CSPI05G17350 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G17350
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionHexose transporter HXT14
LocationChr5 : 18566743 .. 18567504 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTTCAGTGAAAAAAAACGACATGTCGGCTGCATTGTAAAATAACGAAGCTGAGTCGACAAATCGATGTTCAGATTTTGAGGCACCTGGGCGCTCAAATCTCTGGTTGATTGAACTTTACAGGGAAGAAAGTTTCAAAATCTCCATTGGTTTAGGGTTAGGGTTTCTGTCTTAGGGATATGGAATTCAAGAATCTTCTCAAGGACAAGAAATTCTGGTTCGCCTCCTTCCTCATTGCTTGGGCCGCAGCTCTCCAGGTGCAGTCCCTGTTTTTAGTTCTAATTTCAACTTCACCGCTTTTCTTTTTCCATTCGTACTATCTGTTCTTGTAAAGGGGCTGAAATTTGTTCAACTTCTAATTCGTGTTTTGGGAATTATTTTGGAATGGTTAAATTCACCAAACCATAACTTTAATCAGTCAAAATCAATTTTGATGGTATGAAAATCACTATTTCTAATTCACTCCTGAGCATGCCGTTAGCTGATTTTGGATTCTTGGATTGACTCGAACTTCAATGTTGAATGTGGGGGAACTTTTGGAACAGGGGCATATGATGTATTTGCAGAAGCAGGATTCTTTCAAGCAGAAGTTTGGGACTCCCAATCAAGAAAATGATAATGAAAAATGAGGCACAATTTTCATATCACTAACCTGTAAGTTCTTTTTCAATTAAAGGGGCTAAATTGGTGGGGTTAATTCCTCATAATGATTTTTTTTGGGTGGATCCATTTGTAAATTTAGTAATAAATTTTTCCTGAAAGT

mRNA sequence

ATGGAATTCAAGAATCTTCTCAAGGACAAGAAATTCTGGTTCGCCTCCTTCCTCATTGCTTGGGCCGCAGCTCTCCAGGGGCATATGATGTATTTGCAGAAGCAGGATTCTTTCAAGCAGAAGTTTGGGACTCCCAATCAAGAAAATGATAATGAAAAATGA

Coding sequence (CDS)

ATGGAATTCAAGAATCTTCTCAAGGACAAGAAATTCTGGTTCGCCTCCTTCCTCATTGCTTGGGCCGCAGCTCTCCAGGGGCATATGATGTATTTGCAGAAGCAGGATTCTTTCAAGCAGAAGTTTGGGACTCCCAATCAAGAAAATGATAATGAAAAATGA
Homology
[Close]
BLAST of CSPI05G17350 vs. TrEMBL
Match: A0A0D2VWH7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G069200 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 3.0e-16
Identity = 40/51 (78.43%), Postives = 48/51 (94.12%), Query Frame = 1 

Query: 2  EFKNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQENDNE 53
          + + L+KDK+FWFASFLIAWAAALQGHMM++Q+QDSFKQKFGTPNQ ND+E
Sbjct: 5  DVQTLIKDKRFWFASFLIAWAAALQGHMMWMQRQDSFKQKFGTPNQSNDDE 55

[Close]
BLAST of CSPI05G17350 vs. TrEMBL
Match: A0A061FNL8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_042837 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 8.8e-16
Identity = 41/50 (82.00%), Postives = 48/50 (96.00%), Query Frame = 1 

Query: 4  KNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQENDNEK 54
          K+LLKDKKFWFASFLIAWAAALQGHMM++Q+QDSF+QKFGT NQ ND+E+
Sbjct: 7  KSLLKDKKFWFASFLIAWAAALQGHMMWMQRQDSFRQKFGTLNQSNDDEQ 56

[Close]
BLAST of CSPI05G17350 vs. TrEMBL
Match: A0A0B0NNC0_GOSAR (Hexose transporter HXT14 OS=Gossypium arboreum GN=F383_17277 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.1e-15
Identity = 39/51 (76.47%), Postives = 47/51 (92.16%), Query Frame = 1 

Query: 2  EFKNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQENDNE 53
          + + L+ DK+FWFASFLIAWAAALQGHMM++Q+QDSFKQKFGTPNQ ND+E
Sbjct: 5  DVQTLINDKRFWFASFLIAWAAALQGHMMWMQRQDSFKQKFGTPNQSNDDE 55

[Close]
BLAST of CSPI05G17350 vs. TrEMBL
Match: B9T144_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0190620 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.7e-14
Identity = 42/52 (80.77%), Postives = 46/52 (88.46%), Query Frame = 1 

Query: 1  MEFKNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQENDNE 53
          M+ K LL DKKFWFASFLI WAAALQGHMM+LQ+QDSFKQKFGT NQ NDN+
Sbjct: 1  MKAKQLLNDKKFWFASFLIGWAAALQGHMMWLQRQDSFKQKFGTLNQ-NDND 51

[Close]
BLAST of CSPI05G17350 vs. TrEMBL
Match: B9HM53_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s05100g PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.8e-14
Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = 1 

Query: 1  MEFKNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQENDN 52
          +E K LLKDKK WFASFLIAWAAALQGHMM+L++QDSFKQKFGT N++N +
Sbjct: 5  LEAKKLLKDKKLWFASFLIAWAAALQGHMMWLRRQDSFKQKFGTLNEDNSD 55

[Close]
BLAST of CSPI05G17350 vs. TAIR10
Match: AT2G39500.1 (AT2G39500.1 unknown protein)

HSP 1 Score: 74.3 bits (181), Expect = 2.5e-14
Identity = 31/48 (64.58%), Postives = 42/48 (87.50%), Query Frame = 1 

Query: 2  EFKNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQEN 50
          + K ++KDK+FW ASF+I WAA LQGHMM+LQKQ+SFKQKFGT ++++
Sbjct: 6  DVKTIVKDKRFWIASFIIVWAAGLQGHMMWLQKQESFKQKFGTIDEDD 53

[Close]
BLAST of CSPI05G17350 vs. NCBI nr
Match: gi|778703299|ref|XP_011655348.1| (PREDICTED: uncharacterized protein LOC101219597 [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 2.4e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1 

Query: 1  MEFKNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQENDNEK 54
          MEFKNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQENDNEK
Sbjct: 1  MEFKNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQENDNEK 53

[Close]
BLAST of CSPI05G17350 vs. NCBI nr
Match: gi|659127031|ref|XP_008463489.1| (PREDICTED: uncharacterized protein LOC103501645 [Cucumis melo])

HSP 1 Score: 110.2 bits (274), Expect = 1.2e-21
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 1 

Query: 1  MEFKNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQENDNEK 54
          MEFKNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQEND EK
Sbjct: 1  MEFKNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQENDTEK 53

[Close]
BLAST of CSPI05G17350 vs. NCBI nr
Match: gi|823256278|ref|XP_012460788.1| (PREDICTED: uncharacterized protein LOC105780819 [Gossypium raimondii])

HSP 1 Score: 91.7 bits (226), Expect = 4.3e-16
Identity = 40/51 (78.43%), Postives = 48/51 (94.12%), Query Frame = 1 

Query: 2  EFKNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQENDNE 53
          + + L+KDK+FWFASFLIAWAAALQGHMM++Q+QDSFKQKFGTPNQ ND+E
Sbjct: 5  DVQTLIKDKRFWFASFLIAWAAALQGHMMWMQRQDSFKQKFGTPNQSNDDE 55

[Close]
BLAST of CSPI05G17350 vs. NCBI nr
Match: gi|802672816|ref|XP_012081555.1| (PREDICTED: uncharacterized protein LOC105641579 [Jatropha curcas])

HSP 1 Score: 91.3 bits (225), Expect = 5.7e-16
Identity = 42/52 (80.77%), Postives = 48/52 (92.31%), Query Frame = 1 

Query: 1  MEFKNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQENDNE 53
          ME K LLKDKKFWFASFLIAWAAALQGHMM+LQ+QDSFKQKFGT N+ ++N+
Sbjct: 1  MEAKQLLKDKKFWFASFLIAWAAALQGHMMWLQRQDSFKQKFGTENENDNND 52

[Close]
BLAST of CSPI05G17350 vs. NCBI nr
Match: gi|590563690|ref|XP_007009442.1| (Uncharacterized protein TCM_042837 [Theobroma cacao])

HSP 1 Score: 90.1 bits (222), Expect = 1.3e-15
Identity = 41/50 (82.00%), Postives = 48/50 (96.00%), Query Frame = 1 

Query: 4  KNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQENDNEK 54
          K+LLKDKKFWFASFLIAWAAALQGHMM++Q+QDSF+QKFGT NQ ND+E+
Sbjct: 7  KSLLKDKKFWFASFLIAWAAALQGHMMWMQRQDSFRQKFGTLNQSNDDEQ 56

The following BLAST results are available for this feature:
BLAST of CSPI05G17350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI05G17350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0D2VWH7_GOSRA3.0e-1678.43Uncharacterized protein OS=Gossypium raimondii GN=B456_012G069200 PE=4 SV=1[more]
A0A061FNL8_THECC8.8e-1682.00Uncharacterized protein OS=Theobroma cacao GN=TCM_042837 PE=4 SV=1[more]
A0A0B0NNC0_GOSAR1.1e-1576.47Hexose transporter HXT14 OS=Gossypium arboreum GN=F383_17277 PE=4 SV=1[more]
B9T144_RICCO1.7e-1480.77Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0190620 PE=4 SV=1[more]
B9HM53_POPTR2.8e-1476.47Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s05100g PE=4 SV=1[more]
BLAST of CSPI05G17350 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G39500.12.5e-1464.58 unknown protein[more]
BLAST of CSPI05G17350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778703299|ref|XP_011655348.1|2.4e-22100.00PREDICTED: uncharacterized protein LOC101219597 [Cucumis sativus][more]
gi|659127031|ref|XP_008463489.1|1.2e-2198.11PREDICTED: uncharacterized protein LOC103501645 [Cucumis melo][more]
gi|823256278|ref|XP_012460788.1|4.3e-1678.43PREDICTED: uncharacterized protein LOC105780819 [Gossypium raimondii][more]
gi|802672816|ref|XP_012081555.1|5.7e-1680.77PREDICTED: uncharacterized protein LOC105641579 [Jatropha curcas][more]
gi|590563690|ref|XP_007009442.1|1.3e-1582.00Uncharacterized protein TCM_042837 [Theobroma cacao][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G17350.1CSPI05G17350.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI05G17350ClCG09G020150Watermelon (Charleston Gray)cpiwcgB355
CSPI05G17350CsaV3_5G026310Cucumber (Chinese Long) v3cpicucB284
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI05G17350Cucurbita pepo (Zucchini)cpecpiB178
CSPI05G17350Cucurbita pepo (Zucchini)cpecpiB416
CSPI05G17350Cucurbita pepo (Zucchini)cpecpiB445
CSPI05G17350Cucurbita pepo (Zucchini)cpecpiB450
CSPI05G17350Bottle gourd (USVL1VR-Ls)cpilsiB344
CSPI05G17350Bottle gourd (USVL1VR-Ls)cpilsiB351
CSPI05G17350Bottle gourd (USVL1VR-Ls)cpilsiB370
CSPI05G17350Melon (DHL92) v3.6.1cpimedB407
CSPI05G17350Melon (DHL92) v3.6.1cpimedB340
CSPI05G17350Melon (DHL92) v3.6.1cpimedB357
CSPI05G17350Cucumber (Gy14) v2cgybcpiB180
CSPI05G17350Cucumber (Gy14) v2cgybcpiB225
CSPI05G17350Cucumber (Gy14) v2cgybcpiB231
CSPI05G17350Silver-seed gourdcarcpiB0298
CSPI05G17350Silver-seed gourdcarcpiB0721
CSPI05G17350Cucumber (Chinese Long) v3cpicucB279
CSPI05G17350Cucumber (Chinese Long) v3cpicucB293
CSPI05G17350Watermelon (97103) v2cpiwmbB370
CSPI05G17350Watermelon (97103) v2cpiwmbB392
CSPI05G17350Watermelon (97103) v2cpiwmbB416
CSPI05G17350Watermelon (97103) v2cpiwmbB428
CSPI05G17350Wax gourdcpiwgoB466
CSPI05G17350Wax gourdcpiwgoB526
CSPI05G17350Wild cucumber (PI 183967)cpicpiB152
CSPI05G17350Wild cucumber (PI 183967)cpicpiB175
CSPI05G17350Cucumber (Gy14) v1cgycpiB006
CSPI05G17350Cucumber (Gy14) v1cgycpiB056
CSPI05G17350Cucumber (Gy14) v1cgycpiB259
CSPI05G17350Cucurbita maxima (Rimu)cmacpiB305
CSPI05G17350Cucurbita maxima (Rimu)cmacpiB770
CSPI05G17350Cucurbita maxima (Rimu)cmacpiB732
CSPI05G17350Cucurbita maxima (Rimu)cmacpiB763
CSPI05G17350Cucurbita moschata (Rifu)cmocpiB297
CSPI05G17350Cucurbita moschata (Rifu)cmocpiB756
CSPI05G17350Cucurbita moschata (Rifu)cmocpiB724
CSPI05G17350Cucurbita moschata (Rifu)cmocpiB755
CSPI05G17350Cucurbita moschata (Rifu)cmocpiB870
CSPI05G17350Cucumber (Chinese Long) v2cpicuB234
CSPI05G17350Cucumber (Chinese Long) v2cpicuB239
CSPI05G17350Cucumber (Chinese Long) v2cpicuB246
CSPI05G17350Melon (DHL92) v3.5.1cpimeB350
CSPI05G17350Melon (DHL92) v3.5.1cpimeB365
CSPI05G17350Melon (DHL92) v3.5.1cpimeB409
CSPI05G17350Watermelon (Charleston Gray)cpiwcgB364
CSPI05G17350Watermelon (Charleston Gray)cpiwcgB406
CSPI05G17350Watermelon (Charleston Gray)cpiwcgB422
CSPI05G17350Watermelon (97103) v1cpiwmB369
CSPI05G17350Watermelon (97103) v1cpiwmB377
CSPI05G17350Watermelon (97103) v1cpiwmB403
CSPI05G17350Watermelon (97103) v1cpiwmB436