CSPI05G16660 (gene) Wild cucumber (PI 183967)

NameCSPI05G16660
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr5 : 17964469 .. 17964993 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGTAGGAAATCATAATTTCATTCAACACACATGCAACAAAGTTGAATCTGATTTGAAGGATCTTTGCATTTCTGTGGTAAGTTCTAACCCTAATGATTATTTAAAGTCAAATTTGACAGGACTTCTCACCATCTTCGTCAATCAAACACTTGGTGTTGTCATCGATGACCAATTGTACCTTTCAAATCAAACGTCAAATGGACAATTGGATAATCGGACGCAACAAATCTTTACGATCTGCATGATGCAGTATCAAATGAGTAAAGATTCTTTACAAGCTGTGTTAGAAGAGCAGTTGTTGAAGCAACAAATTAGTGGAGATTTGGATTTTGATTTGACACAAATTGTTAACTATTTACAGCTTTGTGAGATTAGTTTCCAAGGATTTGTAGAAGAACCCTCAACTTGGAAGTCGTTATATGATTATGTGAGCTCTCTCTTAGATCTTTCATTAGAAATCACTAATCTCATTAAATGTAATCATATACAAGCTTGTTTTGGCCAGGCCATTATTTCTTAA

mRNA sequence

ATGATTGTAGGAAATCATAATTTCATTCAACACACATGCAACAAAGTTGAATCTGATTTGAAGGATCTTTGCATTTCTGTGGTAAGTTCTAACCCTAATGATTATTTAAAGTCAAATTTGACAGGACTTCTCACCATCTTCGTCAATCAAACACTTGGTGTTGTCATCGATGACCAATTGTACCTTTCAAATCAAACGTCAAATGGACAATTGGATAATCGGACGCAACAAATCTTTACGATCTGCATGATGCAGTATCAAATGAGTAAAGATTCTTTACAAGCTGTGTTAGAAGAGCAGTTGTTGAAGCAACAAATTAGTGGAGATTTGGATTTTGATTTGACACAAATTGTTAACTATTTACAGCTTTGTGAGATTAGTTTCCAAGGATTTGTAGAAGAACCCTCAACTTGGAAGTCGTTATATGATTATGTGAGCTCTCTCTTAGATCTTTCATTAGAAATCACTAATCTCATTAAATGTAATCATATACAAGCTTGTTTTGGCCAGGCCATTATTTCTTAA

Coding sequence (CDS)

ATGATTGTAGGAAATCATAATTTCATTCAACACACATGCAACAAAGTTGAATCTGATTTGAAGGATCTTTGCATTTCTGTGGTAAGTTCTAACCCTAATGATTATTTAAAGTCAAATTTGACAGGACTTCTCACCATCTTCGTCAATCAAACACTTGGTGTTGTCATCGATGACCAATTGTACCTTTCAAATCAAACGTCAAATGGACAATTGGATAATCGGACGCAACAAATCTTTACGATCTGCATGATGCAGTATCAAATGAGTAAAGATTCTTTACAAGCTGTGTTAGAAGAGCAGTTGTTGAAGCAACAAATTAGTGGAGATTTGGATTTTGATTTGACACAAATTGTTAACTATTTACAGCTTTGTGAGATTAGTTTCCAAGGATTTGTAGAAGAACCCTCAACTTGGAAGTCGTTATATGATTATGTGAGCTCTCTCTTAGATCTTTCATTAGAAATCACTAATCTCATTAAATGTAATCATATACAAGCTTGTTTTGGCCAGGCCATTATTTCTTAA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006501Pectinesterase_inhib_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004857enzyme inhibitor activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004857 enzyme inhibitor activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G16660.1CSPI05G16660.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006501Pectinesterase inhibitor domainGENE3DG3DSA:1.20.140.40coord: 6..159
score: 1.1
IPR006501Pectinesterase inhibitor domainPFAMPF04043PMEIcoord: 7..151
score: 6.2
IPR006501Pectinesterase inhibitor domainTIGRFAMsTIGR01614TIGR01614coord: 5..157
score: 7.7
IPR006501Pectinesterase inhibitor domainunknownSSF101148Plant invertase/pectin methylesterase inhibitorcoord: 6..159
score: 5.89

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None