CSPI05G17360 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G17360
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr5 : 18567509 .. 18567947 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAAGAGAGAATCATTGAAGTCTAAACTTCATCCAAAATATCAGCCGGAAGACTATGTGAGGCAGGTATAAGCAAGCTGAATTAAAATAGTTTGGAAGAAGCAAATGAATTAGCTTCTTTACCCTGACTCTATCTCTCACAAATTATAATAGAAATTCTGGAAGATGTGAACGAAGTTTGAATTTTCCAACCACTTAAAGTGGGCTTATGATCTGCCAACAGACACAATAATTGACTTATAGCACCAAATACCTGCAGTTGCTACAATTCCTATCATCATTTGGTACACACAAAATTTTAATTGCTAATTTTCTGATAATCCAGAGAAGCCTGAATATCAGGATGTATGCTCCACAAAACAGCCTAATTATTAAAGCCACTGAAGAAGGATCATCAAATGTTCTCATTCATAGAGATCAAAATGACCAGAGGTAA

mRNA sequence

ATGAGTAAGAGAGAATCATTGAAGTCTAAACTTCATCCAAAATATCAGCCGGAAGACTATGTGAGGCAGAGAAGCCTGAATATCAGGATGTATGCTCCACAAAACAGCCTAATTATTAAAGCCACTGAAGAAGGATCATCAAATGTTCTCATTCATAGAGATCAAAATGACCAGAGGTAA

Coding sequence (CDS)

ATGAGTAAGAGAGAATCATTGAAGTCTAAACTTCATCCAAAATATCAGCCGGAAGACTATGTGAGGCAGAGAAGCCTGAATATCAGGATGTATGCTCCACAAAACAGCCTAATTATTAAAGCCACTGAAGAAGGATCATCAAATGTTCTCATTCATAGAGATCAAAATGACCAGAGGTAA
Homology
[Close]
BLAST of CSPI05G17360 vs. TrEMBL
Match: A0A0A0KU58_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G505810 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.6e-24
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1 

Query: 1  MSKRESLKSKLHPKYQPEDYVRQRSLNIRMYAPQNSLIIKATEEGSSNVLIHRDQNDQR 60
          MSKRESLKSKLHPKYQPEDYVRQRSLNIRMYAPQNSLIIKATEEGSSNVLIHRDQNDQR
Sbjct: 1  MSKRESLKSKLHPKYQPEDYVRQRSLNIRMYAPQNSLIIKATEEGSSNVLIHRDQNDQR 59

[Close]
BLAST of CSPI05G17360 vs. NCBI nr
Match: gi|700196094|gb|KGN51271.1| (hypothetical protein Csa_5G505810 [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 3.7e-24
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1 

Query: 1  MSKRESLKSKLHPKYQPEDYVRQRSLNIRMYAPQNSLIIKATEEGSSNVLIHRDQNDQR 60
          MSKRESLKSKLHPKYQPEDYVRQRSLNIRMYAPQNSLIIKATEEGSSNVLIHRDQNDQR
Sbjct: 1  MSKRESLKSKLHPKYQPEDYVRQRSLNIRMYAPQNSLIIKATEEGSSNVLIHRDQNDQR 59

The following BLAST results are available for this feature:
BLAST of CSPI05G17360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI05G17360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KU58_CUCSA2.6e-24100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G505810 PE=4 SV=1[more]
BLAST of CSPI05G17360 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI05G17360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700196094|gb|KGN51271.1|3.7e-24100.00hypothetical protein Csa_5G505810 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G17360.1CSPI05G17360.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI05G17360Csa5G505810Cucumber (Chinese Long) v2cpicuB239
CSPI05G17360CsaV3_5G026320Cucumber (Chinese Long) v3cpicucB284
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI05G17360Melon (DHL92) v3.6.1cpimedB407
CSPI05G17360Melon (DHL92) v3.6.1cpimedB340
CSPI05G17360Melon (DHL92) v3.6.1cpimedB357
CSPI05G17360Cucumber (Gy14) v2cgybcpiB180
CSPI05G17360Cucumber (Gy14) v2cgybcpiB225
CSPI05G17360Cucumber (Gy14) v2cgybcpiB231
CSPI05G17360Silver-seed gourdcarcpiB0298
CSPI05G17360Silver-seed gourdcarcpiB0721
CSPI05G17360Cucumber (Chinese Long) v3cpicucB279
CSPI05G17360Cucumber (Chinese Long) v3cpicucB293
CSPI05G17360Watermelon (97103) v2cpiwmbB370
CSPI05G17360Watermelon (97103) v2cpiwmbB392
CSPI05G17360Watermelon (97103) v2cpiwmbB416
CSPI05G17360Watermelon (97103) v2cpiwmbB428
CSPI05G17360Wax gourdcpiwgoB466
CSPI05G17360Wax gourdcpiwgoB526
CSPI05G17360Wild cucumber (PI 183967)cpicpiB152
CSPI05G17360Wild cucumber (PI 183967)cpicpiB175
CSPI05G17360Cucumber (Gy14) v1cgycpiB006
CSPI05G17360Cucumber (Gy14) v1cgycpiB056
CSPI05G17360Cucumber (Gy14) v1cgycpiB259
CSPI05G17360Cucurbita maxima (Rimu)cmacpiB305
CSPI05G17360Cucurbita maxima (Rimu)cmacpiB770
CSPI05G17360Cucurbita maxima (Rimu)cmacpiB732
CSPI05G17360Cucurbita maxima (Rimu)cmacpiB763
CSPI05G17360Cucurbita moschata (Rifu)cmocpiB297
CSPI05G17360Cucurbita moschata (Rifu)cmocpiB756
CSPI05G17360Cucurbita moschata (Rifu)cmocpiB724
CSPI05G17360Cucurbita moschata (Rifu)cmocpiB755
CSPI05G17360Cucurbita moschata (Rifu)cmocpiB870
CSPI05G17360Cucumber (Chinese Long) v2cpicuB234
CSPI05G17360Cucumber (Chinese Long) v2cpicuB246
CSPI05G17360Melon (DHL92) v3.5.1cpimeB350
CSPI05G17360Melon (DHL92) v3.5.1cpimeB365
CSPI05G17360Melon (DHL92) v3.5.1cpimeB409
CSPI05G17360Watermelon (Charleston Gray)cpiwcgB355
CSPI05G17360Watermelon (Charleston Gray)cpiwcgB364
CSPI05G17360Watermelon (Charleston Gray)cpiwcgB406
CSPI05G17360Watermelon (Charleston Gray)cpiwcgB422
CSPI05G17360Watermelon (97103) v1cpiwmB369
CSPI05G17360Watermelon (97103) v1cpiwmB377
CSPI05G17360Watermelon (97103) v1cpiwmB403
CSPI05G17360Watermelon (97103) v1cpiwmB436
CSPI05G17360Cucurbita pepo (Zucchini)cpecpiB178
CSPI05G17360Cucurbita pepo (Zucchini)cpecpiB416
CSPI05G17360Cucurbita pepo (Zucchini)cpecpiB445
CSPI05G17360Cucurbita pepo (Zucchini)cpecpiB450
CSPI05G17360Bottle gourd (USVL1VR-Ls)cpilsiB344
CSPI05G17360Bottle gourd (USVL1VR-Ls)cpilsiB351
CSPI05G17360Bottle gourd (USVL1VR-Ls)cpilsiB370