CSPI05G17230 (gene) Wild cucumber (PI 183967)

NameCSPI05G17230
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr5 : 18481075 .. 18482088 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCTTAAACTAATGAGTAAGGAAAACAAAGTGGCCGGGGGGATCCGGCCGCAGCGCTACCTAAGTTGATGCGCATGAATTTGTGGAGGGGTTAAAGGCTTGGCCGATTGTTGACGCTGCTTACTTTGCAGAACTCTTTCGTGCTGGCCTCCCAATATACCCACCCCCAATATCAGTTCCAAACTCTTCCTCTCTCTCTATTGTTTGTATTTATTGTTATTATTATGGTAGTGTTGTTTTTAGATTCATGATAAGGCGGGTTACGATATTTGATTCCTGATTTGTTGAGAAGAGCCTACCTCTACCTTGTACCTGATTTTTTCTAAAAAATTATAAATTGAGTTTTCCTAAGGGATATGCAAGTTAATTCAGGGTGTGCGTTGGAACCTCCCAATTAGGCAATTGCTCACTCTCTGATCTCTCAATTAAAGTAACTTCTCGCCTTACCACTTTAATTCCACCTTATAAGTGGGGGATTATTGCCCTTTGCTTTGTTCACTTTCCTTCCTAAATCGATACGCTTTGATGCCTGCTGGGCCTGCTGCTGCACAACTTTTAACTCACCTACAGGTTATATTATAAATTGGAAGTGAAGAAAACTTTATTCTTACTAGTTTCTTATTTGTCTCCTATATTCAATGCAATGGTAGTGTGGTATAAGTTCGGAAGAAAATTAAGAAGGGAACAAACATTGGCACAAAACAGAGCATAAGTTTCAGATAATAATAGCTATGAAACTTGAACATACGAGGAGGAAGAAGAGAAAAGCAAAAACGAGGAGGAAGAAATAGAAAACGGAGAGGAAAGGGGAGAAGAAAATACTAAGGGGAAAGGGAAAGAAGAAAACATGGAGTGGAATGGAAAAGAAGAAGAAAACGCAGAGAAGAAGGGGGAAAGAGAAAATAAAGAGAGGAAAGGGAGAGAACAAAGAGAGGAAAGGGAAAGAAGGGAAAGAGAAAACAAAGAGAGGAAGGGGAAAGTAAAAAAGAAGGATAGAGGAAAACTGGGGTATTAA

mRNA sequence

ATGGAGTGGAATGGAAAAGAAGAAGAAAACGCAGAGAAGAAGGGGGAAAGAGAAAATAAAGAGAGGAAAGGGAGAGAACAAAGAGAGGAAAGGGAAAGAAGGGAAAGAGAAAACAAAGAGAGGAAGGGGAAAGTAAAAAAGAAGGATAGAGGAAAACTGGGGTATTAA

Coding sequence (CDS)

ATGGAGTGGAATGGAAAAGAAGAAGAAAACGCAGAGAAGAAGGGGGAAAGAGAAAATAAAGAGAGGAAAGGGAGAGAACAAAGAGAGGAAAGGGAAAGAAGGGAAAGAGAAAACAAAGAGAGGAAGGGGAAAGTAAAAAAGAAGGATAGAGGAAAACTGGGGTATTAA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G17230.1CSPI05G17230.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 6..42
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI05G17230Cucumber (Chinese Long) v2cpicuB234
CSPI05G17230Cucumber (Chinese Long) v2cpicuB239
CSPI05G17230Cucumber (Chinese Long) v2cpicuB246
CSPI05G17230Melon (DHL92) v3.5.1cpimeB350
CSPI05G17230Melon (DHL92) v3.5.1cpimeB365
CSPI05G17230Melon (DHL92) v3.5.1cpimeB409
CSPI05G17230Watermelon (Charleston Gray)cpiwcgB355
CSPI05G17230Watermelon (Charleston Gray)cpiwcgB364
CSPI05G17230Watermelon (Charleston Gray)cpiwcgB406
CSPI05G17230Watermelon (97103) v1cpiwmB369
CSPI05G17230Watermelon (97103) v1cpiwmB377
CSPI05G17230Watermelon (97103) v1cpiwmB436
CSPI05G17230Cucurbita pepo (Zucchini)cpecpiB178
CSPI05G17230Cucurbita pepo (Zucchini)cpecpiB416
CSPI05G17230Cucurbita pepo (Zucchini)cpecpiB445
CSPI05G17230Cucurbita pepo (Zucchini)cpecpiB446
CSPI05G17230Cucurbita pepo (Zucchini)cpecpiB450
CSPI05G17230Bottle gourd (USVL1VR-Ls)cpilsiB344
CSPI05G17230Bottle gourd (USVL1VR-Ls)cpilsiB351
CSPI05G17230Bottle gourd (USVL1VR-Ls)cpilsiB370
CSPI05G17230Melon (DHL92) v3.6.1cpimedB407
CSPI05G17230Melon (DHL92) v3.6.1cpimedB340
CSPI05G17230Melon (DHL92) v3.6.1cpimedB357
CSPI05G17230Cucumber (Gy14) v2cgybcpiB180
CSPI05G17230Cucumber (Gy14) v2cgybcpiB225
CSPI05G17230Cucumber (Gy14) v2cgybcpiB231
CSPI05G17230Silver-seed gourdcarcpiB0298
CSPI05G17230Silver-seed gourdcarcpiB0720
CSPI05G17230Silver-seed gourdcarcpiB0721
CSPI05G17230Cucumber (Chinese Long) v3cpicucB279
CSPI05G17230Cucumber (Chinese Long) v3cpicucB284
CSPI05G17230Cucumber (Chinese Long) v3cpicucB293
CSPI05G17230Watermelon (97103) v2cpiwmbB370
CSPI05G17230Watermelon (97103) v2cpiwmbB392
CSPI05G17230Watermelon (97103) v2cpiwmbB428
CSPI05G17230Wax gourdcpiwgoB466
CSPI05G17230Wax gourdcpiwgoB479
CSPI05G17230Wax gourdcpiwgoB526
CSPI05G17230Wild cucumber (PI 183967)cpicpiB152
CSPI05G17230Wild cucumber (PI 183967)cpicpiB175
CSPI05G17230Cucumber (Gy14) v1cgycpiB056
CSPI05G17230Cucumber (Gy14) v1cgycpiB259
CSPI05G17230Cucurbita maxima (Rimu)cmacpiB305
CSPI05G17230Cucurbita maxima (Rimu)cmacpiB770
CSPI05G17230Cucurbita maxima (Rimu)cmacpiB732
CSPI05G17230Cucurbita maxima (Rimu)cmacpiB763
CSPI05G17230Cucurbita maxima (Rimu)cmacpiB765
CSPI05G17230Cucurbita moschata (Rifu)cmocpiB297
CSPI05G17230Cucurbita moschata (Rifu)cmocpiB756
CSPI05G17230Cucurbita moschata (Rifu)cmocpiB759
CSPI05G17230Cucurbita moschata (Rifu)cmocpiB724
CSPI05G17230Cucurbita moschata (Rifu)cmocpiB755
CSPI05G17230Cucurbita moschata (Rifu)cmocpiB870