAAGATAAACCGATCTCCCCACATGCCATTCTCTTCAGTTGTACCATTAGCGAGTTAACGCGAGATACTTTTCCAAGTTACGCTCTTAAGTGGACTGGCACTACTCCGGAGTACATCAAGCTTGTGAAGGAAAGTTTACAGGAGTTCAAGGGGCAGAACCACCGTCATTTTAAGAAGTTCAGTGATCCTGAACAAGCACGTGCCAACCCACCCTCCAGATTGAAGAATCGTGTGGAAGATTGGCACTTCCTCTGCGATCTCTACCTTACTTGA ATGTCAACAAGTTCAATGACGCAAGAGGCACGTCATCAGTGGGCGACACATGGCTCTCAACCTACTGCTCGCACTCCTAGAAGACGAGAGCACTTGAGGAACTTGAAGTTGGATAGATACGTGCAGCGAAATGGGAAGATCCCCATATCCATCGCTCCAGGAAAAGATAAACCGATCTCCCCACATGCCATTCTCTTCAGTTGTACCATTAGCGAGTTAACGCGAGATACTTTTCCAAGTTACGCTCTTAAGTGGACTGGCACTACTCCGGAGTACATCAAGCTTGTGAAGGAAAGTTTACAGGAGTTCAAGGGGCAGAACCACCGTCATTTTAAGAAGTTCAGTGATCCTGAACAAGCACGTGCCAACCCACCCTCCAGATTGAAGAATCGTGTGGAAGATTGGCACTTCCTCTGCGATCTCTACCTTACTTGA
BLAST of CSPI05G18350 vs. TrEMBL
Match: E5GC72_CUCME (CACTA en-spm transposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.0e-26 Identity = 71/150 (47.33%), Postives = 86/150 (57.33%), Query Frame = 1
BLAST of CSPI05G18350 vs. NCBI nr
Match: gi|307136235|gb|ADN34071.1| (CACTA en-spm transposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 127.9 bits (320), Expect = 1.5e-26 Identity = 71/150 (47.33%), Postives = 86/150 (57.33%), Query Frame = 1
BLAST of CSPI05G18350 vs. NCBI nr
Match: gi|778665376|ref|XP_011648549.1| (PREDICTED: (R)-mandelonitrile lyase 1-like [Cucumis sativus]) HSP 1 Score: 92.8 bits (229), Expect = 5.2e-16 Identity = 46/74 (62.16%), Postives = 54/74 (72.97%), Query Frame = 1
BLAST of CSPI05G18350 vs. NCBI nr
Match: gi|659093680|ref|XP_008447658.1| (PREDICTED: uncharacterized protein LOC103490067 [Cucumis melo]) HSP 1 Score: 81.3 bits (199), Expect = 1.6e-12 Identity = 40/86 (46.51%), Postives = 59/86 (68.60%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |