CSPI05G16530 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G16530
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Proteinase inhibitor I25, cystatin
Location	Chr5 : 17817230 .. 17817946 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGATTTTCACCTATTAATATGATATCCTTATCCATTAATTATTTCAAAGATTATCAATTTCTAAGGTTCAACACCTATAAATAATATCCAACTCCTTCCCATTATTATAAAGCAAAACCAAGTCTTAAGAAAATATATATCTATCTATCTTGGTATATATTAGCAAAAATGAGTTCTACTGGTGTTGATCCCCTGGTGCCAGTCAGCAAACTTCCGGACTATGATACGGTGCCAATTAAGGATGTTGATAGCGAGGAGATACAAGGAATTGGAGGGATGGCAGTGAGAAAGCATAATGAAACAAGTACAGGAGAAAATCTGGAGTTTGTGAAGGTGATAAATGGGTTGGAAAAGGGACGAAGGGGTTTCCAAATAGTTTACACTCTTGTCTTATCAGCTAAAAACTCACTTGGAATTGTTTGGACTTACAAAGCTAAAGTAATTTTCAATAATCGGGCTGCAGTACGTTTCCCAGAGTTTGAAGCTGTACTTCCTGAGAATGGAAAATAAAGCTGGACTCTCATCTACTCTTACCACCCAACAATACGCAAACTTTTATGCAATGAAATAAAATAAATAAAGCAATTATGCTTCATTATGATCTTTATTAATTTATAGTCTCTTGTCTACTGATATGTGCGGTGTTTTTTCTTCTTCTCTTCCCCTTCCATTCTCTCCAATATTTGGTATCCTAATTGGTATTTATTTCATTAACA

mRNA sequence

ATGAGTTCTACTGGTGTTGATCCCCTGGTGCCAGTCAGCAAACTTCCGGACTATGATACGGTGCCAATTAAGGATGTTGATAGCGAGGAGATACAAGGAATTGGAGGGATGGCAGTGAGAAAGCATAATGAAACAAGTACAGGAGAAAATCTGGAGTTTGTGAAGGTGATAAATGGGTTGGAAAAGGGACGAAGGGGTTTCCAAATAGTTTACACTCTTGTCTTATCAGCTAAAAACTCACTTGGAATTGTTTGGACTTACAAAGCTAAAGTAATTTTCAATAATCGGGCTGCAGTACGTTTCCCAGAGTTTGAAGCTGTACTTCCTGAGAATGGAAAATAA

Coding sequence (CDS)

ATGAGTTCTACTGGTGTTGATCCCCTGGTGCCAGTCAGCAAACTTCCGGACTATGATACGGTGCCAATTAAGGATGTTGATAGCGAGGAGATACAAGGAATTGGAGGGATGGCAGTGAGAAAGCATAATGAAACAAGTACAGGAGAAAATCTGGAGTTTGTGAAGGTGATAAATGGGTTGGAAAAGGGACGAAGGGGTTTCCAAATAGTTTACACTCTTGTCTTATCAGCTAAAAACTCACTTGGAATTGTTTGGACTTACAAAGCTAAAGTAATTTTCAATAATCGGGCTGCAGTACGTTTCCCAGAGTTTGAAGCTGTACTTCCTGAGAATGGAAAATAA

Homology

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BLAST of CSPI05G16530 vs. TrEMBL
Match: A0A0A0KNL2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G487700 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.8e-55
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 1


Query: 1   MSSTGVDPLVPVSKLPDYDTVPIKDVDSEEIQGIGGMAVRKHNETSTGENLEFVKVINGL 60
           MSSTGVDPLVPVSKLPDYDTVPIKDVDSEEIQGIGGMAVR HNETSTGENLEFVKVINGL
Sbjct: 1   MSSTGVDPLVPVSKLPDYDTVPIKDVDSEEIQGIGGMAVRMHNETSTGENLEFVKVINGL 60

Query: 61  EKGRRGFQIVYTLVLSAKNSLGIVWTYKAKVIFNNRAAVRFPEFEAVLPENGK 114
           EKGRRGFQIVYTLVLSAKNSLGIVWTYKAKVIFNNRAAVR PEFEAVLPENGK
Sbjct: 61  EKGRRGFQIVYTLVLSAKNSLGIVWTYKAKVIFNNRAAVRLPEFEAVLPENGK 113

[Close]

BLAST of CSPI05G16530 vs. TrEMBL
Match: A0A0A0KRZ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G487690 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.5e-30
Identity = 72/99 (72.73%), Postives = 81/99 (81.82%), Query Frame = 1


Query: 15  LPDYD-TVPIKDVDSEEIQGIGGMAVRKHNETSTGENLEFVKVINGLEKGRRGFQIVYTL 74
           +P  D  VPIKDVDSEEI+G G  AV +HNE +TGENLEFVKVINGLE+GRRGF+I +TL
Sbjct: 8   IPKVDPAVPIKDVDSEEIRGFGEFAVSEHNE-ATGENLEFVKVINGLEQGRRGFRIDFTL 67

Query: 75  VLSAKNSLGIVWTYKAKVIFNNRAAVRFPEFEAVLPENG 113
           VLSAKNS+GI+WTYK KV  N RA VR  EFEAVL ENG
Sbjct: 68  VLSAKNSIGIIWTYKVKVFLNQRAGVRLLEFEAVLNENG 105

[Close]

BLAST of CSPI05G16530 vs. TrEMBL
Match: A0A0A0L191_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G508520 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-06
Identity = 40/99 (40.40%), Postives = 58/99 (58.59%), Query Frame = 1


Query: 22  PIKDVDSEEIQGIGGMAVRKHNETSTGENLEFVKVINGLEKGR---RGFQ--IVYTLVLS 81
           PI D++   +Q IG +AV  H+  + GE L+FV+V+NGL+  +    GF   I+Y LVL 
Sbjct: 12  PIIDINDPHVQIIGKLAVEDHDSHNPGEKLKFVRVVNGLKSDKYIGPGFTEVILYHLVLE 71

Query: 82  AKNSLGIVWTYKAKV--IFNNRAAVR--FPEFEAVLPEN 112
           AK +  I WTY  K+  +++    +R  F  FE VLP N
Sbjct: 72  AKTNEEINWTYATKLEKVYSG-CLIRHVFLSFEPVLPYN 109

[Close]

BLAST of CSPI05G16530 vs. TrEMBL
Match: A0A0A0KZ98_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G508510 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.5e-06
Identity = 37/95 (38.95%), Postives = 54/95 (56.84%), Query Frame = 1


Query: 22  PIKDVDSEEIQGIGGMAVRKHNETSTGENLEFVKVINGLEKGR---RGFQ--IVYTLVLS 81
           PI D++   +Q +G +AV      ++GE L+FV+V+NGL+  +    GF   I+Y LVL 
Sbjct: 12  PIIDINDPHVQALGELAVENLYSKNSGEKLKFVRVVNGLKSDKYIGPGFTEVILYHLVLE 71

Query: 82  AKNSLGIVWTYKAKVIFNNRAAVR--FPEFEAVLP 110
           AK +  I WTY  K+   +   +R  F  FE VLP
Sbjct: 72  AKTNEEINWTYATKLEEVSGGLIRHVFLSFEPVLP 106

[Close]

BLAST of CSPI05G16530 vs. NCBI nr
Match: gi|700196016|gb|KGN51193.1| (hypothetical protein Csa_5G487700 [Cucumis sativus])

HSP 1 Score: 223.0 bits (567), Expect = 2.6e-55
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 1


Query: 1   MSSTGVDPLVPVSKLPDYDTVPIKDVDSEEIQGIGGMAVRKHNETSTGENLEFVKVINGL 60
           MSSTGVDPLVPVSKLPDYDTVPIKDVDSEEIQGIGGMAVR HNETSTGENLEFVKVINGL
Sbjct: 1   MSSTGVDPLVPVSKLPDYDTVPIKDVDSEEIQGIGGMAVRMHNETSTGENLEFVKVINGL 60

Query: 61  EKGRRGFQIVYTLVLSAKNSLGIVWTYKAKVIFNNRAAVRFPEFEAVLPENGK 114
           EKGRRGFQIVYTLVLSAKNSLGIVWTYKAKVIFNNRAAVR PEFEAVLPENGK
Sbjct: 61  EKGRRGFQIVYTLVLSAKNSLGIVWTYKAKVIFNNRAAVRLPEFEAVLPENGK 113

[Close]

BLAST of CSPI05G16530 vs. NCBI nr
Match: gi|700196015|gb|KGN51192.1| (hypothetical protein Csa_5G487690 [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 5.0e-30
Identity = 72/99 (72.73%), Postives = 81/99 (81.82%), Query Frame = 1


Query: 15  LPDYD-TVPIKDVDSEEIQGIGGMAVRKHNETSTGENLEFVKVINGLEKGRRGFQIVYTL 74
           +P  D  VPIKDVDSEEI+G G  AV +HNE +TGENLEFVKVINGLE+GRRGF+I +TL
Sbjct: 8   IPKVDPAVPIKDVDSEEIRGFGEFAVSEHNE-ATGENLEFVKVINGLEQGRRGFRIDFTL 67

Query: 75  VLSAKNSLGIVWTYKAKVIFNNRAAVRFPEFEAVLPENG 113
           VLSAKNS+GI+WTYK KV  N RA VR  EFEAVL ENG
Sbjct: 68  VLSAKNSIGIIWTYKVKVFLNQRAGVRLLEFEAVLNENG 105

[Close]

BLAST of CSPI05G16530 vs. NCBI nr
Match: gi|700199666|gb|KGN54824.1| (hypothetical protein Csa_4G508520 [Cucumis sativus])

HSP 1 Score: 60.8 bits (146), Expect = 1.7e-06
Identity = 40/99 (40.40%), Postives = 58/99 (58.59%), Query Frame = 1


Query: 22  PIKDVDSEEIQGIGGMAVRKHNETSTGENLEFVKVINGLEKGR---RGFQ--IVYTLVLS 81
           PI D++   +Q IG +AV  H+  + GE L+FV+V+NGL+  +    GF   I+Y LVL 
Sbjct: 12  PIIDINDPHVQIIGKLAVEDHDSHNPGEKLKFVRVVNGLKSDKYIGPGFTEVILYHLVLE 71

Query: 82  AKNSLGIVWTYKAKV--IFNNRAAVR--FPEFEAVLPEN 112
           AK +  I WTY  K+  +++    +R  F  FE VLP N
Sbjct: 72  AKTNEEINWTYATKLEKVYSG-CLIRHVFLSFEPVLPYN 109

[Close]

BLAST of CSPI05G16530 vs. NCBI nr
Match: gi|700199665|gb|KGN54823.1| (hypothetical protein Csa_4G508510 [Cucumis sativus])

HSP 1 Score: 59.3 bits (142), Expect = 5.0e-06
Identity = 37/95 (38.95%), Postives = 54/95 (56.84%), Query Frame = 1


Query: 22  PIKDVDSEEIQGIGGMAVRKHNETSTGENLEFVKVINGLEKGR---RGFQ--IVYTLVLS 81
           PI D++   +Q +G +AV      ++GE L+FV+V+NGL+  +    GF   I+Y LVL 
Sbjct: 12  PIIDINDPHVQALGELAVENLYSKNSGEKLKFVRVVNGLKSDKYIGPGFTEVILYHLVLE 71

Query: 82  AKNSLGIVWTYKAKVIFNNRAAVR--FPEFEAVLP 110
           AK +  I WTY  K+   +   +R  F  FE VLP
Sbjct: 72  AKTNEEINWTYATKLEEVSGGLIRHVFLSFEPVLP 106

The following BLAST results are available for this feature:

BLAST of CSPI05G16530 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI05G16530 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNL2_CUCSA	1.8e-55	98.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G487700 PE=4 SV=1	[more]
A0A0A0KRZ8_CUCSA	3.5e-30	72.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G487690 PE=4 SV=1	[more]
A0A0A0L191_CUCSA	1.2e-06	40.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G508520 PE=4 SV=1	[more]
A0A0A0KZ98_CUCSA	3.5e-06	38.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G508510 PE=4 SV=1	[more]

BLAST of CSPI05G16530 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI05G16530 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700196016\|gb\|KGN51193.1\|	2.6e-55	98.23	hypothetical protein Csa_5G487700 [Cucumis sativus]	[more]
gi\|700196015\|gb\|KGN51192.1\|	5.0e-30	72.73	hypothetical protein Csa_5G487690 [Cucumis sativus]	[more]
gi\|700199666\|gb\|KGN54824.1\|	1.7e-06	40.40	hypothetical protein Csa_4G508520 [Cucumis sativus]	[more]
gi\|700199665\|gb\|KGN54823.1\|	5.0e-06	38.95	hypothetical protein Csa_4G508510 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR020381	Proteinase inhibitor I25, cystatin, conserved region

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G16530.1	CSPI05G16530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020381	Proteinase inhibitor I25, cystatin, conserved region	PRODOM	PD001231		coord: 31..94 score: 0
IPR020381	Proteinase inhibitor I25, cystatin, conserved region	PFAM	PF16845	SQAPI	coord: 23..96 score: 2.1
None	No IPR available	GENE3D	G3DSA:3.10.450.10		coord: 22..91 score: 1.
None	No IPR available	unknown	SSF54403	Cystatin/monellin	coord: 22..94 score: 8.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI05G16530	Csa5G487690	Cucumber (Chinese Long) v2	cpicuB239

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI05G16530	Watermelon (97103) v2	cpiwmbB428
CSPI05G16530	Wax gourd	cpiwgoB475
CSPI05G16530	Cucumber (Gy14) v1	cgycpiB415
CSPI05G16530	Cucurbita maxima (Rimu)	cmacpiB192
CSPI05G16530	Cucurbita maxima (Rimu)	cmacpiB763
CSPI05G16530	Cucurbita maxima (Rimu)	cmacpiB813
CSPI05G16530	Cucurbita moschata (Rifu)	cmocpiB175
CSPI05G16530	Cucurbita moschata (Rifu)	cmocpiB798
CSPI05G16530	Melon (DHL92) v3.5.1	cpimeB350
CSPI05G16530	Watermelon (Charleston Gray)	cpiwcgB355
CSPI05G16530	Watermelon (97103) v1	cpiwmB369
CSPI05G16530	Cucurbita pepo (Zucchini)	cpecpiB115
CSPI05G16530	Cucurbita pepo (Zucchini)	cpecpiB445
CSPI05G16530	Cucurbita pepo (Zucchini)	cpecpiB836
CSPI05G16530	Bottle gourd (USVL1VR-Ls)	cpilsiB351
CSPI05G16530	Melon (DHL92) v3.6.1	cpimedB340
CSPI05G16530	Cucumber (Gy14) v2	cgybcpiB225
CSPI05G16530	Silver-seed gourd	carcpiB1100
CSPI05G16530	Cucumber (Chinese Long) v3	cpicucB284